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Genes within 1Mb (chr12:102509145:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 27401 sc-eQTL 6.39e-01 0.0373 0.0794 0.94 B L1
ENSG00000075188 NUP37 389025 sc-eQTL 3.47e-01 0.13 0.138 0.94 B L1
ENSG00000111666 CHPT1 812198 sc-eQTL 9.00e-01 -0.0105 0.084 0.94 B L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 3.76e-01 -0.108 0.121 0.94 B L1
ENSG00000120860 WASHC3 446996 sc-eQTL 5.67e-01 -0.0545 0.095 0.94 B L1
ENSG00000136048 DRAM1 631565 sc-eQTL 7.01e-01 -0.0415 0.108 0.94 B L1
ENSG00000139351 SYCP3 769673 sc-eQTL 5.73e-01 -0.0967 0.171 0.94 B L1
ENSG00000179088 C12orf42 -986865 sc-eQTL 9.50e-01 -0.00928 0.146 0.94 B L1
ENSG00000185480 PARPBP 388960 sc-eQTL 8.97e-01 0.0213 0.164 0.94 B L1
ENSG00000281344 HELLPAR 311560 sc-eQTL 4.92e-01 0.105 0.153 0.94 B L1
ENSG00000075188 NUP37 389025 sc-eQTL 1.18e-01 -0.194 0.123 0.94 CD4T L1
ENSG00000111666 CHPT1 812198 sc-eQTL 6.01e-01 -0.0877 0.167 0.94 CD4T L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 9.18e-01 0.012 0.116 0.94 CD4T L1
ENSG00000120860 WASHC3 446996 sc-eQTL 1.54e-02 0.212 0.0867 0.94 CD4T L1
ENSG00000179088 C12orf42 -986865 sc-eQTL 2.94e-01 0.17 0.162 0.94 CD4T L1
ENSG00000075188 NUP37 389025 sc-eQTL 1.17e-01 -0.24 0.153 0.94 CD8T L1
ENSG00000111666 CHPT1 812198 sc-eQTL 9.51e-01 -0.0102 0.166 0.94 CD8T L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 7.69e-01 0.0321 0.109 0.94 CD8T L1
ENSG00000120860 WASHC3 446996 sc-eQTL 4.72e-02 0.214 0.107 0.94 CD8T L1
ENSG00000136048 DRAM1 631565 sc-eQTL 5.18e-01 -0.1 0.155 0.94 CD8T L1
ENSG00000179088 C12orf42 -986865 sc-eQTL 9.14e-01 0.0189 0.176 0.94 CD8T L1
ENSG00000075188 NUP37 389025 sc-eQTL 6.34e-02 0.325 0.174 0.939 DC L1
ENSG00000111666 CHPT1 812198 sc-eQTL 6.96e-01 -0.0629 0.16 0.939 DC L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 5.45e-01 0.107 0.176 0.939 DC L1
ENSG00000120860 WASHC3 446996 sc-eQTL 3.77e-01 -0.149 0.168 0.939 DC L1
ENSG00000136048 DRAM1 631565 sc-eQTL 1.95e-01 0.18 0.139 0.939 DC L1
ENSG00000179088 C12orf42 -986865 sc-eQTL 8.27e-01 0.0345 0.157 0.939 DC L1
ENSG00000185480 PARPBP 388960 sc-eQTL 4.85e-01 0.128 0.183 0.939 DC L1
ENSG00000075188 NUP37 389025 sc-eQTL 9.37e-01 -0.0115 0.146 0.94 Mono L1
ENSG00000111666 CHPT1 812198 sc-eQTL 8.48e-01 -0.0236 0.124 0.94 Mono L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 3.56e-01 0.143 0.155 0.94 Mono L1
ENSG00000120860 WASHC3 446996 sc-eQTL 1.33e-01 0.21 0.139 0.94 Mono L1
ENSG00000136048 DRAM1 631565 sc-eQTL 5.16e-02 0.221 0.113 0.94 Mono L1
ENSG00000075188 NUP37 389025 sc-eQTL 6.11e-01 -0.0801 0.157 0.94 NK L1
ENSG00000111666 CHPT1 812198 sc-eQTL 4.60e-01 -0.108 0.146 0.94 NK L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.55e-01 0.0474 0.106 0.94 NK L1
ENSG00000120860 WASHC3 446996 sc-eQTL 4.44e-01 0.0904 0.118 0.94 NK L1
ENSG00000136048 DRAM1 631565 sc-eQTL 1.76e-01 -0.227 0.167 0.94 NK L1
ENSG00000185480 PARPBP 388960 sc-eQTL 6.34e-01 0.0941 0.197 0.94 NK L1
ENSG00000017427 IGF1 27401 sc-eQTL 3.04e-01 -0.0611 0.0592 0.94 Other_T L1
ENSG00000075188 NUP37 389025 sc-eQTL 5.80e-01 0.0627 0.113 0.94 Other_T L1
ENSG00000111666 CHPT1 812198 sc-eQTL 4.46e-01 -0.126 0.165 0.94 Other_T L1
ENSG00000111670 GNPTAB 678186 sc-eQTL 1.03e-01 0.194 0.118 0.94 Other_T L1
ENSG00000120860 WASHC3 446996 sc-eQTL 9.52e-01 -0.00721 0.121 0.94 Other_T L1
ENSG00000136048 DRAM1 631565 sc-eQTL 8.55e-01 0.0264 0.145 0.94 Other_T L1
ENSG00000179088 C12orf42 -986865 sc-eQTL 4.07e-01 0.142 0.171 0.94 Other_T L1
ENSG00000185480 PARPBP 388960 sc-eQTL 1.78e-01 -0.162 0.12 0.94 Other_T L1
ENSG00000281344 HELLPAR 311560 sc-eQTL 4.79e-01 -0.0994 0.14 0.94 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 27401 sc-eQTL 6.55e-01 0.0171 0.0381 0.939 B_Activated L2
ENSG00000075188 NUP37 389025 sc-eQTL 2.99e-01 -0.206 0.197 0.939 B_Activated L2
ENSG00000111666 CHPT1 812198 sc-eQTL 7.08e-01 -0.0549 0.146 0.939 B_Activated L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 7.54e-01 -0.065 0.208 0.939 B_Activated L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.23e-01 -0.305 0.196 0.939 B_Activated L2
ENSG00000136048 DRAM1 631565 sc-eQTL 6.49e-01 0.0904 0.198 0.939 B_Activated L2
ENSG00000139351 SYCP3 769673 sc-eQTL 5.37e-01 -0.101 0.163 0.939 B_Activated L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 2.97e-01 -0.18 0.173 0.939 B_Activated L2
ENSG00000185480 PARPBP 388960 sc-eQTL 1.81e-01 -0.219 0.163 0.939 B_Activated L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 8.70e-01 -0.0253 0.154 0.939 B_Activated L2
ENSG00000017427 IGF1 27401 sc-eQTL 8.16e-01 0.0181 0.0777 0.94 B_Intermediate L2
ENSG00000075188 NUP37 389025 sc-eQTL 7.05e-01 0.0732 0.193 0.94 B_Intermediate L2
ENSG00000111666 CHPT1 812198 sc-eQTL 8.80e-01 0.0157 0.104 0.94 B_Intermediate L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 8.50e-01 0.0291 0.154 0.94 B_Intermediate L2
ENSG00000120860 WASHC3 446996 sc-eQTL 5.83e-01 0.0872 0.159 0.94 B_Intermediate L2
ENSG00000136048 DRAM1 631565 sc-eQTL 4.28e-01 0.135 0.17 0.94 B_Intermediate L2
ENSG00000139351 SYCP3 769673 sc-eQTL 6.23e-01 -0.0882 0.179 0.94 B_Intermediate L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 4.07e-03 0.487 0.168 0.94 B_Intermediate L2
ENSG00000185480 PARPBP 388960 sc-eQTL 8.43e-01 -0.0373 0.188 0.94 B_Intermediate L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 2.49e-01 0.208 0.18 0.94 B_Intermediate L2
ENSG00000017427 IGF1 27401 sc-eQTL 6.78e-01 0.0299 0.072 0.94 B_Memory L2
ENSG00000075188 NUP37 389025 sc-eQTL 5.87e-01 0.104 0.19 0.94 B_Memory L2
ENSG00000111666 CHPT1 812198 sc-eQTL 6.94e-01 0.0489 0.124 0.94 B_Memory L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 3.44e-01 -0.161 0.17 0.94 B_Memory L2
ENSG00000120860 WASHC3 446996 sc-eQTL 4.15e-01 -0.135 0.166 0.94 B_Memory L2
ENSG00000136048 DRAM1 631565 sc-eQTL 4.28e-01 0.138 0.174 0.94 B_Memory L2
ENSG00000139351 SYCP3 769673 sc-eQTL 5.18e-01 0.116 0.179 0.94 B_Memory L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 7.74e-01 0.0518 0.18 0.94 B_Memory L2
ENSG00000185480 PARPBP 388960 sc-eQTL 9.36e-01 -0.0146 0.183 0.94 B_Memory L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 8.97e-01 -0.0215 0.167 0.94 B_Memory L2
ENSG00000017427 IGF1 27401 sc-eQTL 8.69e-01 0.0165 0.0999 0.94 B_Naive1 L2
ENSG00000075188 NUP37 389025 sc-eQTL 2.38e-01 0.213 0.18 0.94 B_Naive1 L2
ENSG00000111666 CHPT1 812198 sc-eQTL 4.26e-01 -0.0749 0.0938 0.94 B_Naive1 L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 9.21e-01 0.0132 0.133 0.94 B_Naive1 L2
ENSG00000120860 WASHC3 446996 sc-eQTL 7.73e-01 0.0384 0.133 0.94 B_Naive1 L2
ENSG00000136048 DRAM1 631565 sc-eQTL 2.69e-01 0.16 0.144 0.94 B_Naive1 L2
ENSG00000139351 SYCP3 769673 sc-eQTL 3.84e-02 -0.405 0.194 0.94 B_Naive1 L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 9.26e-01 -0.0176 0.19 0.94 B_Naive1 L2
ENSG00000185480 PARPBP 388960 sc-eQTL 3.79e-01 0.168 0.191 0.94 B_Naive1 L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 1.31e-02 0.441 0.176 0.94 B_Naive1 L2
ENSG00000017427 IGF1 27401 sc-eQTL 2.76e-01 0.0947 0.0867 0.94 B_Naive2 L2
ENSG00000075188 NUP37 389025 sc-eQTL 5.53e-01 -0.106 0.178 0.94 B_Naive2 L2
ENSG00000111666 CHPT1 812198 sc-eQTL 3.76e-01 -0.0844 0.0953 0.94 B_Naive2 L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 8.82e-01 -0.022 0.148 0.94 B_Naive2 L2
ENSG00000120860 WASHC3 446996 sc-eQTL 8.95e-01 -0.0217 0.164 0.94 B_Naive2 L2
ENSG00000136048 DRAM1 631565 sc-eQTL 4.60e-01 -0.12 0.162 0.94 B_Naive2 L2
ENSG00000139351 SYCP3 769673 sc-eQTL 5.61e-02 0.326 0.169 0.94 B_Naive2 L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 4.27e-01 -0.146 0.184 0.94 B_Naive2 L2
ENSG00000185480 PARPBP 388960 sc-eQTL 5.48e-01 0.118 0.197 0.94 B_Naive2 L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 2.16e-01 -0.21 0.169 0.94 B_Naive2 L2
ENSG00000075188 NUP37 389025 sc-eQTL 6.50e-01 -0.0852 0.188 0.939 CD4_CTL L2
ENSG00000111666 CHPT1 812198 sc-eQTL 2.05e-01 0.238 0.187 0.939 CD4_CTL L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 1.67e-02 0.391 0.162 0.939 CD4_CTL L2
ENSG00000120860 WASHC3 446996 sc-eQTL 2.97e-01 0.191 0.183 0.939 CD4_CTL L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 7.47e-01 -0.055 0.171 0.939 CD4_CTL L2
ENSG00000075188 NUP37 389025 sc-eQTL 4.41e-01 -0.11 0.142 0.94 CD4_Naive L2
ENSG00000111666 CHPT1 812198 sc-eQTL 6.96e-01 -0.0643 0.164 0.94 CD4_Naive L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 9.11e-01 -0.0141 0.127 0.94 CD4_Naive L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.12e-02 0.263 0.103 0.94 CD4_Naive L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 5.75e-01 0.0943 0.168 0.94 CD4_Naive L2
ENSG00000075188 NUP37 389025 sc-eQTL 6.94e-01 -0.0596 0.151 0.94 CD4_TCM L2
ENSG00000111666 CHPT1 812198 sc-eQTL 3.34e-01 -0.169 0.174 0.94 CD4_TCM L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.84e-01 -0.0551 0.135 0.94 CD4_TCM L2
ENSG00000120860 WASHC3 446996 sc-eQTL 3.12e-01 0.105 0.104 0.94 CD4_TCM L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 8.94e-01 0.0234 0.176 0.94 CD4_TCM L2
ENSG00000075188 NUP37 389025 sc-eQTL 9.57e-02 -0.294 0.175 0.94 CD4_TEM L2
ENSG00000111666 CHPT1 812198 sc-eQTL 6.10e-01 -0.0868 0.17 0.94 CD4_TEM L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.41e-01 0.0764 0.164 0.94 CD4_TEM L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.83e-01 0.199 0.149 0.94 CD4_TEM L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 9.13e-01 0.0202 0.185 0.94 CD4_TEM L2
ENSG00000075188 NUP37 389025 sc-eQTL 4.08e-01 -0.135 0.162 0.94 CD8_CTL L2
ENSG00000111666 CHPT1 812198 sc-eQTL 7.20e-01 -0.0599 0.167 0.94 CD8_CTL L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 5.80e-01 -0.0739 0.133 0.94 CD8_CTL L2
ENSG00000120860 WASHC3 446996 sc-eQTL 8.54e-01 0.028 0.152 0.94 CD8_CTL L2
ENSG00000136048 DRAM1 631565 sc-eQTL 3.94e-01 -0.161 0.189 0.94 CD8_CTL L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 3.15e-01 0.184 0.182 0.94 CD8_CTL L2
ENSG00000075188 NUP37 389025 sc-eQTL 3.21e-01 -0.172 0.173 0.94 CD8_Naive L2
ENSG00000111666 CHPT1 812198 sc-eQTL 8.41e-01 -0.0347 0.172 0.94 CD8_Naive L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 4.71e-01 0.112 0.155 0.94 CD8_Naive L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.14e-02 0.219 0.117 0.94 CD8_Naive L2
ENSG00000136048 DRAM1 631565 sc-eQTL 2.27e-01 -0.219 0.181 0.94 CD8_Naive L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 5.04e-01 0.12 0.179 0.94 CD8_Naive L2
ENSG00000075188 NUP37 389025 sc-eQTL 1.04e-02 -0.467 0.181 0.938 CD8_TCM L2
ENSG00000111666 CHPT1 812198 sc-eQTL 4.62e-01 -0.121 0.164 0.938 CD8_TCM L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 4.94e-01 0.117 0.17 0.938 CD8_TCM L2
ENSG00000120860 WASHC3 446996 sc-eQTL 8.62e-01 0.0284 0.163 0.938 CD8_TCM L2
ENSG00000136048 DRAM1 631565 sc-eQTL 3.79e-01 0.157 0.178 0.938 CD8_TCM L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 3.38e-02 -0.37 0.173 0.938 CD8_TCM L2
ENSG00000075188 NUP37 389025 sc-eQTL 7.09e-01 -0.0708 0.189 0.936 CD8_TEM L2
ENSG00000111666 CHPT1 812198 sc-eQTL 9.38e-01 0.0139 0.179 0.936 CD8_TEM L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 9.43e-01 -0.0138 0.192 0.936 CD8_TEM L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.34e-01 0.257 0.171 0.936 CD8_TEM L2
ENSG00000136048 DRAM1 631565 sc-eQTL 3.39e-01 0.181 0.189 0.936 CD8_TEM L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 7.13e-01 -0.0697 0.189 0.936 CD8_TEM L2
ENSG00000017427 IGF1 27401 sc-eQTL 3.48e-01 -0.0599 0.0636 0.939 MAIT L2
ENSG00000075188 NUP37 389025 sc-eQTL 5.80e-01 -0.0989 0.179 0.939 MAIT L2
ENSG00000111666 CHPT1 812198 sc-eQTL 8.77e-01 0.0269 0.174 0.939 MAIT L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 4.14e-01 0.126 0.154 0.939 MAIT L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.75e-01 -0.066 0.157 0.939 MAIT L2
ENSG00000136048 DRAM1 631565 sc-eQTL 7.74e-01 0.0512 0.178 0.939 MAIT L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 7.01e-01 0.0642 0.167 0.939 MAIT L2
ENSG00000185480 PARPBP 388960 sc-eQTL 8.88e-02 -0.296 0.173 0.939 MAIT L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 3.19e-01 0.154 0.154 0.939 MAIT L2
ENSG00000075188 NUP37 389025 sc-eQTL 3.91e-01 -0.168 0.196 0.938 NK_CD56bright L2
ENSG00000111666 CHPT1 812198 sc-eQTL 5.70e-01 -0.0809 0.142 0.938 NK_CD56bright L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 9.57e-01 -0.00887 0.164 0.938 NK_CD56bright L2
ENSG00000120860 WASHC3 446996 sc-eQTL 4.30e-01 -0.134 0.169 0.938 NK_CD56bright L2
ENSG00000136048 DRAM1 631565 sc-eQTL 7.29e-01 0.0619 0.178 0.938 NK_CD56bright L2
ENSG00000185480 PARPBP 388960 sc-eQTL 9.04e-01 -0.0226 0.188 0.938 NK_CD56bright L2
ENSG00000075188 NUP37 389025 sc-eQTL 8.66e-01 -0.0294 0.174 0.94 NK_CD56dim L2
ENSG00000111666 CHPT1 812198 sc-eQTL 5.11e-01 -0.112 0.17 0.94 NK_CD56dim L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 2.55e-01 0.146 0.128 0.94 NK_CD56dim L2
ENSG00000120860 WASHC3 446996 sc-eQTL 5.50e-01 0.0885 0.148 0.94 NK_CD56dim L2
ENSG00000136048 DRAM1 631565 sc-eQTL 1.33e-01 -0.269 0.179 0.94 NK_CD56dim L2
ENSG00000185480 PARPBP 388960 sc-eQTL 3.63e-01 0.184 0.202 0.94 NK_CD56dim L2
ENSG00000075188 NUP37 389025 sc-eQTL 6.77e-01 0.0733 0.176 0.936 NK_HLA L2
ENSG00000111666 CHPT1 812198 sc-eQTL 9.59e-01 0.00937 0.18 0.936 NK_HLA L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 4.14e-01 0.118 0.145 0.936 NK_HLA L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.74e-01 -0.0756 0.18 0.936 NK_HLA L2
ENSG00000136048 DRAM1 631565 sc-eQTL 5.19e-01 -0.119 0.184 0.936 NK_HLA L2
ENSG00000185480 PARPBP 388960 sc-eQTL 3.08e-01 0.185 0.181 0.936 NK_HLA L2
ENSG00000075188 NUP37 389025 sc-eQTL 5.59e-01 -0.102 0.174 0.94 NK_cytokine L2
ENSG00000111666 CHPT1 812198 sc-eQTL 7.94e-01 -0.0428 0.163 0.94 NK_cytokine L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 8.52e-01 0.0232 0.124 0.94 NK_cytokine L2
ENSG00000120860 WASHC3 446996 sc-eQTL 4.16e-01 0.112 0.137 0.94 NK_cytokine L2
ENSG00000136048 DRAM1 631565 sc-eQTL 3.11e-01 -0.181 0.178 0.94 NK_cytokine L2
ENSG00000185480 PARPBP 388960 sc-eQTL 2.23e-01 -0.235 0.192 0.94 NK_cytokine L2
ENSG00000017427 IGF1 27401 sc-eQTL 9.93e-01 -0.00138 0.147 0.944 PB L2
ENSG00000075188 NUP37 389025 sc-eQTL 2.37e-01 0.234 0.197 0.944 PB L2
ENSG00000111666 CHPT1 812198 sc-eQTL 6.09e-01 -0.0786 0.153 0.944 PB L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 5.51e-02 0.421 0.217 0.944 PB L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.17e-01 0.0899 0.18 0.944 PB L2
ENSG00000136048 DRAM1 631565 sc-eQTL 3.35e-01 -0.176 0.182 0.944 PB L2
ENSG00000139351 SYCP3 769673 sc-eQTL 2.01e-01 -0.27 0.21 0.944 PB L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 3.42e-01 -0.18 0.188 0.944 PB L2
ENSG00000185480 PARPBP 388960 sc-eQTL 8.92e-01 -0.0265 0.194 0.944 PB L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 5.58e-01 0.105 0.179 0.944 PB L2
ENSG00000017427 IGF1 27401 sc-eQTL 3.09e-01 0.0678 0.0665 0.941 Pro_T L2
ENSG00000075188 NUP37 389025 sc-eQTL 6.95e-01 0.0528 0.134 0.941 Pro_T L2
ENSG00000111666 CHPT1 812198 sc-eQTL 7.61e-01 -0.0542 0.178 0.941 Pro_T L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 5.83e-02 0.249 0.131 0.941 Pro_T L2
ENSG00000120860 WASHC3 446996 sc-eQTL 8.27e-01 0.0339 0.155 0.941 Pro_T L2
ENSG00000136048 DRAM1 631565 sc-eQTL 2.18e-01 -0.164 0.132 0.941 Pro_T L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 5.84e-01 -0.0937 0.171 0.941 Pro_T L2
ENSG00000185480 PARPBP 388960 sc-eQTL 3.60e-01 -0.113 0.123 0.941 Pro_T L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 5.55e-01 -0.0796 0.134 0.941 Pro_T L2
ENSG00000075188 NUP37 389025 sc-eQTL 6.97e-01 -0.0709 0.182 0.94 Treg L2
ENSG00000111666 CHPT1 812198 sc-eQTL 3.74e-01 -0.168 0.189 0.94 Treg L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 8.83e-01 -0.0244 0.165 0.94 Treg L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.74e-02 0.276 0.15 0.94 Treg L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 1.25e-01 0.235 0.153 0.94 Treg L2
ENSG00000075188 NUP37 389025 sc-eQTL 9.36e-01 -0.0136 0.17 0.937 cDC L2
ENSG00000111666 CHPT1 812198 sc-eQTL 9.53e-01 0.00966 0.165 0.937 cDC L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 1.97e-01 0.275 0.212 0.937 cDC L2
ENSG00000120860 WASHC3 446996 sc-eQTL 4.49e-01 -0.143 0.188 0.937 cDC L2
ENSG00000136048 DRAM1 631565 sc-eQTL 8.53e-01 0.0272 0.147 0.937 cDC L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 2.74e-01 0.144 0.131 0.937 cDC L2
ENSG00000185480 PARPBP 388960 sc-eQTL 6.66e-01 0.0723 0.167 0.937 cDC L2
ENSG00000075188 NUP37 389025 sc-eQTL 4.46e-01 0.127 0.167 0.94 cMono_IL1B L2
ENSG00000111666 CHPT1 812198 sc-eQTL 4.86e-01 -0.0876 0.126 0.94 cMono_IL1B L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 1.35e-01 0.249 0.166 0.94 cMono_IL1B L2
ENSG00000120860 WASHC3 446996 sc-eQTL 7.54e-01 0.0455 0.145 0.94 cMono_IL1B L2
ENSG00000136048 DRAM1 631565 sc-eQTL 2.03e-01 0.157 0.123 0.94 cMono_IL1B L2
ENSG00000075188 NUP37 389025 sc-eQTL 2.85e-01 -0.193 0.18 0.94 cMono_S100A L2
ENSG00000111666 CHPT1 812198 sc-eQTL 4.94e-01 0.0947 0.138 0.94 cMono_S100A L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 3.15e-01 -0.169 0.168 0.94 cMono_S100A L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.45e-02 0.417 0.169 0.94 cMono_S100A L2
ENSG00000136048 DRAM1 631565 sc-eQTL 1.85e-01 0.177 0.133 0.94 cMono_S100A L2
ENSG00000075188 NUP37 389025 sc-eQTL 1.39e-01 -0.31 0.209 0.927 gdT L2
ENSG00000111666 CHPT1 812198 sc-eQTL 1.31e-01 -0.298 0.196 0.927 gdT L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 8.93e-02 0.252 0.147 0.927 gdT L2
ENSG00000120860 WASHC3 446996 sc-eQTL 6.75e-01 0.0808 0.192 0.927 gdT L2
ENSG00000136048 DRAM1 631565 sc-eQTL 5.80e-01 0.108 0.195 0.927 gdT L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 4.85e-01 0.134 0.192 0.927 gdT L2
ENSG00000185480 PARPBP 388960 sc-eQTL 1.02e-01 0.313 0.19 0.927 gdT L2
ENSG00000281344 HELLPAR 311560 sc-eQTL 6.09e-01 -0.0899 0.175 0.927 gdT L2
ENSG00000075188 NUP37 389025 sc-eQTL 8.84e-01 0.0272 0.186 0.938 intMono L2
ENSG00000111666 CHPT1 812198 sc-eQTL 5.96e-01 -0.0905 0.17 0.938 intMono L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 7.09e-01 0.0749 0.2 0.938 intMono L2
ENSG00000120860 WASHC3 446996 sc-eQTL 8.54e-01 -0.0345 0.188 0.938 intMono L2
ENSG00000136048 DRAM1 631565 sc-eQTL 9.82e-01 0.00363 0.164 0.938 intMono L2
ENSG00000075188 NUP37 389025 sc-eQTL 7.17e-01 -0.0679 0.187 0.943 ncMono L2
ENSG00000111666 CHPT1 812198 sc-eQTL 6.68e-01 -0.074 0.172 0.943 ncMono L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 7.52e-01 0.0654 0.206 0.943 ncMono L2
ENSG00000120860 WASHC3 446996 sc-eQTL 1.61e-01 0.234 0.166 0.943 ncMono L2
ENSG00000136048 DRAM1 631565 sc-eQTL 7.23e-01 -0.0551 0.155 0.943 ncMono L2
ENSG00000075188 NUP37 389025 sc-eQTL 1.38e-01 0.343 0.23 0.944 pDC L2
ENSG00000111666 CHPT1 812198 sc-eQTL 2.96e-01 -0.211 0.201 0.944 pDC L2
ENSG00000111670 GNPTAB 678186 sc-eQTL 5.49e-01 -0.128 0.213 0.944 pDC L2
ENSG00000120860 WASHC3 446996 sc-eQTL 9.37e-01 0.0155 0.195 0.944 pDC L2
ENSG00000136048 DRAM1 631565 sc-eQTL 1.33e-01 -0.226 0.15 0.944 pDC L2
ENSG00000179088 C12orf42 -986865 sc-eQTL 5.35e-01 0.125 0.2 0.944 pDC L2
ENSG00000185480 PARPBP 388960 sc-eQTL 9.12e-01 0.0221 0.2 0.944 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 27401 sc-eQTL 7.19e-01 0.0326 0.0904 0.94 B_Memory LOneK1K
ENSG00000075188 NUP37 389025 sc-eQTL 5.18e-01 0.118 0.182 0.94 B_Memory LOneK1K
ENSG00000111666 CHPT1 812198 sc-eQTL 4.54e-01 0.0717 0.0955 0.94 B_Memory LOneK1K
ENSG00000111670 GNPTAB 678186 sc-eQTL 7.39e-01 -0.05 0.15 0.94 B_Memory LOneK1K
ENSG00000120860 WASHC3 446996 sc-eQTL 7.77e-01 -0.037 0.131 0.94 B_Memory LOneK1K
ENSG00000136048 DRAM1 631565 sc-eQTL 2.10e-01 0.196 0.156 0.94 B_Memory LOneK1K
ENSG00000139351 SYCP3 769673 sc-eQTL 9.62e-01 0.00851 0.18 0.94 B_Memory LOneK1K
ENSG00000179088 C12orf42 -986865 sc-eQTL 3.27e-02 0.3 0.14 0.94 B_Memory LOneK1K
ENSG00000185480 PARPBP 388960 sc-eQTL 5.13e-01 -0.124 0.189 0.94 B_Memory LOneK1K
ENSG00000281344 HELLPAR 311560 sc-eQTL 4.91e-01 0.129 0.187 0.94 B_Memory LOneK1K
ENSG00000017427 IGF1 27401 sc-eQTL 7.46e-01 0.0341 0.105 0.94 B_Naive LOneK1K
ENSG00000075188 NUP37 389025 sc-eQTL 2.13e-01 0.215 0.172 0.94 B_Naive LOneK1K
ENSG00000111666 CHPT1 812198 sc-eQTL 6.71e-01 -0.0362 0.085 0.94 B_Naive LOneK1K
ENSG00000111670 GNPTAB 678186 sc-eQTL 4.51e-01 -0.0918 0.122 0.94 B_Naive LOneK1K
ENSG00000120860 WASHC3 446996 sc-eQTL 9.62e-01 -0.00616 0.127 0.94 B_Naive LOneK1K
ENSG00000136048 DRAM1 631565 sc-eQTL 7.44e-01 0.0437 0.134 0.94 B_Naive LOneK1K
ENSG00000139351 SYCP3 769673 sc-eQTL 2.88e-01 -0.205 0.192 0.94 B_Naive LOneK1K
ENSG00000179088 C12orf42 -986865 sc-eQTL 6.55e-01 -0.082 0.183 0.94 B_Naive LOneK1K
ENSG00000185480 PARPBP 388960 sc-eQTL 6.29e-01 0.095 0.196 0.94 B_Naive LOneK1K
ENSG00000281344 HELLPAR 311560 sc-eQTL 4.35e-01 0.14 0.178 0.94 B_Naive LOneK1K
ENSG00000075188 NUP37 389025 sc-eQTL 9.26e-01 -0.0144 0.154 0.94 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 812198 sc-eQTL 7.84e-01 -0.0342 0.124 0.94 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.37e-01 0.0756 0.16 0.94 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 446996 sc-eQTL 1.76e-01 0.191 0.14 0.94 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 631565 sc-eQTL 2.72e-02 0.254 0.114 0.94 CD14_Mono LOneK1K
ENSG00000075188 NUP37 389025 sc-eQTL 4.36e-01 -0.138 0.177 0.94 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 812198 sc-eQTL 9.29e-01 0.0138 0.155 0.94 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.19e-02 0.349 0.186 0.94 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 446996 sc-eQTL 2.86e-01 0.166 0.155 0.94 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 631565 sc-eQTL 6.52e-01 0.0605 0.134 0.94 CD16_Mono LOneK1K
ENSG00000075188 NUP37 389025 sc-eQTL 7.44e-01 -0.0543 0.166 0.94 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 812198 sc-eQTL 4.86e-01 -0.113 0.162 0.94 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB 678186 sc-eQTL 6.12e-01 0.0564 0.111 0.94 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 446996 sc-eQTL 4.58e-01 0.095 0.128 0.94 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 631565 sc-eQTL 1.34e-01 -0.258 0.171 0.94 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP 388960 sc-eQTL 8.62e-01 0.0352 0.202 0.94 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111670 GNPTAB 678186 eQTL 3.88e-03 0.0821 0.0284 0.00162 0.0 0.0594
ENSG00000120860 WASHC3 446996 eQTL 0.0165 0.0611 0.0255 0.0 0.0 0.0594
ENSG00000183395 PMCH 311312 pQTL 0.00402 -0.176 0.0611 0.00296 0.00154 0.0582

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111670 GNPTAB 678186 2.95e-07 1.5e-07 5.72e-08 2.05e-07 1.03e-07 8.33e-08 1.73e-07 5.62e-08 1.5e-07 7.6e-08 1.59e-07 1.15e-07 1.79e-07 7.95e-08 5.82e-08 7.98e-08 4.31e-08 1.64e-07 6.92e-08 5.04e-08 1.25e-07 1.31e-07 1.58e-07 2.87e-08 1.85e-07 1.31e-07 1.17e-07 1.04e-07 1.24e-07 9.88e-08 1.09e-07 3.6e-08 4.02e-08 8.89e-08 3.46e-08 3.07e-08 5.42e-08 8.71e-08 6.86e-08 3.75e-08 5.13e-08 1.52e-07 5.21e-08 1.24e-08 3.2e-08 1.8e-08 1.11e-07 1.9e-09 4.69e-08
ENSG00000120860 WASHC3 446996 7.74e-07 4.93e-07 8.99e-08 3.57e-07 1.13e-07 1.57e-07 4.09e-07 1.01e-07 2.81e-07 2.12e-07 4.74e-07 3.08e-07 5.54e-07 1.01e-07 1.45e-07 2e-07 1.73e-07 3.44e-07 1.51e-07 8.86e-08 1.68e-07 2.86e-07 2.81e-07 9.63e-08 6.02e-07 2.4e-07 2.24e-07 2.13e-07 2.31e-07 2.89e-07 2.43e-07 7.4e-08 5.07e-08 1.15e-07 1.95e-07 6.94e-08 9.9e-08 5.36e-08 4.99e-08 7.5e-08 4.78e-08 4.16e-07 3.19e-08 2.06e-08 9.15e-08 1.32e-08 9.73e-08 2.85e-09 5.56e-08