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Genes within 1Mb (chr12:102534728:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 52984 sc-eQTL 6.41e-01 0.0348 0.0744 0.929 B L1
ENSG00000075188 NUP37 414608 sc-eQTL 8.16e-01 0.0301 0.129 0.929 B L1
ENSG00000111666 CHPT1 837781 sc-eQTL 4.58e-01 -0.0584 0.0786 0.929 B L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.95e-01 -0.119 0.114 0.929 B L1
ENSG00000120860 WASHC3 472579 sc-eQTL 3.04e-01 -0.0915 0.0888 0.929 B L1
ENSG00000136048 DRAM1 657148 sc-eQTL 5.40e-01 -0.0619 0.101 0.929 B L1
ENSG00000139351 SYCP3 795256 sc-eQTL 4.81e-01 -0.113 0.16 0.929 B L1
ENSG00000179088 C12orf42 -961282 sc-eQTL 5.94e-01 0.0731 0.137 0.929 B L1
ENSG00000185480 PARPBP 414543 sc-eQTL 9.09e-01 0.0176 0.154 0.929 B L1
ENSG00000281344 HELLPAR 337143 sc-eQTL 5.66e-01 0.0824 0.143 0.929 B L1
ENSG00000075188 NUP37 414608 sc-eQTL 1.15e-01 -0.183 0.115 0.929 CD4T L1
ENSG00000111666 CHPT1 837781 sc-eQTL 9.41e-01 -0.0117 0.157 0.929 CD4T L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.87e-01 -0.116 0.108 0.929 CD4T L1
ENSG00000120860 WASHC3 472579 sc-eQTL 2.29e-02 0.186 0.0813 0.929 CD4T L1
ENSG00000179088 C12orf42 -961282 sc-eQTL 6.29e-01 0.0735 0.152 0.929 CD4T L1
ENSG00000075188 NUP37 414608 sc-eQTL 6.20e-02 -0.267 0.142 0.929 CD8T L1
ENSG00000111666 CHPT1 837781 sc-eQTL 9.36e-01 0.0125 0.155 0.929 CD8T L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.93e-01 0.0872 0.102 0.929 CD8T L1
ENSG00000120860 WASHC3 472579 sc-eQTL 3.18e-01 0.101 0.101 0.929 CD8T L1
ENSG00000136048 DRAM1 657148 sc-eQTL 8.78e-01 0.0222 0.145 0.929 CD8T L1
ENSG00000179088 C12orf42 -961282 sc-eQTL 5.99e-01 0.0864 0.164 0.929 CD8T L1
ENSG00000075188 NUP37 414608 sc-eQTL 2.16e-02 0.395 0.17 0.932 DC L1
ENSG00000111666 CHPT1 837781 sc-eQTL 4.54e-01 -0.118 0.158 0.932 DC L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.10e-01 0.0418 0.174 0.932 DC L1
ENSG00000120860 WASHC3 472579 sc-eQTL 7.75e-01 -0.0475 0.166 0.932 DC L1
ENSG00000136048 DRAM1 657148 sc-eQTL 7.77e-02 0.241 0.136 0.932 DC L1
ENSG00000179088 C12orf42 -961282 sc-eQTL 7.49e-01 -0.0496 0.155 0.932 DC L1
ENSG00000185480 PARPBP 414543 sc-eQTL 6.72e-01 0.0764 0.18 0.932 DC L1
ENSG00000075188 NUP37 414608 sc-eQTL 7.58e-01 0.0427 0.138 0.929 Mono L1
ENSG00000111666 CHPT1 837781 sc-eQTL 4.38e-01 0.0908 0.117 0.929 Mono L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.73e-01 0.161 0.146 0.929 Mono L1
ENSG00000120860 WASHC3 472579 sc-eQTL 9.25e-01 -0.0125 0.132 0.929 Mono L1
ENSG00000136048 DRAM1 657148 sc-eQTL 3.82e-02 0.223 0.107 0.929 Mono L1
ENSG00000075188 NUP37 414608 sc-eQTL 5.06e-01 0.0994 0.149 0.931 NK L1
ENSG00000111666 CHPT1 837781 sc-eQTL 1.46e-01 -0.201 0.138 0.931 NK L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 7.61e-01 0.0306 0.101 0.931 NK L1
ENSG00000120860 WASHC3 472579 sc-eQTL 4.55e-01 0.0837 0.112 0.931 NK L1
ENSG00000136048 DRAM1 657148 sc-eQTL 3.86e-01 -0.138 0.159 0.931 NK L1
ENSG00000185480 PARPBP 414543 sc-eQTL 2.96e-01 0.195 0.187 0.931 NK L1
ENSG00000017427 IGF1 52984 sc-eQTL 3.57e-01 -0.0514 0.0556 0.929 Other_T L1
ENSG00000075188 NUP37 414608 sc-eQTL 8.85e-02 0.18 0.105 0.929 Other_T L1
ENSG00000111666 CHPT1 837781 sc-eQTL 4.71e-01 -0.112 0.155 0.929 Other_T L1
ENSG00000111670 GNPTAB 703769 sc-eQTL 1.37e-01 0.166 0.111 0.929 Other_T L1
ENSG00000120860 WASHC3 472579 sc-eQTL 6.42e-01 -0.0527 0.113 0.929 Other_T L1
ENSG00000136048 DRAM1 657148 sc-eQTL 4.91e-01 0.0937 0.136 0.929 Other_T L1
ENSG00000179088 C12orf42 -961282 sc-eQTL 8.60e-01 0.0285 0.161 0.929 Other_T L1
ENSG00000185480 PARPBP 414543 sc-eQTL 2.58e-01 -0.128 0.113 0.929 Other_T L1
ENSG00000281344 HELLPAR 337143 sc-eQTL 3.64e-01 -0.12 0.131 0.929 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 52984 sc-eQTL 8.80e-01 0.00525 0.0347 0.923 B_Activated L2
ENSG00000075188 NUP37 414608 sc-eQTL 6.52e-01 -0.0813 0.18 0.923 B_Activated L2
ENSG00000111666 CHPT1 837781 sc-eQTL 2.65e-01 -0.148 0.133 0.923 B_Activated L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.59e-01 0.0337 0.189 0.923 B_Activated L2
ENSG00000120860 WASHC3 472579 sc-eQTL 3.88e-01 -0.156 0.18 0.923 B_Activated L2
ENSG00000136048 DRAM1 657148 sc-eQTL 6.50e-01 -0.0821 0.181 0.923 B_Activated L2
ENSG00000139351 SYCP3 795256 sc-eQTL 6.18e-01 -0.0742 0.148 0.923 B_Activated L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 1.75e-01 -0.214 0.157 0.923 B_Activated L2
ENSG00000185480 PARPBP 414543 sc-eQTL 3.44e-02 -0.315 0.148 0.923 B_Activated L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 7.70e-01 -0.0412 0.14 0.923 B_Activated L2
ENSG00000017427 IGF1 52984 sc-eQTL 5.47e-01 -0.0437 0.0725 0.929 B_Intermediate L2
ENSG00000075188 NUP37 414608 sc-eQTL 8.03e-01 -0.0451 0.181 0.929 B_Intermediate L2
ENSG00000111666 CHPT1 837781 sc-eQTL 2.41e-01 -0.114 0.0967 0.929 B_Intermediate L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 9.14e-01 -0.0154 0.143 0.929 B_Intermediate L2
ENSG00000120860 WASHC3 472579 sc-eQTL 9.03e-01 0.0181 0.148 0.929 B_Intermediate L2
ENSG00000136048 DRAM1 657148 sc-eQTL 2.24e-01 0.193 0.158 0.929 B_Intermediate L2
ENSG00000139351 SYCP3 795256 sc-eQTL 6.17e-02 -0.311 0.166 0.929 B_Intermediate L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 1.85e-03 0.492 0.156 0.929 B_Intermediate L2
ENSG00000185480 PARPBP 414543 sc-eQTL 8.62e-01 0.0304 0.175 0.929 B_Intermediate L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 3.77e-01 0.149 0.168 0.929 B_Intermediate L2
ENSG00000017427 IGF1 52984 sc-eQTL 4.26e-01 -0.0533 0.0669 0.929 B_Memory L2
ENSG00000075188 NUP37 414608 sc-eQTL 6.31e-01 0.0851 0.177 0.929 B_Memory L2
ENSG00000111666 CHPT1 837781 sc-eQTL 9.45e-01 -0.00798 0.116 0.929 B_Memory L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.90e-01 -0.109 0.158 0.929 B_Memory L2
ENSG00000120860 WASHC3 472579 sc-eQTL 3.59e-01 -0.142 0.154 0.929 B_Memory L2
ENSG00000136048 DRAM1 657148 sc-eQTL 4.03e-01 0.135 0.162 0.929 B_Memory L2
ENSG00000139351 SYCP3 795256 sc-eQTL 8.11e-01 -0.0399 0.167 0.929 B_Memory L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 3.96e-01 0.142 0.167 0.929 B_Memory L2
ENSG00000185480 PARPBP 414543 sc-eQTL 8.80e-01 -0.0258 0.171 0.929 B_Memory L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 7.86e-01 -0.0422 0.155 0.929 B_Memory L2
ENSG00000017427 IGF1 52984 sc-eQTL 2.42e-01 -0.11 0.0934 0.929 B_Naive1 L2
ENSG00000075188 NUP37 414608 sc-eQTL 6.42e-01 0.079 0.17 0.929 B_Naive1 L2
ENSG00000111666 CHPT1 837781 sc-eQTL 1.93e-01 -0.115 0.0878 0.929 B_Naive1 L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.23e-01 0.028 0.125 0.929 B_Naive1 L2
ENSG00000120860 WASHC3 472579 sc-eQTL 8.85e-01 0.0182 0.125 0.929 B_Naive1 L2
ENSG00000136048 DRAM1 657148 sc-eQTL 4.29e-01 0.107 0.135 0.929 B_Naive1 L2
ENSG00000139351 SYCP3 795256 sc-eQTL 8.65e-02 -0.315 0.183 0.929 B_Naive1 L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 7.28e-01 0.0619 0.178 0.929 B_Naive1 L2
ENSG00000185480 PARPBP 414543 sc-eQTL 5.17e-02 0.348 0.178 0.929 B_Naive1 L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 1.70e-02 0.398 0.166 0.929 B_Naive1 L2
ENSG00000017427 IGF1 52984 sc-eQTL 8.29e-01 0.0176 0.0816 0.929 B_Naive2 L2
ENSG00000075188 NUP37 414608 sc-eQTL 1.97e-01 -0.215 0.167 0.929 B_Naive2 L2
ENSG00000111666 CHPT1 837781 sc-eQTL 1.06e-01 -0.144 0.089 0.929 B_Naive2 L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 7.18e-01 -0.0501 0.139 0.929 B_Naive2 L2
ENSG00000120860 WASHC3 472579 sc-eQTL 3.95e-01 -0.131 0.154 0.929 B_Naive2 L2
ENSG00000136048 DRAM1 657148 sc-eQTL 7.69e-01 -0.0448 0.152 0.929 B_Naive2 L2
ENSG00000139351 SYCP3 795256 sc-eQTL 2.05e-02 0.37 0.158 0.929 B_Naive2 L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 7.83e-01 -0.0476 0.173 0.929 B_Naive2 L2
ENSG00000185480 PARPBP 414543 sc-eQTL 8.40e-01 -0.0373 0.185 0.929 B_Naive2 L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 1.75e-01 -0.216 0.159 0.929 B_Naive2 L2
ENSG00000075188 NUP37 414608 sc-eQTL 7.33e-01 0.061 0.178 0.927 CD4_CTL L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.75e-01 0.128 0.179 0.927 CD4_CTL L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.02e-01 0.131 0.156 0.927 CD4_CTL L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.52e-01 0.104 0.175 0.927 CD4_CTL L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 4.88e-01 0.113 0.162 0.927 CD4_CTL L2
ENSG00000075188 NUP37 414608 sc-eQTL 1.56e-01 -0.189 0.133 0.929 CD4_Naive L2
ENSG00000111666 CHPT1 837781 sc-eQTL 8.97e-01 -0.02 0.154 0.929 CD4_Naive L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 5.65e-01 -0.0685 0.119 0.929 CD4_Naive L2
ENSG00000120860 WASHC3 472579 sc-eQTL 4.88e-03 0.274 0.0962 0.929 CD4_Naive L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 5.60e-01 -0.0923 0.158 0.929 CD4_Naive L2
ENSG00000075188 NUP37 414608 sc-eQTL 1.59e-01 -0.199 0.141 0.929 CD4_TCM L2
ENSG00000111666 CHPT1 837781 sc-eQTL 6.63e-01 -0.071 0.163 0.929 CD4_TCM L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 1.73e-01 -0.172 0.126 0.929 CD4_TCM L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.12e-01 0.0637 0.0969 0.929 CD4_TCM L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 4.34e-01 -0.128 0.164 0.929 CD4_TCM L2
ENSG00000075188 NUP37 414608 sc-eQTL 3.20e-01 -0.166 0.166 0.929 CD4_TEM L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.72e-01 -0.116 0.16 0.929 CD4_TEM L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.13e-01 0.156 0.154 0.929 CD4_TEM L2
ENSG00000120860 WASHC3 472579 sc-eQTL 7.25e-01 0.0498 0.142 0.929 CD4_TEM L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 2.21e-01 0.213 0.174 0.929 CD4_TEM L2
ENSG00000075188 NUP37 414608 sc-eQTL 2.23e-01 -0.187 0.153 0.929 CD8_CTL L2
ENSG00000111666 CHPT1 837781 sc-eQTL 8.41e-01 -0.0315 0.157 0.929 CD8_CTL L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 6.13e-01 0.0635 0.125 0.929 CD8_CTL L2
ENSG00000120860 WASHC3 472579 sc-eQTL 6.37e-01 -0.0678 0.143 0.929 CD8_CTL L2
ENSG00000136048 DRAM1 657148 sc-eQTL 8.90e-01 0.0247 0.178 0.929 CD8_CTL L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 3.39e-03 0.5 0.169 0.929 CD8_CTL L2
ENSG00000075188 NUP37 414608 sc-eQTL 2.13e-01 -0.201 0.161 0.929 CD8_Naive L2
ENSG00000111666 CHPT1 837781 sc-eQTL 6.21e-01 0.0796 0.161 0.929 CD8_Naive L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 9.70e-01 0.00538 0.144 0.929 CD8_Naive L2
ENSG00000120860 WASHC3 472579 sc-eQTL 3.22e-01 0.109 0.11 0.929 CD8_Naive L2
ENSG00000136048 DRAM1 657148 sc-eQTL 5.47e-01 -0.102 0.169 0.929 CD8_Naive L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 8.08e-01 0.0408 0.167 0.929 CD8_Naive L2
ENSG00000075188 NUP37 414608 sc-eQTL 1.39e-01 -0.251 0.169 0.926 CD8_TCM L2
ENSG00000111666 CHPT1 837781 sc-eQTL 8.37e-01 -0.0314 0.153 0.926 CD8_TCM L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.69e-01 0.142 0.158 0.926 CD8_TCM L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.50e-01 0.0908 0.151 0.926 CD8_TCM L2
ENSG00000136048 DRAM1 657148 sc-eQTL 3.85e-01 0.144 0.165 0.926 CD8_TCM L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 2.32e-01 -0.194 0.162 0.926 CD8_TCM L2
ENSG00000075188 NUP37 414608 sc-eQTL 3.24e-01 -0.177 0.179 0.927 CD8_TEM L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.72e-01 -0.122 0.169 0.927 CD8_TEM L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 7.80e-01 -0.0508 0.181 0.927 CD8_TEM L2
ENSG00000120860 WASHC3 472579 sc-eQTL 4.55e-01 0.122 0.163 0.927 CD8_TEM L2
ENSG00000136048 DRAM1 657148 sc-eQTL 5.25e-01 0.114 0.179 0.927 CD8_TEM L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 4.81e-01 0.126 0.179 0.927 CD8_TEM L2
ENSG00000017427 IGF1 52984 sc-eQTL 3.49e-01 -0.056 0.0597 0.929 MAIT L2
ENSG00000075188 NUP37 414608 sc-eQTL 8.47e-01 -0.0325 0.168 0.929 MAIT L2
ENSG00000111666 CHPT1 837781 sc-eQTL 8.52e-01 -0.0306 0.164 0.929 MAIT L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.03e-01 0.121 0.145 0.929 MAIT L2
ENSG00000120860 WASHC3 472579 sc-eQTL 9.98e-01 0.000341 0.147 0.929 MAIT L2
ENSG00000136048 DRAM1 657148 sc-eQTL 7.02e-01 0.064 0.167 0.929 MAIT L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 8.38e-01 -0.0322 0.157 0.929 MAIT L2
ENSG00000185480 PARPBP 414543 sc-eQTL 4.09e-01 -0.135 0.164 0.929 MAIT L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 8.36e-01 0.0301 0.145 0.929 MAIT L2
ENSG00000075188 NUP37 414608 sc-eQTL 5.19e-01 -0.123 0.191 0.931 NK_CD56bright L2
ENSG00000111666 CHPT1 837781 sc-eQTL 3.40e-01 -0.132 0.138 0.931 NK_CD56bright L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.16e-01 -0.0372 0.16 0.931 NK_CD56bright L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.22e-01 -0.106 0.165 0.931 NK_CD56bright L2
ENSG00000136048 DRAM1 657148 sc-eQTL 8.54e-01 -0.0318 0.173 0.931 NK_CD56bright L2
ENSG00000185480 PARPBP 414543 sc-eQTL 6.62e-01 0.08 0.183 0.931 NK_CD56bright L2
ENSG00000075188 NUP37 414608 sc-eQTL 5.05e-01 0.11 0.165 0.931 NK_CD56dim L2
ENSG00000111666 CHPT1 837781 sc-eQTL 1.92e-01 -0.211 0.161 0.931 NK_CD56dim L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.86e-01 0.106 0.122 0.931 NK_CD56dim L2
ENSG00000120860 WASHC3 472579 sc-eQTL 8.27e-01 0.0307 0.141 0.931 NK_CD56dim L2
ENSG00000136048 DRAM1 657148 sc-eQTL 5.93e-01 -0.0913 0.171 0.931 NK_CD56dim L2
ENSG00000185480 PARPBP 414543 sc-eQTL 7.98e-01 0.0493 0.192 0.931 NK_CD56dim L2
ENSG00000075188 NUP37 414608 sc-eQTL 2.25e-01 0.209 0.171 0.932 NK_HLA L2
ENSG00000111666 CHPT1 837781 sc-eQTL 7.54e-01 -0.0554 0.177 0.932 NK_HLA L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 5.14e-01 0.0928 0.142 0.932 NK_HLA L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.74e-01 -0.0991 0.176 0.932 NK_HLA L2
ENSG00000136048 DRAM1 657148 sc-eQTL 6.59e-01 -0.0798 0.181 0.932 NK_HLA L2
ENSG00000185480 PARPBP 414543 sc-eQTL 2.36e-01 0.211 0.177 0.932 NK_HLA L2
ENSG00000075188 NUP37 414608 sc-eQTL 3.89e-01 -0.142 0.165 0.931 NK_cytokine L2
ENSG00000111666 CHPT1 837781 sc-eQTL 3.75e-01 -0.137 0.154 0.931 NK_cytokine L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.11e-01 -0.0281 0.117 0.931 NK_cytokine L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.56e-01 0.0765 0.13 0.931 NK_cytokine L2
ENSG00000136048 DRAM1 657148 sc-eQTL 4.18e-01 -0.137 0.169 0.931 NK_cytokine L2
ENSG00000185480 PARPBP 414543 sc-eQTL 6.04e-01 -0.0948 0.182 0.931 NK_cytokine L2
ENSG00000017427 IGF1 52984 sc-eQTL 3.35e-01 -0.134 0.139 0.933 PB L2
ENSG00000075188 NUP37 414608 sc-eQTL 7.96e-01 0.0487 0.187 0.933 PB L2
ENSG00000111666 CHPT1 837781 sc-eQTL 3.04e-01 -0.149 0.145 0.933 PB L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.94e-03 0.579 0.202 0.933 PB L2
ENSG00000120860 WASHC3 472579 sc-eQTL 4.47e-01 0.13 0.17 0.933 PB L2
ENSG00000136048 DRAM1 657148 sc-eQTL 6.76e-01 -0.0724 0.173 0.933 PB L2
ENSG00000139351 SYCP3 795256 sc-eQTL 5.37e-01 -0.124 0.2 0.933 PB L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 7.40e-01 -0.0595 0.179 0.933 PB L2
ENSG00000185480 PARPBP 414543 sc-eQTL 7.27e-02 -0.328 0.181 0.933 PB L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 2.24e-01 0.207 0.169 0.933 PB L2
ENSG00000017427 IGF1 52984 sc-eQTL 9.08e-01 0.00701 0.0607 0.928 Pro_T L2
ENSG00000075188 NUP37 414608 sc-eQTL 2.06e-01 0.155 0.122 0.928 Pro_T L2
ENSG00000111666 CHPT1 837781 sc-eQTL 5.66e-01 -0.0933 0.162 0.928 Pro_T L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.38e-01 0.0933 0.12 0.928 Pro_T L2
ENSG00000120860 WASHC3 472579 sc-eQTL 4.87e-01 0.098 0.141 0.928 Pro_T L2
ENSG00000136048 DRAM1 657148 sc-eQTL 5.56e-01 -0.0713 0.121 0.928 Pro_T L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 3.60e-01 -0.142 0.155 0.928 Pro_T L2
ENSG00000185480 PARPBP 414543 sc-eQTL 8.42e-01 -0.0224 0.112 0.928 Pro_T L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 6.18e-01 -0.0612 0.122 0.928 Pro_T L2
ENSG00000075188 NUP37 414608 sc-eQTL 8.81e-01 -0.0255 0.171 0.929 Treg L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.08e-01 -0.147 0.177 0.929 Treg L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 9.25e-01 -0.0147 0.155 0.929 Treg L2
ENSG00000120860 WASHC3 472579 sc-eQTL 9.95e-02 0.234 0.141 0.929 Treg L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 5.48e-02 0.276 0.143 0.929 Treg L2
ENSG00000075188 NUP37 414608 sc-eQTL 5.52e-01 0.0994 0.167 0.932 cDC L2
ENSG00000111666 CHPT1 837781 sc-eQTL 2.33e-01 -0.194 0.162 0.932 cDC L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.05e-01 0.266 0.209 0.932 cDC L2
ENSG00000120860 WASHC3 472579 sc-eQTL 3.37e-01 -0.178 0.185 0.932 cDC L2
ENSG00000136048 DRAM1 657148 sc-eQTL 7.33e-01 0.0493 0.145 0.932 cDC L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 2.35e-01 0.154 0.129 0.932 cDC L2
ENSG00000185480 PARPBP 414543 sc-eQTL 4.49e-01 0.125 0.165 0.932 cDC L2
ENSG00000075188 NUP37 414608 sc-eQTL 6.59e-01 0.0701 0.159 0.929 cMono_IL1B L2
ENSG00000111666 CHPT1 837781 sc-eQTL 9.91e-01 0.0013 0.12 0.929 cMono_IL1B L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.95e-02 0.311 0.158 0.929 cMono_IL1B L2
ENSG00000120860 WASHC3 472579 sc-eQTL 1.19e-01 -0.215 0.137 0.929 cMono_IL1B L2
ENSG00000136048 DRAM1 657148 sc-eQTL 7.45e-02 0.21 0.117 0.929 cMono_IL1B L2
ENSG00000075188 NUP37 414608 sc-eQTL 2.64e-01 -0.193 0.172 0.929 cMono_S100A L2
ENSG00000111666 CHPT1 837781 sc-eQTL 9.27e-02 0.222 0.132 0.929 cMono_S100A L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.17e-01 -0.199 0.16 0.929 cMono_S100A L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.11e-02 0.319 0.162 0.929 cMono_S100A L2
ENSG00000136048 DRAM1 657148 sc-eQTL 2.47e-01 0.148 0.127 0.929 cMono_S100A L2
ENSG00000075188 NUP37 414608 sc-eQTL 6.22e-01 0.101 0.205 0.918 gdT L2
ENSG00000111666 CHPT1 837781 sc-eQTL 2.83e-01 -0.206 0.191 0.918 gdT L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.07e-02 0.311 0.142 0.918 gdT L2
ENSG00000120860 WASHC3 472579 sc-eQTL 2.60e-01 -0.211 0.186 0.918 gdT L2
ENSG00000136048 DRAM1 657148 sc-eQTL 5.29e-01 0.12 0.19 0.918 gdT L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 4.65e-01 0.137 0.187 0.918 gdT L2
ENSG00000185480 PARPBP 414543 sc-eQTL 8.77e-02 0.318 0.185 0.918 gdT L2
ENSG00000281344 HELLPAR 337143 sc-eQTL 6.20e-01 -0.0847 0.171 0.918 gdT L2
ENSG00000075188 NUP37 414608 sc-eQTL 4.21e-01 0.144 0.178 0.929 intMono L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.84e-01 -0.114 0.163 0.929 intMono L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.70e-01 -0.0313 0.192 0.929 intMono L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.22e-01 -0.115 0.179 0.929 intMono L2
ENSG00000136048 DRAM1 657148 sc-eQTL 4.08e-01 0.13 0.157 0.929 intMono L2
ENSG00000075188 NUP37 414608 sc-eQTL 8.24e-01 0.0399 0.179 0.934 ncMono L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.69e-01 -0.119 0.165 0.934 ncMono L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.27e-01 0.0432 0.198 0.934 ncMono L2
ENSG00000120860 WASHC3 472579 sc-eQTL 5.15e-02 0.31 0.158 0.934 ncMono L2
ENSG00000136048 DRAM1 657148 sc-eQTL 8.81e-01 0.0224 0.149 0.934 ncMono L2
ENSG00000075188 NUP37 414608 sc-eQTL 4.59e-02 0.442 0.22 0.938 pDC L2
ENSG00000111666 CHPT1 837781 sc-eQTL 4.03e-01 -0.162 0.193 0.938 pDC L2
ENSG00000111670 GNPTAB 703769 sc-eQTL 8.18e-01 -0.0472 0.205 0.938 pDC L2
ENSG00000120860 WASHC3 472579 sc-eQTL 2.09e-01 0.235 0.186 0.938 pDC L2
ENSG00000136048 DRAM1 657148 sc-eQTL 3.45e-01 -0.137 0.144 0.938 pDC L2
ENSG00000179088 C12orf42 -961282 sc-eQTL 8.43e-01 -0.0382 0.193 0.938 pDC L2
ENSG00000185480 PARPBP 414543 sc-eQTL 7.47e-01 -0.062 0.192 0.938 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 52984 sc-eQTL 7.43e-01 -0.028 0.0852 0.929 B_Memory LOneK1K
ENSG00000075188 NUP37 414608 sc-eQTL 6.80e-01 0.0707 0.171 0.929 B_Memory LOneK1K
ENSG00000111666 CHPT1 837781 sc-eQTL 6.83e-01 -0.0368 0.09 0.929 B_Memory LOneK1K
ENSG00000111670 GNPTAB 703769 sc-eQTL 7.36e-01 -0.0478 0.142 0.929 B_Memory LOneK1K
ENSG00000120860 WASHC3 472579 sc-eQTL 4.49e-01 -0.0932 0.123 0.929 B_Memory LOneK1K
ENSG00000136048 DRAM1 657148 sc-eQTL 4.48e-01 0.112 0.147 0.929 B_Memory LOneK1K
ENSG00000139351 SYCP3 795256 sc-eQTL 2.45e-01 -0.197 0.169 0.929 B_Memory LOneK1K
ENSG00000179088 C12orf42 -961282 sc-eQTL 2.43e-02 0.298 0.132 0.929 B_Memory LOneK1K
ENSG00000185480 PARPBP 414543 sc-eQTL 4.89e-01 -0.123 0.178 0.929 B_Memory LOneK1K
ENSG00000281344 HELLPAR 337143 sc-eQTL 5.40e-01 0.108 0.176 0.929 B_Memory LOneK1K
ENSG00000017427 IGF1 52984 sc-eQTL 2.52e-01 -0.114 0.0994 0.929 B_Naive LOneK1K
ENSG00000075188 NUP37 414608 sc-eQTL 4.77e-01 0.116 0.163 0.929 B_Naive LOneK1K
ENSG00000111666 CHPT1 837781 sc-eQTL 4.34e-01 -0.063 0.0804 0.929 B_Naive LOneK1K
ENSG00000111670 GNPTAB 703769 sc-eQTL 2.13e-01 -0.143 0.115 0.929 B_Naive LOneK1K
ENSG00000120860 WASHC3 472579 sc-eQTL 7.06e-01 -0.0456 0.121 0.929 B_Naive LOneK1K
ENSG00000136048 DRAM1 657148 sc-eQTL 6.86e-01 0.0512 0.126 0.929 B_Naive LOneK1K
ENSG00000139351 SYCP3 795256 sc-eQTL 5.71e-01 -0.103 0.182 0.929 B_Naive LOneK1K
ENSG00000179088 C12orf42 -961282 sc-eQTL 9.72e-01 0.0061 0.173 0.929 B_Naive LOneK1K
ENSG00000185480 PARPBP 414543 sc-eQTL 3.12e-01 0.188 0.185 0.929 B_Naive LOneK1K
ENSG00000281344 HELLPAR 337143 sc-eQTL 6.47e-01 0.0776 0.169 0.929 B_Naive LOneK1K
ENSG00000075188 NUP37 414608 sc-eQTL 8.27e-01 -0.0319 0.146 0.929 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 837781 sc-eQTL 3.61e-01 0.108 0.118 0.929 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 703769 sc-eQTL 3.41e-01 0.145 0.152 0.929 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 472579 sc-eQTL 7.00e-01 -0.0516 0.134 0.929 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 657148 sc-eQTL 2.92e-02 0.238 0.108 0.929 CD14_Mono LOneK1K
ENSG00000075188 NUP37 414608 sc-eQTL 4.85e-01 0.121 0.173 0.931 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 837781 sc-eQTL 8.28e-01 -0.033 0.151 0.931 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 703769 sc-eQTL 4.02e-01 0.154 0.183 0.931 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 472579 sc-eQTL 5.56e-01 0.0897 0.152 0.931 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 657148 sc-eQTL 2.93e-01 0.138 0.131 0.931 CD16_Mono LOneK1K
ENSG00000075188 NUP37 414608 sc-eQTL 5.42e-01 0.0962 0.158 0.931 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 837781 sc-eQTL 1.71e-01 -0.211 0.153 0.931 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 703769 sc-eQTL 7.13e-01 0.0388 0.105 0.931 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 472579 sc-eQTL 6.85e-01 0.0494 0.121 0.931 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 657148 sc-eQTL 4.05e-01 -0.136 0.163 0.931 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 414543 sc-eQTL 6.44e-01 0.0887 0.192 0.931 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000017427 IGF1 52984 eQTL 0.0451 -0.0767 0.0382 0.00129 0.0 0.0775
ENSG00000111670 GNPTAB 703769 eQTL 3.75e-02 0.052 0.025 0.0 0.0 0.0775
ENSG00000183395 PMCH 336895 pQTL 0.0124 -0.136 0.0544 0.00163 0.0 0.0751

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111670 GNPTAB 703769 3.02e-07 1.78e-07 6.26e-08 2.25e-07 9.8e-08 8.21e-08 2.1e-07 6.12e-08 1.71e-07 8.53e-08 1.86e-07 1.19e-07 2.38e-07 8.15e-08 6.53e-08 8.71e-08 6.17e-08 1.77e-07 7.09e-08 6.16e-08 1.33e-07 1.76e-07 1.64e-07 3.07e-08 2.09e-07 1.23e-07 1.23e-07 1.52e-07 1.31e-07 1.05e-07 1.14e-07 5.4e-08 4.87e-08 9.08e-08 3.71e-08 3.3e-08 6.29e-08 8.2e-08 6.57e-08 4.41e-08 5.03e-08 1.62e-07 3.02e-08 1.43e-08 3.2e-08 1.05e-08 7.92e-08 0.0 5.02e-08
ENSG00000258230 \N 760973 2.77e-07 1.56e-07 5.72e-08 2.22e-07 9.79e-08 9.05e-08 1.81e-07 5.56e-08 1.44e-07 6.75e-08 1.61e-07 1.08e-07 1.95e-07 8.13e-08 5.97e-08 7.89e-08 4.25e-08 1.56e-07 6.92e-08 5.33e-08 1.26e-07 1.47e-07 1.58e-07 2.87e-08 1.72e-07 1.26e-07 1.17e-07 1.36e-07 1.22e-07 9.49e-08 1.07e-07 5.01e-08 4.16e-08 9.76e-08 3.52e-08 2.85e-08 6.14e-08 8.68e-08 6.37e-08 3.82e-08 5.13e-08 1.59e-07 4.17e-08 1.1e-08 3.42e-08 6.98e-09 9.29e-08 2.1e-09 4.94e-08