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Genes within 1Mb (chr12:102569772:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 88028 sc-eQTL 6.59e-01 0.0168 0.038 0.5 B L1
ENSG00000075188 NUP37 449652 sc-eQTL 5.79e-01 0.0367 0.066 0.5 B L1
ENSG00000111666 CHPT1 872825 sc-eQTL 8.40e-01 0.0081 0.0402 0.5 B L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.67e-01 0.0172 0.0581 0.5 B L1
ENSG00000120860 WASHC3 507623 sc-eQTL 9.60e-01 0.00228 0.0454 0.5 B L1
ENSG00000136048 DRAM1 692192 sc-eQTL 9.01e-01 0.0064 0.0516 0.5 B L1
ENSG00000139351 SYCP3 830300 sc-eQTL 8.00e-01 -0.0208 0.0819 0.5 B L1
ENSG00000179088 C12orf42 -926238 sc-eQTL 4.51e-01 0.0528 0.0699 0.5 B L1
ENSG00000185480 PARPBP 449587 sc-eQTL 6.81e-01 0.0323 0.0784 0.5 B L1
ENSG00000281344 HELLPAR 372187 sc-eQTL 5.95e-01 0.0389 0.0731 0.5 B L1
ENSG00000075188 NUP37 449652 sc-eQTL 6.69e-01 0.0264 0.0616 0.5 CD4T L1
ENSG00000111666 CHPT1 872825 sc-eQTL 3.86e-01 0.0722 0.083 0.5 CD4T L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.21e-01 0.00573 0.0577 0.5 CD4T L1
ENSG00000120860 WASHC3 507623 sc-eQTL 2.52e-01 0.05 0.0435 0.5 CD4T L1
ENSG00000179088 C12orf42 -926238 sc-eQTL 9.86e-01 0.00146 0.0805 0.5 CD4T L1
ENSG00000075188 NUP37 449652 sc-eQTL 6.71e-01 0.032 0.0752 0.5 CD8T L1
ENSG00000111666 CHPT1 872825 sc-eQTL 4.09e-01 0.0674 0.0814 0.5 CD8T L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.63e-01 -0.0025 0.0535 0.5 CD8T L1
ENSG00000120860 WASHC3 507623 sc-eQTL 2.88e-01 0.0563 0.0528 0.5 CD8T L1
ENSG00000136048 DRAM1 692192 sc-eQTL 7.95e-01 0.0198 0.0759 0.5 CD8T L1
ENSG00000179088 C12orf42 -926238 sc-eQTL 8.46e-01 0.0167 0.0861 0.5 CD8T L1
ENSG00000075188 NUP37 449652 sc-eQTL 5.23e-01 0.0548 0.0858 0.5 DC L1
ENSG00000111666 CHPT1 872825 sc-eQTL 6.17e-01 -0.0394 0.0785 0.5 DC L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.92e-01 -0.000863 0.0864 0.5 DC L1
ENSG00000120860 WASHC3 507623 sc-eQTL 4.73e-01 -0.0592 0.0824 0.5 DC L1
ENSG00000136048 DRAM1 692192 sc-eQTL 2.76e-01 0.0741 0.0679 0.5 DC L1
ENSG00000179088 C12orf42 -926238 sc-eQTL 6.54e-01 -0.0345 0.0769 0.5 DC L1
ENSG00000185480 PARPBP 449587 sc-eQTL 7.74e-01 0.0257 0.0897 0.5 DC L1
ENSG00000075188 NUP37 449652 sc-eQTL 4.70e-01 -0.0506 0.0698 0.5 Mono L1
ENSG00000111666 CHPT1 872825 sc-eQTL 3.56e-01 0.0546 0.0591 0.5 Mono L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.40e-01 -0.0348 0.0742 0.5 Mono L1
ENSG00000120860 WASHC3 507623 sc-eQTL 9.55e-01 0.00375 0.067 0.5 Mono L1
ENSG00000136048 DRAM1 692192 sc-eQTL 2.96e-01 0.0571 0.0545 0.5 Mono L1
ENSG00000075188 NUP37 449652 sc-eQTL 3.04e-01 -0.079 0.0766 0.5 NK L1
ENSG00000111666 CHPT1 872825 sc-eQTL 8.53e-01 0.0132 0.0712 0.5 NK L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.66e-01 0.00224 0.0517 0.5 NK L1
ENSG00000120860 WASHC3 507623 sc-eQTL 5.68e-01 0.0329 0.0575 0.5 NK L1
ENSG00000136048 DRAM1 692192 sc-eQTL 6.65e-01 0.0355 0.0819 0.5 NK L1
ENSG00000185480 PARPBP 449587 sc-eQTL 5.72e-01 0.0544 0.0961 0.5 NK L1
ENSG00000017427 IGF1 88028 sc-eQTL 6.66e-01 -0.0125 0.0289 0.5 Other_T L1
ENSG00000075188 NUP37 449652 sc-eQTL 7.73e-01 0.0159 0.0551 0.5 Other_T L1
ENSG00000111666 CHPT1 872825 sc-eQTL 4.09e-01 0.0666 0.0804 0.5 Other_T L1
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.50e-02 -0.107 0.0576 0.5 Other_T L1
ENSG00000120860 WASHC3 507623 sc-eQTL 3.74e-01 0.0523 0.0587 0.5 Other_T L1
ENSG00000136048 DRAM1 692192 sc-eQTL 6.14e-01 -0.0356 0.0705 0.5 Other_T L1
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.38e-02 0.161 0.0829 0.5 Other_T L1
ENSG00000185480 PARPBP 449587 sc-eQTL 2.81e-01 0.0634 0.0586 0.5 Other_T L1
ENSG00000281344 HELLPAR 372187 sc-eQTL 3.96e-01 0.058 0.0682 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 88028 sc-eQTL 1.77e-02 -0.0438 0.0183 0.515 B_Activated L2
ENSG00000075188 NUP37 449652 sc-eQTL 2.38e-01 0.114 0.0962 0.515 B_Activated L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.96e-01 0.0746 0.0711 0.515 B_Activated L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 5.25e-01 0.0645 0.101 0.515 B_Activated L2
ENSG00000120860 WASHC3 507623 sc-eQTL 6.95e-01 -0.0379 0.0965 0.515 B_Activated L2
ENSG00000136048 DRAM1 692192 sc-eQTL 8.43e-01 -0.0192 0.0969 0.515 B_Activated L2
ENSG00000139351 SYCP3 830300 sc-eQTL 1.35e-01 -0.119 0.0791 0.515 B_Activated L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 7.48e-01 -0.0272 0.0845 0.515 B_Activated L2
ENSG00000185480 PARPBP 449587 sc-eQTL 2.38e-01 -0.0945 0.0798 0.515 B_Activated L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 3.84e-01 -0.0656 0.0751 0.515 B_Activated L2
ENSG00000017427 IGF1 88028 sc-eQTL 7.33e-01 0.0133 0.039 0.5 B_Intermediate L2
ENSG00000075188 NUP37 449652 sc-eQTL 1.25e-01 0.149 0.0966 0.5 B_Intermediate L2
ENSG00000111666 CHPT1 872825 sc-eQTL 4.39e-01 -0.0403 0.052 0.5 B_Intermediate L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 2.61e-01 -0.0867 0.0768 0.5 B_Intermediate L2
ENSG00000120860 WASHC3 507623 sc-eQTL 8.11e-02 0.139 0.079 0.5 B_Intermediate L2
ENSG00000136048 DRAM1 692192 sc-eQTL 6.26e-01 0.0417 0.0854 0.5 B_Intermediate L2
ENSG00000139351 SYCP3 830300 sc-eQTL 2.44e-01 0.105 0.0895 0.5 B_Intermediate L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 6.84e-01 -0.035 0.0857 0.5 B_Intermediate L2
ENSG00000185480 PARPBP 449587 sc-eQTL 5.83e-01 0.0518 0.0942 0.5 B_Intermediate L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 5.32e-02 0.174 0.0896 0.5 B_Intermediate L2
ENSG00000017427 IGF1 88028 sc-eQTL 2.83e-01 -0.0381 0.0354 0.504 B_Memory L2
ENSG00000075188 NUP37 449652 sc-eQTL 8.60e-01 -0.0166 0.0939 0.504 B_Memory L2
ENSG00000111666 CHPT1 872825 sc-eQTL 3.73e-01 -0.0546 0.0612 0.504 B_Memory L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 5.74e-01 0.0472 0.0838 0.504 B_Memory L2
ENSG00000120860 WASHC3 507623 sc-eQTL 3.21e-01 -0.0812 0.0817 0.504 B_Memory L2
ENSG00000136048 DRAM1 692192 sc-eQTL 3.82e-01 -0.0752 0.0858 0.504 B_Memory L2
ENSG00000139351 SYCP3 830300 sc-eQTL 2.23e-01 -0.108 0.0881 0.504 B_Memory L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 2.43e-01 0.104 0.0886 0.504 B_Memory L2
ENSG00000185480 PARPBP 449587 sc-eQTL 4.08e-01 0.0748 0.0903 0.504 B_Memory L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 6.20e-01 -0.0408 0.0823 0.504 B_Memory L2
ENSG00000017427 IGF1 88028 sc-eQTL 1.20e-01 -0.0746 0.0478 0.5 B_Naive1 L2
ENSG00000075188 NUP37 449652 sc-eQTL 1.51e-01 0.125 0.0865 0.5 B_Naive1 L2
ENSG00000111666 CHPT1 872825 sc-eQTL 1.68e-01 0.0622 0.045 0.5 B_Naive1 L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.74e-01 0.0184 0.0639 0.5 B_Naive1 L2
ENSG00000120860 WASHC3 507623 sc-eQTL 7.06e-01 -0.0242 0.0641 0.5 B_Naive1 L2
ENSG00000136048 DRAM1 692192 sc-eQTL 4.32e-01 0.0546 0.0694 0.5 B_Naive1 L2
ENSG00000139351 SYCP3 830300 sc-eQTL 1.96e-01 -0.122 0.094 0.5 B_Naive1 L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 3.85e-01 0.0792 0.091 0.5 B_Naive1 L2
ENSG00000185480 PARPBP 449587 sc-eQTL 9.13e-01 0.0101 0.0919 0.5 B_Naive1 L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 4.38e-01 -0.0668 0.0859 0.5 B_Naive1 L2
ENSG00000017427 IGF1 88028 sc-eQTL 9.15e-02 -0.0723 0.0426 0.502 B_Naive2 L2
ENSG00000075188 NUP37 449652 sc-eQTL 7.70e-01 0.0258 0.088 0.502 B_Naive2 L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.85e-01 0.0503 0.047 0.502 B_Naive2 L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.84e-01 -0.0106 0.073 0.502 B_Naive2 L2
ENSG00000120860 WASHC3 507623 sc-eQTL 8.92e-01 -0.011 0.0809 0.502 B_Naive2 L2
ENSG00000136048 DRAM1 692192 sc-eQTL 3.78e-01 0.0706 0.08 0.502 B_Naive2 L2
ENSG00000139351 SYCP3 830300 sc-eQTL 2.56e-01 0.0958 0.0841 0.502 B_Naive2 L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 2.73e-01 0.0998 0.0907 0.502 B_Naive2 L2
ENSG00000185480 PARPBP 449587 sc-eQTL 9.45e-01 -0.00668 0.0973 0.502 B_Naive2 L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 4.24e-01 -0.067 0.0837 0.502 B_Naive2 L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.74e-01 -0.0822 0.0923 0.5 CD4_CTL L2
ENSG00000111666 CHPT1 872825 sc-eQTL 7.74e-01 -0.0267 0.0927 0.5 CD4_CTL L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 1.73e-01 -0.11 0.0806 0.5 CD4_CTL L2
ENSG00000120860 WASHC3 507623 sc-eQTL 6.64e-01 -0.0393 0.0905 0.5 CD4_CTL L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 2.35e-01 0.0999 0.0838 0.5 CD4_CTL L2
ENSG00000075188 NUP37 449652 sc-eQTL 6.64e-01 -0.0308 0.0708 0.5 CD4_Naive L2
ENSG00000111666 CHPT1 872825 sc-eQTL 3.83e-01 0.0712 0.0816 0.5 CD4_Naive L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.01e-01 0.0159 0.063 0.5 CD4_Naive L2
ENSG00000120860 WASHC3 507623 sc-eQTL 1.76e-01 0.0703 0.0517 0.5 CD4_Naive L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 2.66e-01 0.0931 0.0835 0.5 CD4_Naive L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.24e-02 0.157 0.0729 0.5 CD4_TCM L2
ENSG00000111666 CHPT1 872825 sc-eQTL 1.28e-01 0.129 0.0846 0.5 CD4_TCM L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 4.18e-01 -0.0534 0.0657 0.5 CD4_TCM L2
ENSG00000120860 WASHC3 507623 sc-eQTL 5.88e-01 0.0274 0.0506 0.5 CD4_TCM L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 1.54e-01 -0.122 0.0853 0.5 CD4_TCM L2
ENSG00000075188 NUP37 449652 sc-eQTL 4.61e-01 0.0653 0.0883 0.5 CD4_TEM L2
ENSG00000111666 CHPT1 872825 sc-eQTL 4.98e-01 -0.0578 0.085 0.5 CD4_TEM L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.64e-01 -0.0141 0.0819 0.5 CD4_TEM L2
ENSG00000120860 WASHC3 507623 sc-eQTL 3.68e-02 -0.156 0.0742 0.5 CD4_TEM L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 9.10e-01 -0.0104 0.0925 0.5 CD4_TEM L2
ENSG00000075188 NUP37 449652 sc-eQTL 7.23e-01 -0.0282 0.0796 0.5 CD8_CTL L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.90e-01 0.0864 0.0814 0.5 CD8_CTL L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 5.31e-01 0.0409 0.0652 0.5 CD8_CTL L2
ENSG00000120860 WASHC3 507623 sc-eQTL 4.63e-01 0.0547 0.0744 0.5 CD8_CTL L2
ENSG00000136048 DRAM1 692192 sc-eQTL 7.42e-01 0.0305 0.0927 0.5 CD8_CTL L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.61e-01 0.0521 0.0894 0.5 CD8_CTL L2
ENSG00000075188 NUP37 449652 sc-eQTL 5.69e-01 0.0481 0.0842 0.5 CD8_Naive L2
ENSG00000111666 CHPT1 872825 sc-eQTL 4.29e-01 0.0663 0.0837 0.5 CD8_Naive L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.78e-02 0.124 0.0748 0.5 CD8_Naive L2
ENSG00000120860 WASHC3 507623 sc-eQTL 1.32e-01 0.086 0.0569 0.5 CD8_Naive L2
ENSG00000136048 DRAM1 692192 sc-eQTL 9.26e-01 -0.00823 0.0883 0.5 CD8_Naive L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 8.63e-01 0.015 0.0871 0.5 CD8_Naive L2
ENSG00000075188 NUP37 449652 sc-eQTL 7.68e-01 -0.0273 0.0922 0.495 CD8_TCM L2
ENSG00000111666 CHPT1 872825 sc-eQTL 9.06e-01 0.00976 0.0827 0.495 CD8_TCM L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.83e-01 -0.0236 0.0855 0.495 CD8_TCM L2
ENSG00000120860 WASHC3 507623 sc-eQTL 6.81e-01 0.0338 0.082 0.495 CD8_TCM L2
ENSG00000136048 DRAM1 692192 sc-eQTL 6.70e-02 0.163 0.0887 0.495 CD8_TCM L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.85e-01 -0.0481 0.088 0.495 CD8_TCM L2
ENSG00000075188 NUP37 449652 sc-eQTL 4.76e-01 0.063 0.0882 0.498 CD8_TEM L2
ENSG00000111666 CHPT1 872825 sc-eQTL 7.89e-01 0.0224 0.0835 0.498 CD8_TEM L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 2.65e-01 -0.0997 0.0892 0.498 CD8_TEM L2
ENSG00000120860 WASHC3 507623 sc-eQTL 3.91e-01 0.0689 0.0801 0.498 CD8_TEM L2
ENSG00000136048 DRAM1 692192 sc-eQTL 1.74e-01 -0.12 0.0881 0.498 CD8_TEM L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.30e-01 -0.0554 0.0881 0.498 CD8_TEM L2
ENSG00000017427 IGF1 88028 sc-eQTL 1.70e-01 -0.0435 0.0316 0.5 MAIT L2
ENSG00000075188 NUP37 449652 sc-eQTL 7.53e-01 0.028 0.089 0.5 MAIT L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.40e-01 0.102 0.0865 0.5 MAIT L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 1.99e-01 -0.0987 0.0766 0.5 MAIT L2
ENSG00000120860 WASHC3 507623 sc-eQTL 7.00e-02 0.141 0.0776 0.5 MAIT L2
ENSG00000136048 DRAM1 692192 sc-eQTL 3.04e-01 -0.0913 0.0885 0.5 MAIT L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 8.78e-01 -0.0128 0.0831 0.5 MAIT L2
ENSG00000185480 PARPBP 449587 sc-eQTL 3.38e-01 0.0832 0.0867 0.5 MAIT L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 2.85e-01 0.0822 0.0767 0.5 MAIT L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.33e-01 0.0943 0.0972 0.504 NK_CD56bright L2
ENSG00000111666 CHPT1 872825 sc-eQTL 8.16e-01 -0.0164 0.0705 0.504 NK_CD56bright L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 5.09e-01 0.0539 0.0814 0.504 NK_CD56bright L2
ENSG00000120860 WASHC3 507623 sc-eQTL 1.90e-01 0.11 0.0836 0.504 NK_CD56bright L2
ENSG00000136048 DRAM1 692192 sc-eQTL 9.35e-01 0.00726 0.0884 0.504 NK_CD56bright L2
ENSG00000185480 PARPBP 449587 sc-eQTL 7.10e-01 0.0347 0.0933 0.504 NK_CD56bright L2
ENSG00000075188 NUP37 449652 sc-eQTL 7.88e-03 -0.223 0.0833 0.502 NK_CD56dim L2
ENSG00000111666 CHPT1 872825 sc-eQTL 4.85e-01 -0.0578 0.0827 0.502 NK_CD56dim L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.24e-01 0.0307 0.0625 0.502 NK_CD56dim L2
ENSG00000120860 WASHC3 507623 sc-eQTL 7.78e-01 0.0203 0.072 0.502 NK_CD56dim L2
ENSG00000136048 DRAM1 692192 sc-eQTL 8.42e-01 -0.0174 0.0874 0.502 NK_CD56dim L2
ENSG00000185480 PARPBP 449587 sc-eQTL 6.58e-01 -0.0436 0.0983 0.502 NK_CD56dim L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.27e-01 0.0874 0.089 0.502 NK_HLA L2
ENSG00000111666 CHPT1 872825 sc-eQTL 3.45e-02 0.193 0.0905 0.502 NK_HLA L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.58e-01 0.0326 0.0735 0.502 NK_HLA L2
ENSG00000120860 WASHC3 507623 sc-eQTL 9.35e-01 0.00746 0.0913 0.502 NK_HLA L2
ENSG00000136048 DRAM1 692192 sc-eQTL 8.75e-01 0.0148 0.0938 0.502 NK_HLA L2
ENSG00000185480 PARPBP 449587 sc-eQTL 1.44e-01 0.135 0.0917 0.502 NK_HLA L2
ENSG00000075188 NUP37 449652 sc-eQTL 9.23e-01 0.00837 0.0868 0.502 NK_cytokine L2
ENSG00000111666 CHPT1 872825 sc-eQTL 3.77e-01 0.0718 0.0811 0.502 NK_cytokine L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.06e-01 0.0233 0.0617 0.502 NK_cytokine L2
ENSG00000120860 WASHC3 507623 sc-eQTL 7.96e-01 0.0177 0.0681 0.502 NK_cytokine L2
ENSG00000136048 DRAM1 692192 sc-eQTL 4.92e-01 0.0611 0.0887 0.502 NK_cytokine L2
ENSG00000185480 PARPBP 449587 sc-eQTL 1.23e-01 0.147 0.0953 0.502 NK_cytokine L2
ENSG00000017427 IGF1 88028 sc-eQTL 5.36e-01 -0.0402 0.0648 0.53 PB L2
ENSG00000075188 NUP37 449652 sc-eQTL 9.95e-01 0.000495 0.0874 0.53 PB L2
ENSG00000111666 CHPT1 872825 sc-eQTL 1.08e-01 0.109 0.067 0.53 PB L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.77e-01 -0.0276 0.0973 0.53 PB L2
ENSG00000120860 WASHC3 507623 sc-eQTL 9.14e-01 0.0086 0.0793 0.53 PB L2
ENSG00000136048 DRAM1 692192 sc-eQTL 8.61e-01 -0.0141 0.0805 0.53 PB L2
ENSG00000139351 SYCP3 830300 sc-eQTL 5.62e-01 -0.0543 0.0933 0.53 PB L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.46e-01 -0.0504 0.0833 0.53 PB L2
ENSG00000185480 PARPBP 449587 sc-eQTL 1.66e-01 0.118 0.0849 0.53 PB L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 3.98e-01 0.0671 0.079 0.53 PB L2
ENSG00000017427 IGF1 88028 sc-eQTL 6.76e-02 -0.0575 0.0313 0.498 Pro_T L2
ENSG00000075188 NUP37 449652 sc-eQTL 4.25e-01 0.0508 0.0636 0.498 Pro_T L2
ENSG00000111666 CHPT1 872825 sc-eQTL 9.87e-01 0.00137 0.0844 0.498 Pro_T L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 1.80e-01 -0.0835 0.0622 0.498 Pro_T L2
ENSG00000120860 WASHC3 507623 sc-eQTL 7.56e-01 -0.0228 0.0733 0.498 Pro_T L2
ENSG00000136048 DRAM1 692192 sc-eQTL 2.08e-01 0.0791 0.0626 0.498 Pro_T L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 2.09e-01 0.102 0.0806 0.498 Pro_T L2
ENSG00000185480 PARPBP 449587 sc-eQTL 8.05e-01 0.0144 0.0582 0.498 Pro_T L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 5.00e-01 0.043 0.0636 0.498 Pro_T L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.04e-01 0.0936 0.0909 0.5 Treg L2
ENSG00000111666 CHPT1 872825 sc-eQTL 5.81e-01 0.0523 0.0948 0.5 Treg L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.59e-01 -0.0366 0.0828 0.5 Treg L2
ENSG00000120860 WASHC3 507623 sc-eQTL 3.50e-01 0.0708 0.0756 0.5 Treg L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 3.86e-01 -0.0667 0.0769 0.5 Treg L2
ENSG00000075188 NUP37 449652 sc-eQTL 5.38e-01 -0.0525 0.0851 0.51 cDC L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.64e-01 -0.0928 0.0828 0.51 cDC L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.81e-01 -0.00249 0.107 0.51 cDC L2
ENSG00000120860 WASHC3 507623 sc-eQTL 1.25e-01 -0.145 0.094 0.51 cDC L2
ENSG00000136048 DRAM1 692192 sc-eQTL 1.94e-01 0.0956 0.0734 0.51 cDC L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 8.47e-01 -0.0128 0.066 0.51 cDC L2
ENSG00000185480 PARPBP 449587 sc-eQTL 1.90e-01 0.11 0.0837 0.51 cDC L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.12e-01 -0.0806 0.0795 0.5 cMono_IL1B L2
ENSG00000111666 CHPT1 872825 sc-eQTL 2.34e-01 0.0715 0.0599 0.5 cMono_IL1B L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.85e-01 -0.0116 0.0797 0.5 cMono_IL1B L2
ENSG00000120860 WASHC3 507623 sc-eQTL 6.52e-01 -0.0313 0.0692 0.5 cMono_IL1B L2
ENSG00000136048 DRAM1 692192 sc-eQTL 5.61e-01 0.0344 0.059 0.5 cMono_IL1B L2
ENSG00000075188 NUP37 449652 sc-eQTL 3.70e-01 -0.0782 0.087 0.5 cMono_S100A L2
ENSG00000111666 CHPT1 872825 sc-eQTL 4.92e-01 0.0459 0.0668 0.5 cMono_S100A L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 9.93e-01 0.000753 0.0813 0.5 cMono_S100A L2
ENSG00000120860 WASHC3 507623 sc-eQTL 4.58e-01 -0.0614 0.0826 0.5 cMono_S100A L2
ENSG00000136048 DRAM1 692192 sc-eQTL 2.99e-01 0.067 0.0643 0.5 cMono_S100A L2
ENSG00000075188 NUP37 449652 sc-eQTL 6.44e-01 0.055 0.119 0.491 gdT L2
ENSG00000111666 CHPT1 872825 sc-eQTL 6.87e-01 -0.0449 0.111 0.491 gdT L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 3.24e-01 -0.0828 0.0836 0.491 gdT L2
ENSG00000120860 WASHC3 507623 sc-eQTL 9.03e-01 -0.0132 0.108 0.491 gdT L2
ENSG00000136048 DRAM1 692192 sc-eQTL 4.76e-02 0.217 0.109 0.491 gdT L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 5.13e-01 -0.0709 0.108 0.491 gdT L2
ENSG00000185480 PARPBP 449587 sc-eQTL 9.90e-01 0.00136 0.108 0.491 gdT L2
ENSG00000281344 HELLPAR 372187 sc-eQTL 1.55e-01 0.14 0.0983 0.491 gdT L2
ENSG00000075188 NUP37 449652 sc-eQTL 4.16e-01 0.071 0.0871 0.502 intMono L2
ENSG00000111666 CHPT1 872825 sc-eQTL 3.11e-01 -0.0809 0.0796 0.502 intMono L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.42e-01 -0.0309 0.0937 0.502 intMono L2
ENSG00000120860 WASHC3 507623 sc-eQTL 2.97e-01 0.0916 0.0875 0.502 intMono L2
ENSG00000136048 DRAM1 692192 sc-eQTL 6.81e-01 0.0315 0.0767 0.502 intMono L2
ENSG00000075188 NUP37 449652 sc-eQTL 2.93e-01 0.0909 0.0862 0.5 ncMono L2
ENSG00000111666 CHPT1 872825 sc-eQTL 1.30e-01 0.121 0.0793 0.5 ncMono L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.65e-01 0.0163 0.0956 0.5 ncMono L2
ENSG00000120860 WASHC3 507623 sc-eQTL 4.34e-01 -0.0605 0.0771 0.5 ncMono L2
ENSG00000136048 DRAM1 692192 sc-eQTL 7.86e-01 -0.0195 0.0719 0.5 ncMono L2
ENSG00000075188 NUP37 449652 sc-eQTL 9.00e-01 0.0142 0.113 0.489 pDC L2
ENSG00000111666 CHPT1 872825 sc-eQTL 5.52e-01 -0.0586 0.0982 0.489 pDC L2
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.05e-01 0.0394 0.104 0.489 pDC L2
ENSG00000120860 WASHC3 507623 sc-eQTL 3.59e-01 0.0873 0.0948 0.489 pDC L2
ENSG00000136048 DRAM1 692192 sc-eQTL 7.95e-01 0.0191 0.0735 0.489 pDC L2
ENSG00000179088 C12orf42 -926238 sc-eQTL 3.88e-01 -0.0845 0.0976 0.489 pDC L2
ENSG00000185480 PARPBP 449587 sc-eQTL 5.57e-01 -0.0574 0.0975 0.489 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 88028 sc-eQTL 8.54e-01 -0.00819 0.0446 0.5 B_Memory LOneK1K
ENSG00000075188 NUP37 449652 sc-eQTL 1.72e-01 0.122 0.0891 0.5 B_Memory LOneK1K
ENSG00000111666 CHPT1 872825 sc-eQTL 4.26e-01 -0.0375 0.047 0.5 B_Memory LOneK1K
ENSG00000111670 GNPTAB 738813 sc-eQTL 7.00e-01 -0.0285 0.074 0.5 B_Memory LOneK1K
ENSG00000120860 WASHC3 507623 sc-eQTL 3.42e-01 0.0612 0.0642 0.5 B_Memory LOneK1K
ENSG00000136048 DRAM1 692192 sc-eQTL 2.80e-01 -0.0832 0.0769 0.5 B_Memory LOneK1K
ENSG00000139351 SYCP3 830300 sc-eQTL 7.67e-01 -0.0264 0.0888 0.5 B_Memory LOneK1K
ENSG00000179088 C12orf42 -926238 sc-eQTL 7.24e-01 0.0246 0.0696 0.5 B_Memory LOneK1K
ENSG00000185480 PARPBP 449587 sc-eQTL 3.10e-01 0.0944 0.0928 0.5 B_Memory LOneK1K
ENSG00000281344 HELLPAR 372187 sc-eQTL 5.24e-01 0.0589 0.0921 0.5 B_Memory LOneK1K
ENSG00000017427 IGF1 88028 sc-eQTL 1.32e-01 -0.0765 0.0506 0.5 B_Naive LOneK1K
ENSG00000075188 NUP37 449652 sc-eQTL 3.88e-01 0.0719 0.0831 0.5 B_Naive LOneK1K
ENSG00000111666 CHPT1 872825 sc-eQTL 1.71e-01 0.0562 0.0409 0.5 B_Naive LOneK1K
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.43e-01 0.0273 0.0588 0.5 B_Naive LOneK1K
ENSG00000120860 WASHC3 507623 sc-eQTL 7.86e-01 -0.0167 0.0615 0.5 B_Naive LOneK1K
ENSG00000136048 DRAM1 692192 sc-eQTL 2.39e-01 0.0759 0.0643 0.5 B_Naive LOneK1K
ENSG00000139351 SYCP3 830300 sc-eQTL 9.92e-01 -0.000985 0.0931 0.5 B_Naive LOneK1K
ENSG00000179088 C12orf42 -926238 sc-eQTL 3.28e-01 0.0867 0.0883 0.5 B_Naive LOneK1K
ENSG00000185480 PARPBP 449587 sc-eQTL 9.94e-01 0.000673 0.0948 0.5 B_Naive LOneK1K
ENSG00000281344 HELLPAR 372187 sc-eQTL 5.09e-01 -0.0571 0.0862 0.5 B_Naive LOneK1K
ENSG00000075188 NUP37 449652 sc-eQTL 2.36e-01 -0.0874 0.0735 0.5 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 872825 sc-eQTL 3.37e-01 0.0572 0.0595 0.5 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.86e-01 -0.031 0.0767 0.5 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 507623 sc-eQTL 8.41e-01 -0.0135 0.0675 0.5 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 692192 sc-eQTL 3.39e-01 0.053 0.0552 0.5 CD14_Mono LOneK1K
ENSG00000075188 NUP37 449652 sc-eQTL 2.85e-01 0.0899 0.0839 0.498 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 872825 sc-eQTL 3.93e-01 0.0627 0.0734 0.498 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 738813 sc-eQTL 6.40e-01 -0.0417 0.0889 0.498 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 507623 sc-eQTL 9.69e-01 -0.00283 0.0738 0.498 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 692192 sc-eQTL 6.79e-01 0.0263 0.0636 0.498 CD16_Mono LOneK1K
ENSG00000075188 NUP37 449652 sc-eQTL 3.08e-01 -0.0827 0.0809 0.502 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 872825 sc-eQTL 8.99e-01 0.0101 0.0791 0.502 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 738813 sc-eQTL 8.38e-01 0.0111 0.0542 0.502 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 507623 sc-eQTL 9.04e-01 0.00752 0.0625 0.502 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 692192 sc-eQTL 7.39e-01 0.028 0.0839 0.502 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 449587 sc-eQTL 3.41e-01 0.094 0.0985 0.502 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075188 NUP37 449652 eQTL 0.0204 0.0392 0.0169 0.0 0.0 0.484
ENSG00000111666 CHPT1 872825 eQTL 1.28e-02 0.0611 0.0245 0.0 0.0 0.484
ENSG00000139351 SYCP3 830303 eQTL 0.0258 -0.0776 0.0348 0.0 0.0 0.484

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina