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Genes within 1Mb (chr12:101701823:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -779921 sc-eQTL 6.70e-01 -0.0222 0.052 0.827 B L1
ENSG00000075188 NUP37 -418297 sc-eQTL 9.33e-01 0.00766 0.0905 0.827 B L1
ENSG00000111666 CHPT1 4876 sc-eQTL 4.76e-01 -0.0393 0.0549 0.827 B L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.17e-01 0.125 0.0791 0.827 B L1
ENSG00000120800 UTP20 421718 sc-eQTL 6.76e-01 0.0378 0.0905 0.827 B L1
ENSG00000120805 ARL1 294051 sc-eQTL 7.62e-01 -0.0236 0.0778 0.827 B L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.71e-01 0.0101 0.0623 0.827 B L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.15e-01 0.0575 0.0705 0.827 B L1
ENSG00000139351 SYCP3 -37649 sc-eQTL 7.47e-02 -0.199 0.111 0.827 B L1
ENSG00000185480 PARPBP -418362 sc-eQTL 2.15e-01 0.133 0.107 0.827 B L1
ENSG00000281344 HELLPAR -495762 sc-eQTL 7.16e-01 0.0364 0.1 0.827 B L1
ENSG00000075188 NUP37 -418297 sc-eQTL 8.21e-04 -0.27 0.0795 0.827 CD4T L1
ENSG00000111666 CHPT1 4876 sc-eQTL 2.85e-02 -0.24 0.109 0.827 CD4T L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.98e-01 0.0984 0.0761 0.827 CD4T L1
ENSG00000120800 UTP20 421718 sc-eQTL 7.52e-01 -0.0268 0.0845 0.827 CD4T L1
ENSG00000120805 ARL1 294051 sc-eQTL 4.25e-01 -0.066 0.0825 0.827 CD4T L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 3.27e-02 -0.123 0.0572 0.827 CD4T L1
ENSG00000075188 NUP37 -418297 sc-eQTL 1.95e-02 0.235 0.0998 0.827 CD8T L1
ENSG00000111666 CHPT1 4876 sc-eQTL 1.55e-02 -0.264 0.108 0.827 CD8T L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 9.20e-01 0.00724 0.0719 0.827 CD8T L1
ENSG00000120800 UTP20 421718 sc-eQTL 9.11e-01 -0.0102 0.0907 0.827 CD8T L1
ENSG00000120805 ARL1 294051 sc-eQTL 4.90e-01 -0.0692 0.1 0.827 CD8T L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.85e-01 -0.0389 0.0711 0.827 CD8T L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.96e-01 0.132 0.102 0.827 CD8T L1
ENSG00000075188 NUP37 -418297 sc-eQTL 7.33e-01 0.0403 0.118 0.831 DC L1
ENSG00000111666 CHPT1 4876 sc-eQTL 9.50e-01 0.00676 0.108 0.831 DC L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 8.64e-01 -0.0203 0.118 0.831 DC L1
ENSG00000120800 UTP20 421718 sc-eQTL 9.11e-01 0.0141 0.127 0.831 DC L1
ENSG00000120805 ARL1 294051 sc-eQTL 2.65e-01 0.146 0.131 0.831 DC L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.96e-01 -0.0148 0.113 0.831 DC L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.09e-01 -0.149 0.0927 0.831 DC L1
ENSG00000185480 PARPBP -418362 sc-eQTL 6.18e-01 -0.0614 0.123 0.831 DC L1
ENSG00000075188 NUP37 -418297 sc-eQTL 4.53e-01 -0.0711 0.0946 0.827 Mono L1
ENSG00000111666 CHPT1 4876 sc-eQTL 2.22e-02 -0.182 0.0792 0.827 Mono L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.99e-01 0.104 0.1 0.827 Mono L1
ENSG00000120800 UTP20 421718 sc-eQTL 2.23e-01 -0.137 0.112 0.827 Mono L1
ENSG00000120805 ARL1 294051 sc-eQTL 7.67e-01 -0.0305 0.103 0.827 Mono L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.46e-01 -0.132 0.0903 0.827 Mono L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 8.45e-02 0.127 0.0735 0.827 Mono L1
ENSG00000075188 NUP37 -418297 sc-eQTL 9.85e-01 0.00188 0.102 0.826 NK L1
ENSG00000111666 CHPT1 4876 sc-eQTL 4.75e-03 -0.266 0.0933 0.826 NK L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 4.22e-01 -0.0553 0.0688 0.826 NK L1
ENSG00000120800 UTP20 421718 sc-eQTL 2.95e-01 0.116 0.111 0.826 NK L1
ENSG00000120805 ARL1 294051 sc-eQTL 8.17e-01 0.0236 0.102 0.826 NK L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 2.20e-01 -0.0941 0.0765 0.826 NK L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 9.37e-01 -0.00859 0.109 0.826 NK L1
ENSG00000185480 PARPBP -418362 sc-eQTL 3.28e-01 -0.125 0.128 0.826 NK L1
ENSG00000017427 IGF1 -779921 sc-eQTL 5.02e-01 0.0264 0.0393 0.827 Other_T L1
ENSG00000075188 NUP37 -418297 sc-eQTL 8.53e-01 0.0139 0.0749 0.827 Other_T L1
ENSG00000111666 CHPT1 4876 sc-eQTL 2.14e-01 -0.136 0.109 0.827 Other_T L1
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.56e-01 -0.0728 0.0788 0.827 Other_T L1
ENSG00000120800 UTP20 421718 sc-eQTL 4.45e-01 0.0943 0.123 0.827 Other_T L1
ENSG00000120805 ARL1 294051 sc-eQTL 8.48e-01 -0.0173 0.0899 0.827 Other_T L1
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.16e-02 -0.139 0.0793 0.827 Other_T L1
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.11e-01 -0.0788 0.0956 0.827 Other_T L1
ENSG00000185480 PARPBP -418362 sc-eQTL 1.61e-01 0.112 0.0794 0.827 Other_T L1
ENSG00000281344 HELLPAR -495762 sc-eQTL 1.17e-02 -0.233 0.0914 0.827 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -779921 sc-eQTL 2.61e-01 0.0283 0.0251 0.834 B_Activated L2
ENSG00000075188 NUP37 -418297 sc-eQTL 8.77e-01 0.0203 0.131 0.834 B_Activated L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.92e-01 0.102 0.0963 0.834 B_Activated L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 4.37e-01 -0.107 0.137 0.834 B_Activated L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.93e-01 0.0348 0.133 0.834 B_Activated L2
ENSG00000120805 ARL1 294051 sc-eQTL 3.81e-01 0.12 0.137 0.834 B_Activated L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.70e-01 0.0743 0.131 0.834 B_Activated L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.34e-01 0.197 0.13 0.834 B_Activated L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 6.97e-01 0.042 0.108 0.834 B_Activated L2
ENSG00000185480 PARPBP -418362 sc-eQTL 9.67e-01 0.00444 0.109 0.834 B_Activated L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 4.87e-01 0.071 0.102 0.834 B_Activated L2
ENSG00000017427 IGF1 -779921 sc-eQTL 4.82e-03 -0.145 0.0508 0.828 B_Intermediate L2
ENSG00000075188 NUP37 -418297 sc-eQTL 6.47e-01 -0.0591 0.129 0.828 B_Intermediate L2
ENSG00000111666 CHPT1 4876 sc-eQTL 9.96e-01 -0.000321 0.0692 0.828 B_Intermediate L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 4.53e-01 0.0768 0.102 0.828 B_Intermediate L2
ENSG00000120800 UTP20 421718 sc-eQTL 4.08e-01 -0.0942 0.114 0.828 B_Intermediate L2
ENSG00000120805 ARL1 294051 sc-eQTL 6.46e-01 0.0588 0.128 0.828 B_Intermediate L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.11e-01 0.0253 0.106 0.828 B_Intermediate L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.31e-01 0.11 0.113 0.828 B_Intermediate L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 1.64e-02 -0.285 0.118 0.828 B_Intermediate L2
ENSG00000185480 PARPBP -418362 sc-eQTL 4.55e-01 -0.0936 0.125 0.828 B_Intermediate L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 2.66e-01 0.134 0.12 0.828 B_Intermediate L2
ENSG00000017427 IGF1 -779921 sc-eQTL 9.20e-01 0.00482 0.0478 0.828 B_Memory L2
ENSG00000075188 NUP37 -418297 sc-eQTL 6.45e-01 -0.0582 0.126 0.828 B_Memory L2
ENSG00000111666 CHPT1 4876 sc-eQTL 4.38e-01 -0.064 0.0823 0.828 B_Memory L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 7.52e-01 -0.0357 0.113 0.828 B_Memory L2
ENSG00000120800 UTP20 421718 sc-eQTL 6.56e-01 0.0553 0.124 0.828 B_Memory L2
ENSG00000120805 ARL1 294051 sc-eQTL 5.41e-01 -0.0755 0.123 0.828 B_Memory L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.54e-01 0.0203 0.11 0.828 B_Memory L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 9.38e-01 0.00894 0.116 0.828 B_Memory L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 6.62e-01 0.0521 0.119 0.828 B_Memory L2
ENSG00000185480 PARPBP -418362 sc-eQTL 8.32e-01 -0.0259 0.122 0.828 B_Memory L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 8.47e-01 0.0214 0.111 0.828 B_Memory L2
ENSG00000017427 IGF1 -779921 sc-eQTL 6.77e-02 0.12 0.0656 0.827 B_Naive1 L2
ENSG00000075188 NUP37 -418297 sc-eQTL 3.11e-01 -0.121 0.119 0.827 B_Naive1 L2
ENSG00000111666 CHPT1 4876 sc-eQTL 3.94e-01 -0.053 0.062 0.827 B_Naive1 L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.43e-02 0.214 0.0867 0.827 B_Naive1 L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.53e-01 0.0329 0.104 0.827 B_Naive1 L2
ENSG00000120805 ARL1 294051 sc-eQTL 5.13e-01 -0.0762 0.116 0.827 B_Naive1 L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.17e-01 -0.0572 0.0881 0.827 B_Naive1 L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.04e-01 0.0982 0.0953 0.827 B_Naive1 L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 8.08e-01 -0.0316 0.13 0.827 B_Naive1 L2
ENSG00000185480 PARPBP -418362 sc-eQTL 2.28e-01 0.152 0.126 0.827 B_Naive1 L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 3.23e-01 -0.117 0.118 0.827 B_Naive1 L2
ENSG00000017427 IGF1 -779921 sc-eQTL 9.93e-01 0.000507 0.0581 0.826 B_Naive2 L2
ENSG00000075188 NUP37 -418297 sc-eQTL 7.47e-01 0.0385 0.119 0.826 B_Naive2 L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.34e-01 -0.0759 0.0636 0.826 B_Naive2 L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.34e-01 0.118 0.0985 0.826 B_Naive2 L2
ENSG00000120800 UTP20 421718 sc-eQTL 6.66e-01 0.0495 0.115 0.826 B_Naive2 L2
ENSG00000120805 ARL1 294051 sc-eQTL 4.35e-01 0.0982 0.126 0.826 B_Naive2 L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.92e-01 0.143 0.109 0.826 B_Naive2 L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.38e-01 -0.0843 0.108 0.826 B_Naive2 L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 5.83e-01 -0.0628 0.114 0.826 B_Naive2 L2
ENSG00000185480 PARPBP -418362 sc-eQTL 3.12e-01 0.133 0.131 0.826 B_Naive2 L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 3.93e-01 -0.097 0.113 0.826 B_Naive2 L2
ENSG00000075188 NUP37 -418297 sc-eQTL 8.81e-02 -0.215 0.126 0.823 CD4_CTL L2
ENSG00000111666 CHPT1 4876 sc-eQTL 7.19e-01 -0.0457 0.127 0.823 CD4_CTL L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.12e-01 0.138 0.11 0.823 CD4_CTL L2
ENSG00000120800 UTP20 421718 sc-eQTL 3.72e-01 0.109 0.122 0.823 CD4_CTL L2
ENSG00000120805 ARL1 294051 sc-eQTL 7.89e-01 0.0347 0.129 0.823 CD4_CTL L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 7.74e-01 0.0357 0.124 0.823 CD4_CTL L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.06e-02 -0.194 0.0941 0.827 CD4_Naive L2
ENSG00000111666 CHPT1 4876 sc-eQTL 3.41e-02 -0.231 0.108 0.827 CD4_Naive L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 7.05e-02 0.152 0.0839 0.827 CD4_Naive L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.42e-01 -0.0304 0.092 0.827 CD4_Naive L2
ENSG00000120805 ARL1 294051 sc-eQTL 5.97e-01 -0.0528 0.0997 0.827 CD4_Naive L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.44e-02 -0.17 0.0687 0.827 CD4_Naive L2
ENSG00000075188 NUP37 -418297 sc-eQTL 1.13e-02 -0.249 0.0974 0.827 CD4_TCM L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.45e-02 -0.255 0.113 0.827 CD4_TCM L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.11e-01 -0.0895 0.0881 0.827 CD4_TCM L2
ENSG00000120800 UTP20 421718 sc-eQTL 4.78e-01 -0.0784 0.11 0.827 CD4_TCM L2
ENSG00000120805 ARL1 294051 sc-eQTL 1.06e-01 -0.167 0.103 0.827 CD4_TCM L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 2.89e-01 -0.0719 0.0677 0.827 CD4_TCM L2
ENSG00000075188 NUP37 -418297 sc-eQTL 1.54e-01 -0.169 0.118 0.827 CD4_TEM L2
ENSG00000111666 CHPT1 4876 sc-eQTL 5.55e-02 -0.218 0.113 0.827 CD4_TEM L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.41e-01 0.129 0.11 0.827 CD4_TEM L2
ENSG00000120800 UTP20 421718 sc-eQTL 8.65e-01 0.0202 0.119 0.827 CD4_TEM L2
ENSG00000120805 ARL1 294051 sc-eQTL 4.58e-01 -0.0836 0.112 0.827 CD4_TEM L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.33e-01 0.151 0.1 0.827 CD4_TEM L2
ENSG00000075188 NUP37 -418297 sc-eQTL 9.93e-02 0.177 0.107 0.827 CD8_CTL L2
ENSG00000111666 CHPT1 4876 sc-eQTL 8.12e-02 -0.192 0.11 0.827 CD8_CTL L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 4.43e-01 -0.0679 0.0884 0.827 CD8_CTL L2
ENSG00000120800 UTP20 421718 sc-eQTL 1.58e-01 0.169 0.119 0.827 CD8_CTL L2
ENSG00000120805 ARL1 294051 sc-eQTL 9.18e-01 0.0122 0.118 0.827 CD8_CTL L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 8.93e-01 -0.0136 0.101 0.827 CD8_CTL L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 6.66e-01 0.0542 0.126 0.827 CD8_CTL L2
ENSG00000075188 NUP37 -418297 sc-eQTL 9.11e-01 0.0128 0.114 0.827 CD8_Naive L2
ENSG00000111666 CHPT1 4876 sc-eQTL 3.05e-02 -0.245 0.113 0.827 CD8_Naive L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.31e-02 0.217 0.101 0.827 CD8_Naive L2
ENSG00000120800 UTP20 421718 sc-eQTL 4.59e-01 -0.0805 0.109 0.827 CD8_Naive L2
ENSG00000120805 ARL1 294051 sc-eQTL 4.94e-01 -0.0807 0.118 0.827 CD8_Naive L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 7.59e-01 0.0238 0.0777 0.827 CD8_Naive L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.08e-01 0.0992 0.12 0.827 CD8_Naive L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.47e-01 0.0942 0.124 0.826 CD8_TCM L2
ENSG00000111666 CHPT1 4876 sc-eQTL 1.82e-02 -0.261 0.109 0.826 CD8_TCM L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.08e-01 0.144 0.114 0.826 CD8_TCM L2
ENSG00000120800 UTP20 421718 sc-eQTL 5.53e-01 0.0744 0.125 0.826 CD8_TCM L2
ENSG00000120805 ARL1 294051 sc-eQTL 8.17e-01 -0.0286 0.123 0.826 CD8_TCM L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.16e-01 -0.173 0.11 0.826 CD8_TCM L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 9.66e-01 0.00511 0.12 0.826 CD8_TCM L2
ENSG00000075188 NUP37 -418297 sc-eQTL 7.06e-02 0.223 0.122 0.833 CD8_TEM L2
ENSG00000111666 CHPT1 4876 sc-eQTL 1.13e-03 -0.376 0.114 0.833 CD8_TEM L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.41e-01 0.147 0.125 0.833 CD8_TEM L2
ENSG00000120800 UTP20 421718 sc-eQTL 8.15e-02 0.233 0.133 0.833 CD8_TEM L2
ENSG00000120805 ARL1 294051 sc-eQTL 4.46e-01 -0.0978 0.128 0.833 CD8_TEM L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 9.51e-01 0.00688 0.112 0.833 CD8_TEM L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.36e-01 -0.0964 0.123 0.833 CD8_TEM L2
ENSG00000017427 IGF1 -779921 sc-eQTL 4.58e-01 -0.0318 0.0428 0.829 MAIT L2
ENSG00000075188 NUP37 -418297 sc-eQTL 5.70e-01 -0.0683 0.12 0.829 MAIT L2
ENSG00000111666 CHPT1 4876 sc-eQTL 3.25e-02 -0.249 0.116 0.829 MAIT L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 7.01e-01 0.0398 0.104 0.829 MAIT L2
ENSG00000120800 UTP20 421718 sc-eQTL 2.89e-01 0.132 0.124 0.829 MAIT L2
ENSG00000120805 ARL1 294051 sc-eQTL 8.45e-01 0.0249 0.127 0.829 MAIT L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.16e-01 -0.165 0.105 0.829 MAIT L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 7.54e-01 0.0375 0.12 0.829 MAIT L2
ENSG00000185480 PARPBP -418362 sc-eQTL 4.06e-01 0.0975 0.117 0.829 MAIT L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 2.40e-01 -0.122 0.103 0.829 MAIT L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.68e-01 -0.0939 0.129 0.827 NK_CD56bright L2
ENSG00000111666 CHPT1 4876 sc-eQTL 4.84e-01 -0.0655 0.0936 0.827 NK_CD56bright L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 9.20e-01 0.0108 0.108 0.827 NK_CD56bright L2
ENSG00000120800 UTP20 421718 sc-eQTL 1.10e-01 -0.202 0.126 0.827 NK_CD56bright L2
ENSG00000120805 ARL1 294051 sc-eQTL 8.83e-01 0.0182 0.123 0.827 NK_CD56bright L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 4.64e-01 -0.0817 0.111 0.827 NK_CD56bright L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.61e-01 0.107 0.117 0.827 NK_CD56bright L2
ENSG00000185480 PARPBP -418362 sc-eQTL 1.11e-01 -0.197 0.123 0.827 NK_CD56bright L2
ENSG00000075188 NUP37 -418297 sc-eQTL 1.79e-01 0.152 0.113 0.825 NK_CD56dim L2
ENSG00000111666 CHPT1 4876 sc-eQTL 1.57e-02 -0.266 0.109 0.825 NK_CD56dim L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.31e-01 -0.126 0.0834 0.825 NK_CD56dim L2
ENSG00000120800 UTP20 421718 sc-eQTL 1.08e-01 0.187 0.116 0.825 NK_CD56dim L2
ENSG00000120805 ARL1 294051 sc-eQTL 2.92e-01 0.119 0.112 0.825 NK_CD56dim L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 6.83e-02 -0.175 0.0957 0.825 NK_CD56dim L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 6.82e-01 0.0481 0.117 0.825 NK_CD56dim L2
ENSG00000185480 PARPBP -418362 sc-eQTL 6.27e-01 0.0641 0.132 0.825 NK_CD56dim L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.86e-01 0.0831 0.119 0.824 NK_HLA L2
ENSG00000111666 CHPT1 4876 sc-eQTL 7.57e-02 -0.217 0.121 0.824 NK_HLA L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 9.98e-01 -0.000225 0.0984 0.824 NK_HLA L2
ENSG00000120800 UTP20 421718 sc-eQTL 8.93e-01 0.0173 0.129 0.824 NK_HLA L2
ENSG00000120805 ARL1 294051 sc-eQTL 1.00e-01 -0.216 0.131 0.824 NK_HLA L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.68e-01 0.0698 0.122 0.824 NK_HLA L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 7.74e-01 -0.0361 0.125 0.824 NK_HLA L2
ENSG00000185480 PARPBP -418362 sc-eQTL 9.79e-01 -0.00325 0.123 0.824 NK_HLA L2
ENSG00000075188 NUP37 -418297 sc-eQTL 5.20e-01 -0.074 0.115 0.825 NK_cytokine L2
ENSG00000111666 CHPT1 4876 sc-eQTL 9.84e-03 -0.275 0.106 0.825 NK_cytokine L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 6.93e-01 -0.0323 0.0816 0.825 NK_cytokine L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.84e-01 -0.0313 0.114 0.825 NK_cytokine L2
ENSG00000120805 ARL1 294051 sc-eQTL 1.58e-01 -0.161 0.114 0.825 NK_cytokine L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 7.69e-01 0.0265 0.0901 0.825 NK_cytokine L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.72e-01 -0.105 0.117 0.825 NK_cytokine L2
ENSG00000185480 PARPBP -418362 sc-eQTL 1.11e-02 -0.32 0.125 0.825 NK_cytokine L2
ENSG00000017427 IGF1 -779921 sc-eQTL 2.54e-01 -0.105 0.0915 0.837 PB L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.84e-02 0.243 0.122 0.837 PB L2
ENSG00000111666 CHPT1 4876 sc-eQTL 8.78e-01 -0.0147 0.0961 0.837 PB L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 5.55e-01 0.0817 0.138 0.837 PB L2
ENSG00000120800 UTP20 421718 sc-eQTL 5.03e-01 0.106 0.158 0.837 PB L2
ENSG00000120805 ARL1 294051 sc-eQTL 2.29e-01 0.117 0.0968 0.837 PB L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 9.37e-01 -0.00888 0.112 0.837 PB L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.62e-01 0.0841 0.114 0.837 PB L2
ENSG00000139351 SYCP3 -37649 sc-eQTL 2.11e-01 0.166 0.132 0.837 PB L2
ENSG00000185480 PARPBP -418362 sc-eQTL 2.69e-01 0.134 0.121 0.837 PB L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 2.89e-01 0.119 0.112 0.837 PB L2
ENSG00000017427 IGF1 -779921 sc-eQTL 3.85e-01 0.0374 0.043 0.826 Pro_T L2
ENSG00000075188 NUP37 -418297 sc-eQTL 6.23e-01 0.0428 0.0869 0.826 Pro_T L2
ENSG00000111666 CHPT1 4876 sc-eQTL 3.28e-01 -0.113 0.115 0.826 Pro_T L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.61e-01 -0.119 0.0848 0.826 Pro_T L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.21e-01 0.0435 0.122 0.826 Pro_T L2
ENSG00000120805 ARL1 294051 sc-eQTL 7.87e-01 -0.0248 0.092 0.826 Pro_T L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 2.14e-01 -0.124 0.0997 0.826 Pro_T L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 4.37e-01 -0.0667 0.0856 0.826 Pro_T L2
ENSG00000185480 PARPBP -418362 sc-eQTL 7.10e-01 0.0296 0.0795 0.826 Pro_T L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 1.13e-01 -0.138 0.0864 0.826 Pro_T L2
ENSG00000075188 NUP37 -418297 sc-eQTL 3.12e-02 -0.262 0.121 0.827 Treg L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.36e-01 -0.15 0.127 0.827 Treg L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.99e-01 0.0938 0.111 0.827 Treg L2
ENSG00000120800 UTP20 421718 sc-eQTL 9.62e-01 -0.00574 0.121 0.827 Treg L2
ENSG00000120805 ARL1 294051 sc-eQTL 7.49e-01 0.0401 0.125 0.827 Treg L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 2.60e-01 -0.114 0.101 0.827 Treg L2
ENSG00000075188 NUP37 -418297 sc-eQTL 1.13e-01 -0.176 0.111 0.827 cDC L2
ENSG00000111666 CHPT1 4876 sc-eQTL 9.58e-01 0.00571 0.109 0.827 cDC L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.22e-01 0.171 0.139 0.827 cDC L2
ENSG00000120800 UTP20 421718 sc-eQTL 9.73e-01 -0.00425 0.127 0.827 cDC L2
ENSG00000120805 ARL1 294051 sc-eQTL 5.14e-01 0.086 0.131 0.827 cDC L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.27e-01 0.0783 0.123 0.827 cDC L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 5.31e-01 -0.0603 0.0962 0.827 cDC L2
ENSG00000185480 PARPBP -418362 sc-eQTL 1.45e-01 -0.16 0.109 0.827 cDC L2
ENSG00000075188 NUP37 -418297 sc-eQTL 6.36e-01 -0.0515 0.109 0.827 cMono_IL1B L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.57e-02 -0.182 0.0811 0.827 cMono_IL1B L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 6.66e-01 0.047 0.109 0.827 cMono_IL1B L2
ENSG00000120800 UTP20 421718 sc-eQTL 1.60e-02 -0.293 0.121 0.827 cMono_IL1B L2
ENSG00000120805 ARL1 294051 sc-eQTL 2.35e-01 0.13 0.109 0.827 cMono_IL1B L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.11e-01 -0.151 0.094 0.827 cMono_IL1B L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.33e-01 0.121 0.0802 0.827 cMono_IL1B L2
ENSG00000075188 NUP37 -418297 sc-eQTL 4.78e-01 -0.0843 0.118 0.827 cMono_S100A L2
ENSG00000111666 CHPT1 4876 sc-eQTL 6.48e-01 -0.0415 0.0909 0.827 cMono_S100A L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 1.81e-01 0.148 0.11 0.827 cMono_S100A L2
ENSG00000120800 UTP20 421718 sc-eQTL 9.46e-01 -0.00872 0.13 0.827 cMono_S100A L2
ENSG00000120805 ARL1 294051 sc-eQTL 1.98e-01 -0.157 0.121 0.827 cMono_S100A L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 4.90e-01 0.0777 0.112 0.827 cMono_S100A L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 2.30e-01 0.105 0.0874 0.827 cMono_S100A L2
ENSG00000075188 NUP37 -418297 sc-eQTL 9.68e-01 -0.00607 0.152 0.827 gdT L2
ENSG00000111666 CHPT1 4876 sc-eQTL 2.87e-01 -0.151 0.142 0.827 gdT L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.63e-01 -0.0975 0.107 0.827 gdT L2
ENSG00000120800 UTP20 421718 sc-eQTL 9.62e-01 -0.0068 0.141 0.827 gdT L2
ENSG00000120805 ARL1 294051 sc-eQTL 7.25e-01 -0.0522 0.148 0.827 gdT L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 3.70e-01 -0.124 0.138 0.827 gdT L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 9.32e-01 -0.012 0.141 0.827 gdT L2
ENSG00000185480 PARPBP -418362 sc-eQTL 9.43e-01 0.00986 0.138 0.827 gdT L2
ENSG00000281344 HELLPAR -495762 sc-eQTL 3.74e-01 -0.112 0.126 0.827 gdT L2
ENSG00000075188 NUP37 -418297 sc-eQTL 8.58e-01 -0.0214 0.119 0.827 intMono L2
ENSG00000111666 CHPT1 4876 sc-eQTL 8.34e-02 -0.188 0.108 0.827 intMono L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.84e-01 0.137 0.128 0.827 intMono L2
ENSG00000120800 UTP20 421718 sc-eQTL 3.84e-01 0.105 0.12 0.827 intMono L2
ENSG00000120805 ARL1 294051 sc-eQTL 1.19e-01 -0.193 0.123 0.827 intMono L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 1.37e-01 -0.178 0.119 0.827 intMono L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.92e-01 0.0899 0.105 0.827 intMono L2
ENSG00000075188 NUP37 -418297 sc-eQTL 5.06e-01 -0.0783 0.117 0.826 ncMono L2
ENSG00000111666 CHPT1 4876 sc-eQTL 1.65e-03 -0.338 0.106 0.826 ncMono L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 9.20e-01 -0.013 0.13 0.826 ncMono L2
ENSG00000120800 UTP20 421718 sc-eQTL 3.71e-01 -0.102 0.113 0.826 ncMono L2
ENSG00000120805 ARL1 294051 sc-eQTL 3.90e-01 -0.0939 0.109 0.826 ncMono L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 9.23e-01 0.0102 0.105 0.826 ncMono L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.36e-01 0.146 0.0973 0.826 ncMono L2
ENSG00000075188 NUP37 -418297 sc-eQTL 7.09e-01 0.0562 0.151 0.833 pDC L2
ENSG00000111666 CHPT1 4876 sc-eQTL 1.19e-01 -0.204 0.13 0.833 pDC L2
ENSG00000111670 GNPTAB -129136 sc-eQTL 5.15e-01 -0.0906 0.139 0.833 pDC L2
ENSG00000120800 UTP20 421718 sc-eQTL 7.39e-01 -0.0461 0.138 0.833 pDC L2
ENSG00000120805 ARL1 294051 sc-eQTL 5.21e-01 0.0935 0.145 0.833 pDC L2
ENSG00000120860 WASHC3 -360326 sc-eQTL 3.64e-01 -0.115 0.127 0.833 pDC L2
ENSG00000136048 DRAM1 -175757 sc-eQTL 3.53e-01 -0.0912 0.0978 0.833 pDC L2
ENSG00000185480 PARPBP -418362 sc-eQTL 6.86e-01 0.0527 0.13 0.833 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -779921 sc-eQTL 7.50e-02 -0.107 0.0598 0.827 B_Memory LOneK1K
ENSG00000075188 NUP37 -418297 sc-eQTL 7.41e-01 -0.04 0.121 0.827 B_Memory LOneK1K
ENSG00000111666 CHPT1 4876 sc-eQTL 4.88e-01 -0.0442 0.0636 0.827 B_Memory LOneK1K
ENSG00000111670 GNPTAB -129136 sc-eQTL 9.37e-01 0.00796 0.1 0.827 B_Memory LOneK1K
ENSG00000120800 UTP20 421718 sc-eQTL 7.34e-01 0.0351 0.103 0.827 B_Memory LOneK1K
ENSG00000120805 ARL1 294051 sc-eQTL 8.53e-01 0.0216 0.116 0.827 B_Memory LOneK1K
ENSG00000120860 WASHC3 -360326 sc-eQTL 7.72e-01 0.0252 0.087 0.827 B_Memory LOneK1K
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.08e-01 0.167 0.104 0.827 B_Memory LOneK1K
ENSG00000139351 SYCP3 -37649 sc-eQTL 1.08e-01 -0.192 0.119 0.827 B_Memory LOneK1K
ENSG00000185480 PARPBP -418362 sc-eQTL 3.80e-01 -0.11 0.125 0.827 B_Memory LOneK1K
ENSG00000281344 HELLPAR -495762 sc-eQTL 1.18e-01 0.194 0.124 0.827 B_Memory LOneK1K
ENSG00000017427 IGF1 -779921 sc-eQTL 1.01e-01 0.114 0.0691 0.827 B_Naive LOneK1K
ENSG00000075188 NUP37 -418297 sc-eQTL 7.98e-01 -0.0292 0.114 0.827 B_Naive LOneK1K
ENSG00000111666 CHPT1 4876 sc-eQTL 3.50e-01 -0.0526 0.0561 0.827 B_Naive LOneK1K
ENSG00000111670 GNPTAB -129136 sc-eQTL 3.26e-02 0.171 0.0796 0.827 B_Naive LOneK1K
ENSG00000120800 UTP20 421718 sc-eQTL 4.94e-01 0.0674 0.0984 0.827 B_Naive LOneK1K
ENSG00000120805 ARL1 294051 sc-eQTL 8.06e-01 -0.0277 0.112 0.827 B_Naive LOneK1K
ENSG00000120860 WASHC3 -360326 sc-eQTL 9.57e-01 -0.00452 0.0842 0.827 B_Naive LOneK1K
ENSG00000136048 DRAM1 -175757 sc-eQTL 7.30e-01 0.0304 0.0882 0.827 B_Naive LOneK1K
ENSG00000139351 SYCP3 -37649 sc-eQTL 3.25e-01 -0.125 0.127 0.827 B_Naive LOneK1K
ENSG00000185480 PARPBP -418362 sc-eQTL 1.42e-01 0.19 0.129 0.827 B_Naive LOneK1K
ENSG00000281344 HELLPAR -495762 sc-eQTL 3.26e-01 -0.116 0.118 0.827 B_Naive LOneK1K
ENSG00000075188 NUP37 -418297 sc-eQTL 5.46e-01 -0.0603 0.0997 0.827 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 4876 sc-eQTL 8.98e-02 -0.137 0.0801 0.827 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -129136 sc-eQTL 4.57e-01 0.0773 0.104 0.827 CD14_Mono LOneK1K
ENSG00000120800 UTP20 421718 sc-eQTL 2.69e-01 -0.136 0.122 0.827 CD14_Mono LOneK1K
ENSG00000120805 ARL1 294051 sc-eQTL 5.56e-01 0.0619 0.105 0.827 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -360326 sc-eQTL 2.07e-01 -0.115 0.091 0.827 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.27e-01 0.114 0.0745 0.827 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -418297 sc-eQTL 8.66e-01 -0.0194 0.115 0.828 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 4876 sc-eQTL 3.61e-03 -0.29 0.0984 0.828 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.77e-01 0.132 0.121 0.828 CD16_Mono LOneK1K
ENSG00000120800 UTP20 421718 sc-eQTL 7.15e-01 -0.0427 0.117 0.828 CD16_Mono LOneK1K
ENSG00000120805 ARL1 294051 sc-eQTL 1.77e-02 -0.274 0.115 0.828 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -360326 sc-eQTL 5.93e-01 -0.0539 0.101 0.828 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -175757 sc-eQTL 1.54e-01 0.124 0.0866 0.828 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -418297 sc-eQTL 5.00e-01 0.0731 0.108 0.825 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 4876 sc-eQTL 3.20e-03 -0.309 0.103 0.825 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -129136 sc-eQTL 2.78e-01 -0.0784 0.0721 0.825 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 421718 sc-eQTL 2.12e-01 0.138 0.111 0.825 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 294051 sc-eQTL 8.49e-01 -0.0196 0.103 0.825 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -360326 sc-eQTL 3.87e-01 -0.0722 0.0833 0.825 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -175757 sc-eQTL 7.41e-01 -0.037 0.112 0.825 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -418362 sc-eQTL 4.62e-01 -0.097 0.132 0.825 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 4876 eQTL 1.75e-04 -0.135 0.0359 0.0 0.0 0.145
ENSG00000136048 DRAM1 -175757 eQTL 1.83e-06 0.0964 0.0201 0.0 0.0 0.145
ENSG00000139351 SYCP3 -37646 eQTL 0.00162 0.161 0.0511 0.0 0.00299 0.145

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 4876 3.63e-05 3.34e-05 6.31e-06 1.55e-05 5.76e-06 1.44e-05 4.51e-05 4.46e-06 3.11e-05 1.55e-05 3.84e-05 1.72e-05 4.85e-05 1.4e-05 7.03e-06 1.9e-05 1.73e-05 2.52e-05 7.91e-06 6.6e-06 1.5e-05 3.3e-05 3.27e-05 8.98e-06 4.44e-05 7.81e-06 1.42e-05 1.29e-05 3.26e-05 2.53e-05 2.03e-05 1.61e-06 2.59e-06 7.07e-06 1.15e-05 5.77e-06 3.09e-06 3.16e-06 4.54e-06 3.3e-06 1.73e-06 3.89e-05 3.5e-06 3.59e-07 2.45e-06 3.9e-06 4.07e-06 1.6e-06 1.51e-06
ENSG00000136048 DRAM1 -175757 1.28e-06 1.36e-06 3.51e-07 9.2e-07 4.93e-07 4.76e-07 1.43e-06 4.08e-07 1.4e-06 6.28e-07 2.06e-06 8.37e-07 2.41e-06 4.82e-07 5.65e-07 9.62e-07 1.1e-06 1.13e-06 7.34e-07 5.15e-07 7.69e-07 1.82e-06 1.11e-06 5.47e-07 2.31e-06 7.54e-07 1.02e-06 8.57e-07 1.6e-06 1.32e-06 8.51e-07 2.83e-07 2.86e-07 6.44e-07 3.98e-07 4.75e-07 7.24e-07 2.92e-07 5.01e-07 2.03e-07 1.45e-07 1.88e-06 6.22e-07 1.84e-07 3.47e-07 1.71e-07 2.37e-07 6.95e-08 1.91e-07