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Genes within 1Mb (chr12:102564088:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 82344 sc-eQTL 9.52e-01 0.0035 0.0581 0.876 B L1
ENSG00000075188 NUP37 443968 sc-eQTL 4.38e-01 0.0784 0.101 0.876 B L1
ENSG00000111666 CHPT1 867141 sc-eQTL 8.62e-01 -0.0107 0.0614 0.876 B L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.20e-01 0.00894 0.0889 0.876 B L1
ENSG00000120860 WASHC3 501939 sc-eQTL 5.51e-01 -0.0415 0.0695 0.876 B L1
ENSG00000136048 DRAM1 686508 sc-eQTL 2.84e-01 -0.0844 0.0786 0.876 B L1
ENSG00000139351 SYCP3 824616 sc-eQTL 6.72e-01 -0.0532 0.125 0.876 B L1
ENSG00000179088 C12orf42 -931922 sc-eQTL 8.55e-02 0.184 0.106 0.876 B L1
ENSG00000185480 PARPBP 443903 sc-eQTL 6.49e-01 0.0547 0.12 0.876 B L1
ENSG00000281344 HELLPAR 366503 sc-eQTL 3.09e-01 -0.114 0.112 0.876 B L1
ENSG00000075188 NUP37 443968 sc-eQTL 4.72e-01 -0.0662 0.092 0.876 CD4T L1
ENSG00000111666 CHPT1 867141 sc-eQTL 3.84e-01 -0.108 0.124 0.876 CD4T L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 4.80e-01 0.061 0.0861 0.876 CD4T L1
ENSG00000120860 WASHC3 501939 sc-eQTL 3.28e-02 0.139 0.0646 0.876 CD4T L1
ENSG00000179088 C12orf42 -931922 sc-eQTL 8.28e-01 -0.0262 0.12 0.876 CD4T L1
ENSG00000075188 NUP37 443968 sc-eQTL 4.60e-01 -0.0845 0.114 0.876 CD8T L1
ENSG00000111666 CHPT1 867141 sc-eQTL 2.60e-01 -0.139 0.123 0.876 CD8T L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.63e-02 0.135 0.0807 0.876 CD8T L1
ENSG00000120860 WASHC3 501939 sc-eQTL 7.74e-01 0.0231 0.0804 0.876 CD8T L1
ENSG00000136048 DRAM1 686508 sc-eQTL 4.60e-01 -0.0852 0.115 0.876 CD8T L1
ENSG00000179088 C12orf42 -931922 sc-eQTL 2.20e-01 -0.16 0.13 0.876 CD8T L1
ENSG00000075188 NUP37 443968 sc-eQTL 2.51e-02 0.287 0.127 0.874 DC L1
ENSG00000111666 CHPT1 867141 sc-eQTL 1.49e-01 -0.17 0.117 0.874 DC L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 1.52e-01 0.186 0.129 0.874 DC L1
ENSG00000120860 WASHC3 501939 sc-eQTL 3.88e-01 -0.107 0.124 0.874 DC L1
ENSG00000136048 DRAM1 686508 sc-eQTL 1.14e-01 0.161 0.102 0.874 DC L1
ENSG00000179088 C12orf42 -931922 sc-eQTL 9.84e-01 -0.00233 0.116 0.874 DC L1
ENSG00000185480 PARPBP 443903 sc-eQTL 7.95e-01 0.035 0.135 0.874 DC L1
ENSG00000075188 NUP37 443968 sc-eQTL 8.74e-01 0.0171 0.108 0.876 Mono L1
ENSG00000111666 CHPT1 867141 sc-eQTL 4.62e-01 -0.0673 0.0912 0.876 Mono L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 3.62e-01 0.104 0.114 0.876 Mono L1
ENSG00000120860 WASHC3 501939 sc-eQTL 9.99e-01 7.6e-05 0.103 0.876 Mono L1
ENSG00000136048 DRAM1 686508 sc-eQTL 1.06e-02 0.214 0.083 0.876 Mono L1
ENSG00000075188 NUP37 443968 sc-eQTL 7.56e-01 -0.0365 0.117 0.876 NK L1
ENSG00000111666 CHPT1 867141 sc-eQTL 6.21e-02 -0.202 0.108 0.876 NK L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 8.34e-01 0.0166 0.0789 0.876 NK L1
ENSG00000120860 WASHC3 501939 sc-eQTL 8.40e-02 0.152 0.0873 0.876 NK L1
ENSG00000136048 DRAM1 686508 sc-eQTL 4.41e-01 -0.0965 0.125 0.876 NK L1
ENSG00000185480 PARPBP 443903 sc-eQTL 4.82e-01 0.103 0.147 0.876 NK L1
ENSG00000017427 IGF1 82344 sc-eQTL 9.54e-01 0.00256 0.044 0.876 Other_T L1
ENSG00000075188 NUP37 443968 sc-eQTL 5.36e-01 0.0519 0.0839 0.876 Other_T L1
ENSG00000111666 CHPT1 867141 sc-eQTL 1.03e-01 -0.2 0.122 0.876 Other_T L1
ENSG00000111670 GNPTAB 733129 sc-eQTL 1.71e-01 0.121 0.0881 0.876 Other_T L1
ENSG00000120860 WASHC3 501939 sc-eQTL 6.31e-01 -0.043 0.0895 0.876 Other_T L1
ENSG00000136048 DRAM1 686508 sc-eQTL 9.37e-01 0.00856 0.107 0.876 Other_T L1
ENSG00000179088 C12orf42 -931922 sc-eQTL 2.91e-01 0.134 0.127 0.876 Other_T L1
ENSG00000185480 PARPBP 443903 sc-eQTL 3.42e-01 -0.0851 0.0893 0.876 Other_T L1
ENSG00000281344 HELLPAR 366503 sc-eQTL 5.30e-01 -0.0653 0.104 0.876 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 82344 sc-eQTL 9.89e-01 0.000376 0.0272 0.87 B_Activated L2
ENSG00000075188 NUP37 443968 sc-eQTL 7.90e-01 0.0376 0.141 0.87 B_Activated L2
ENSG00000111666 CHPT1 867141 sc-eQTL 6.33e-01 -0.0499 0.104 0.87 B_Activated L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 2.49e-01 0.171 0.148 0.87 B_Activated L2
ENSG00000120860 WASHC3 501939 sc-eQTL 9.59e-01 -0.00724 0.141 0.87 B_Activated L2
ENSG00000136048 DRAM1 686508 sc-eQTL 6.85e-01 0.0576 0.142 0.87 B_Activated L2
ENSG00000139351 SYCP3 824616 sc-eQTL 4.57e-01 -0.0867 0.116 0.87 B_Activated L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 9.43e-01 0.00889 0.124 0.87 B_Activated L2
ENSG00000185480 PARPBP 443903 sc-eQTL 2.28e-01 -0.141 0.117 0.87 B_Activated L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 9.87e-01 0.00185 0.11 0.87 B_Activated L2
ENSG00000017427 IGF1 82344 sc-eQTL 9.93e-01 0.000515 0.0569 0.876 B_Intermediate L2
ENSG00000075188 NUP37 443968 sc-eQTL 1.75e-01 0.192 0.141 0.876 B_Intermediate L2
ENSG00000111666 CHPT1 867141 sc-eQTL 7.03e-01 -0.0291 0.0761 0.876 B_Intermediate L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.40e-01 -0.00851 0.113 0.876 B_Intermediate L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.45e-01 0.0537 0.116 0.876 B_Intermediate L2
ENSG00000136048 DRAM1 686508 sc-eQTL 9.79e-01 -0.00329 0.125 0.876 B_Intermediate L2
ENSG00000139351 SYCP3 824616 sc-eQTL 1.76e-01 -0.177 0.131 0.876 B_Intermediate L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 2.57e-03 0.374 0.123 0.876 B_Intermediate L2
ENSG00000185480 PARPBP 443903 sc-eQTL 9.88e-01 0.00201 0.138 0.876 B_Intermediate L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 3.00e-01 0.137 0.132 0.876 B_Intermediate L2
ENSG00000017427 IGF1 82344 sc-eQTL 7.26e-01 0.0184 0.0523 0.875 B_Memory L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.04e-01 -0.0718 0.138 0.875 B_Memory L2
ENSG00000111666 CHPT1 867141 sc-eQTL 6.44e-01 0.0418 0.0902 0.875 B_Memory L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 6.99e-01 -0.0479 0.124 0.875 B_Memory L2
ENSG00000120860 WASHC3 501939 sc-eQTL 5.00e-01 -0.0815 0.121 0.875 B_Memory L2
ENSG00000136048 DRAM1 686508 sc-eQTL 8.49e-01 0.024 0.127 0.875 B_Memory L2
ENSG00000139351 SYCP3 824616 sc-eQTL 8.00e-01 0.033 0.13 0.875 B_Memory L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 4.60e-02 0.26 0.13 0.875 B_Memory L2
ENSG00000185480 PARPBP 443903 sc-eQTL 5.18e-01 -0.0863 0.133 0.875 B_Memory L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 9.62e-01 0.00583 0.121 0.875 B_Memory L2
ENSG00000017427 IGF1 82344 sc-eQTL 3.33e-01 -0.072 0.0742 0.876 B_Naive1 L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.65e-01 0.0584 0.135 0.876 B_Naive1 L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.99e-01 -0.059 0.0699 0.876 B_Naive1 L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 4.85e-01 0.0691 0.0989 0.876 B_Naive1 L2
ENSG00000120860 WASHC3 501939 sc-eQTL 9.43e-01 -0.00714 0.0993 0.876 B_Naive1 L2
ENSG00000136048 DRAM1 686508 sc-eQTL 9.50e-01 -0.00675 0.108 0.876 B_Naive1 L2
ENSG00000139351 SYCP3 824616 sc-eQTL 2.05e-01 -0.185 0.146 0.876 B_Naive1 L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 7.07e-02 0.254 0.14 0.876 B_Naive1 L2
ENSG00000185480 PARPBP 443903 sc-eQTL 3.16e-01 0.143 0.142 0.876 B_Naive1 L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 4.81e-01 0.0939 0.133 0.876 B_Naive1 L2
ENSG00000017427 IGF1 82344 sc-eQTL 8.74e-01 -0.0103 0.0651 0.876 B_Naive2 L2
ENSG00000075188 NUP37 443968 sc-eQTL 7.95e-01 0.0348 0.133 0.876 B_Naive2 L2
ENSG00000111666 CHPT1 867141 sc-eQTL 7.02e-01 -0.0274 0.0714 0.876 B_Naive2 L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 7.51e-01 -0.0352 0.111 0.876 B_Naive2 L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.25e-01 -0.0601 0.123 0.876 B_Naive2 L2
ENSG00000136048 DRAM1 686508 sc-eQTL 8.34e-01 0.0256 0.122 0.876 B_Naive2 L2
ENSG00000139351 SYCP3 824616 sc-eQTL 3.61e-01 0.117 0.128 0.876 B_Naive2 L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 6.16e-01 0.0692 0.138 0.876 B_Naive2 L2
ENSG00000185480 PARPBP 443903 sc-eQTL 4.80e-01 0.104 0.147 0.876 B_Naive2 L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 2.46e-01 -0.148 0.127 0.876 B_Naive2 L2
ENSG00000075188 NUP37 443968 sc-eQTL 3.29e-01 -0.138 0.141 0.875 CD4_CTL L2
ENSG00000111666 CHPT1 867141 sc-eQTL 8.01e-01 -0.0357 0.141 0.875 CD4_CTL L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 2.08e-01 0.155 0.123 0.875 CD4_CTL L2
ENSG00000120860 WASHC3 501939 sc-eQTL 1.86e-01 0.182 0.137 0.875 CD4_CTL L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.62e-01 -0.0744 0.128 0.875 CD4_CTL L2
ENSG00000075188 NUP37 443968 sc-eQTL 4.82e-01 -0.0743 0.106 0.876 CD4_Naive L2
ENSG00000111666 CHPT1 867141 sc-eQTL 5.74e-01 -0.0686 0.122 0.876 CD4_Naive L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 5.71e-01 0.0532 0.0939 0.876 CD4_Naive L2
ENSG00000120860 WASHC3 501939 sc-eQTL 9.66e-02 0.128 0.077 0.876 CD4_Naive L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 7.36e-01 -0.0422 0.125 0.876 CD4_Naive L2
ENSG00000075188 NUP37 443968 sc-eQTL 9.47e-01 -0.00738 0.112 0.876 CD4_TCM L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.58e-01 -0.119 0.129 0.876 CD4_TCM L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 4.42e-01 -0.0769 0.0998 0.876 CD4_TCM L2
ENSG00000120860 WASHC3 501939 sc-eQTL 1.76e-01 0.104 0.0764 0.876 CD4_TCM L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.10e-01 -0.0857 0.13 0.876 CD4_TCM L2
ENSG00000075188 NUP37 443968 sc-eQTL 9.74e-01 -0.00423 0.132 0.876 CD4_TEM L2
ENSG00000111666 CHPT1 867141 sc-eQTL 9.43e-02 -0.212 0.126 0.876 CD4_TEM L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 6.05e-01 0.0634 0.122 0.876 CD4_TEM L2
ENSG00000120860 WASHC3 501939 sc-eQTL 8.38e-01 0.0229 0.112 0.876 CD4_TEM L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 9.64e-01 -0.00631 0.138 0.876 CD4_TEM L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.61e-01 0.0538 0.122 0.876 CD8_CTL L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.98e-01 -0.106 0.125 0.876 CD8_CTL L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 5.71e-01 0.057 0.1 0.876 CD8_CTL L2
ENSG00000120860 WASHC3 501939 sc-eQTL 4.81e-01 -0.0808 0.115 0.876 CD8_CTL L2
ENSG00000136048 DRAM1 686508 sc-eQTL 8.24e-01 -0.0317 0.143 0.876 CD8_CTL L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.22e-01 0.0882 0.138 0.876 CD8_CTL L2
ENSG00000075188 NUP37 443968 sc-eQTL 2.44e-01 -0.149 0.128 0.876 CD8_Naive L2
ENSG00000111666 CHPT1 867141 sc-eQTL 6.13e-01 -0.0643 0.127 0.876 CD8_Naive L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 2.59e-01 0.129 0.114 0.876 CD8_Naive L2
ENSG00000120860 WASHC3 501939 sc-eQTL 5.48e-01 0.0522 0.0868 0.876 CD8_Naive L2
ENSG00000136048 DRAM1 686508 sc-eQTL 5.29e-01 -0.0845 0.134 0.876 CD8_Naive L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 6.50e-01 -0.0602 0.132 0.876 CD8_Naive L2
ENSG00000075188 NUP37 443968 sc-eQTL 2.30e-01 -0.169 0.14 0.877 CD8_TCM L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.82e-01 -0.11 0.126 0.877 CD8_TCM L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 8.32e-01 0.0278 0.131 0.877 CD8_TCM L2
ENSG00000120860 WASHC3 501939 sc-eQTL 3.45e-01 -0.118 0.125 0.877 CD8_TCM L2
ENSG00000136048 DRAM1 686508 sc-eQTL 5.72e-01 0.0772 0.136 0.877 CD8_TCM L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 6.94e-01 -0.0529 0.134 0.877 CD8_TCM L2
ENSG00000075188 NUP37 443968 sc-eQTL 9.26e-01 -0.013 0.139 0.872 CD8_TEM L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.49e-01 -0.123 0.131 0.872 CD8_TEM L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 2.44e-01 0.164 0.14 0.872 CD8_TEM L2
ENSG00000120860 WASHC3 501939 sc-eQTL 2.01e-01 -0.162 0.126 0.872 CD8_TEM L2
ENSG00000136048 DRAM1 686508 sc-eQTL 9.66e-01 -0.00604 0.139 0.872 CD8_TEM L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 3.74e-01 -0.124 0.139 0.872 CD8_TEM L2
ENSG00000017427 IGF1 82344 sc-eQTL 3.96e-01 -0.0413 0.0485 0.877 MAIT L2
ENSG00000075188 NUP37 443968 sc-eQTL 1.62e-01 -0.19 0.136 0.877 MAIT L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.32e-01 -0.129 0.132 0.877 MAIT L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 1.79e-01 0.158 0.117 0.877 MAIT L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.99e-01 -0.0462 0.12 0.877 MAIT L2
ENSG00000136048 DRAM1 686508 sc-eQTL 7.86e-01 -0.0369 0.136 0.877 MAIT L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.15e-01 -0.0829 0.127 0.877 MAIT L2
ENSG00000185480 PARPBP 443903 sc-eQTL 5.90e-01 -0.0717 0.133 0.877 MAIT L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 9.86e-01 -0.00202 0.118 0.877 MAIT L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.67e-01 -0.0632 0.147 0.873 NK_CD56bright L2
ENSG00000111666 CHPT1 867141 sc-eQTL 2.83e-02 -0.232 0.105 0.873 NK_CD56bright L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 6.40e-01 -0.0575 0.123 0.873 NK_CD56bright L2
ENSG00000120860 WASHC3 501939 sc-eQTL 9.99e-01 -0.000145 0.127 0.873 NK_CD56bright L2
ENSG00000136048 DRAM1 686508 sc-eQTL 9.79e-01 0.00357 0.133 0.873 NK_CD56bright L2
ENSG00000185480 PARPBP 443903 sc-eQTL 4.95e-01 -0.0961 0.141 0.873 NK_CD56bright L2
ENSG00000075188 NUP37 443968 sc-eQTL 5.96e-01 -0.0689 0.13 0.875 NK_CD56dim L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.45e-01 -0.185 0.126 0.875 NK_CD56dim L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 4.94e-01 0.0657 0.0959 0.875 NK_CD56dim L2
ENSG00000120860 WASHC3 501939 sc-eQTL 3.34e-01 0.107 0.11 0.875 NK_CD56dim L2
ENSG00000136048 DRAM1 686508 sc-eQTL 6.09e-01 -0.0687 0.134 0.875 NK_CD56dim L2
ENSG00000185480 PARPBP 443903 sc-eQTL 5.34e-01 0.094 0.151 0.875 NK_CD56dim L2
ENSG00000075188 NUP37 443968 sc-eQTL 7.65e-01 0.0393 0.132 0.872 NK_HLA L2
ENSG00000111666 CHPT1 867141 sc-eQTL 5.65e-01 -0.0777 0.135 0.872 NK_HLA L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 8.05e-01 0.0268 0.109 0.872 NK_HLA L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.95e-01 0.0528 0.135 0.872 NK_HLA L2
ENSG00000136048 DRAM1 686508 sc-eQTL 6.62e-01 0.0606 0.138 0.872 NK_HLA L2
ENSG00000185480 PARPBP 443903 sc-eQTL 1.01e-01 0.223 0.135 0.872 NK_HLA L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.08e-01 -0.0668 0.13 0.875 NK_cytokine L2
ENSG00000111666 CHPT1 867141 sc-eQTL 9.40e-02 -0.204 0.121 0.875 NK_cytokine L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.82e-01 0.00212 0.0926 0.875 NK_cytokine L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.21e-01 0.0507 0.102 0.875 NK_cytokine L2
ENSG00000136048 DRAM1 686508 sc-eQTL 7.06e-01 0.0503 0.133 0.875 NK_cytokine L2
ENSG00000185480 PARPBP 443903 sc-eQTL 2.76e-01 -0.157 0.144 0.875 NK_cytokine L2
ENSG00000017427 IGF1 82344 sc-eQTL 8.37e-01 0.0235 0.114 0.896 PB L2
ENSG00000075188 NUP37 443968 sc-eQTL 5.30e-01 0.0964 0.153 0.896 PB L2
ENSG00000111666 CHPT1 867141 sc-eQTL 9.17e-02 -0.2 0.117 0.896 PB L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.54e-03 0.437 0.166 0.896 PB L2
ENSG00000120860 WASHC3 501939 sc-eQTL 1.44e-01 0.203 0.138 0.896 PB L2
ENSG00000136048 DRAM1 686508 sc-eQTL 6.22e-01 -0.0696 0.141 0.896 PB L2
ENSG00000139351 SYCP3 824616 sc-eQTL 2.38e-01 -0.193 0.163 0.896 PB L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 4.26e-01 -0.117 0.146 0.896 PB L2
ENSG00000185480 PARPBP 443903 sc-eQTL 3.15e-01 -0.151 0.15 0.896 PB L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 2.79e-01 0.15 0.138 0.896 PB L2
ENSG00000017427 IGF1 82344 sc-eQTL 1.08e-01 0.0758 0.047 0.876 Pro_T L2
ENSG00000075188 NUP37 443968 sc-eQTL 6.24e-01 0.0468 0.0954 0.876 Pro_T L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.86e-01 -0.167 0.126 0.876 Pro_T L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 1.24e-01 0.144 0.093 0.876 Pro_T L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.22e-01 0.0542 0.11 0.876 Pro_T L2
ENSG00000136048 DRAM1 686508 sc-eQTL 7.83e-01 0.026 0.0942 0.876 Pro_T L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.95e-01 0.0646 0.121 0.876 Pro_T L2
ENSG00000185480 PARPBP 443903 sc-eQTL 3.27e-01 -0.0855 0.0871 0.876 Pro_T L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 4.22e-01 -0.0767 0.0953 0.876 Pro_T L2
ENSG00000075188 NUP37 443968 sc-eQTL 8.94e-01 0.0182 0.136 0.876 Treg L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.93e-01 -0.184 0.141 0.876 Treg L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.26e-01 -0.0114 0.124 0.876 Treg L2
ENSG00000120860 WASHC3 501939 sc-eQTL 5.30e-01 0.0712 0.113 0.876 Treg L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 3.20e-01 0.114 0.115 0.876 Treg L2
ENSG00000075188 NUP37 443968 sc-eQTL 5.89e-01 -0.0668 0.123 0.871 cDC L2
ENSG00000111666 CHPT1 867141 sc-eQTL 6.85e-01 -0.0489 0.12 0.871 cDC L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 3.62e-02 0.324 0.153 0.871 cDC L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.54e-01 -0.0615 0.137 0.871 cDC L2
ENSG00000136048 DRAM1 686508 sc-eQTL 3.25e-01 0.105 0.107 0.871 cDC L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 6.49e-01 0.0436 0.0955 0.871 cDC L2
ENSG00000185480 PARPBP 443903 sc-eQTL 9.47e-01 -0.00806 0.122 0.871 cDC L2
ENSG00000075188 NUP37 443968 sc-eQTL 2.01e-01 0.156 0.122 0.876 cMono_IL1B L2
ENSG00000111666 CHPT1 867141 sc-eQTL 2.50e-01 -0.106 0.092 0.876 cMono_IL1B L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 7.31e-02 0.219 0.121 0.876 cMono_IL1B L2
ENSG00000120860 WASHC3 501939 sc-eQTL 2.56e-01 -0.121 0.106 0.876 cMono_IL1B L2
ENSG00000136048 DRAM1 686508 sc-eQTL 2.27e-01 0.109 0.0903 0.876 cMono_IL1B L2
ENSG00000075188 NUP37 443968 sc-eQTL 4.75e-02 -0.262 0.131 0.876 cMono_S100A L2
ENSG00000111666 CHPT1 867141 sc-eQTL 9.58e-01 0.00541 0.102 0.876 cMono_S100A L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 1.68e-01 -0.17 0.123 0.876 cMono_S100A L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.42e-01 0.0586 0.126 0.876 cMono_S100A L2
ENSG00000136048 DRAM1 686508 sc-eQTL 2.28e-02 0.222 0.097 0.876 cMono_S100A L2
ENSG00000075188 NUP37 443968 sc-eQTL 1.24e-01 0.259 0.167 0.873 gdT L2
ENSG00000111666 CHPT1 867141 sc-eQTL 3.96e-01 -0.134 0.158 0.873 gdT L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 3.51e-01 0.111 0.119 0.873 gdT L2
ENSG00000120860 WASHC3 501939 sc-eQTL 3.11e-01 -0.156 0.153 0.873 gdT L2
ENSG00000136048 DRAM1 686508 sc-eQTL 5.51e-01 -0.0934 0.156 0.873 gdT L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 5.47e-01 0.0927 0.154 0.873 gdT L2
ENSG00000185480 PARPBP 443903 sc-eQTL 6.73e-02 0.28 0.152 0.873 gdT L2
ENSG00000281344 HELLPAR 366503 sc-eQTL 3.79e-01 0.124 0.14 0.873 gdT L2
ENSG00000075188 NUP37 443968 sc-eQTL 7.70e-01 0.0391 0.133 0.871 intMono L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.83e-01 -0.162 0.122 0.871 intMono L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 8.52e-01 0.0267 0.143 0.871 intMono L2
ENSG00000120860 WASHC3 501939 sc-eQTL 7.78e-01 0.0379 0.134 0.871 intMono L2
ENSG00000136048 DRAM1 686508 sc-eQTL 1.84e-01 0.156 0.117 0.871 intMono L2
ENSG00000075188 NUP37 443968 sc-eQTL 3.32e-01 0.128 0.131 0.873 ncMono L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.66e-01 -0.168 0.121 0.873 ncMono L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 8.08e-01 0.0355 0.145 0.873 ncMono L2
ENSG00000120860 WASHC3 501939 sc-eQTL 4.22e-02 0.238 0.116 0.873 ncMono L2
ENSG00000136048 DRAM1 686508 sc-eQTL 7.50e-01 0.035 0.109 0.873 ncMono L2
ENSG00000075188 NUP37 443968 sc-eQTL 4.22e-02 0.333 0.162 0.881 pDC L2
ENSG00000111666 CHPT1 867141 sc-eQTL 1.14e-01 -0.226 0.142 0.881 pDC L2
ENSG00000111670 GNPTAB 733129 sc-eQTL 9.33e-01 -0.0128 0.152 0.881 pDC L2
ENSG00000120860 WASHC3 501939 sc-eQTL 6.04e-01 0.0718 0.138 0.881 pDC L2
ENSG00000136048 DRAM1 686508 sc-eQTL 7.61e-01 -0.0326 0.107 0.881 pDC L2
ENSG00000179088 C12orf42 -931922 sc-eQTL 9.67e-01 0.00599 0.143 0.881 pDC L2
ENSG00000185480 PARPBP 443903 sc-eQTL 9.00e-01 0.0179 0.142 0.881 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 82344 sc-eQTL 5.99e-01 0.035 0.0665 0.876 B_Memory LOneK1K
ENSG00000075188 NUP37 443968 sc-eQTL 4.02e-01 0.112 0.133 0.876 B_Memory LOneK1K
ENSG00000111666 CHPT1 867141 sc-eQTL 9.55e-01 -0.00401 0.0703 0.876 B_Memory LOneK1K
ENSG00000111670 GNPTAB 733129 sc-eQTL 7.99e-01 0.0281 0.111 0.876 B_Memory LOneK1K
ENSG00000120860 WASHC3 501939 sc-eQTL 9.89e-01 0.00134 0.0961 0.876 B_Memory LOneK1K
ENSG00000136048 DRAM1 686508 sc-eQTL 6.74e-01 -0.0485 0.115 0.876 B_Memory LOneK1K
ENSG00000139351 SYCP3 824616 sc-eQTL 6.09e-01 -0.068 0.133 0.876 B_Memory LOneK1K
ENSG00000179088 C12orf42 -931922 sc-eQTL 7.39e-03 0.276 0.102 0.876 B_Memory LOneK1K
ENSG00000185480 PARPBP 443903 sc-eQTL 7.42e-01 -0.0457 0.139 0.876 B_Memory LOneK1K
ENSG00000281344 HELLPAR 366503 sc-eQTL 3.75e-01 0.122 0.137 0.876 B_Memory LOneK1K
ENSG00000017427 IGF1 82344 sc-eQTL 2.05e-01 -0.0996 0.0783 0.876 B_Naive LOneK1K
ENSG00000075188 NUP37 443968 sc-eQTL 3.32e-01 0.125 0.128 0.876 B_Naive LOneK1K
ENSG00000111666 CHPT1 867141 sc-eQTL 7.44e-01 -0.0207 0.0635 0.876 B_Naive LOneK1K
ENSG00000111670 GNPTAB 733129 sc-eQTL 7.54e-01 -0.0286 0.0909 0.876 B_Naive LOneK1K
ENSG00000120860 WASHC3 501939 sc-eQTL 6.36e-01 -0.045 0.0951 0.876 B_Naive LOneK1K
ENSG00000136048 DRAM1 686508 sc-eQTL 8.09e-01 -0.0242 0.0997 0.876 B_Naive LOneK1K
ENSG00000139351 SYCP3 824616 sc-eQTL 5.45e-01 -0.087 0.144 0.876 B_Naive LOneK1K
ENSG00000179088 C12orf42 -931922 sc-eQTL 1.61e-01 0.192 0.136 0.876 B_Naive LOneK1K
ENSG00000185480 PARPBP 443903 sc-eQTL 3.45e-01 0.138 0.146 0.876 B_Naive LOneK1K
ENSG00000281344 HELLPAR 366503 sc-eQTL 4.43e-01 -0.102 0.133 0.876 B_Naive LOneK1K
ENSG00000075188 NUP37 443968 sc-eQTL 7.94e-01 -0.0294 0.113 0.876 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 867141 sc-eQTL 4.99e-01 -0.0617 0.0911 0.876 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 733129 sc-eQTL 5.41e-01 0.0719 0.117 0.876 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 501939 sc-eQTL 4.33e-01 -0.0811 0.103 0.876 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 686508 sc-eQTL 1.69e-02 0.201 0.0836 0.876 CD14_Mono LOneK1K
ENSG00000075188 NUP37 443968 sc-eQTL 2.81e-01 0.14 0.129 0.875 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 867141 sc-eQTL 2.26e-01 -0.137 0.113 0.875 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 733129 sc-eQTL 3.10e-01 0.139 0.137 0.875 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 501939 sc-eQTL 1.93e-01 0.148 0.113 0.875 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 686508 sc-eQTL 1.10e-01 0.156 0.0974 0.875 CD16_Mono LOneK1K
ENSG00000075188 NUP37 443968 sc-eQTL 4.40e-01 -0.0954 0.123 0.875 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 867141 sc-eQTL 7.99e-02 -0.211 0.12 0.875 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 733129 sc-eQTL 7.84e-01 0.0226 0.0826 0.875 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 501939 sc-eQTL 2.34e-01 0.113 0.0949 0.875 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 686508 sc-eQTL 5.98e-01 -0.0674 0.128 0.875 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 443903 sc-eQTL 6.64e-01 0.0654 0.15 0.875 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111670 GNPTAB 733129 eQTL 2.62e-03 0.063 0.0209 0.00263 0.0 0.117
ENSG00000183395 PMCH 366255 pQTL 0.0387 -0.0889 0.043 0.0 0.0 0.122

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075188 \N 443968 7.76e-07 4.97e-07 7.6e-08 4.08e-07 1.07e-07 2.01e-07 5.2e-07 8.86e-08 3.32e-07 2.14e-07 5.93e-07 3.11e-07 8.37e-07 1.1e-07 2.15e-07 1.63e-07 1.35e-07 2.93e-07 1.36e-07 1.24e-07 1.61e-07 3.49e-07 2.81e-07 1.13e-07 7.01e-07 2e-07 2.57e-07 2.24e-07 2.98e-07 2.75e-07 2.73e-07 7.03e-08 5.42e-08 1.38e-07 3.08e-07 6.23e-08 1.09e-07 7.86e-08 4.44e-08 6.05e-08 9.91e-08 4.68e-07 2.71e-08 1.1e-08 9.79e-08 1.31e-08 7.36e-08 1.79e-08 5.65e-08
ENSG00000111670 GNPTAB 733129 2.8e-07 1.35e-07 4.47e-08 2.07e-07 9.16e-08 8.45e-08 1.73e-07 5.48e-08 1.45e-07 6.08e-08 1.63e-07 1.05e-07 1.95e-07 7.37e-08 5.72e-08 7.49e-08 4.09e-08 1.27e-07 5.97e-08 4.89e-08 1.21e-07 1.25e-07 1.44e-07 2.93e-08 1.65e-07 1.21e-07 1.18e-07 1.01e-07 1.23e-07 1.07e-07 1.08e-07 3.39e-08 3.59e-08 9.3e-08 2.97e-08 3.04e-08 5.35e-08 8.76e-08 6.67e-08 4.19e-08 6.21e-08 1.46e-07 5.24e-08 1.07e-08 3.4e-08 1.68e-08 1.2e-07 2.02e-09 4.8e-08