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Genes within 1Mb (chr12:102510741:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 28997 sc-eQTL 6.39e-01 0.0373 0.0794 0.94 B L1
ENSG00000075188 NUP37 390621 sc-eQTL 3.47e-01 0.13 0.138 0.94 B L1
ENSG00000111666 CHPT1 813794 sc-eQTL 9.00e-01 -0.0105 0.084 0.94 B L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 3.76e-01 -0.108 0.121 0.94 B L1
ENSG00000120860 WASHC3 448592 sc-eQTL 5.67e-01 -0.0545 0.095 0.94 B L1
ENSG00000136048 DRAM1 633161 sc-eQTL 7.01e-01 -0.0415 0.108 0.94 B L1
ENSG00000139351 SYCP3 771269 sc-eQTL 5.73e-01 -0.0967 0.171 0.94 B L1
ENSG00000179088 C12orf42 -985269 sc-eQTL 9.50e-01 -0.00928 0.146 0.94 B L1
ENSG00000185480 PARPBP 390556 sc-eQTL 8.97e-01 0.0213 0.164 0.94 B L1
ENSG00000281344 HELLPAR 313156 sc-eQTL 4.92e-01 0.105 0.153 0.94 B L1
ENSG00000075188 NUP37 390621 sc-eQTL 1.18e-01 -0.194 0.123 0.94 CD4T L1
ENSG00000111666 CHPT1 813794 sc-eQTL 6.01e-01 -0.0877 0.167 0.94 CD4T L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 9.18e-01 0.012 0.116 0.94 CD4T L1
ENSG00000120860 WASHC3 448592 sc-eQTL 1.54e-02 0.212 0.0867 0.94 CD4T L1
ENSG00000179088 C12orf42 -985269 sc-eQTL 2.94e-01 0.17 0.162 0.94 CD4T L1
ENSG00000075188 NUP37 390621 sc-eQTL 1.17e-01 -0.24 0.153 0.94 CD8T L1
ENSG00000111666 CHPT1 813794 sc-eQTL 9.51e-01 -0.0102 0.166 0.94 CD8T L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 7.69e-01 0.0321 0.109 0.94 CD8T L1
ENSG00000120860 WASHC3 448592 sc-eQTL 4.72e-02 0.214 0.107 0.94 CD8T L1
ENSG00000136048 DRAM1 633161 sc-eQTL 5.18e-01 -0.1 0.155 0.94 CD8T L1
ENSG00000179088 C12orf42 -985269 sc-eQTL 9.14e-01 0.0189 0.176 0.94 CD8T L1
ENSG00000075188 NUP37 390621 sc-eQTL 6.34e-02 0.325 0.174 0.939 DC L1
ENSG00000111666 CHPT1 813794 sc-eQTL 6.96e-01 -0.0629 0.16 0.939 DC L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 5.45e-01 0.107 0.176 0.939 DC L1
ENSG00000120860 WASHC3 448592 sc-eQTL 3.77e-01 -0.149 0.168 0.939 DC L1
ENSG00000136048 DRAM1 633161 sc-eQTL 1.95e-01 0.18 0.139 0.939 DC L1
ENSG00000179088 C12orf42 -985269 sc-eQTL 8.27e-01 0.0345 0.157 0.939 DC L1
ENSG00000185480 PARPBP 390556 sc-eQTL 4.85e-01 0.128 0.183 0.939 DC L1
ENSG00000075188 NUP37 390621 sc-eQTL 9.37e-01 -0.0115 0.146 0.94 Mono L1
ENSG00000111666 CHPT1 813794 sc-eQTL 8.48e-01 -0.0236 0.124 0.94 Mono L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 3.56e-01 0.143 0.155 0.94 Mono L1
ENSG00000120860 WASHC3 448592 sc-eQTL 1.33e-01 0.21 0.139 0.94 Mono L1
ENSG00000136048 DRAM1 633161 sc-eQTL 5.16e-02 0.221 0.113 0.94 Mono L1
ENSG00000075188 NUP37 390621 sc-eQTL 6.11e-01 -0.0801 0.157 0.94 NK L1
ENSG00000111666 CHPT1 813794 sc-eQTL 4.60e-01 -0.108 0.146 0.94 NK L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.55e-01 0.0474 0.106 0.94 NK L1
ENSG00000120860 WASHC3 448592 sc-eQTL 4.44e-01 0.0904 0.118 0.94 NK L1
ENSG00000136048 DRAM1 633161 sc-eQTL 1.76e-01 -0.227 0.167 0.94 NK L1
ENSG00000185480 PARPBP 390556 sc-eQTL 6.34e-01 0.0941 0.197 0.94 NK L1
ENSG00000017427 IGF1 28997 sc-eQTL 3.04e-01 -0.0611 0.0592 0.94 Other_T L1
ENSG00000075188 NUP37 390621 sc-eQTL 5.80e-01 0.0627 0.113 0.94 Other_T L1
ENSG00000111666 CHPT1 813794 sc-eQTL 4.46e-01 -0.126 0.165 0.94 Other_T L1
ENSG00000111670 GNPTAB 679782 sc-eQTL 1.03e-01 0.194 0.118 0.94 Other_T L1
ENSG00000120860 WASHC3 448592 sc-eQTL 9.52e-01 -0.00721 0.121 0.94 Other_T L1
ENSG00000136048 DRAM1 633161 sc-eQTL 8.55e-01 0.0264 0.145 0.94 Other_T L1
ENSG00000179088 C12orf42 -985269 sc-eQTL 4.07e-01 0.142 0.171 0.94 Other_T L1
ENSG00000185480 PARPBP 390556 sc-eQTL 1.78e-01 -0.162 0.12 0.94 Other_T L1
ENSG00000281344 HELLPAR 313156 sc-eQTL 4.79e-01 -0.0994 0.14 0.94 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 28997 sc-eQTL 6.55e-01 0.0171 0.0381 0.939 B_Activated L2
ENSG00000075188 NUP37 390621 sc-eQTL 2.99e-01 -0.206 0.197 0.939 B_Activated L2
ENSG00000111666 CHPT1 813794 sc-eQTL 7.08e-01 -0.0549 0.146 0.939 B_Activated L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 7.54e-01 -0.065 0.208 0.939 B_Activated L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.23e-01 -0.305 0.196 0.939 B_Activated L2
ENSG00000136048 DRAM1 633161 sc-eQTL 6.49e-01 0.0904 0.198 0.939 B_Activated L2
ENSG00000139351 SYCP3 771269 sc-eQTL 5.37e-01 -0.101 0.163 0.939 B_Activated L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 2.97e-01 -0.18 0.173 0.939 B_Activated L2
ENSG00000185480 PARPBP 390556 sc-eQTL 1.81e-01 -0.219 0.163 0.939 B_Activated L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 8.70e-01 -0.0253 0.154 0.939 B_Activated L2
ENSG00000017427 IGF1 28997 sc-eQTL 8.16e-01 0.0181 0.0777 0.94 B_Intermediate L2
ENSG00000075188 NUP37 390621 sc-eQTL 7.05e-01 0.0732 0.193 0.94 B_Intermediate L2
ENSG00000111666 CHPT1 813794 sc-eQTL 8.80e-01 0.0157 0.104 0.94 B_Intermediate L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 8.50e-01 0.0291 0.154 0.94 B_Intermediate L2
ENSG00000120860 WASHC3 448592 sc-eQTL 5.83e-01 0.0872 0.159 0.94 B_Intermediate L2
ENSG00000136048 DRAM1 633161 sc-eQTL 4.28e-01 0.135 0.17 0.94 B_Intermediate L2
ENSG00000139351 SYCP3 771269 sc-eQTL 6.23e-01 -0.0882 0.179 0.94 B_Intermediate L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 4.07e-03 0.487 0.168 0.94 B_Intermediate L2
ENSG00000185480 PARPBP 390556 sc-eQTL 8.43e-01 -0.0373 0.188 0.94 B_Intermediate L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 2.49e-01 0.208 0.18 0.94 B_Intermediate L2
ENSG00000017427 IGF1 28997 sc-eQTL 6.78e-01 0.0299 0.072 0.94 B_Memory L2
ENSG00000075188 NUP37 390621 sc-eQTL 5.87e-01 0.104 0.19 0.94 B_Memory L2
ENSG00000111666 CHPT1 813794 sc-eQTL 6.94e-01 0.0489 0.124 0.94 B_Memory L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 3.44e-01 -0.161 0.17 0.94 B_Memory L2
ENSG00000120860 WASHC3 448592 sc-eQTL 4.15e-01 -0.135 0.166 0.94 B_Memory L2
ENSG00000136048 DRAM1 633161 sc-eQTL 4.28e-01 0.138 0.174 0.94 B_Memory L2
ENSG00000139351 SYCP3 771269 sc-eQTL 5.18e-01 0.116 0.179 0.94 B_Memory L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 7.74e-01 0.0518 0.18 0.94 B_Memory L2
ENSG00000185480 PARPBP 390556 sc-eQTL 9.36e-01 -0.0146 0.183 0.94 B_Memory L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 8.97e-01 -0.0215 0.167 0.94 B_Memory L2
ENSG00000017427 IGF1 28997 sc-eQTL 8.69e-01 0.0165 0.0999 0.94 B_Naive1 L2
ENSG00000075188 NUP37 390621 sc-eQTL 2.38e-01 0.213 0.18 0.94 B_Naive1 L2
ENSG00000111666 CHPT1 813794 sc-eQTL 4.26e-01 -0.0749 0.0938 0.94 B_Naive1 L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 9.21e-01 0.0132 0.133 0.94 B_Naive1 L2
ENSG00000120860 WASHC3 448592 sc-eQTL 7.73e-01 0.0384 0.133 0.94 B_Naive1 L2
ENSG00000136048 DRAM1 633161 sc-eQTL 2.69e-01 0.16 0.144 0.94 B_Naive1 L2
ENSG00000139351 SYCP3 771269 sc-eQTL 3.84e-02 -0.405 0.194 0.94 B_Naive1 L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 9.26e-01 -0.0176 0.19 0.94 B_Naive1 L2
ENSG00000185480 PARPBP 390556 sc-eQTL 3.79e-01 0.168 0.191 0.94 B_Naive1 L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 1.31e-02 0.441 0.176 0.94 B_Naive1 L2
ENSG00000017427 IGF1 28997 sc-eQTL 2.76e-01 0.0947 0.0867 0.94 B_Naive2 L2
ENSG00000075188 NUP37 390621 sc-eQTL 5.53e-01 -0.106 0.178 0.94 B_Naive2 L2
ENSG00000111666 CHPT1 813794 sc-eQTL 3.76e-01 -0.0844 0.0953 0.94 B_Naive2 L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 8.82e-01 -0.022 0.148 0.94 B_Naive2 L2
ENSG00000120860 WASHC3 448592 sc-eQTL 8.95e-01 -0.0217 0.164 0.94 B_Naive2 L2
ENSG00000136048 DRAM1 633161 sc-eQTL 4.60e-01 -0.12 0.162 0.94 B_Naive2 L2
ENSG00000139351 SYCP3 771269 sc-eQTL 5.61e-02 0.326 0.169 0.94 B_Naive2 L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 4.27e-01 -0.146 0.184 0.94 B_Naive2 L2
ENSG00000185480 PARPBP 390556 sc-eQTL 5.48e-01 0.118 0.197 0.94 B_Naive2 L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 2.16e-01 -0.21 0.169 0.94 B_Naive2 L2
ENSG00000075188 NUP37 390621 sc-eQTL 6.50e-01 -0.0852 0.188 0.939 CD4_CTL L2
ENSG00000111666 CHPT1 813794 sc-eQTL 2.05e-01 0.238 0.187 0.939 CD4_CTL L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 1.67e-02 0.391 0.162 0.939 CD4_CTL L2
ENSG00000120860 WASHC3 448592 sc-eQTL 2.97e-01 0.191 0.183 0.939 CD4_CTL L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 7.47e-01 -0.055 0.171 0.939 CD4_CTL L2
ENSG00000075188 NUP37 390621 sc-eQTL 4.41e-01 -0.11 0.142 0.94 CD4_Naive L2
ENSG00000111666 CHPT1 813794 sc-eQTL 6.96e-01 -0.0643 0.164 0.94 CD4_Naive L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 9.11e-01 -0.0141 0.127 0.94 CD4_Naive L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.12e-02 0.263 0.103 0.94 CD4_Naive L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 5.75e-01 0.0943 0.168 0.94 CD4_Naive L2
ENSG00000075188 NUP37 390621 sc-eQTL 6.94e-01 -0.0596 0.151 0.94 CD4_TCM L2
ENSG00000111666 CHPT1 813794 sc-eQTL 3.34e-01 -0.169 0.174 0.94 CD4_TCM L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.84e-01 -0.0551 0.135 0.94 CD4_TCM L2
ENSG00000120860 WASHC3 448592 sc-eQTL 3.12e-01 0.105 0.104 0.94 CD4_TCM L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 8.94e-01 0.0234 0.176 0.94 CD4_TCM L2
ENSG00000075188 NUP37 390621 sc-eQTL 9.57e-02 -0.294 0.175 0.94 CD4_TEM L2
ENSG00000111666 CHPT1 813794 sc-eQTL 6.10e-01 -0.0868 0.17 0.94 CD4_TEM L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.41e-01 0.0764 0.164 0.94 CD4_TEM L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.83e-01 0.199 0.149 0.94 CD4_TEM L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 9.13e-01 0.0202 0.185 0.94 CD4_TEM L2
ENSG00000075188 NUP37 390621 sc-eQTL 4.08e-01 -0.135 0.162 0.94 CD8_CTL L2
ENSG00000111666 CHPT1 813794 sc-eQTL 7.20e-01 -0.0599 0.167 0.94 CD8_CTL L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 5.80e-01 -0.0739 0.133 0.94 CD8_CTL L2
ENSG00000120860 WASHC3 448592 sc-eQTL 8.54e-01 0.028 0.152 0.94 CD8_CTL L2
ENSG00000136048 DRAM1 633161 sc-eQTL 3.94e-01 -0.161 0.189 0.94 CD8_CTL L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 3.15e-01 0.184 0.182 0.94 CD8_CTL L2
ENSG00000075188 NUP37 390621 sc-eQTL 3.21e-01 -0.172 0.173 0.94 CD8_Naive L2
ENSG00000111666 CHPT1 813794 sc-eQTL 8.41e-01 -0.0347 0.172 0.94 CD8_Naive L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 4.71e-01 0.112 0.155 0.94 CD8_Naive L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.14e-02 0.219 0.117 0.94 CD8_Naive L2
ENSG00000136048 DRAM1 633161 sc-eQTL 2.27e-01 -0.219 0.181 0.94 CD8_Naive L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 5.04e-01 0.12 0.179 0.94 CD8_Naive L2
ENSG00000075188 NUP37 390621 sc-eQTL 1.04e-02 -0.467 0.181 0.938 CD8_TCM L2
ENSG00000111666 CHPT1 813794 sc-eQTL 4.62e-01 -0.121 0.164 0.938 CD8_TCM L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 4.94e-01 0.117 0.17 0.938 CD8_TCM L2
ENSG00000120860 WASHC3 448592 sc-eQTL 8.62e-01 0.0284 0.163 0.938 CD8_TCM L2
ENSG00000136048 DRAM1 633161 sc-eQTL 3.79e-01 0.157 0.178 0.938 CD8_TCM L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 3.38e-02 -0.37 0.173 0.938 CD8_TCM L2
ENSG00000075188 NUP37 390621 sc-eQTL 7.09e-01 -0.0708 0.189 0.936 CD8_TEM L2
ENSG00000111666 CHPT1 813794 sc-eQTL 9.38e-01 0.0139 0.179 0.936 CD8_TEM L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 9.43e-01 -0.0138 0.192 0.936 CD8_TEM L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.34e-01 0.257 0.171 0.936 CD8_TEM L2
ENSG00000136048 DRAM1 633161 sc-eQTL 3.39e-01 0.181 0.189 0.936 CD8_TEM L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 7.13e-01 -0.0697 0.189 0.936 CD8_TEM L2
ENSG00000017427 IGF1 28997 sc-eQTL 3.48e-01 -0.0599 0.0636 0.939 MAIT L2
ENSG00000075188 NUP37 390621 sc-eQTL 5.80e-01 -0.0989 0.179 0.939 MAIT L2
ENSG00000111666 CHPT1 813794 sc-eQTL 8.77e-01 0.0269 0.174 0.939 MAIT L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 4.14e-01 0.126 0.154 0.939 MAIT L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.75e-01 -0.066 0.157 0.939 MAIT L2
ENSG00000136048 DRAM1 633161 sc-eQTL 7.74e-01 0.0512 0.178 0.939 MAIT L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 7.01e-01 0.0642 0.167 0.939 MAIT L2
ENSG00000185480 PARPBP 390556 sc-eQTL 8.88e-02 -0.296 0.173 0.939 MAIT L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 3.19e-01 0.154 0.154 0.939 MAIT L2
ENSG00000075188 NUP37 390621 sc-eQTL 3.91e-01 -0.168 0.196 0.938 NK_CD56bright L2
ENSG00000111666 CHPT1 813794 sc-eQTL 5.70e-01 -0.0809 0.142 0.938 NK_CD56bright L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 9.57e-01 -0.00887 0.164 0.938 NK_CD56bright L2
ENSG00000120860 WASHC3 448592 sc-eQTL 4.30e-01 -0.134 0.169 0.938 NK_CD56bright L2
ENSG00000136048 DRAM1 633161 sc-eQTL 7.29e-01 0.0619 0.178 0.938 NK_CD56bright L2
ENSG00000185480 PARPBP 390556 sc-eQTL 9.04e-01 -0.0226 0.188 0.938 NK_CD56bright L2
ENSG00000075188 NUP37 390621 sc-eQTL 8.66e-01 -0.0294 0.174 0.94 NK_CD56dim L2
ENSG00000111666 CHPT1 813794 sc-eQTL 5.11e-01 -0.112 0.17 0.94 NK_CD56dim L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 2.55e-01 0.146 0.128 0.94 NK_CD56dim L2
ENSG00000120860 WASHC3 448592 sc-eQTL 5.50e-01 0.0885 0.148 0.94 NK_CD56dim L2
ENSG00000136048 DRAM1 633161 sc-eQTL 1.33e-01 -0.269 0.179 0.94 NK_CD56dim L2
ENSG00000185480 PARPBP 390556 sc-eQTL 3.63e-01 0.184 0.202 0.94 NK_CD56dim L2
ENSG00000075188 NUP37 390621 sc-eQTL 6.77e-01 0.0733 0.176 0.936 NK_HLA L2
ENSG00000111666 CHPT1 813794 sc-eQTL 9.59e-01 0.00937 0.18 0.936 NK_HLA L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 4.14e-01 0.118 0.145 0.936 NK_HLA L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.74e-01 -0.0756 0.18 0.936 NK_HLA L2
ENSG00000136048 DRAM1 633161 sc-eQTL 5.19e-01 -0.119 0.184 0.936 NK_HLA L2
ENSG00000185480 PARPBP 390556 sc-eQTL 3.08e-01 0.185 0.181 0.936 NK_HLA L2
ENSG00000075188 NUP37 390621 sc-eQTL 5.59e-01 -0.102 0.174 0.94 NK_cytokine L2
ENSG00000111666 CHPT1 813794 sc-eQTL 7.94e-01 -0.0428 0.163 0.94 NK_cytokine L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 8.52e-01 0.0232 0.124 0.94 NK_cytokine L2
ENSG00000120860 WASHC3 448592 sc-eQTL 4.16e-01 0.112 0.137 0.94 NK_cytokine L2
ENSG00000136048 DRAM1 633161 sc-eQTL 3.11e-01 -0.181 0.178 0.94 NK_cytokine L2
ENSG00000185480 PARPBP 390556 sc-eQTL 2.23e-01 -0.235 0.192 0.94 NK_cytokine L2
ENSG00000017427 IGF1 28997 sc-eQTL 9.93e-01 -0.00138 0.147 0.944 PB L2
ENSG00000075188 NUP37 390621 sc-eQTL 2.37e-01 0.234 0.197 0.944 PB L2
ENSG00000111666 CHPT1 813794 sc-eQTL 6.09e-01 -0.0786 0.153 0.944 PB L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 5.51e-02 0.421 0.217 0.944 PB L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.17e-01 0.0899 0.18 0.944 PB L2
ENSG00000136048 DRAM1 633161 sc-eQTL 3.35e-01 -0.176 0.182 0.944 PB L2
ENSG00000139351 SYCP3 771269 sc-eQTL 2.01e-01 -0.27 0.21 0.944 PB L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 3.42e-01 -0.18 0.188 0.944 PB L2
ENSG00000185480 PARPBP 390556 sc-eQTL 8.92e-01 -0.0265 0.194 0.944 PB L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 5.58e-01 0.105 0.179 0.944 PB L2
ENSG00000017427 IGF1 28997 sc-eQTL 3.09e-01 0.0678 0.0665 0.941 Pro_T L2
ENSG00000075188 NUP37 390621 sc-eQTL 6.95e-01 0.0528 0.134 0.941 Pro_T L2
ENSG00000111666 CHPT1 813794 sc-eQTL 7.61e-01 -0.0542 0.178 0.941 Pro_T L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 5.83e-02 0.249 0.131 0.941 Pro_T L2
ENSG00000120860 WASHC3 448592 sc-eQTL 8.27e-01 0.0339 0.155 0.941 Pro_T L2
ENSG00000136048 DRAM1 633161 sc-eQTL 2.18e-01 -0.164 0.132 0.941 Pro_T L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 5.84e-01 -0.0937 0.171 0.941 Pro_T L2
ENSG00000185480 PARPBP 390556 sc-eQTL 3.60e-01 -0.113 0.123 0.941 Pro_T L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 5.55e-01 -0.0796 0.134 0.941 Pro_T L2
ENSG00000075188 NUP37 390621 sc-eQTL 6.97e-01 -0.0709 0.182 0.94 Treg L2
ENSG00000111666 CHPT1 813794 sc-eQTL 3.74e-01 -0.168 0.189 0.94 Treg L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 8.83e-01 -0.0244 0.165 0.94 Treg L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.74e-02 0.276 0.15 0.94 Treg L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 1.25e-01 0.235 0.153 0.94 Treg L2
ENSG00000075188 NUP37 390621 sc-eQTL 9.36e-01 -0.0136 0.17 0.937 cDC L2
ENSG00000111666 CHPT1 813794 sc-eQTL 9.53e-01 0.00966 0.165 0.937 cDC L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 1.97e-01 0.275 0.212 0.937 cDC L2
ENSG00000120860 WASHC3 448592 sc-eQTL 4.49e-01 -0.143 0.188 0.937 cDC L2
ENSG00000136048 DRAM1 633161 sc-eQTL 8.53e-01 0.0272 0.147 0.937 cDC L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 2.74e-01 0.144 0.131 0.937 cDC L2
ENSG00000185480 PARPBP 390556 sc-eQTL 6.66e-01 0.0723 0.167 0.937 cDC L2
ENSG00000075188 NUP37 390621 sc-eQTL 4.46e-01 0.127 0.167 0.94 cMono_IL1B L2
ENSG00000111666 CHPT1 813794 sc-eQTL 4.86e-01 -0.0876 0.126 0.94 cMono_IL1B L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 1.35e-01 0.249 0.166 0.94 cMono_IL1B L2
ENSG00000120860 WASHC3 448592 sc-eQTL 7.54e-01 0.0455 0.145 0.94 cMono_IL1B L2
ENSG00000136048 DRAM1 633161 sc-eQTL 2.03e-01 0.157 0.123 0.94 cMono_IL1B L2
ENSG00000075188 NUP37 390621 sc-eQTL 2.85e-01 -0.193 0.18 0.94 cMono_S100A L2
ENSG00000111666 CHPT1 813794 sc-eQTL 4.94e-01 0.0947 0.138 0.94 cMono_S100A L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 3.15e-01 -0.169 0.168 0.94 cMono_S100A L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.45e-02 0.417 0.169 0.94 cMono_S100A L2
ENSG00000136048 DRAM1 633161 sc-eQTL 1.85e-01 0.177 0.133 0.94 cMono_S100A L2
ENSG00000075188 NUP37 390621 sc-eQTL 1.39e-01 -0.31 0.209 0.927 gdT L2
ENSG00000111666 CHPT1 813794 sc-eQTL 1.31e-01 -0.298 0.196 0.927 gdT L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 8.93e-02 0.252 0.147 0.927 gdT L2
ENSG00000120860 WASHC3 448592 sc-eQTL 6.75e-01 0.0808 0.192 0.927 gdT L2
ENSG00000136048 DRAM1 633161 sc-eQTL 5.80e-01 0.108 0.195 0.927 gdT L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 4.85e-01 0.134 0.192 0.927 gdT L2
ENSG00000185480 PARPBP 390556 sc-eQTL 1.02e-01 0.313 0.19 0.927 gdT L2
ENSG00000281344 HELLPAR 313156 sc-eQTL 6.09e-01 -0.0899 0.175 0.927 gdT L2
ENSG00000075188 NUP37 390621 sc-eQTL 8.84e-01 0.0272 0.186 0.938 intMono L2
ENSG00000111666 CHPT1 813794 sc-eQTL 5.96e-01 -0.0905 0.17 0.938 intMono L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 7.09e-01 0.0749 0.2 0.938 intMono L2
ENSG00000120860 WASHC3 448592 sc-eQTL 8.54e-01 -0.0345 0.188 0.938 intMono L2
ENSG00000136048 DRAM1 633161 sc-eQTL 9.82e-01 0.00363 0.164 0.938 intMono L2
ENSG00000075188 NUP37 390621 sc-eQTL 7.17e-01 -0.0679 0.187 0.943 ncMono L2
ENSG00000111666 CHPT1 813794 sc-eQTL 6.68e-01 -0.074 0.172 0.943 ncMono L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 7.52e-01 0.0654 0.206 0.943 ncMono L2
ENSG00000120860 WASHC3 448592 sc-eQTL 1.61e-01 0.234 0.166 0.943 ncMono L2
ENSG00000136048 DRAM1 633161 sc-eQTL 7.23e-01 -0.0551 0.155 0.943 ncMono L2
ENSG00000075188 NUP37 390621 sc-eQTL 1.38e-01 0.343 0.23 0.944 pDC L2
ENSG00000111666 CHPT1 813794 sc-eQTL 2.96e-01 -0.211 0.201 0.944 pDC L2
ENSG00000111670 GNPTAB 679782 sc-eQTL 5.49e-01 -0.128 0.213 0.944 pDC L2
ENSG00000120860 WASHC3 448592 sc-eQTL 9.37e-01 0.0155 0.195 0.944 pDC L2
ENSG00000136048 DRAM1 633161 sc-eQTL 1.33e-01 -0.226 0.15 0.944 pDC L2
ENSG00000179088 C12orf42 -985269 sc-eQTL 5.35e-01 0.125 0.2 0.944 pDC L2
ENSG00000185480 PARPBP 390556 sc-eQTL 9.12e-01 0.0221 0.2 0.944 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 28997 sc-eQTL 7.19e-01 0.0326 0.0904 0.94 B_Memory LOneK1K
ENSG00000075188 NUP37 390621 sc-eQTL 5.18e-01 0.118 0.182 0.94 B_Memory LOneK1K
ENSG00000111666 CHPT1 813794 sc-eQTL 4.54e-01 0.0717 0.0955 0.94 B_Memory LOneK1K
ENSG00000111670 GNPTAB 679782 sc-eQTL 7.39e-01 -0.05 0.15 0.94 B_Memory LOneK1K
ENSG00000120860 WASHC3 448592 sc-eQTL 7.77e-01 -0.037 0.131 0.94 B_Memory LOneK1K
ENSG00000136048 DRAM1 633161 sc-eQTL 2.10e-01 0.196 0.156 0.94 B_Memory LOneK1K
ENSG00000139351 SYCP3 771269 sc-eQTL 9.62e-01 0.00851 0.18 0.94 B_Memory LOneK1K
ENSG00000179088 C12orf42 -985269 sc-eQTL 3.27e-02 0.3 0.14 0.94 B_Memory LOneK1K
ENSG00000185480 PARPBP 390556 sc-eQTL 5.13e-01 -0.124 0.189 0.94 B_Memory LOneK1K
ENSG00000281344 HELLPAR 313156 sc-eQTL 4.91e-01 0.129 0.187 0.94 B_Memory LOneK1K
ENSG00000017427 IGF1 28997 sc-eQTL 7.46e-01 0.0341 0.105 0.94 B_Naive LOneK1K
ENSG00000075188 NUP37 390621 sc-eQTL 2.13e-01 0.215 0.172 0.94 B_Naive LOneK1K
ENSG00000111666 CHPT1 813794 sc-eQTL 6.71e-01 -0.0362 0.085 0.94 B_Naive LOneK1K
ENSG00000111670 GNPTAB 679782 sc-eQTL 4.51e-01 -0.0918 0.122 0.94 B_Naive LOneK1K
ENSG00000120860 WASHC3 448592 sc-eQTL 9.62e-01 -0.00616 0.127 0.94 B_Naive LOneK1K
ENSG00000136048 DRAM1 633161 sc-eQTL 7.44e-01 0.0437 0.134 0.94 B_Naive LOneK1K
ENSG00000139351 SYCP3 771269 sc-eQTL 2.88e-01 -0.205 0.192 0.94 B_Naive LOneK1K
ENSG00000179088 C12orf42 -985269 sc-eQTL 6.55e-01 -0.082 0.183 0.94 B_Naive LOneK1K
ENSG00000185480 PARPBP 390556 sc-eQTL 6.29e-01 0.095 0.196 0.94 B_Naive LOneK1K
ENSG00000281344 HELLPAR 313156 sc-eQTL 4.35e-01 0.14 0.178 0.94 B_Naive LOneK1K
ENSG00000075188 NUP37 390621 sc-eQTL 9.26e-01 -0.0144 0.154 0.94 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 813794 sc-eQTL 7.84e-01 -0.0342 0.124 0.94 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.37e-01 0.0756 0.16 0.94 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 448592 sc-eQTL 1.76e-01 0.191 0.14 0.94 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 633161 sc-eQTL 2.72e-02 0.254 0.114 0.94 CD14_Mono LOneK1K
ENSG00000075188 NUP37 390621 sc-eQTL 4.36e-01 -0.138 0.177 0.94 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 813794 sc-eQTL 9.29e-01 0.0138 0.155 0.94 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.19e-02 0.349 0.186 0.94 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 448592 sc-eQTL 2.86e-01 0.166 0.155 0.94 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 633161 sc-eQTL 6.52e-01 0.0605 0.134 0.94 CD16_Mono LOneK1K
ENSG00000075188 NUP37 390621 sc-eQTL 7.44e-01 -0.0543 0.166 0.94 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 813794 sc-eQTL 4.86e-01 -0.113 0.162 0.94 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 679782 sc-eQTL 6.12e-01 0.0564 0.111 0.94 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 448592 sc-eQTL 4.58e-01 0.095 0.128 0.94 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 633161 sc-eQTL 1.34e-01 -0.258 0.171 0.94 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 390556 sc-eQTL 8.62e-01 0.0352 0.202 0.94 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111670 GNPTAB 679782 eQTL 4.43e-03 0.0814 0.0285 0.00151 0.0 0.0594
ENSG00000120860 WASHC3 448592 eQTL 0.0149 0.0624 0.0256 0.0 0.0 0.0594
ENSG00000183395 PMCH 312908 pQTL 0.00391 -0.178 0.0614 0.003 0.00158 0.0582

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111670 GNPTAB 679782 2.76e-07 1.35e-07 6.57e-08 2.31e-07 1.01e-07 9.05e-08 1.49e-07 5.19e-08 1.45e-07 5.42e-08 1.54e-07 8.55e-08 1.47e-07 8.13e-08 5.97e-08 7.5e-08 3.87e-08 1.4e-07 7.53e-08 4.16e-08 1.25e-07 1.24e-07 1.44e-07 2.91e-08 1.63e-07 1.14e-07 1.1e-07 1.06e-07 1.08e-07 1.05e-07 9.7e-08 4.22e-08 3.66e-08 8.56e-08 5.64e-08 3.05e-08 4.41e-08 9.03e-08 6.63e-08 3.6e-08 4.68e-08 1.46e-07 3.35e-08 1.53e-08 3.84e-08 1.87e-08 1.19e-07 1.88e-09 4.83e-08
ENSG00000120860 WASHC3 448592 7.76e-07 5.6e-07 3.08e-07 3.16e-07 9.72e-08 2.12e-07 4.09e-07 6.72e-08 2.75e-07 1.78e-07 4.3e-07 2.11e-07 5.39e-07 1.58e-07 3.16e-07 2.08e-07 1.35e-07 3.67e-07 3.71e-07 8.86e-08 2.3e-07 3.34e-07 2.77e-07 1.34e-07 7.42e-07 2.2e-07 2.43e-07 2.59e-07 2.03e-07 7.71e-07 1.95e-07 5.01e-08 5.75e-08 1.16e-07 2.7e-07 2.42e-07 1.42e-07 1.08e-07 4.11e-08 2.2e-08 6e-08 4.35e-07 6.68e-08 9e-08 9.15e-08 1.91e-08 8.94e-08 3.04e-09 6.06e-08