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Genes within 1Mb (chr12:103139252:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 657508 sc-eQTL 3.39e-01 -0.0375 0.0391 0.397 B L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 5.93e-01 0.046 0.0859 0.397 B L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.99e-01 0.0101 0.0801 0.397 B L1
ENSG00000120837 NFYB -998989 sc-eQTL 9.01e-01 -0.0096 0.0773 0.397 B L1
ENSG00000139372 TDG -826570 sc-eQTL 5.87e-01 -0.042 0.0771 0.397 B L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.02e-02 -0.104 0.0479 0.397 B L1
ENSG00000179088 C12orf42 -356758 sc-eQTL 3.31e-01 0.0702 0.0721 0.397 B L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.92e-01 0.0573 0.0831 0.397 B L1
ENSG00000281344 HELLPAR 941667 sc-eQTL 1.39e-01 -0.112 0.0751 0.397 B L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 5.65e-01 0.042 0.0729 0.397 CD4T L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 4.47e-01 -0.0557 0.0732 0.397 CD4T L1
ENSG00000120837 NFYB -998989 sc-eQTL 6.70e-01 0.0269 0.063 0.397 CD4T L1
ENSG00000139372 TDG -826570 sc-eQTL 9.35e-01 -0.00527 0.0649 0.397 CD4T L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.17e-01 0.0351 0.0701 0.397 CD4T L1
ENSG00000179088 C12orf42 -356758 sc-eQTL 9.22e-01 -0.00795 0.0809 0.397 CD4T L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.29e-01 -0.0151 0.0697 0.397 CD4T L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 8.95e-01 0.00986 0.0743 0.397 CD8T L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 2.97e-01 -0.0837 0.0801 0.397 CD8T L1
ENSG00000120837 NFYB -998989 sc-eQTL 6.14e-01 -0.038 0.0753 0.397 CD8T L1
ENSG00000139372 TDG -826570 sc-eQTL 9.14e-01 0.00735 0.0678 0.397 CD8T L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.33e-01 0.0246 0.0718 0.397 CD8T L1
ENSG00000179088 C12orf42 -356758 sc-eQTL 1.06e-01 0.14 0.0863 0.397 CD8T L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.80e-01 -0.0125 0.0827 0.397 CD8T L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 3.42e-01 0.085 0.0893 0.399 DC L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.12e-01 0.0355 0.0959 0.399 DC L1
ENSG00000120837 NFYB -998989 sc-eQTL 2.22e-01 0.105 0.0856 0.399 DC L1
ENSG00000139372 TDG -826570 sc-eQTL 7.86e-01 0.0239 0.0878 0.399 DC L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 2.35e-01 -0.0684 0.0575 0.399 DC L1
ENSG00000179088 C12orf42 -356758 sc-eQTL 4.14e-01 0.0617 0.0754 0.399 DC L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.40e-01 -0.0184 0.0909 0.399 DC L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 4.17e-01 -0.0757 0.0932 0.397 Mono L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 9.01e-01 -0.0107 0.0859 0.397 Mono L1
ENSG00000120837 NFYB -998989 sc-eQTL 6.47e-01 -0.0368 0.0803 0.397 Mono L1
ENSG00000139372 TDG -826570 sc-eQTL 7.80e-01 0.0173 0.0617 0.397 Mono L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.54e-01 0.0366 0.0617 0.397 Mono L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.21e-01 -0.0969 0.079 0.397 Mono L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 2.05e-01 -0.106 0.083 0.399 NK L1
ENSG00000120837 NFYB -998989 sc-eQTL 7.49e-01 0.0246 0.0768 0.399 NK L1
ENSG00000139372 TDG -826570 sc-eQTL 7.15e-02 -0.129 0.071 0.399 NK L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 9.83e-01 0.00168 0.0791 0.399 NK L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.31e-01 0.0272 0.079 0.399 NK L1
ENSG00000017427 IGF1 657508 sc-eQTL 9.23e-01 -0.00279 0.0288 0.397 Other_T L1
ENSG00000111696 NT5DC3 -701982 sc-eQTL 3.96e-01 -0.0701 0.0824 0.397 Other_T L1
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.82e-01 0.0233 0.0841 0.397 Other_T L1
ENSG00000120837 NFYB -998989 sc-eQTL 7.04e-01 -0.029 0.0763 0.397 Other_T L1
ENSG00000139372 TDG -826570 sc-eQTL 7.50e-01 -0.0234 0.0733 0.397 Other_T L1
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.65e-01 -0.0382 0.0663 0.397 Other_T L1
ENSG00000179088 C12orf42 -356758 sc-eQTL 4.73e-01 0.0599 0.0832 0.397 Other_T L1
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.18e-01 0.0311 0.0858 0.397 Other_T L1
ENSG00000281344 HELLPAR 941667 sc-eQTL 3.25e-01 0.067 0.0679 0.397 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 657508 sc-eQTL 2.95e-01 0.0189 0.018 0.39 B_Activated L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 6.17e-01 -0.0419 0.0836 0.39 B_Activated L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.98e-01 -0.0118 0.092 0.39 B_Activated L2
ENSG00000120837 NFYB -998989 sc-eQTL 5.85e-01 -0.0543 0.0991 0.39 B_Activated L2
ENSG00000139372 TDG -826570 sc-eQTL 1.44e-01 -0.145 0.0985 0.39 B_Activated L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 9.73e-01 -0.00369 0.107 0.39 B_Activated L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 2.66e-02 -0.18 0.0806 0.39 B_Activated L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.94e-01 -0.0765 0.0896 0.39 B_Activated L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 9.34e-01 0.00604 0.0728 0.39 B_Activated L2
ENSG00000017427 IGF1 657508 sc-eQTL 6.44e-01 -0.0181 0.0391 0.395 B_Intermediate L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 9.74e-01 0.00283 0.088 0.395 B_Intermediate L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 4.73e-01 -0.066 0.0919 0.395 B_Intermediate L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.81e-01 0.069 0.0977 0.395 B_Intermediate L2
ENSG00000139372 TDG -826570 sc-eQTL 4.53e-01 -0.0739 0.0983 0.395 B_Intermediate L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.61e-01 0.0513 0.0879 0.395 B_Intermediate L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 8.44e-02 0.148 0.0854 0.395 B_Intermediate L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.74e-01 -0.0667 0.093 0.395 B_Intermediate L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 1.16e-01 -0.142 0.0901 0.395 B_Intermediate L2
ENSG00000017427 IGF1 657508 sc-eQTL 5.89e-01 0.0191 0.0352 0.401 B_Memory L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 9.59e-01 -0.00463 0.0889 0.401 B_Memory L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 5.19e-01 0.0618 0.0957 0.401 B_Memory L2
ENSG00000120837 NFYB -998989 sc-eQTL 7.23e-01 0.0335 0.0946 0.401 B_Memory L2
ENSG00000139372 TDG -826570 sc-eQTL 2.49e-01 -0.111 0.0962 0.401 B_Memory L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 1.09e-01 -0.136 0.0848 0.401 B_Memory L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 1.36e-01 0.131 0.0877 0.401 B_Memory L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.09e-01 -0.0776 0.0939 0.401 B_Memory L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 2.97e-01 -0.0851 0.0814 0.401 B_Memory L2
ENSG00000017427 IGF1 657508 sc-eQTL 5.20e-01 0.0319 0.0496 0.397 B_Naive1 L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 3.45e-02 0.186 0.0873 0.397 B_Naive1 L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.65e-01 -0.0165 0.0967 0.397 B_Naive1 L2
ENSG00000120837 NFYB -998989 sc-eQTL 7.55e-01 -0.0287 0.0919 0.397 B_Naive1 L2
ENSG00000139372 TDG -826570 sc-eQTL 6.46e-01 0.0392 0.0852 0.397 B_Naive1 L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 1.27e-01 -0.111 0.0723 0.397 B_Naive1 L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 5.83e-01 0.0517 0.0941 0.397 B_Naive1 L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.23e-01 0.0745 0.0929 0.397 B_Naive1 L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 3.31e-01 0.0865 0.0887 0.397 B_Naive1 L2
ENSG00000017427 IGF1 657508 sc-eQTL 6.61e-01 0.0195 0.0442 0.399 B_Naive2 L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 9.31e-01 -0.0082 0.0949 0.399 B_Naive2 L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 6.05e-02 0.188 0.0994 0.399 B_Naive2 L2
ENSG00000120837 NFYB -998989 sc-eQTL 9.00e-01 -0.0122 0.0972 0.399 B_Naive2 L2
ENSG00000139372 TDG -826570 sc-eQTL 8.38e-01 -0.0182 0.0888 0.399 B_Naive2 L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.46e-02 -0.16 0.0895 0.399 B_Naive2 L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 3.84e-01 0.0817 0.0936 0.399 B_Naive2 L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 1.09e-01 0.158 0.0982 0.399 B_Naive2 L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 6.94e-01 -0.0341 0.0864 0.399 B_Naive2 L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 6.70e-01 0.0351 0.0821 0.389 CD4_CTL L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.39e-02 0.161 0.0926 0.389 CD4_CTL L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.84e-01 -0.0378 0.0928 0.389 CD4_CTL L2
ENSG00000139372 TDG -826570 sc-eQTL 3.70e-01 -0.0874 0.0974 0.389 CD4_CTL L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 4.02e-01 0.0695 0.0827 0.389 CD4_CTL L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 6.30e-01 0.0409 0.0847 0.389 CD4_CTL L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.05e-01 -0.116 0.0913 0.389 CD4_CTL L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 3.57e-01 0.0695 0.0754 0.397 CD4_Naive L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 1.83e-01 -0.105 0.0783 0.397 CD4_Naive L2
ENSG00000120837 NFYB -998989 sc-eQTL 3.01e-01 0.0699 0.0673 0.397 CD4_Naive L2
ENSG00000139372 TDG -826570 sc-eQTL 6.36e-01 -0.0324 0.0683 0.397 CD4_Naive L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.28e-01 0.0338 0.0696 0.397 CD4_Naive L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 7.79e-01 -0.0235 0.0837 0.397 CD4_Naive L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.95e-01 0.0101 0.0763 0.397 CD4_Naive L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 6.89e-01 -0.035 0.0872 0.397 CD4_TCM L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.81e-01 -0.0139 0.0927 0.397 CD4_TCM L2
ENSG00000120837 NFYB -998989 sc-eQTL 9.80e-01 -0.00204 0.0833 0.397 CD4_TCM L2
ENSG00000139372 TDG -826570 sc-eQTL 8.52e-01 -0.0141 0.0754 0.397 CD4_TCM L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.33e-01 -0.0355 0.0743 0.397 CD4_TCM L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 8.73e-01 -0.0138 0.0862 0.397 CD4_TCM L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 6.74e-01 0.0359 0.0852 0.397 CD4_TCM L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 8.43e-01 -0.0186 0.0938 0.397 CD4_TEM L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 2.99e-01 -0.0995 0.0955 0.397 CD4_TEM L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.53e-01 -0.041 0.0912 0.397 CD4_TEM L2
ENSG00000139372 TDG -826570 sc-eQTL 4.85e-01 -0.0632 0.0903 0.397 CD4_TEM L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.92e-01 0.0769 0.0896 0.397 CD4_TEM L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 3.76e-01 -0.0828 0.0933 0.397 CD4_TEM L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.17e-01 0.0906 0.0903 0.397 CD4_TEM L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 4.85e-01 0.0577 0.0826 0.397 CD8_CTL L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 9.86e-01 -0.00164 0.0933 0.397 CD8_CTL L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.57e-02 -0.161 0.0873 0.397 CD8_CTL L2
ENSG00000139372 TDG -826570 sc-eQTL 7.85e-01 -0.0239 0.0875 0.397 CD8_CTL L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.56e-01 0.0239 0.0768 0.397 CD8_CTL L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 6.64e-01 0.0393 0.0903 0.397 CD8_CTL L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.17e-01 0.103 0.0831 0.397 CD8_CTL L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.95e-01 0.0224 0.0859 0.397 CD8_Naive L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 6.30e-01 -0.0454 0.0942 0.397 CD8_Naive L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.90e-01 -0.0602 0.0871 0.397 CD8_Naive L2
ENSG00000139372 TDG -826570 sc-eQTL 5.47e-01 0.0472 0.0782 0.397 CD8_Naive L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 4.48e-01 -0.0566 0.0744 0.397 CD8_Naive L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 2.89e-01 0.0946 0.089 0.397 CD8_Naive L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.08e-01 -0.0324 0.0865 0.397 CD8_Naive L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.82e-01 -0.0237 0.0855 0.398 CD8_TCM L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.15e-01 -0.0349 0.0952 0.398 CD8_TCM L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.04e-01 0.0801 0.0957 0.398 CD8_TCM L2
ENSG00000139372 TDG -826570 sc-eQTL 8.94e-01 -0.0126 0.0945 0.398 CD8_TCM L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.15e-01 0.0586 0.0898 0.398 CD8_TCM L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 4.15e-01 0.072 0.0882 0.398 CD8_TCM L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.71e-01 0.108 0.0975 0.398 CD8_TCM L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.93e-02 -0.155 0.0879 0.39 CD8_TEM L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 9.90e-01 0.00125 0.0963 0.39 CD8_TEM L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.51e-02 -0.184 0.091 0.39 CD8_TEM L2
ENSG00000139372 TDG -826570 sc-eQTL 4.42e-02 -0.197 0.0974 0.39 CD8_TEM L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.55e-01 0.0848 0.0916 0.39 CD8_TEM L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 6.17e-01 0.0462 0.0921 0.39 CD8_TEM L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 9.21e-01 0.00941 0.0944 0.39 CD8_TEM L2
ENSG00000017427 IGF1 657508 sc-eQTL 6.99e-01 0.0126 0.0327 0.392 MAIT L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 6.58e-02 0.167 0.0904 0.392 MAIT L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 2.76e-01 -0.102 0.0932 0.392 MAIT L2
ENSG00000120837 NFYB -998989 sc-eQTL 9.27e-01 0.00835 0.0908 0.392 MAIT L2
ENSG00000139372 TDG -826570 sc-eQTL 2.41e-01 -0.115 0.098 0.392 MAIT L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.70e-01 0.0279 0.0954 0.392 MAIT L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 6.90e-01 0.0342 0.0855 0.392 MAIT L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 9.36e-01 0.00772 0.0962 0.392 MAIT L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 3.72e-01 0.0707 0.0791 0.392 MAIT L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 3.18e-01 0.0924 0.0923 0.404 NK_CD56bright L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.14e-01 -0.0765 0.0936 0.404 NK_CD56bright L2
ENSG00000139372 TDG -826570 sc-eQTL 2.63e-01 -0.107 0.095 0.404 NK_CD56bright L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.99e-01 -0.0496 0.0941 0.404 NK_CD56bright L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.44e-01 -0.0765 0.0996 0.404 NK_CD56bright L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 5.17e-01 -0.0598 0.0922 0.401 NK_CD56dim L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.99e-01 0.0319 0.0824 0.401 NK_CD56dim L2
ENSG00000139372 TDG -826570 sc-eQTL 1.65e-01 -0.109 0.0778 0.401 NK_CD56dim L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 9.94e-01 -0.00062 0.0783 0.401 NK_CD56dim L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.42e-01 -0.0296 0.0898 0.401 NK_CD56dim L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.53e-01 0.0307 0.0975 0.402 NK_HLA L2
ENSG00000120837 NFYB -998989 sc-eQTL 4.93e-01 -0.0679 0.0989 0.402 NK_HLA L2
ENSG00000139372 TDG -826570 sc-eQTL 5.14e-01 -0.0639 0.0977 0.402 NK_HLA L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.42e-01 -0.0317 0.096 0.402 NK_HLA L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.80e-02 0.183 0.0879 0.402 NK_HLA L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 1.84e-02 -0.221 0.0932 0.401 NK_cytokine L2
ENSG00000120837 NFYB -998989 sc-eQTL 7.58e-01 -0.0253 0.0819 0.401 NK_cytokine L2
ENSG00000139372 TDG -826570 sc-eQTL 1.19e-01 -0.13 0.0832 0.401 NK_cytokine L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.14e-01 -0.042 0.0831 0.401 NK_cytokine L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.44e-01 0.0171 0.0869 0.401 NK_cytokine L2
ENSG00000017427 IGF1 657508 sc-eQTL 4.37e-01 -0.0579 0.0742 0.4 PB L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 4.58e-01 0.0867 0.117 0.4 PB L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 2.48e-01 -0.115 0.0993 0.4 PB L2
ENSG00000120837 NFYB -998989 sc-eQTL 9.41e-01 0.00867 0.116 0.4 PB L2
ENSG00000139372 TDG -826570 sc-eQTL 4.10e-01 0.0979 0.119 0.4 PB L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.63e-01 0.0497 0.0545 0.4 PB L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 9.03e-01 0.0116 0.0957 0.4 PB L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.66e-01 0.108 0.119 0.4 PB L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 3.01e-01 0.094 0.0905 0.4 PB L2
ENSG00000017427 IGF1 657508 sc-eQTL 7.56e-01 -0.00986 0.0317 0.398 Pro_T L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 1.75e-02 -0.188 0.0784 0.398 Pro_T L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.62e-01 0.0151 0.0863 0.398 Pro_T L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.60e-01 0.0393 0.0893 0.398 Pro_T L2
ENSG00000139372 TDG -826570 sc-eQTL 2.73e-01 0.0928 0.0844 0.398 Pro_T L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 2.90e-02 -0.129 0.0585 0.398 Pro_T L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 1.74e-01 0.11 0.0809 0.398 Pro_T L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.85e-01 0.0893 0.0834 0.398 Pro_T L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 4.23e-01 0.0512 0.0639 0.398 Pro_T L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 6.54e-01 -0.0386 0.086 0.397 Treg L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.08e-01 0.037 0.0986 0.397 Treg L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.87e-01 -0.0353 0.0875 0.397 Treg L2
ENSG00000139372 TDG -826570 sc-eQTL 9.60e-01 0.00481 0.0968 0.397 Treg L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.90e-01 -0.077 0.0893 0.397 Treg L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 3.42e-01 -0.0729 0.0766 0.397 Treg L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.54e-02 -0.171 0.0959 0.397 Treg L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 2.59e-01 0.115 0.101 0.407 cDC L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 3.57e-01 -0.0821 0.0888 0.407 cDC L2
ENSG00000120837 NFYB -998989 sc-eQTL 8.05e-01 0.0236 0.0953 0.407 cDC L2
ENSG00000139372 TDG -826570 sc-eQTL 7.56e-01 0.0305 0.0979 0.407 cDC L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.65e-01 -0.0499 0.0867 0.407 cDC L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 8.60e-01 -0.0115 0.0647 0.407 cDC L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.20e-01 -0.0324 0.0903 0.407 cDC L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 1.01e-01 -0.144 0.0876 0.397 cMono_IL1B L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.76e-01 0.014 0.0899 0.397 cMono_IL1B L2
ENSG00000120837 NFYB -998989 sc-eQTL 3.00e-01 -0.0948 0.0913 0.397 cMono_IL1B L2
ENSG00000139372 TDG -826570 sc-eQTL 6.82e-01 0.0288 0.0702 0.397 cMono_IL1B L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.43e-01 0.0223 0.068 0.397 cMono_IL1B L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.24e-01 -0.0288 0.0815 0.397 cMono_IL1B L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 8.09e-01 -0.0216 0.0894 0.397 cMono_S100A L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 3.94e-01 0.0796 0.0931 0.397 cMono_S100A L2
ENSG00000120837 NFYB -998989 sc-eQTL 6.90e-01 0.0346 0.0867 0.397 cMono_S100A L2
ENSG00000139372 TDG -826570 sc-eQTL 3.92e-01 0.0683 0.0796 0.397 cMono_S100A L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.22e-01 0.0346 0.0701 0.397 cMono_S100A L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 8.13e-02 -0.154 0.0878 0.397 cMono_S100A L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.04e-01 -0.039 0.102 0.394 gdT L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 6.03e-02 0.198 0.105 0.394 gdT L2
ENSG00000120837 NFYB -998989 sc-eQTL 8.75e-01 0.0159 0.101 0.394 gdT L2
ENSG00000139372 TDG -826570 sc-eQTL 8.31e-01 -0.0218 0.102 0.394 gdT L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 8.76e-01 -0.0169 0.108 0.394 gdT L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 8.64e-01 -0.0174 0.101 0.394 gdT L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.27e-01 0.101 0.103 0.394 gdT L2
ENSG00000281344 HELLPAR 941667 sc-eQTL 2.62e-01 -0.104 0.092 0.394 gdT L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.87e-01 -0.0231 0.0853 0.398 intMono L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 1.18e-02 -0.226 0.0889 0.398 intMono L2
ENSG00000120837 NFYB -998989 sc-eQTL 2.42e-02 0.212 0.0932 0.398 intMono L2
ENSG00000139372 TDG -826570 sc-eQTL 3.34e-01 -0.0853 0.088 0.398 intMono L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 7.99e-01 -0.02 0.0787 0.398 intMono L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 3.60e-03 -0.233 0.079 0.398 intMono L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 2.79e-01 0.0982 0.0904 0.4 ncMono L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 8.73e-01 -0.0145 0.0908 0.4 ncMono L2
ENSG00000120837 NFYB -998989 sc-eQTL 7.38e-01 0.0306 0.0916 0.4 ncMono L2
ENSG00000139372 TDG -826570 sc-eQTL 5.82e-01 -0.0489 0.0888 0.4 ncMono L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.34e-01 -0.0377 0.0789 0.4 ncMono L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 7.27e-01 0.0312 0.0892 0.4 ncMono L2
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.09e-01 0.0337 0.0899 0.412 pDC L2
ENSG00000111727 HCFC2 -925279 sc-eQTL 3.24e-01 0.1 0.102 0.412 pDC L2
ENSG00000120837 NFYB -998989 sc-eQTL 2.32e-01 0.127 0.106 0.412 pDC L2
ENSG00000139372 TDG -826570 sc-eQTL 2.46e-01 -0.105 0.0901 0.412 pDC L2
ENSG00000166598 HSP90B1 -790855 sc-eQTL 8.84e-01 -0.0103 0.0707 0.412 pDC L2
ENSG00000179088 C12orf42 -356758 sc-eQTL 6.49e-01 0.042 0.0921 0.412 pDC L2
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.95e-01 0.0922 0.0876 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 657508 sc-eQTL 8.11e-01 0.0108 0.0452 0.397 B_Memory LOneK1K
ENSG00000111696 NT5DC3 -701982 sc-eQTL 7.92e-01 -0.0233 0.0884 0.397 B_Memory LOneK1K
ENSG00000111727 HCFC2 -925279 sc-eQTL 6.88e-01 0.0382 0.095 0.397 B_Memory LOneK1K
ENSG00000120837 NFYB -998989 sc-eQTL 5.14e-01 0.0569 0.087 0.397 B_Memory LOneK1K
ENSG00000139372 TDG -826570 sc-eQTL 1.64e-01 -0.128 0.0917 0.397 B_Memory LOneK1K
ENSG00000166598 HSP90B1 -790855 sc-eQTL 3.48e-01 -0.0773 0.0822 0.397 B_Memory LOneK1K
ENSG00000179088 C12orf42 -356758 sc-eQTL 2.85e-01 0.0755 0.0704 0.397 B_Memory LOneK1K
ENSG00000204954 C12orf73 -826456 sc-eQTL 4.27e-01 -0.0761 0.0956 0.397 B_Memory LOneK1K
ENSG00000281344 HELLPAR 941667 sc-eQTL 6.04e-02 -0.175 0.0927 0.397 B_Memory LOneK1K
ENSG00000017427 IGF1 657508 sc-eQTL 3.81e-01 0.0466 0.0531 0.397 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -701982 sc-eQTL 1.74e-01 0.122 0.0893 0.397 B_Naive LOneK1K
ENSG00000111727 HCFC2 -925279 sc-eQTL 7.28e-01 0.0337 0.0968 0.397 B_Naive LOneK1K
ENSG00000120837 NFYB -998989 sc-eQTL 7.89e-01 -0.0237 0.0883 0.397 B_Naive LOneK1K
ENSG00000139372 TDG -826570 sc-eQTL 7.92e-01 0.0218 0.0824 0.397 B_Naive LOneK1K
ENSG00000166598 HSP90B1 -790855 sc-eQTL 4.06e-02 -0.154 0.0746 0.397 B_Naive LOneK1K
ENSG00000179088 C12orf42 -356758 sc-eQTL 2.93e-01 0.0973 0.0923 0.397 B_Naive LOneK1K
ENSG00000204954 C12orf73 -826456 sc-eQTL 2.85e-01 0.103 0.0957 0.397 B_Naive LOneK1K
ENSG00000281344 HELLPAR 941667 sc-eQTL 7.87e-01 0.0244 0.0902 0.397 B_Naive LOneK1K
ENSG00000111696 NT5DC3 -701982 sc-eQTL 2.38e-01 -0.107 0.0903 0.397 CD14_Mono LOneK1K
ENSG00000111727 HCFC2 -925279 sc-eQTL 4.61e-01 0.0683 0.0926 0.397 CD14_Mono LOneK1K
ENSG00000120837 NFYB -998989 sc-eQTL 3.75e-01 -0.0762 0.0858 0.397 CD14_Mono LOneK1K
ENSG00000139372 TDG -826570 sc-eQTL 4.47e-01 0.0488 0.0642 0.397 CD14_Mono LOneK1K
ENSG00000166598 HSP90B1 -790855 sc-eQTL 5.24e-01 0.0402 0.063 0.397 CD14_Mono LOneK1K
ENSG00000204954 C12orf73 -826456 sc-eQTL 1.95e-01 -0.104 0.0799 0.397 CD14_Mono LOneK1K
ENSG00000111696 NT5DC3 -701982 sc-eQTL 4.17e-01 0.0731 0.0899 0.399 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -925279 sc-eQTL 1.98e-01 -0.113 0.0877 0.399 CD16_Mono LOneK1K
ENSG00000120837 NFYB -998989 sc-eQTL 1.08e-01 0.139 0.086 0.399 CD16_Mono LOneK1K
ENSG00000139372 TDG -826570 sc-eQTL 3.49e-01 -0.0784 0.0835 0.399 CD16_Mono LOneK1K
ENSG00000166598 HSP90B1 -790855 sc-eQTL 6.87e-01 -0.0337 0.0835 0.399 CD16_Mono LOneK1K
ENSG00000204954 C12orf73 -826456 sc-eQTL 6.26e-02 -0.16 0.0854 0.399 CD16_Mono LOneK1K
ENSG00000111727 HCFC2 -925279 sc-eQTL 9.33e-02 -0.145 0.0859 0.401 NK_CD56dim LOneK1K
ENSG00000120837 NFYB -998989 sc-eQTL 9.95e-01 0.000439 0.0762 0.401 NK_CD56dim LOneK1K
ENSG00000139372 TDG -826570 sc-eQTL 6.32e-02 -0.139 0.0746 0.401 NK_CD56dim LOneK1K
ENSG00000166598 HSP90B1 -790855 sc-eQTL 8.58e-01 -0.0141 0.0791 0.401 NK_CD56dim LOneK1K
ENSG00000204954 C12orf73 -826456 sc-eQTL 9.27e-01 0.00757 0.0831 0.401 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000120837 NFYB -998989 eQTL 0.0503 -0.035 0.0179 0.00101 0.0 0.375

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120837 NFYB -998989 2.67e-07 1.3e-07 4.69e-08 1.84e-07 9.24e-08 9.8e-08 1.53e-07 5.37e-08 1.45e-07 4.94e-08 1.54e-07 9e-08 1.45e-07 6.76e-08 6.04e-08 7.53e-08 3.87e-08 1.27e-07 5.75e-08 4.16e-08 1.13e-07 1.27e-07 1.39e-07 2.95e-08 1.46e-07 1.14e-07 1.07e-07 9.65e-08 1.12e-07 1.03e-07 9.7e-08 3.64e-08 3.61e-08 8.34e-08 7.51e-08 3.95e-08 5.02e-08 9.25e-08 6.56e-08 4.02e-08 5.14e-08 1.35e-07 5.22e-08 1.45e-08 4.25e-08 1.83e-08 1.21e-07 3.81e-09 4.94e-08