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Genes within 1Mb (chr12:101825988:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -655756 sc-eQTL 1.32e-01 0.0617 0.0408 0.667 B L1
ENSG00000075188 NUP37 -294132 sc-eQTL 8.16e-02 0.124 0.0708 0.667 B L1
ENSG00000111666 CHPT1 129041 sc-eQTL 3.94e-04 -0.152 0.0421 0.667 B L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.17e-03 0.201 0.0612 0.667 B L1
ENSG00000120800 UTP20 545883 sc-eQTL 7.93e-01 -0.0188 0.0713 0.667 B L1
ENSG00000120805 ARL1 418216 sc-eQTL 2.88e-01 0.0651 0.0611 0.667 B L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.54e-01 -0.0455 0.049 0.667 B L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 1.99e-02 0.129 0.0549 0.667 B L1
ENSG00000139351 SYCP3 86516 sc-eQTL 5.25e-03 -0.245 0.0868 0.667 B L1
ENSG00000185480 PARPBP -294197 sc-eQTL 7.23e-01 -0.03 0.0846 0.667 B L1
ENSG00000281344 HELLPAR -371597 sc-eQTL 3.29e-01 0.077 0.0788 0.667 B L1
ENSG00000075188 NUP37 -294132 sc-eQTL 5.60e-01 0.0379 0.065 0.667 CD4T L1
ENSG00000111666 CHPT1 129041 sc-eQTL 1.15e-09 -0.513 0.0804 0.667 CD4T L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.00e-21 0.523 0.0491 0.667 CD4T L1
ENSG00000120800 UTP20 545883 sc-eQTL 7.28e-01 -0.0235 0.0673 0.667 CD4T L1
ENSG00000120805 ARL1 418216 sc-eQTL 1.74e-01 -0.0894 0.0656 0.667 CD4T L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 2.09e-02 -0.106 0.0455 0.667 CD4T L1
ENSG00000075188 NUP37 -294132 sc-eQTL 6.68e-01 0.0345 0.0804 0.667 CD8T L1
ENSG00000111666 CHPT1 129041 sc-eQTL 5.04e-08 -0.459 0.0812 0.667 CD8T L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.72e-03 0.177 0.0559 0.667 CD8T L1
ENSG00000120800 UTP20 545883 sc-eQTL 3.00e-01 -0.0748 0.072 0.667 CD8T L1
ENSG00000120805 ARL1 418216 sc-eQTL 7.56e-01 -0.0248 0.0796 0.667 CD8T L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 6.04e-01 -0.0293 0.0566 0.667 CD8T L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 9.36e-01 0.00651 0.0811 0.667 CD8T L1
ENSG00000075188 NUP37 -294132 sc-eQTL 9.82e-01 -0.00199 0.09 0.664 DC L1
ENSG00000111666 CHPT1 129041 sc-eQTL 3.11e-02 -0.177 0.0814 0.664 DC L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 6.45e-01 0.0417 0.0905 0.664 DC L1
ENSG00000120800 UTP20 545883 sc-eQTL 1.91e-01 0.127 0.0966 0.664 DC L1
ENSG00000120805 ARL1 418216 sc-eQTL 6.50e-01 0.0457 0.1 0.664 DC L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 8.12e-01 -0.0205 0.0864 0.664 DC L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 3.62e-02 -0.149 0.0706 0.664 DC L1
ENSG00000185480 PARPBP -294197 sc-eQTL 9.22e-01 -0.00926 0.0941 0.664 DC L1
ENSG00000075188 NUP37 -294132 sc-eQTL 5.24e-01 -0.048 0.0752 0.667 Mono L1
ENSG00000111666 CHPT1 129041 sc-eQTL 1.27e-06 -0.301 0.0603 0.667 Mono L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.39e-02 -0.195 0.0787 0.667 Mono L1
ENSG00000120800 UTP20 545883 sc-eQTL 6.60e-01 0.0393 0.0891 0.667 Mono L1
ENSG00000120805 ARL1 418216 sc-eQTL 5.04e-01 0.0548 0.0819 0.667 Mono L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 4.18e-01 -0.0585 0.072 0.667 Mono L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 2.33e-02 0.133 0.0581 0.667 Mono L1
ENSG00000075188 NUP37 -294132 sc-eQTL 6.96e-01 -0.0318 0.0814 0.665 NK L1
ENSG00000111666 CHPT1 129041 sc-eQTL 2.12e-06 -0.349 0.0716 0.665 NK L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 7.13e-02 -0.0985 0.0543 0.665 NK L1
ENSG00000120800 UTP20 545883 sc-eQTL 4.42e-01 0.0678 0.088 0.665 NK L1
ENSG00000120805 ARL1 418216 sc-eQTL 1.58e-01 0.114 0.0806 0.665 NK L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.67e-01 -0.0181 0.061 0.665 NK L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.35e-01 0.0679 0.0867 0.665 NK L1
ENSG00000185480 PARPBP -294197 sc-eQTL 2.63e-01 -0.114 0.102 0.665 NK L1
ENSG00000017427 IGF1 -655756 sc-eQTL 3.00e-01 0.0323 0.0311 0.667 Other_T L1
ENSG00000075188 NUP37 -294132 sc-eQTL 9.68e-01 0.00241 0.0594 0.667 Other_T L1
ENSG00000111666 CHPT1 129041 sc-eQTL 1.22e-03 -0.277 0.0846 0.667 Other_T L1
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.51e-02 0.151 0.0617 0.667 Other_T L1
ENSG00000120800 UTP20 545883 sc-eQTL 6.93e-01 -0.0386 0.0977 0.667 Other_T L1
ENSG00000120805 ARL1 418216 sc-eQTL 7.45e-01 -0.0232 0.0712 0.667 Other_T L1
ENSG00000120860 WASHC3 -236161 sc-eQTL 4.08e-01 -0.0525 0.0632 0.667 Other_T L1
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.41e-02 0.146 0.0753 0.667 Other_T L1
ENSG00000185480 PARPBP -294197 sc-eQTL 2.08e-02 -0.146 0.0625 0.667 Other_T L1
ENSG00000281344 HELLPAR -371597 sc-eQTL 7.64e-01 -0.0221 0.0735 0.667 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -655756 sc-eQTL 1.67e-01 -0.0271 0.0196 0.684 B_Activated L2
ENSG00000075188 NUP37 -294132 sc-eQTL 1.87e-01 0.134 0.102 0.684 B_Activated L2
ENSG00000111666 CHPT1 129041 sc-eQTL 6.87e-02 -0.137 0.0747 0.684 B_Activated L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.55e-01 0.0991 0.107 0.684 B_Activated L2
ENSG00000120800 UTP20 545883 sc-eQTL 2.72e-01 -0.114 0.103 0.684 B_Activated L2
ENSG00000120805 ARL1 418216 sc-eQTL 9.99e-01 -0.000167 0.107 0.684 B_Activated L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 5.26e-01 -0.0648 0.102 0.684 B_Activated L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 8.81e-02 0.174 0.102 0.684 B_Activated L2
ENSG00000139351 SYCP3 86516 sc-eQTL 6.29e-01 -0.0407 0.084 0.684 B_Activated L2
ENSG00000185480 PARPBP -294197 sc-eQTL 5.71e-02 0.16 0.0838 0.684 B_Activated L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 6.10e-01 0.0407 0.0795 0.684 B_Activated L2
ENSG00000017427 IGF1 -655756 sc-eQTL 5.05e-01 0.0274 0.0411 0.667 B_Intermediate L2
ENSG00000075188 NUP37 -294132 sc-eQTL 2.78e-01 0.111 0.102 0.667 B_Intermediate L2
ENSG00000111666 CHPT1 129041 sc-eQTL 2.00e-01 -0.0703 0.0547 0.667 B_Intermediate L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 7.27e-01 0.0284 0.0812 0.667 B_Intermediate L2
ENSG00000120800 UTP20 545883 sc-eQTL 6.95e-01 -0.0354 0.0902 0.667 B_Intermediate L2
ENSG00000120805 ARL1 418216 sc-eQTL 2.90e-01 0.108 0.101 0.667 B_Intermediate L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.09e-01 0.0313 0.0839 0.667 B_Intermediate L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 7.95e-01 0.0234 0.09 0.667 B_Intermediate L2
ENSG00000139351 SYCP3 86516 sc-eQTL 7.49e-01 -0.0303 0.0947 0.667 B_Intermediate L2
ENSG00000185480 PARPBP -294197 sc-eQTL 3.30e-01 0.0969 0.0992 0.667 B_Intermediate L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 8.26e-01 0.0209 0.0953 0.667 B_Intermediate L2
ENSG00000017427 IGF1 -655756 sc-eQTL 1.37e-01 -0.0551 0.0369 0.664 B_Memory L2
ENSG00000075188 NUP37 -294132 sc-eQTL 3.22e-01 0.0972 0.0978 0.664 B_Memory L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.23e-03 -0.205 0.0624 0.664 B_Memory L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 9.22e-01 -0.00864 0.0876 0.664 B_Memory L2
ENSG00000120800 UTP20 545883 sc-eQTL 7.59e-01 -0.0296 0.0962 0.664 B_Memory L2
ENSG00000120805 ARL1 418216 sc-eQTL 5.56e-01 0.0564 0.0956 0.664 B_Memory L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.93e-01 -0.0731 0.0854 0.664 B_Memory L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.39e-01 0.0552 0.0897 0.664 B_Memory L2
ENSG00000139351 SYCP3 86516 sc-eQTL 3.47e-01 -0.0869 0.0922 0.664 B_Memory L2
ENSG00000185480 PARPBP -294197 sc-eQTL 4.05e-01 0.0787 0.0944 0.664 B_Memory L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 9.56e-01 -0.00475 0.086 0.664 B_Memory L2
ENSG00000017427 IGF1 -655756 sc-eQTL 9.99e-01 -3.25e-05 0.0516 0.667 B_Naive1 L2
ENSG00000075188 NUP37 -294132 sc-eQTL 9.55e-01 -0.00531 0.0934 0.667 B_Naive1 L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.02e-02 -0.124 0.0478 0.667 B_Naive1 L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.27e-02 0.17 0.0676 0.667 B_Naive1 L2
ENSG00000120800 UTP20 545883 sc-eQTL 5.80e-01 -0.0451 0.0814 0.667 B_Naive1 L2
ENSG00000120805 ARL1 418216 sc-eQTL 4.17e-01 0.0739 0.0908 0.667 B_Naive1 L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.82e-01 -0.0602 0.0687 0.667 B_Naive1 L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 8.37e-01 0.0154 0.0746 0.667 B_Naive1 L2
ENSG00000139351 SYCP3 86516 sc-eQTL 3.22e-02 -0.216 0.1 0.667 B_Naive1 L2
ENSG00000185480 PARPBP -294197 sc-eQTL 2.58e-01 -0.112 0.0984 0.667 B_Naive1 L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 2.58e-01 -0.104 0.0921 0.667 B_Naive1 L2
ENSG00000017427 IGF1 -655756 sc-eQTL 5.37e-01 -0.0279 0.0452 0.665 B_Naive2 L2
ENSG00000075188 NUP37 -294132 sc-eQTL 1.51e-01 0.133 0.0924 0.665 B_Naive2 L2
ENSG00000111666 CHPT1 129041 sc-eQTL 3.97e-02 -0.102 0.0492 0.665 B_Naive2 L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.56e-03 0.241 0.0752 0.665 B_Naive2 L2
ENSG00000120800 UTP20 545883 sc-eQTL 6.00e-01 -0.0468 0.0892 0.665 B_Naive2 L2
ENSG00000120805 ARL1 418216 sc-eQTL 8.88e-01 0.0138 0.098 0.665 B_Naive2 L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 4.63e-01 -0.0627 0.0853 0.665 B_Naive2 L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 3.90e-01 0.0728 0.0844 0.665 B_Naive2 L2
ENSG00000139351 SYCP3 86516 sc-eQTL 1.33e-01 -0.134 0.0885 0.665 B_Naive2 L2
ENSG00000185480 PARPBP -294197 sc-eQTL 5.16e-01 0.0668 0.103 0.665 B_Naive2 L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 6.75e-01 0.0372 0.0884 0.665 B_Naive2 L2
ENSG00000075188 NUP37 -294132 sc-eQTL 9.49e-01 0.00626 0.0981 0.666 CD4_CTL L2
ENSG00000111666 CHPT1 129041 sc-eQTL 3.96e-03 -0.281 0.0962 0.666 CD4_CTL L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.64e-02 0.179 0.085 0.666 CD4_CTL L2
ENSG00000120800 UTP20 545883 sc-eQTL 8.82e-01 0.014 0.0945 0.666 CD4_CTL L2
ENSG00000120805 ARL1 418216 sc-eQTL 6.87e-01 0.0404 0.1 0.666 CD4_CTL L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.71e-01 0.028 0.096 0.666 CD4_CTL L2
ENSG00000075188 NUP37 -294132 sc-eQTL 5.60e-01 0.0436 0.0747 0.667 CD4_Naive L2
ENSG00000111666 CHPT1 129041 sc-eQTL 7.22e-09 -0.48 0.0797 0.667 CD4_Naive L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.18e-20 0.558 0.0543 0.667 CD4_Naive L2
ENSG00000120800 UTP20 545883 sc-eQTL 5.19e-01 -0.0468 0.0724 0.667 CD4_Naive L2
ENSG00000120805 ARL1 418216 sc-eQTL 2.45e-01 -0.0911 0.0782 0.667 CD4_Naive L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 4.52e-02 -0.109 0.0543 0.667 CD4_Naive L2
ENSG00000075188 NUP37 -294132 sc-eQTL 6.57e-01 0.0352 0.079 0.667 CD4_TCM L2
ENSG00000111666 CHPT1 129041 sc-eQTL 7.39e-10 -0.538 0.0834 0.667 CD4_TCM L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.00e-05 0.305 0.0674 0.667 CD4_TCM L2
ENSG00000120800 UTP20 545883 sc-eQTL 6.64e-01 -0.0384 0.0883 0.667 CD4_TCM L2
ENSG00000120805 ARL1 418216 sc-eQTL 2.60e-01 -0.0932 0.0824 0.667 CD4_TCM L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 1.23e-01 -0.0835 0.054 0.667 CD4_TCM L2
ENSG00000075188 NUP37 -294132 sc-eQTL 7.78e-01 -0.0269 0.0951 0.667 CD4_TEM L2
ENSG00000111666 CHPT1 129041 sc-eQTL 2.34e-09 -0.525 0.0842 0.667 CD4_TEM L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.87e-02 0.206 0.087 0.667 CD4_TEM L2
ENSG00000120800 UTP20 545883 sc-eQTL 4.31e-01 -0.0751 0.0953 0.667 CD4_TEM L2
ENSG00000120805 ARL1 418216 sc-eQTL 6.85e-01 -0.0366 0.0901 0.667 CD4_TEM L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 8.02e-01 0.0203 0.0808 0.667 CD4_TEM L2
ENSG00000075188 NUP37 -294132 sc-eQTL 1.90e-01 0.112 0.0849 0.667 CD8_CTL L2
ENSG00000111666 CHPT1 129041 sc-eQTL 9.93e-09 -0.483 0.0808 0.667 CD8_CTL L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.59e-01 -0.0409 0.0698 0.667 CD8_CTL L2
ENSG00000120800 UTP20 545883 sc-eQTL 3.37e-02 -0.2 0.0935 0.667 CD8_CTL L2
ENSG00000120805 ARL1 418216 sc-eQTL 6.26e-01 -0.0456 0.0934 0.667 CD8_CTL L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 9.68e-01 0.00323 0.0798 0.667 CD8_CTL L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.29e-01 -0.0624 0.0991 0.667 CD8_CTL L2
ENSG00000075188 NUP37 -294132 sc-eQTL 7.77e-01 0.0256 0.0903 0.667 CD8_Naive L2
ENSG00000111666 CHPT1 129041 sc-eQTL 6.35e-06 -0.396 0.0855 0.667 CD8_Naive L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.87e-13 0.554 0.071 0.667 CD8_Naive L2
ENSG00000120800 UTP20 545883 sc-eQTL 5.18e-01 0.0555 0.0856 0.667 CD8_Naive L2
ENSG00000120805 ARL1 418216 sc-eQTL 8.67e-01 -0.0156 0.093 0.667 CD8_Naive L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.24e-01 0.0217 0.0613 0.667 CD8_Naive L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 6.22e-01 -0.0467 0.0945 0.667 CD8_Naive L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.88e-01 -0.0686 0.0986 0.667 CD8_TCM L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.15e-02 -0.222 0.0871 0.667 CD8_TCM L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.71e-03 0.284 0.0893 0.667 CD8_TCM L2
ENSG00000120800 UTP20 545883 sc-eQTL 7.45e-01 -0.0325 0.0999 0.667 CD8_TCM L2
ENSG00000120805 ARL1 418216 sc-eQTL 7.72e-02 0.173 0.0974 0.667 CD8_TCM L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 1.60e-01 -0.123 0.0874 0.667 CD8_TCM L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 2.63e-01 0.107 0.0955 0.667 CD8_TCM L2
ENSG00000075188 NUP37 -294132 sc-eQTL 9.06e-02 0.16 0.0939 0.66 CD8_TEM L2
ENSG00000111666 CHPT1 129041 sc-eQTL 9.33e-04 -0.292 0.087 0.66 CD8_TEM L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.26e-01 0.146 0.0952 0.66 CD8_TEM L2
ENSG00000120800 UTP20 545883 sc-eQTL 7.49e-01 -0.033 0.103 0.66 CD8_TEM L2
ENSG00000120805 ARL1 418216 sc-eQTL 2.68e-01 -0.109 0.098 0.66 CD8_TEM L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.19e-01 0.031 0.0859 0.66 CD8_TEM L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 7.57e-01 -0.0294 0.0947 0.66 CD8_TEM L2
ENSG00000017427 IGF1 -655756 sc-eQTL 2.40e-01 0.0397 0.0337 0.667 MAIT L2
ENSG00000075188 NUP37 -294132 sc-eQTL 8.77e-01 0.0147 0.0948 0.667 MAIT L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.01e-02 -0.236 0.091 0.667 MAIT L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.41e-02 0.173 0.0811 0.667 MAIT L2
ENSG00000120800 UTP20 545883 sc-eQTL 2.20e-01 -0.12 0.0979 0.667 MAIT L2
ENSG00000120805 ARL1 418216 sc-eQTL 3.85e-01 -0.087 0.1 0.667 MAIT L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.69e-01 -0.0749 0.0831 0.667 MAIT L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 1.23e-02 0.235 0.0931 0.667 MAIT L2
ENSG00000185480 PARPBP -294197 sc-eQTL 8.70e-01 -0.0152 0.0926 0.667 MAIT L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 9.22e-01 -0.00805 0.082 0.667 MAIT L2
ENSG00000075188 NUP37 -294132 sc-eQTL 6.99e-01 0.0406 0.105 0.664 NK_CD56bright L2
ENSG00000111666 CHPT1 129041 sc-eQTL 6.29e-03 -0.206 0.0746 0.664 NK_CD56bright L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.33e-01 -0.0548 0.0877 0.664 NK_CD56bright L2
ENSG00000120800 UTP20 545883 sc-eQTL 9.51e-01 0.00636 0.103 0.664 NK_CD56bright L2
ENSG00000120805 ARL1 418216 sc-eQTL 9.89e-01 0.00137 0.1 0.664 NK_CD56bright L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 7.24e-01 -0.032 0.0905 0.664 NK_CD56bright L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 6.38e-01 0.0449 0.0952 0.664 NK_CD56bright L2
ENSG00000185480 PARPBP -294197 sc-eQTL 2.89e-02 -0.219 0.0994 0.664 NK_CD56bright L2
ENSG00000075188 NUP37 -294132 sc-eQTL 8.68e-01 -0.015 0.0904 0.664 NK_CD56dim L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.42e-06 -0.415 0.0835 0.664 NK_CD56dim L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 6.00e-02 -0.125 0.0662 0.664 NK_CD56dim L2
ENSG00000120800 UTP20 545883 sc-eQTL 3.74e-01 0.0824 0.0925 0.664 NK_CD56dim L2
ENSG00000120805 ARL1 418216 sc-eQTL 1.95e-01 0.116 0.0893 0.664 NK_CD56dim L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 8.40e-01 -0.0155 0.0768 0.664 NK_CD56dim L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 2.96e-01 0.0975 0.093 0.664 NK_CD56dim L2
ENSG00000185480 PARPBP -294197 sc-eQTL 9.35e-01 0.00857 0.105 0.664 NK_CD56dim L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.97e-01 0.0639 0.0939 0.66 NK_HLA L2
ENSG00000111666 CHPT1 129041 sc-eQTL 5.65e-04 -0.328 0.0936 0.66 NK_HLA L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.06e-02 -0.178 0.0765 0.66 NK_HLA L2
ENSG00000120800 UTP20 545883 sc-eQTL 5.79e-01 -0.0563 0.101 0.66 NK_HLA L2
ENSG00000120805 ARL1 418216 sc-eQTL 1.81e-01 -0.138 0.103 0.66 NK_HLA L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 1.56e-01 0.136 0.0957 0.66 NK_HLA L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.40e-01 0.0606 0.0988 0.66 NK_HLA L2
ENSG00000185480 PARPBP -294197 sc-eQTL 9.61e-01 -0.00471 0.0972 0.66 NK_HLA L2
ENSG00000075188 NUP37 -294132 sc-eQTL 2.72e-01 -0.101 0.0916 0.664 NK_cytokine L2
ENSG00000111666 CHPT1 129041 sc-eQTL 5.40e-04 -0.294 0.0835 0.664 NK_cytokine L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 4.43e-01 -0.0501 0.0652 0.664 NK_cytokine L2
ENSG00000120800 UTP20 545883 sc-eQTL 3.71e-01 0.0815 0.0909 0.664 NK_cytokine L2
ENSG00000120805 ARL1 418216 sc-eQTL 5.52e-02 0.175 0.0908 0.664 NK_cytokine L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 5.46e-01 0.0436 0.0721 0.664 NK_cytokine L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 9.10e-01 0.0106 0.0939 0.664 NK_cytokine L2
ENSG00000185480 PARPBP -294197 sc-eQTL 4.62e-01 -0.0747 0.101 0.664 NK_cytokine L2
ENSG00000017427 IGF1 -655756 sc-eQTL 1.99e-01 -0.0959 0.0741 0.678 PB L2
ENSG00000075188 NUP37 -294132 sc-eQTL 1.25e-01 0.154 0.0995 0.678 PB L2
ENSG00000111666 CHPT1 129041 sc-eQTL 5.28e-01 -0.0493 0.0778 0.678 PB L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 9.07e-01 0.0131 0.112 0.678 PB L2
ENSG00000120800 UTP20 545883 sc-eQTL 3.91e-01 0.111 0.128 0.678 PB L2
ENSG00000120805 ARL1 418216 sc-eQTL 8.16e-01 0.0185 0.0791 0.678 PB L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 2.86e-01 0.0974 0.0908 0.678 PB L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.70e-01 0.067 0.0924 0.678 PB L2
ENSG00000139351 SYCP3 86516 sc-eQTL 6.39e-01 -0.0505 0.107 0.678 PB L2
ENSG00000185480 PARPBP -294197 sc-eQTL 2.35e-01 -0.117 0.098 0.678 PB L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 1.06e-01 -0.147 0.0902 0.678 PB L2
ENSG00000017427 IGF1 -655756 sc-eQTL 2.15e-01 0.0416 0.0335 0.665 Pro_T L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.74e-01 0.0486 0.0677 0.665 Pro_T L2
ENSG00000111666 CHPT1 129041 sc-eQTL 9.23e-02 -0.151 0.0893 0.665 Pro_T L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.97e-01 0.0352 0.0664 0.665 Pro_T L2
ENSG00000120800 UTP20 545883 sc-eQTL 6.11e-01 0.0484 0.0949 0.665 Pro_T L2
ENSG00000120805 ARL1 418216 sc-eQTL 1.63e-01 0.1 0.0715 0.665 Pro_T L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 6.40e-01 0.0366 0.078 0.665 Pro_T L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 1.21e-01 0.104 0.0665 0.665 Pro_T L2
ENSG00000185480 PARPBP -294197 sc-eQTL 1.83e-01 -0.0825 0.0617 0.665 Pro_T L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 2.19e-01 0.0834 0.0676 0.665 Pro_T L2
ENSG00000075188 NUP37 -294132 sc-eQTL 7.72e-01 -0.0279 0.0964 0.667 Treg L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.08e-06 -0.476 0.0948 0.667 Treg L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.29e-02 0.198 0.0865 0.667 Treg L2
ENSG00000120800 UTP20 545883 sc-eQTL 7.00e-01 0.0368 0.0954 0.667 Treg L2
ENSG00000120805 ARL1 418216 sc-eQTL 8.48e-01 0.019 0.0986 0.667 Treg L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 2.44e-01 -0.0932 0.0799 0.667 Treg L2
ENSG00000075188 NUP37 -294132 sc-eQTL 5.55e-01 -0.0505 0.0855 0.661 cDC L2
ENSG00000111666 CHPT1 129041 sc-eQTL 3.03e-03 -0.245 0.0815 0.661 cDC L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.61e-01 -0.0984 0.107 0.661 cDC L2
ENSG00000120800 UTP20 545883 sc-eQTL 8.74e-01 0.0155 0.0976 0.661 cDC L2
ENSG00000120805 ARL1 418216 sc-eQTL 8.16e-01 -0.0236 0.101 0.661 cDC L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 1.21e-01 -0.147 0.0944 0.661 cDC L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.17e-01 -0.0481 0.074 0.661 cDC L2
ENSG00000185480 PARPBP -294197 sc-eQTL 9.81e-01 -0.00206 0.0844 0.661 cDC L2
ENSG00000075188 NUP37 -294132 sc-eQTL 6.43e-01 -0.04 0.0863 0.667 cMono_IL1B L2
ENSG00000111666 CHPT1 129041 sc-eQTL 7.12e-05 -0.254 0.0627 0.667 cMono_IL1B L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.06e-02 -0.199 0.0853 0.667 cMono_IL1B L2
ENSG00000120800 UTP20 545883 sc-eQTL 2.13e-01 -0.121 0.0968 0.667 cMono_IL1B L2
ENSG00000120805 ARL1 418216 sc-eQTL 3.53e-01 0.0809 0.0869 0.667 cMono_IL1B L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 5.03e-01 0.0503 0.075 0.667 cMono_IL1B L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.26e-02 0.129 0.0634 0.667 cMono_IL1B L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.18e-01 -0.0757 0.0932 0.667 cMono_S100A L2
ENSG00000111666 CHPT1 129041 sc-eQTL 7.99e-03 -0.188 0.0703 0.667 cMono_S100A L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 9.38e-01 -0.00682 0.087 0.667 cMono_S100A L2
ENSG00000120800 UTP20 545883 sc-eQTL 1.54e-01 0.145 0.101 0.667 cMono_S100A L2
ENSG00000120805 ARL1 418216 sc-eQTL 4.99e-01 0.0647 0.0957 0.667 cMono_S100A L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 2.24e-01 -0.108 0.0882 0.667 cMono_S100A L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 9.59e-03 0.178 0.0679 0.667 cMono_S100A L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.73e-02 -0.237 0.118 0.648 gdT L2
ENSG00000111666 CHPT1 129041 sc-eQTL 1.56e-02 -0.27 0.11 0.648 gdT L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.40e-01 -0.052 0.0847 0.648 gdT L2
ENSG00000120800 UTP20 545883 sc-eQTL 8.45e-01 0.0219 0.112 0.648 gdT L2
ENSG00000120805 ARL1 418216 sc-eQTL 6.68e-01 -0.0504 0.117 0.648 gdT L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 6.77e-03 -0.293 0.107 0.648 gdT L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 2.34e-01 0.132 0.111 0.648 gdT L2
ENSG00000185480 PARPBP -294197 sc-eQTL 9.51e-01 0.0067 0.109 0.648 gdT L2
ENSG00000281344 HELLPAR -371597 sc-eQTL 8.83e-01 0.0147 0.1 0.648 gdT L2
ENSG00000075188 NUP37 -294132 sc-eQTL 7.39e-01 0.031 0.093 0.664 intMono L2
ENSG00000111666 CHPT1 129041 sc-eQTL 9.12e-05 -0.327 0.0819 0.664 intMono L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 1.08e-01 -0.16 0.0993 0.664 intMono L2
ENSG00000120800 UTP20 545883 sc-eQTL 4.86e-01 0.0653 0.0934 0.664 intMono L2
ENSG00000120805 ARL1 418216 sc-eQTL 9.68e-02 -0.16 0.0962 0.664 intMono L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.25e-01 -0.0921 0.0934 0.664 intMono L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 9.25e-01 0.00772 0.0818 0.664 intMono L2
ENSG00000075188 NUP37 -294132 sc-eQTL 4.91e-01 0.0641 0.0929 0.658 ncMono L2
ENSG00000111666 CHPT1 129041 sc-eQTL 3.47e-04 -0.303 0.0832 0.658 ncMono L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.16e-01 0.0669 0.103 0.658 ncMono L2
ENSG00000120800 UTP20 545883 sc-eQTL 5.93e-01 0.0481 0.0899 0.658 ncMono L2
ENSG00000120805 ARL1 418216 sc-eQTL 4.51e-01 -0.0653 0.0863 0.658 ncMono L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.21e-01 -0.0825 0.0829 0.658 ncMono L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.21e-01 0.0623 0.0773 0.658 ncMono L2
ENSG00000075188 NUP37 -294132 sc-eQTL 8.19e-01 0.0243 0.106 0.658 pDC L2
ENSG00000111666 CHPT1 129041 sc-eQTL 5.61e-02 -0.176 0.0915 0.658 pDC L2
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.53e-02 0.205 0.0966 0.658 pDC L2
ENSG00000120800 UTP20 545883 sc-eQTL 1.00e-01 0.16 0.0968 0.658 pDC L2
ENSG00000120805 ARL1 418216 sc-eQTL 2.75e-01 0.112 0.102 0.658 pDC L2
ENSG00000120860 WASHC3 -236161 sc-eQTL 2.95e-01 0.0938 0.0892 0.658 pDC L2
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.19e-02 -0.14 0.0683 0.658 pDC L2
ENSG00000185480 PARPBP -294197 sc-eQTL 2.18e-01 -0.113 0.0915 0.658 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -655756 sc-eQTL 9.63e-01 0.00219 0.0476 0.667 B_Memory LOneK1K
ENSG00000075188 NUP37 -294132 sc-eQTL 2.00e-01 0.122 0.0952 0.667 B_Memory LOneK1K
ENSG00000111666 CHPT1 129041 sc-eQTL 2.15e-02 -0.115 0.0497 0.667 B_Memory LOneK1K
ENSG00000111670 GNPTAB -4971 sc-eQTL 4.87e-01 0.0549 0.0789 0.667 B_Memory LOneK1K
ENSG00000120800 UTP20 545883 sc-eQTL 7.48e-01 -0.0261 0.0814 0.667 B_Memory LOneK1K
ENSG00000120805 ARL1 418216 sc-eQTL 2.67e-01 0.102 0.0918 0.667 B_Memory LOneK1K
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.33e-01 -0.0665 0.0686 0.667 B_Memory LOneK1K
ENSG00000136048 DRAM1 -51592 sc-eQTL 5.24e-02 0.159 0.0816 0.667 B_Memory LOneK1K
ENSG00000139351 SYCP3 86516 sc-eQTL 2.79e-01 -0.103 0.0946 0.667 B_Memory LOneK1K
ENSG00000185480 PARPBP -294197 sc-eQTL 1.26e-01 0.152 0.0987 0.667 B_Memory LOneK1K
ENSG00000281344 HELLPAR -371597 sc-eQTL 6.37e-01 0.0465 0.0984 0.667 B_Memory LOneK1K
ENSG00000017427 IGF1 -655756 sc-eQTL 7.58e-01 -0.0168 0.0547 0.667 B_Naive LOneK1K
ENSG00000075188 NUP37 -294132 sc-eQTL 6.47e-01 0.041 0.0894 0.667 B_Naive LOneK1K
ENSG00000111666 CHPT1 129041 sc-eQTL 3.49e-03 -0.128 0.0433 0.667 B_Naive LOneK1K
ENSG00000111670 GNPTAB -4971 sc-eQTL 3.94e-04 0.221 0.0614 0.667 B_Naive LOneK1K
ENSG00000120800 UTP20 545883 sc-eQTL 4.86e-01 -0.054 0.0773 0.667 B_Naive LOneK1K
ENSG00000120805 ARL1 418216 sc-eQTL 6.79e-01 0.0366 0.0883 0.667 B_Naive LOneK1K
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.97e-01 -0.0561 0.066 0.667 B_Naive LOneK1K
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.67e-01 0.0505 0.0693 0.667 B_Naive LOneK1K
ENSG00000139351 SYCP3 86516 sc-eQTL 3.43e-02 -0.211 0.099 0.667 B_Naive LOneK1K
ENSG00000185480 PARPBP -294197 sc-eQTL 4.56e-01 -0.0759 0.102 0.667 B_Naive LOneK1K
ENSG00000281344 HELLPAR -371597 sc-eQTL 6.88e-01 -0.0374 0.0927 0.667 B_Naive LOneK1K
ENSG00000075188 NUP37 -294132 sc-eQTL 4.21e-01 -0.0638 0.0792 0.667 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 129041 sc-eQTL 1.32e-04 -0.241 0.0619 0.667 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -4971 sc-eQTL 2.19e-02 -0.188 0.0815 0.667 CD14_Mono LOneK1K
ENSG00000120800 UTP20 545883 sc-eQTL 8.61e-01 0.0171 0.0976 0.667 CD14_Mono LOneK1K
ENSG00000120805 ARL1 418216 sc-eQTL 1.89e-01 0.11 0.0831 0.667 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -236161 sc-eQTL 3.49e-01 -0.068 0.0725 0.667 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -51592 sc-eQTL 4.06e-03 0.17 0.0584 0.667 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -294132 sc-eQTL 6.14e-01 0.0457 0.0904 0.666 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 129041 sc-eQTL 2.81e-07 -0.394 0.0742 0.666 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -4971 sc-eQTL 4.30e-01 -0.0756 0.0956 0.666 CD16_Mono LOneK1K
ENSG00000120800 UTP20 545883 sc-eQTL 5.39e-01 0.0565 0.092 0.666 CD16_Mono LOneK1K
ENSG00000120805 ARL1 418216 sc-eQTL 2.62e-01 -0.102 0.0912 0.666 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -236161 sc-eQTL 5.49e-02 -0.152 0.0787 0.666 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -51592 sc-eQTL 7.53e-01 0.0216 0.0684 0.666 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -294132 sc-eQTL 6.95e-01 -0.0337 0.086 0.664 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 129041 sc-eQTL 6.74e-07 -0.406 0.0792 0.664 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -4971 sc-eQTL 5.90e-02 -0.108 0.057 0.664 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 545883 sc-eQTL 2.83e-01 0.0947 0.088 0.664 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 418216 sc-eQTL 6.94e-02 0.148 0.0812 0.664 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -236161 sc-eQTL 9.49e-01 -0.00422 0.0663 0.664 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -51592 sc-eQTL 3.60e-01 0.0815 0.0889 0.664 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -294197 sc-eQTL 8.39e-01 -0.0213 0.105 0.664 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 129041 eQTL 1.13e-28 -0.279 0.0243 0.0 0.0 0.326
ENSG00000111670 GNPTAB -4971 eQTL 7.67e-03 -0.0381 0.0143 0.0 0.0 0.326
ENSG00000120860 WASHC3 -236161 eQTL 0.0298 -0.0279 0.0128 0.0 0.0 0.326

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 129041 7.8e-06 8.15e-06 8.27e-07 3.37e-06 1.73e-06 2.14e-06 8.57e-06 1.09e-06 4.5e-06 3.09e-06 8.91e-06 3.26e-06 1.11e-05 2.32e-06 1.09e-06 3.97e-06 3.09e-06 3.91e-06 1.65e-06 1.44e-06 2.69e-06 7.4e-06 5.34e-06 1.4e-06 8.96e-06 1.95e-06 3.05e-06 1.74e-06 5.81e-06 4.98e-06 3.09e-06 4.91e-07 5.46e-07 1.71e-06 2.09e-06 1.06e-06 9.66e-07 4.59e-07 1.05e-06 3.22e-07 1.96e-07 1.17e-05 6.4e-07 1.96e-07 3.43e-07 9.68e-07 7.92e-07 2.15e-07 3.29e-07
ENSG00000120860 WASHC3 -236161 3.91e-06 2.53e-06 4.65e-07 1.44e-06 4.77e-07 8.45e-07 1.55e-06 4.13e-07 1.66e-06 7.7e-07 2.35e-06 1.29e-06 3.24e-06 9.7e-07 6.23e-07 1.16e-06 9.63e-07 1.46e-06 9.4e-07 8.94e-07 6.41e-07 3.02e-06 1.95e-06 5.72e-07 3.15e-06 9.84e-07 1.21e-06 1.04e-06 1.7e-06 1.61e-06 1.15e-06 2.42e-07 3.55e-07 5.72e-07 7.59e-07 5.39e-07 7.4e-07 3.63e-07 4.75e-07 3.34e-07 2.57e-07 4.14e-06 4.41e-07 1.38e-07 2.98e-07 3.38e-07 2.21e-07 7.74e-08 2.76e-07