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Genes within 1Mb (chr12:102651561:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 169817 sc-eQTL 1.85e-02 -0.0886 0.0373 0.4 B L1
ENSG00000075188 NUP37 531441 sc-eQTL 1.59e-01 -0.0926 0.0655 0.4 B L1
ENSG00000111666 CHPT1 954614 sc-eQTL 9.62e-01 0.00192 0.04 0.4 B L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.72e-01 0.0416 0.0578 0.4 B L1
ENSG00000120860 WASHC3 589412 sc-eQTL 7.56e-01 -0.0141 0.0452 0.4 B L1
ENSG00000136048 DRAM1 773981 sc-eQTL 7.39e-01 -0.0171 0.0513 0.4 B L1
ENSG00000139351 SYCP3 912089 sc-eQTL 4.62e-01 0.06 0.0815 0.4 B L1
ENSG00000179088 C12orf42 -844449 sc-eQTL 7.04e-01 0.0265 0.0697 0.4 B L1
ENSG00000185480 PARPBP 531376 sc-eQTL 2.50e-02 0.174 0.0772 0.4 B L1
ENSG00000281344 HELLPAR 453976 sc-eQTL 7.91e-01 -0.0193 0.0728 0.4 B L1
ENSG00000075188 NUP37 531441 sc-eQTL 3.52e-01 -0.0559 0.0599 0.4 CD4T L1
ENSG00000111666 CHPT1 954614 sc-eQTL 6.30e-01 0.0391 0.081 0.4 CD4T L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 9.52e-01 0.00338 0.0562 0.4 CD4T L1
ENSG00000120860 WASHC3 589412 sc-eQTL 9.01e-01 -0.00529 0.0426 0.4 CD4T L1
ENSG00000179088 C12orf42 -844449 sc-eQTL 4.81e-02 -0.155 0.0777 0.4 CD4T L1
ENSG00000075188 NUP37 531441 sc-eQTL 8.15e-01 0.0178 0.076 0.4 CD8T L1
ENSG00000111666 CHPT1 954614 sc-eQTL 8.59e-01 0.0147 0.0823 0.4 CD8T L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 7.98e-01 -0.0138 0.054 0.4 CD8T L1
ENSG00000120860 WASHC3 589412 sc-eQTL 4.86e-01 0.0372 0.0534 0.4 CD8T L1
ENSG00000136048 DRAM1 773981 sc-eQTL 9.43e-01 0.00545 0.0766 0.4 CD8T L1
ENSG00000179088 C12orf42 -844449 sc-eQTL 7.89e-01 -0.0233 0.0869 0.4 CD8T L1
ENSG00000075188 NUP37 531441 sc-eQTL 9.69e-01 -0.00335 0.0849 0.403 DC L1
ENSG00000111666 CHPT1 954614 sc-eQTL 5.90e-01 -0.0418 0.0775 0.403 DC L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.75e-01 0.0611 0.0852 0.403 DC L1
ENSG00000120860 WASHC3 589412 sc-eQTL 3.21e-01 -0.0808 0.0813 0.403 DC L1
ENSG00000136048 DRAM1 773981 sc-eQTL 5.06e-01 0.0448 0.0672 0.403 DC L1
ENSG00000179088 C12orf42 -844449 sc-eQTL 9.82e-02 -0.125 0.0755 0.403 DC L1
ENSG00000185480 PARPBP 531376 sc-eQTL 9.69e-01 -0.0035 0.0887 0.403 DC L1
ENSG00000075188 NUP37 531441 sc-eQTL 9.99e-01 -8.15e-05 0.0705 0.4 Mono L1
ENSG00000111666 CHPT1 954614 sc-eQTL 8.34e-01 -0.0126 0.0597 0.4 Mono L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 9.95e-01 -0.000507 0.0749 0.4 Mono L1
ENSG00000120860 WASHC3 589412 sc-eQTL 8.73e-01 -0.0109 0.0676 0.4 Mono L1
ENSG00000136048 DRAM1 773981 sc-eQTL 2.43e-01 -0.0643 0.0549 0.4 Mono L1
ENSG00000075188 NUP37 531441 sc-eQTL 9.46e-01 -0.00521 0.0767 0.401 NK L1
ENSG00000111666 CHPT1 954614 sc-eQTL 6.62e-01 -0.0311 0.0712 0.401 NK L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.60e-01 -0.0381 0.0516 0.401 NK L1
ENSG00000120860 WASHC3 589412 sc-eQTL 2.51e-01 0.066 0.0574 0.401 NK L1
ENSG00000136048 DRAM1 773981 sc-eQTL 3.71e-01 0.0732 0.0817 0.401 NK L1
ENSG00000185480 PARPBP 531376 sc-eQTL 6.12e-01 -0.0488 0.096 0.401 NK L1
ENSG00000017427 IGF1 169817 sc-eQTL 6.86e-01 -0.0118 0.0291 0.4 Other_T L1
ENSG00000075188 NUP37 531441 sc-eQTL 3.84e-01 -0.0483 0.0555 0.4 Other_T L1
ENSG00000111666 CHPT1 954614 sc-eQTL 8.24e-01 -0.0181 0.0811 0.4 Other_T L1
ENSG00000111670 GNPTAB 820602 sc-eQTL 1.78e-01 -0.0787 0.0583 0.4 Other_T L1
ENSG00000120860 WASHC3 589412 sc-eQTL 9.61e-01 0.00287 0.0592 0.4 Other_T L1
ENSG00000136048 DRAM1 773981 sc-eQTL 3.80e-01 0.0624 0.0709 0.4 Other_T L1
ENSG00000179088 C12orf42 -844449 sc-eQTL 5.94e-01 0.045 0.0842 0.4 Other_T L1
ENSG00000185480 PARPBP 531376 sc-eQTL 4.85e-01 0.0414 0.0591 0.4 Other_T L1
ENSG00000281344 HELLPAR 453976 sc-eQTL 4.87e-01 0.0479 0.0688 0.4 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 169817 sc-eQTL 4.78e-02 -0.0386 0.0194 0.372 B_Activated L2
ENSG00000075188 NUP37 531441 sc-eQTL 6.55e-01 -0.0454 0.101 0.372 B_Activated L2
ENSG00000111666 CHPT1 954614 sc-eQTL 1.13e-01 -0.119 0.0745 0.372 B_Activated L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.05e-01 0.109 0.106 0.372 B_Activated L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.14e-01 0.0239 0.101 0.372 B_Activated L2
ENSG00000136048 DRAM1 773981 sc-eQTL 5.86e-01 -0.0555 0.102 0.372 B_Activated L2
ENSG00000139351 SYCP3 912089 sc-eQTL 6.82e-01 0.0343 0.0836 0.372 B_Activated L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 5.48e-01 0.0534 0.0888 0.372 B_Activated L2
ENSG00000185480 PARPBP 531376 sc-eQTL 5.69e-01 0.0481 0.0842 0.372 B_Activated L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 3.66e-01 -0.0716 0.079 0.372 B_Activated L2
ENSG00000017427 IGF1 169817 sc-eQTL 7.80e-01 0.0108 0.0385 0.399 B_Intermediate L2
ENSG00000075188 NUP37 531441 sc-eQTL 8.72e-01 0.0154 0.0959 0.399 B_Intermediate L2
ENSG00000111666 CHPT1 954614 sc-eQTL 1.53e-02 -0.124 0.0507 0.399 B_Intermediate L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 2.60e-01 0.0857 0.0758 0.399 B_Intermediate L2
ENSG00000120860 WASHC3 589412 sc-eQTL 2.42e-01 -0.092 0.0784 0.399 B_Intermediate L2
ENSG00000136048 DRAM1 773981 sc-eQTL 7.33e-01 -0.0288 0.0843 0.399 B_Intermediate L2
ENSG00000139351 SYCP3 912089 sc-eQTL 4.08e-01 0.0734 0.0885 0.399 B_Intermediate L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 1.42e-01 -0.124 0.0842 0.399 B_Intermediate L2
ENSG00000185480 PARPBP 531376 sc-eQTL 2.53e-01 0.106 0.0928 0.399 B_Intermediate L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 5.92e-03 0.244 0.0876 0.399 B_Intermediate L2
ENSG00000017427 IGF1 169817 sc-eQTL 9.89e-01 0.000495 0.0347 0.401 B_Memory L2
ENSG00000075188 NUP37 531441 sc-eQTL 3.25e-01 -0.0902 0.0914 0.401 B_Memory L2
ENSG00000111666 CHPT1 954614 sc-eQTL 5.72e-01 0.0338 0.0598 0.401 B_Memory L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.33e-01 0.0792 0.0817 0.401 B_Memory L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.73e-01 -0.0128 0.08 0.401 B_Memory L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.72e-01 -0.0136 0.0839 0.401 B_Memory L2
ENSG00000139351 SYCP3 912089 sc-eQTL 3.20e-01 0.0859 0.0861 0.401 B_Memory L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.93e-01 0.0912 0.0866 0.401 B_Memory L2
ENSG00000185480 PARPBP 531376 sc-eQTL 1.41e-01 0.13 0.0879 0.401 B_Memory L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 8.13e-01 0.019 0.0804 0.401 B_Memory L2
ENSG00000017427 IGF1 169817 sc-eQTL 4.27e-01 0.0377 0.0474 0.4 B_Naive1 L2
ENSG00000075188 NUP37 531441 sc-eQTL 5.70e-01 0.0488 0.0859 0.4 B_Naive1 L2
ENSG00000111666 CHPT1 954614 sc-eQTL 9.73e-01 0.00153 0.0447 0.4 B_Naive1 L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 9.31e-02 0.106 0.0628 0.4 B_Naive1 L2
ENSG00000120860 WASHC3 589412 sc-eQTL 7.75e-01 0.0182 0.0634 0.4 B_Naive1 L2
ENSG00000136048 DRAM1 773981 sc-eQTL 5.63e-01 0.0398 0.0686 0.4 B_Naive1 L2
ENSG00000139351 SYCP3 912089 sc-eQTL 9.36e-01 -0.00744 0.0933 0.4 B_Naive1 L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 7.52e-01 0.0285 0.0901 0.4 B_Naive1 L2
ENSG00000185480 PARPBP 531376 sc-eQTL 1.16e-01 0.142 0.0903 0.4 B_Naive1 L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 4.23e-01 -0.0682 0.0849 0.4 B_Naive1 L2
ENSG00000017427 IGF1 169817 sc-eQTL 3.79e-01 -0.0369 0.0419 0.399 B_Naive2 L2
ENSG00000075188 NUP37 531441 sc-eQTL 2.52e-01 -0.0985 0.0857 0.399 B_Naive2 L2
ENSG00000111666 CHPT1 954614 sc-eQTL 1.07e-01 0.0741 0.0458 0.399 B_Naive2 L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.69e-01 -0.0641 0.0712 0.399 B_Naive2 L2
ENSG00000120860 WASHC3 589412 sc-eQTL 6.52e-01 0.0357 0.079 0.399 B_Naive2 L2
ENSG00000136048 DRAM1 773981 sc-eQTL 3.88e-01 0.0676 0.0782 0.399 B_Naive2 L2
ENSG00000139351 SYCP3 912089 sc-eQTL 1.78e-01 0.111 0.0821 0.399 B_Naive2 L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.00e-01 0.114 0.0886 0.399 B_Naive2 L2
ENSG00000185480 PARPBP 531376 sc-eQTL 1.67e-01 0.131 0.0946 0.399 B_Naive2 L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 9.06e-01 0.00971 0.082 0.399 B_Naive2 L2
ENSG00000075188 NUP37 531441 sc-eQTL 1.50e-01 0.136 0.0942 0.4 CD4_CTL L2
ENSG00000111666 CHPT1 954614 sc-eQTL 2.59e-01 -0.107 0.0946 0.4 CD4_CTL L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 1.23e-01 -0.128 0.0825 0.4 CD4_CTL L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.11e-01 -0.0222 0.0928 0.4 CD4_CTL L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.66e-01 0.0958 0.0859 0.4 CD4_CTL L2
ENSG00000075188 NUP37 531441 sc-eQTL 5.14e-01 -0.0453 0.0693 0.4 CD4_Naive L2
ENSG00000111666 CHPT1 954614 sc-eQTL 4.91e-01 0.0552 0.08 0.4 CD4_Naive L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 6.87e-01 0.0249 0.0617 0.4 CD4_Naive L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.42e-01 -0.0102 0.0509 0.4 CD4_Naive L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 1.16e-01 -0.129 0.0816 0.4 CD4_Naive L2
ENSG00000075188 NUP37 531441 sc-eQTL 5.81e-01 0.0401 0.0725 0.4 CD4_TCM L2
ENSG00000111666 CHPT1 954614 sc-eQTL 8.99e-01 0.0106 0.0837 0.4 CD4_TCM L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 8.76e-02 -0.11 0.0643 0.4 CD4_TCM L2
ENSG00000120860 WASHC3 589412 sc-eQTL 7.39e-01 -0.0166 0.0498 0.4 CD4_TCM L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.03e-01 -0.107 0.084 0.4 CD4_TCM L2
ENSG00000075188 NUP37 531441 sc-eQTL 5.86e-01 0.0471 0.0864 0.4 CD4_TEM L2
ENSG00000111666 CHPT1 954614 sc-eQTL 7.14e-01 -0.0305 0.0832 0.4 CD4_TEM L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.15e-01 -0.0804 0.0799 0.4 CD4_TEM L2
ENSG00000120860 WASHC3 589412 sc-eQTL 6.96e-02 -0.133 0.0728 0.4 CD4_TEM L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 5.45e-01 -0.0548 0.0904 0.4 CD4_TEM L2
ENSG00000075188 NUP37 531441 sc-eQTL 9.66e-01 -0.00347 0.0802 0.4 CD8_CTL L2
ENSG00000111666 CHPT1 954614 sc-eQTL 6.26e-01 0.0402 0.0822 0.4 CD8_CTL L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 8.52e-01 -0.0123 0.0658 0.4 CD8_CTL L2
ENSG00000120860 WASHC3 589412 sc-eQTL 5.02e-01 0.0505 0.075 0.4 CD8_CTL L2
ENSG00000136048 DRAM1 773981 sc-eQTL 4.17e-01 0.0759 0.0933 0.4 CD8_CTL L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.50e-01 0.104 0.0899 0.4 CD8_CTL L2
ENSG00000075188 NUP37 531441 sc-eQTL 1.43e-01 -0.126 0.0859 0.4 CD8_Naive L2
ENSG00000111666 CHPT1 954614 sc-eQTL 9.51e-01 0.00532 0.0858 0.4 CD8_Naive L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.00e-01 0.0649 0.0769 0.4 CD8_Naive L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.12e-01 -0.014 0.0586 0.4 CD8_Naive L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.44e-01 -0.0178 0.0904 0.4 CD8_Naive L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 4.58e-01 0.0662 0.0891 0.4 CD8_Naive L2
ENSG00000075188 NUP37 531441 sc-eQTL 4.12e-01 0.0766 0.0931 0.398 CD8_TCM L2
ENSG00000111666 CHPT1 954614 sc-eQTL 9.01e-01 0.0104 0.0836 0.398 CD8_TCM L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 6.22e-01 -0.0427 0.0865 0.398 CD8_TCM L2
ENSG00000120860 WASHC3 589412 sc-eQTL 2.42e-01 0.0971 0.0828 0.398 CD8_TCM L2
ENSG00000136048 DRAM1 773981 sc-eQTL 2.40e-01 0.106 0.0902 0.398 CD8_TCM L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 8.56e-01 0.0162 0.0891 0.398 CD8_TCM L2
ENSG00000075188 NUP37 531441 sc-eQTL 4.07e-01 0.0769 0.0927 0.395 CD8_TEM L2
ENSG00000111666 CHPT1 954614 sc-eQTL 4.33e-01 -0.0689 0.0877 0.395 CD8_TEM L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 9.34e-01 -0.00784 0.094 0.395 CD8_TEM L2
ENSG00000120860 WASHC3 589412 sc-eQTL 4.98e-01 0.0571 0.0842 0.395 CD8_TEM L2
ENSG00000136048 DRAM1 773981 sc-eQTL 5.20e-01 -0.0599 0.0929 0.395 CD8_TEM L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 7.90e-01 -0.0247 0.0926 0.395 CD8_TEM L2
ENSG00000017427 IGF1 169817 sc-eQTL 7.18e-01 0.0115 0.0318 0.396 MAIT L2
ENSG00000075188 NUP37 531441 sc-eQTL 1.50e-01 -0.128 0.0889 0.396 MAIT L2
ENSG00000111666 CHPT1 954614 sc-eQTL 2.72e-01 -0.0957 0.0868 0.396 MAIT L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.62e-01 -0.0704 0.077 0.396 MAIT L2
ENSG00000120860 WASHC3 589412 sc-eQTL 9.95e-01 -0.000494 0.0785 0.396 MAIT L2
ENSG00000136048 DRAM1 773981 sc-eQTL 9.32e-02 -0.149 0.0884 0.396 MAIT L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 1.04e-01 -0.135 0.0829 0.396 MAIT L2
ENSG00000185480 PARPBP 531376 sc-eQTL 6.88e-01 -0.0351 0.0872 0.396 MAIT L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 7.75e-01 0.022 0.0772 0.396 MAIT L2
ENSG00000075188 NUP37 531441 sc-eQTL 7.83e-01 0.0274 0.0993 0.413 NK_CD56bright L2
ENSG00000111666 CHPT1 954614 sc-eQTL 7.48e-01 -0.0231 0.0719 0.413 NK_CD56bright L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 5.70e-01 0.0472 0.083 0.413 NK_CD56bright L2
ENSG00000120860 WASHC3 589412 sc-eQTL 7.68e-01 0.0252 0.0856 0.413 NK_CD56bright L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.62e-02 0.154 0.0895 0.413 NK_CD56bright L2
ENSG00000185480 PARPBP 531376 sc-eQTL 4.62e-01 -0.07 0.095 0.413 NK_CD56bright L2
ENSG00000075188 NUP37 531441 sc-eQTL 6.79e-01 -0.035 0.0844 0.403 NK_CD56dim L2
ENSG00000111666 CHPT1 954614 sc-eQTL 6.16e-01 -0.0414 0.0824 0.403 NK_CD56dim L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 5.34e-01 -0.0388 0.0623 0.403 NK_CD56dim L2
ENSG00000120860 WASHC3 589412 sc-eQTL 9.45e-01 0.00495 0.0718 0.403 NK_CD56dim L2
ENSG00000136048 DRAM1 773981 sc-eQTL 2.59e-01 0.0983 0.0868 0.403 NK_CD56dim L2
ENSG00000185480 PARPBP 531376 sc-eQTL 7.55e-01 0.0306 0.0981 0.403 NK_CD56dim L2
ENSG00000075188 NUP37 531441 sc-eQTL 7.76e-01 0.0253 0.0887 0.416 NK_HLA L2
ENSG00000111666 CHPT1 954614 sc-eQTL 7.61e-01 0.0277 0.091 0.416 NK_HLA L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 2.04e-01 -0.0929 0.0729 0.416 NK_HLA L2
ENSG00000120860 WASHC3 589412 sc-eQTL 1.88e-02 0.212 0.0895 0.416 NK_HLA L2
ENSG00000136048 DRAM1 773981 sc-eQTL 9.97e-01 0.000293 0.0933 0.416 NK_HLA L2
ENSG00000185480 PARPBP 531376 sc-eQTL 4.23e-01 -0.0736 0.0916 0.416 NK_HLA L2
ENSG00000075188 NUP37 531441 sc-eQTL 5.02e-01 0.0571 0.0848 0.403 NK_cytokine L2
ENSG00000111666 CHPT1 954614 sc-eQTL 8.87e-01 -0.0113 0.0794 0.403 NK_cytokine L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.89e-02 -0.124 0.0597 0.403 NK_cytokine L2
ENSG00000120860 WASHC3 589412 sc-eQTL 7.21e-01 0.0239 0.0666 0.403 NK_cytokine L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.45e-01 0.017 0.0868 0.403 NK_cytokine L2
ENSG00000185480 PARPBP 531376 sc-eQTL 8.25e-01 0.0207 0.0937 0.403 NK_cytokine L2
ENSG00000017427 IGF1 169817 sc-eQTL 3.74e-01 0.062 0.0695 0.389 PB L2
ENSG00000075188 NUP37 531441 sc-eQTL 1.46e-01 -0.136 0.093 0.389 PB L2
ENSG00000111666 CHPT1 954614 sc-eQTL 1.31e-02 0.179 0.0708 0.389 PB L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 8.22e-01 -0.0236 0.105 0.389 PB L2
ENSG00000120860 WASHC3 589412 sc-eQTL 9.43e-01 -0.00616 0.0853 0.389 PB L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.19e-01 0.0198 0.0865 0.389 PB L2
ENSG00000139351 SYCP3 912089 sc-eQTL 5.69e-01 0.0574 0.1 0.389 PB L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.05e-01 -0.114 0.0891 0.389 PB L2
ENSG00000185480 PARPBP 531376 sc-eQTL 6.75e-01 -0.0386 0.092 0.389 PB L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 5.43e-01 0.0519 0.0851 0.389 PB L2
ENSG00000017427 IGF1 169817 sc-eQTL 2.78e-02 -0.0693 0.0313 0.4 Pro_T L2
ENSG00000075188 NUP37 531441 sc-eQTL 3.06e-01 -0.0654 0.0637 0.4 Pro_T L2
ENSG00000111666 CHPT1 954614 sc-eQTL 8.00e-01 0.0214 0.0846 0.4 Pro_T L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 1.06e-01 -0.101 0.0622 0.4 Pro_T L2
ENSG00000120860 WASHC3 589412 sc-eQTL 1.21e-01 -0.114 0.073 0.4 Pro_T L2
ENSG00000136048 DRAM1 773981 sc-eQTL 2.19e-02 0.144 0.0622 0.4 Pro_T L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 9.68e-01 0.00321 0.0811 0.4 Pro_T L2
ENSG00000185480 PARPBP 531376 sc-eQTL 3.80e-01 0.0513 0.0583 0.4 Pro_T L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 9.72e-01 -0.00226 0.0638 0.4 Pro_T L2
ENSG00000075188 NUP37 531441 sc-eQTL 8.14e-01 0.021 0.0892 0.4 Treg L2
ENSG00000111666 CHPT1 954614 sc-eQTL 7.68e-01 0.0274 0.0928 0.4 Treg L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.37e-01 0.0778 0.0809 0.4 Treg L2
ENSG00000120860 WASHC3 589412 sc-eQTL 1.11e-01 0.118 0.0738 0.4 Treg L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 9.25e-01 -0.00714 0.0754 0.4 Treg L2
ENSG00000075188 NUP37 531441 sc-eQTL 2.86e-01 -0.09 0.0841 0.41 cDC L2
ENSG00000111666 CHPT1 954614 sc-eQTL 8.62e-01 0.0143 0.0823 0.41 cDC L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 7.82e-01 0.0294 0.106 0.41 cDC L2
ENSG00000120860 WASHC3 589412 sc-eQTL 3.94e-01 -0.0799 0.0935 0.41 cDC L2
ENSG00000136048 DRAM1 773981 sc-eQTL 9.44e-01 -0.00513 0.073 0.41 cDC L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 3.50e-01 -0.0611 0.0652 0.41 cDC L2
ENSG00000185480 PARPBP 531376 sc-eQTL 8.53e-01 0.0154 0.0833 0.41 cDC L2
ENSG00000075188 NUP37 531441 sc-eQTL 8.72e-01 -0.0131 0.0812 0.4 cMono_IL1B L2
ENSG00000111666 CHPT1 954614 sc-eQTL 7.20e-01 0.022 0.0613 0.4 cMono_IL1B L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.35e-01 0.0784 0.0811 0.4 cMono_IL1B L2
ENSG00000120860 WASHC3 589412 sc-eQTL 5.60e-01 -0.0412 0.0706 0.4 cMono_IL1B L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.96e-01 0.00791 0.0602 0.4 cMono_IL1B L2
ENSG00000075188 NUP37 531441 sc-eQTL 3.65e-01 -0.0807 0.0889 0.4 cMono_S100A L2
ENSG00000111666 CHPT1 954614 sc-eQTL 8.39e-01 -0.0139 0.0683 0.4 cMono_S100A L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 6.58e-02 -0.152 0.0824 0.4 cMono_S100A L2
ENSG00000120860 WASHC3 589412 sc-eQTL 5.45e-01 0.0512 0.0844 0.4 cMono_S100A L2
ENSG00000136048 DRAM1 773981 sc-eQTL 2.26e-01 -0.0796 0.0656 0.4 cMono_S100A L2
ENSG00000075188 NUP37 531441 sc-eQTL 4.70e-01 0.0835 0.115 0.427 gdT L2
ENSG00000111666 CHPT1 954614 sc-eQTL 6.99e-01 -0.0419 0.108 0.427 gdT L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 5.28e-02 -0.157 0.0805 0.427 gdT L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.97e-01 0.0137 0.105 0.427 gdT L2
ENSG00000136048 DRAM1 773981 sc-eQTL 7.83e-01 0.0295 0.107 0.427 gdT L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 1.55e-01 0.15 0.105 0.427 gdT L2
ENSG00000185480 PARPBP 531376 sc-eQTL 3.16e-01 0.105 0.105 0.427 gdT L2
ENSG00000281344 HELLPAR 453976 sc-eQTL 3.78e-01 0.0848 0.096 0.427 gdT L2
ENSG00000075188 NUP37 531441 sc-eQTL 8.16e-01 0.0209 0.0895 0.407 intMono L2
ENSG00000111666 CHPT1 954614 sc-eQTL 3.46e-01 -0.0772 0.0817 0.407 intMono L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.74e-01 0.0689 0.096 0.407 intMono L2
ENSG00000120860 WASHC3 589412 sc-eQTL 8.89e-01 0.0126 0.09 0.407 intMono L2
ENSG00000136048 DRAM1 773981 sc-eQTL 2.55e-01 -0.0896 0.0784 0.407 intMono L2
ENSG00000075188 NUP37 531441 sc-eQTL 7.26e-01 0.0308 0.0879 0.412 ncMono L2
ENSG00000111666 CHPT1 954614 sc-eQTL 5.26e-01 -0.0515 0.0811 0.412 ncMono L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.14e-01 -0.0978 0.097 0.412 ncMono L2
ENSG00000120860 WASHC3 589412 sc-eQTL 3.58e-01 -0.0722 0.0784 0.412 ncMono L2
ENSG00000136048 DRAM1 773981 sc-eQTL 5.91e-01 0.0393 0.0731 0.412 ncMono L2
ENSG00000075188 NUP37 531441 sc-eQTL 3.35e-02 0.22 0.102 0.415 pDC L2
ENSG00000111666 CHPT1 954614 sc-eQTL 6.29e-01 -0.0437 0.0904 0.415 pDC L2
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.34e-01 0.0925 0.0955 0.415 pDC L2
ENSG00000120860 WASHC3 589412 sc-eQTL 3.03e-01 -0.0902 0.0872 0.415 pDC L2
ENSG00000136048 DRAM1 773981 sc-eQTL 8.59e-01 -0.012 0.0676 0.415 pDC L2
ENSG00000179088 C12orf42 -844449 sc-eQTL 3.22e-02 -0.192 0.0887 0.415 pDC L2
ENSG00000185480 PARPBP 531376 sc-eQTL 4.92e-01 -0.0618 0.0897 0.415 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 169817 sc-eQTL 8.43e-01 0.00872 0.044 0.4 B_Memory LOneK1K
ENSG00000075188 NUP37 531441 sc-eQTL 5.65e-01 -0.051 0.0883 0.4 B_Memory LOneK1K
ENSG00000111666 CHPT1 954614 sc-eQTL 2.24e-01 -0.0565 0.0463 0.4 B_Memory LOneK1K
ENSG00000111670 GNPTAB 820602 sc-eQTL 4.46e-02 0.146 0.0724 0.4 B_Memory LOneK1K
ENSG00000120860 WASHC3 589412 sc-eQTL 3.77e-01 -0.0562 0.0634 0.4 B_Memory LOneK1K
ENSG00000136048 DRAM1 773981 sc-eQTL 3.50e-01 -0.0712 0.076 0.4 B_Memory LOneK1K
ENSG00000139351 SYCP3 912089 sc-eQTL 9.45e-01 0.00609 0.0877 0.4 B_Memory LOneK1K
ENSG00000179088 C12orf42 -844449 sc-eQTL 2.40e-01 -0.0807 0.0685 0.4 B_Memory LOneK1K
ENSG00000185480 PARPBP 531376 sc-eQTL 8.29e-02 0.159 0.0912 0.4 B_Memory LOneK1K
ENSG00000281344 HELLPAR 453976 sc-eQTL 1.30e-01 0.138 0.0905 0.4 B_Memory LOneK1K
ENSG00000017427 IGF1 169817 sc-eQTL 9.63e-01 -0.00234 0.0503 0.4 B_Naive LOneK1K
ENSG00000075188 NUP37 531441 sc-eQTL 7.89e-01 -0.022 0.0823 0.4 B_Naive LOneK1K
ENSG00000111666 CHPT1 954614 sc-eQTL 4.34e-01 0.0318 0.0406 0.4 B_Naive LOneK1K
ENSG00000111670 GNPTAB 820602 sc-eQTL 5.69e-01 0.0332 0.0581 0.4 B_Naive LOneK1K
ENSG00000120860 WASHC3 589412 sc-eQTL 8.92e-01 -0.0083 0.0609 0.4 B_Naive LOneK1K
ENSG00000136048 DRAM1 773981 sc-eQTL 6.34e-01 0.0304 0.0638 0.4 B_Naive LOneK1K
ENSG00000139351 SYCP3 912089 sc-eQTL 3.94e-01 0.0785 0.0919 0.4 B_Naive LOneK1K
ENSG00000179088 C12orf42 -844449 sc-eQTL 5.92e-01 0.0469 0.0874 0.4 B_Naive LOneK1K
ENSG00000185480 PARPBP 531376 sc-eQTL 3.70e-02 0.195 0.0928 0.4 B_Naive LOneK1K
ENSG00000281344 HELLPAR 453976 sc-eQTL 2.98e-01 -0.0889 0.0851 0.4 B_Naive LOneK1K
ENSG00000075188 NUP37 531441 sc-eQTL 4.77e-01 -0.0533 0.0749 0.4 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 954614 sc-eQTL 8.82e-01 0.00897 0.0606 0.4 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 820602 sc-eQTL 9.90e-01 0.00102 0.078 0.4 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 589412 sc-eQTL 7.25e-01 0.0241 0.0686 0.4 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 773981 sc-eQTL 3.22e-01 -0.0558 0.0562 0.4 CD14_Mono LOneK1K
ENSG00000075188 NUP37 531441 sc-eQTL 7.48e-01 0.0276 0.0857 0.403 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 954614 sc-eQTL 3.81e-01 -0.0656 0.0747 0.403 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 820602 sc-eQTL 7.62e-01 0.0275 0.0906 0.403 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 589412 sc-eQTL 2.98e-01 -0.0783 0.075 0.403 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 773981 sc-eQTL 8.48e-01 0.0124 0.0648 0.403 CD16_Mono LOneK1K
ENSG00000075188 NUP37 531441 sc-eQTL 9.34e-01 -0.00676 0.0812 0.403 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 954614 sc-eQTL 9.09e-01 -0.0091 0.0793 0.403 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 820602 sc-eQTL 3.50e-01 -0.0507 0.0542 0.403 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 589412 sc-eQTL 3.11e-01 0.0634 0.0624 0.403 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 773981 sc-eQTL 6.42e-01 0.0391 0.084 0.403 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 531376 sc-eQTL 7.18e-01 -0.0357 0.0989 0.403 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111670 GNPTAB 820602 eQTL 3.94e-03 -0.0408 0.0141 0.00306 0.0 0.392
ENSG00000136011 STAB2 -935712 pQTL 0.0195 0.0537 0.0229 0.0 0.0 0.391

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111670 GNPTAB 820602 4.21e-07 2.56e-07 1.6e-07 2.57e-07 9.29e-08 1.5e-07 3.42e-07 9.07e-08 2.66e-07 1.65e-07 3.66e-07 2.11e-07 4.11e-07 9.15e-08 1.71e-07 1.75e-07 1.85e-07 3.39e-07 2.17e-07 1.15e-07 1.8e-07 2.76e-07 2.26e-07 1.04e-07 3.7e-07 2.33e-07 2.52e-07 1.97e-07 2.4e-07 3.15e-07 1.86e-07 7.33e-08 5.31e-08 1.21e-07 2.32e-07 7.86e-08 9.11e-08 9.33e-08 5.86e-08 2.56e-08 6.31e-08 2.15e-07 4.36e-08 2.02e-08 1.41e-07 1.61e-08 7.89e-08 1.17e-08 6.36e-08
ENSG00000136048 \N 773981 5.14e-07 3.11e-07 1.85e-07 2.92e-07 1.1e-07 1.57e-07 3.94e-07 1.09e-07 3.17e-07 2.01e-07 4.64e-07 2.55e-07 4.88e-07 1.01e-07 2.26e-07 2.08e-07 2.77e-07 3.79e-07 2.57e-07 1.43e-07 1.92e-07 3.13e-07 2.63e-07 1.25e-07 4.46e-07 2.39e-07 2.94e-07 2.44e-07 2.84e-07 4.1e-07 1.95e-07 5.69e-08 5.37e-08 1.19e-07 2.82e-07 1.16e-07 1.15e-07 1.1e-07 4.23e-08 2.17e-08 8.55e-08 2.65e-07 5.58e-08 1.1e-08 1.71e-07 1.37e-08 9.95e-08 2.25e-08 6.03e-08