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Genes within 1Mb (chr12:101694759:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -786985 sc-eQTL 5.24e-01 0.0244 0.0381 0.382 B L1
ENSG00000075188 NUP37 -425361 sc-eQTL 9.31e-01 -0.00573 0.0664 0.382 B L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.20e-13 0.279 0.0355 0.382 B L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.13e-04 -0.204 0.0567 0.382 B L1
ENSG00000120800 UTP20 414654 sc-eQTL 8.23e-01 -0.0149 0.0664 0.382 B L1
ENSG00000120805 ARL1 286987 sc-eQTL 1.47e-01 -0.0827 0.0568 0.382 B L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 2.75e-02 0.1 0.0452 0.382 B L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.39e-05 -0.221 0.0496 0.382 B L1
ENSG00000139351 SYCP3 -44713 sc-eQTL 1.32e-03 0.262 0.0804 0.382 B L1
ENSG00000185480 PARPBP -425426 sc-eQTL 1.50e-01 -0.113 0.0785 0.382 B L1
ENSG00000281344 HELLPAR -502826 sc-eQTL 7.92e-01 0.0194 0.0735 0.382 B L1
ENSG00000075188 NUP37 -425361 sc-eQTL 4.88e-01 0.0418 0.0601 0.382 CD4T L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.93e-64 1.02 0.0413 0.382 CD4T L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.98e-12 -0.372 0.0502 0.382 CD4T L1
ENSG00000120800 UTP20 414654 sc-eQTL 7.73e-01 -0.018 0.0623 0.382 CD4T L1
ENSG00000120805 ARL1 286987 sc-eQTL 5.66e-01 0.035 0.0609 0.382 CD4T L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.20e-01 0.0663 0.0424 0.382 CD4T L1
ENSG00000075188 NUP37 -425361 sc-eQTL 3.62e-01 -0.0682 0.0746 0.382 CD8T L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.40e-49 0.946 0.0481 0.382 CD8T L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 5.07e-03 -0.148 0.0522 0.382 CD8T L1
ENSG00000120800 UTP20 414654 sc-eQTL 7.27e-01 0.0235 0.0671 0.382 CD8T L1
ENSG00000120805 ARL1 286987 sc-eQTL 6.61e-01 -0.0325 0.074 0.382 CD8T L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.24e-01 0.0519 0.0525 0.382 CD8T L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 6.71e-01 -0.0321 0.0753 0.382 CD8T L1
ENSG00000075188 NUP37 -425361 sc-eQTL 1.37e-01 -0.122 0.0817 0.381 DC L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.29e-05 0.32 0.0716 0.381 DC L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.23e-02 -0.188 0.0815 0.381 DC L1
ENSG00000120800 UTP20 414654 sc-eQTL 9.08e-02 -0.149 0.0879 0.381 DC L1
ENSG00000120805 ARL1 286987 sc-eQTL 7.43e-01 -0.03 0.0916 0.381 DC L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 6.13e-01 -0.0399 0.0788 0.381 DC L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.70e-01 0.0584 0.065 0.381 DC L1
ENSG00000185480 PARPBP -425426 sc-eQTL 3.66e-01 -0.0776 0.0856 0.381 DC L1
ENSG00000075188 NUP37 -425361 sc-eQTL 4.57e-01 0.052 0.0697 0.382 Mono L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 4.21e-14 0.418 0.0516 0.382 Mono L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.84e-01 0.0793 0.0739 0.382 Mono L1
ENSG00000120800 UTP20 414654 sc-eQTL 3.93e-02 -0.17 0.0818 0.382 Mono L1
ENSG00000120805 ARL1 286987 sc-eQTL 4.01e-02 -0.156 0.0753 0.382 Mono L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 4.17e-01 0.0544 0.0668 0.382 Mono L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.35e-02 -0.11 0.054 0.382 Mono L1
ENSG00000075188 NUP37 -425361 sc-eQTL 2.66e-01 -0.0833 0.0747 0.384 NK L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.34e-38 0.749 0.0465 0.384 NK L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.82e-01 -0.0355 0.0503 0.384 NK L1
ENSG00000120800 UTP20 414654 sc-eQTL 9.45e-01 0.00563 0.0811 0.384 NK L1
ENSG00000120805 ARL1 286987 sc-eQTL 1.11e-01 -0.119 0.0741 0.384 NK L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.95e-03 0.161 0.0551 0.384 NK L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.36e-01 -0.119 0.0795 0.384 NK L1
ENSG00000185480 PARPBP -425426 sc-eQTL 7.19e-01 -0.0338 0.0938 0.384 NK L1
ENSG00000017427 IGF1 -786985 sc-eQTL 8.90e-01 -0.00394 0.0285 0.382 Other_T L1
ENSG00000075188 NUP37 -425361 sc-eQTL 3.84e-01 0.0474 0.0543 0.382 Other_T L1
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.61e-25 0.733 0.0613 0.382 Other_T L1
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.16e-02 -0.144 0.0564 0.382 Other_T L1
ENSG00000120800 UTP20 414654 sc-eQTL 3.31e-01 0.0869 0.0893 0.382 Other_T L1
ENSG00000120805 ARL1 286987 sc-eQTL 7.34e-01 -0.0222 0.0652 0.382 Other_T L1
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.07e-01 -0.0592 0.0578 0.382 Other_T L1
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.38e-01 -0.103 0.0692 0.382 Other_T L1
ENSG00000185480 PARPBP -425426 sc-eQTL 3.40e-01 0.0553 0.0578 0.382 Other_T L1
ENSG00000281344 HELLPAR -502826 sc-eQTL 6.91e-01 0.0268 0.0674 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -786985 sc-eQTL 4.54e-01 0.0134 0.0178 0.375 B_Activated L2
ENSG00000075188 NUP37 -425361 sc-eQTL 4.38e-01 -0.0718 0.0924 0.375 B_Activated L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 7.90e-04 0.226 0.0662 0.375 B_Activated L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.34e-02 -0.219 0.0957 0.375 B_Activated L2
ENSG00000120800 UTP20 414654 sc-eQTL 3.99e-01 0.0793 0.0938 0.375 B_Activated L2
ENSG00000120805 ARL1 286987 sc-eQTL 5.11e-01 0.0638 0.097 0.375 B_Activated L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 6.04e-01 -0.048 0.0924 0.375 B_Activated L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 7.33e-02 -0.166 0.092 0.375 B_Activated L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 4.44e-01 0.0584 0.0762 0.375 B_Activated L2
ENSG00000185480 PARPBP -425426 sc-eQTL 3.07e-01 -0.0785 0.0766 0.375 B_Activated L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 4.48e-01 -0.0548 0.072 0.375 B_Activated L2
ENSG00000017427 IGF1 -786985 sc-eQTL 5.05e-01 0.0252 0.0377 0.382 B_Intermediate L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.81e-01 -0.0141 0.0939 0.382 B_Intermediate L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 3.17e-04 0.179 0.0489 0.382 B_Intermediate L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.44e-01 -0.109 0.0741 0.382 B_Intermediate L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.70e-01 0.0471 0.0827 0.382 B_Intermediate L2
ENSG00000120805 ARL1 286987 sc-eQTL 3.24e-02 -0.199 0.0922 0.382 B_Intermediate L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 5.95e-01 0.041 0.077 0.382 B_Intermediate L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.30e-02 -0.204 0.0814 0.382 B_Intermediate L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 5.64e-03 0.239 0.0853 0.382 B_Intermediate L2
ENSG00000185480 PARPBP -425426 sc-eQTL 9.09e-02 -0.154 0.0906 0.382 B_Intermediate L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 9.14e-01 0.00941 0.0874 0.382 B_Intermediate L2
ENSG00000017427 IGF1 -786985 sc-eQTL 2.71e-01 0.0376 0.0341 0.384 B_Memory L2
ENSG00000075188 NUP37 -425361 sc-eQTL 9.24e-01 -0.00867 0.0904 0.384 B_Memory L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 4.30e-12 0.387 0.0526 0.384 B_Memory L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 7.21e-01 -0.0289 0.0808 0.384 B_Memory L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.11e-01 -0.111 0.0884 0.384 B_Memory L2
ENSG00000120805 ARL1 286987 sc-eQTL 4.08e-01 -0.073 0.0881 0.384 B_Memory L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.14e-01 0.0795 0.0787 0.384 B_Memory L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 2.87e-01 -0.088 0.0825 0.384 B_Memory L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 1.27e-01 0.13 0.0847 0.384 B_Memory L2
ENSG00000185480 PARPBP -425426 sc-eQTL 6.65e-01 -0.0377 0.0871 0.384 B_Memory L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 6.05e-01 0.041 0.0793 0.384 B_Memory L2
ENSG00000017427 IGF1 -786985 sc-eQTL 9.65e-01 -0.0021 0.0477 0.382 B_Naive1 L2
ENSG00000075188 NUP37 -425361 sc-eQTL 5.28e-01 0.0545 0.0862 0.382 B_Naive1 L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.57e-08 0.236 0.0418 0.382 B_Naive1 L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.45e-03 -0.179 0.0622 0.382 B_Naive1 L2
ENSG00000120800 UTP20 414654 sc-eQTL 6.23e-01 0.0371 0.0753 0.382 B_Naive1 L2
ENSG00000120805 ARL1 286987 sc-eQTL 7.45e-01 -0.0274 0.084 0.382 B_Naive1 L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.49e-01 0.0918 0.0633 0.382 B_Naive1 L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 8.55e-02 -0.118 0.0685 0.382 B_Naive1 L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 5.60e-02 0.178 0.0928 0.382 B_Naive1 L2
ENSG00000185480 PARPBP -425426 sc-eQTL 9.14e-01 -0.00991 0.0911 0.382 B_Naive1 L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 1.78e-01 0.115 0.085 0.382 B_Naive1 L2
ENSG00000017427 IGF1 -786985 sc-eQTL 5.99e-01 0.022 0.0417 0.384 B_Naive2 L2
ENSG00000075188 NUP37 -425361 sc-eQTL 7.83e-01 0.0235 0.0855 0.384 B_Naive2 L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.38e-05 0.182 0.044 0.384 B_Naive2 L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.93e-02 -0.165 0.07 0.384 B_Naive2 L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.86e-02 0.155 0.0816 0.384 B_Naive2 L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.17e-01 -0.021 0.0903 0.384 B_Naive2 L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 9.14e-01 0.0085 0.0786 0.384 B_Naive2 L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 2.58e-02 -0.173 0.077 0.384 B_Naive2 L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 5.42e-01 0.05 0.0819 0.384 B_Naive2 L2
ENSG00000185480 PARPBP -425426 sc-eQTL 1.42e-01 -0.139 0.0941 0.384 B_Naive2 L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 1.14e-01 -0.128 0.081 0.384 B_Naive2 L2
ENSG00000075188 NUP37 -425361 sc-eQTL 6.32e-01 -0.044 0.0919 0.384 CD4_CTL L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 9.75e-16 0.684 0.0782 0.384 CD4_CTL L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.21e-01 -0.0985 0.0802 0.384 CD4_CTL L2
ENSG00000120800 UTP20 414654 sc-eQTL 8.14e-01 0.0209 0.0885 0.384 CD4_CTL L2
ENSG00000120805 ARL1 286987 sc-eQTL 9.96e-01 0.000469 0.0938 0.384 CD4_CTL L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.43e-01 -0.132 0.0895 0.384 CD4_CTL L2
ENSG00000075188 NUP37 -425361 sc-eQTL 4.97e-01 0.0474 0.0698 0.382 CD4_Naive L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.51e-59 0.987 0.0432 0.382 CD4_Naive L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.19e-12 -0.409 0.0553 0.382 CD4_Naive L2
ENSG00000120800 UTP20 414654 sc-eQTL 9.95e-01 0.000416 0.0676 0.382 CD4_Naive L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.00e-01 0.0186 0.0733 0.382 CD4_Naive L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.50e-01 0.0736 0.051 0.382 CD4_Naive L2
ENSG00000075188 NUP37 -425361 sc-eQTL 7.85e-01 -0.02 0.0731 0.382 CD4_TCM L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.27e-62 1.05 0.0435 0.382 CD4_TCM L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.39e-04 -0.245 0.0631 0.382 CD4_TCM L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.29e-01 0.0515 0.0816 0.382 CD4_TCM L2
ENSG00000120805 ARL1 286987 sc-eQTL 4.71e-01 0.0552 0.0764 0.382 CD4_TCM L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.73e-01 0.0683 0.05 0.382 CD4_TCM L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.60e-01 -0.0154 0.0873 0.382 CD4_TEM L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 4.39e-41 0.926 0.0548 0.382 CD4_TEM L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.64e-03 -0.233 0.0793 0.382 CD4_TEM L2
ENSG00000120800 UTP20 414654 sc-eQTL 8.92e-01 0.0119 0.0876 0.382 CD4_TEM L2
ENSG00000120805 ARL1 286987 sc-eQTL 5.43e-01 0.0504 0.0827 0.382 CD4_TEM L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 7.58e-01 -0.0228 0.0741 0.382 CD4_TEM L2
ENSG00000075188 NUP37 -425361 sc-eQTL 5.69e-01 -0.0449 0.0786 0.382 CD8_CTL L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.32e-26 0.758 0.0615 0.382 CD8_CTL L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.54e-01 -0.0736 0.0643 0.382 CD8_CTL L2
ENSG00000120800 UTP20 414654 sc-eQTL 6.35e-01 0.0415 0.0872 0.382 CD8_CTL L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.98e-01 -0.0111 0.0863 0.382 CD8_CTL L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 4.03e-01 0.0616 0.0735 0.382 CD8_CTL L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.42e-01 -0.0705 0.0914 0.382 CD8_CTL L2
ENSG00000075188 NUP37 -425361 sc-eQTL 6.90e-01 0.0337 0.0845 0.382 CD8_Naive L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.82e-40 0.919 0.0552 0.382 CD8_Naive L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.38e-05 -0.321 0.0721 0.382 CD8_Naive L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.66e-01 -0.0892 0.08 0.382 CD8_Naive L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.38e-01 -0.0178 0.0871 0.382 CD8_Naive L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.44e-01 -0.0543 0.0572 0.382 CD8_Naive L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.98e-01 -0.0749 0.0884 0.382 CD8_Naive L2
ENSG00000075188 NUP37 -425361 sc-eQTL 1.16e-01 -0.142 0.0901 0.382 CD8_TCM L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.49e-17 0.624 0.0678 0.382 CD8_TCM L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.81e-02 -0.184 0.0831 0.382 CD8_TCM L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.65e-01 0.0528 0.0917 0.382 CD8_TCM L2
ENSG00000120805 ARL1 286987 sc-eQTL 5.93e-02 -0.169 0.0893 0.382 CD8_TCM L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 8.65e-03 0.21 0.0793 0.382 CD8_TCM L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.21e-01 -0.0709 0.0878 0.382 CD8_TCM L2
ENSG00000075188 NUP37 -425361 sc-eQTL 2.31e-01 -0.108 0.0895 0.388 CD8_TEM L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.50e-14 0.596 0.0735 0.388 CD8_TEM L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.35e-01 -0.108 0.0906 0.388 CD8_TEM L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.58e-01 0.0572 0.0975 0.388 CD8_TEM L2
ENSG00000120805 ARL1 286987 sc-eQTL 1.92e-01 0.122 0.0929 0.388 CD8_TEM L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 5.88e-01 0.0443 0.0815 0.388 CD8_TEM L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 5.83e-01 0.0495 0.0899 0.388 CD8_TEM L2
ENSG00000017427 IGF1 -786985 sc-eQTL 2.55e-01 -0.0356 0.0312 0.383 MAIT L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.49e-01 0.0168 0.0879 0.383 MAIT L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.71e-20 0.72 0.0696 0.383 MAIT L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.66e-02 -0.158 0.0752 0.383 MAIT L2
ENSG00000120800 UTP20 414654 sc-eQTL 6.64e-01 0.0395 0.091 0.383 MAIT L2
ENSG00000120805 ARL1 286987 sc-eQTL 2.44e-01 0.108 0.0926 0.383 MAIT L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 2.09e-01 0.0969 0.0769 0.383 MAIT L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.53e-02 -0.184 0.0867 0.383 MAIT L2
ENSG00000185480 PARPBP -425426 sc-eQTL 4.91e-01 -0.0591 0.0857 0.383 MAIT L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 8.62e-01 -0.0133 0.076 0.383 MAIT L2
ENSG00000075188 NUP37 -425361 sc-eQTL 2.20e-01 -0.119 0.0966 0.382 NK_CD56bright L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.81e-09 0.4 0.0643 0.382 NK_CD56bright L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 9.24e-01 0.00775 0.081 0.382 NK_CD56bright L2
ENSG00000120800 UTP20 414654 sc-eQTL 3.40e-01 -0.0903 0.0944 0.382 NK_CD56bright L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.12e-01 -0.0221 0.0925 0.382 NK_CD56bright L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 7.91e-01 -0.0222 0.0836 0.382 NK_CD56bright L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 7.31e-01 -0.0303 0.0879 0.382 NK_CD56bright L2
ENSG00000185480 PARPBP -425426 sc-eQTL 2.23e-01 0.113 0.0925 0.382 NK_CD56bright L2
ENSG00000075188 NUP37 -425361 sc-eQTL 6.90e-01 -0.033 0.0826 0.386 NK_CD56dim L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 9.28e-33 0.82 0.0574 0.386 NK_CD56dim L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 7.72e-01 -0.0177 0.061 0.386 NK_CD56dim L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.38e-01 -0.0999 0.0845 0.386 NK_CD56dim L2
ENSG00000120805 ARL1 286987 sc-eQTL 1.71e-01 -0.112 0.0816 0.386 NK_CD56dim L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.79e-01 0.0943 0.0699 0.386 NK_CD56dim L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.43e-01 -0.125 0.0848 0.386 NK_CD56dim L2
ENSG00000185480 PARPBP -425426 sc-eQTL 4.12e-01 -0.0789 0.0958 0.386 NK_CD56dim L2
ENSG00000075188 NUP37 -425361 sc-eQTL 5.22e-01 -0.0551 0.0857 0.384 NK_HLA L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 6.28e-11 0.546 0.0789 0.384 NK_HLA L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 9.69e-01 0.00273 0.0708 0.384 NK_HLA L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.32e-01 0.11 0.0922 0.384 NK_HLA L2
ENSG00000120805 ARL1 286987 sc-eQTL 4.52e-01 0.0712 0.0944 0.384 NK_HLA L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 8.61e-01 -0.0154 0.0878 0.384 NK_HLA L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.83e-01 -0.0633 0.0901 0.384 NK_HLA L2
ENSG00000185480 PARPBP -425426 sc-eQTL 9.11e-01 -0.00991 0.0887 0.384 NK_HLA L2
ENSG00000075188 NUP37 -425361 sc-eQTL 6.76e-01 0.0355 0.0847 0.386 NK_cytokine L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.81e-26 0.74 0.0605 0.386 NK_cytokine L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.54e-01 -0.0857 0.0599 0.386 NK_cytokine L2
ENSG00000120800 UTP20 414654 sc-eQTL 3.80e-01 0.0738 0.0838 0.386 NK_cytokine L2
ENSG00000120805 ARL1 286987 sc-eQTL 2.28e-01 -0.102 0.0842 0.386 NK_cytokine L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 4.08e-03 0.189 0.0652 0.386 NK_cytokine L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.43e-01 -0.0665 0.0865 0.386 NK_cytokine L2
ENSG00000185480 PARPBP -425426 sc-eQTL 6.05e-01 0.0484 0.0935 0.386 NK_cytokine L2
ENSG00000017427 IGF1 -786985 sc-eQTL 7.71e-01 0.0196 0.0672 0.37 PB L2
ENSG00000075188 NUP37 -425361 sc-eQTL 9.42e-01 0.00661 0.0905 0.37 PB L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.07e-01 0.113 0.0693 0.37 PB L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.56e-01 -0.0753 0.101 0.37 PB L2
ENSG00000120800 UTP20 414654 sc-eQTL 9.24e-02 -0.194 0.114 0.37 PB L2
ENSG00000120805 ARL1 286987 sc-eQTL 7.87e-01 -0.0193 0.0712 0.37 PB L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 4.75e-01 0.0588 0.082 0.37 PB L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 9.72e-02 -0.138 0.0823 0.37 PB L2
ENSG00000139351 SYCP3 -44713 sc-eQTL 2.08e-01 0.122 0.0961 0.37 PB L2
ENSG00000185480 PARPBP -425426 sc-eQTL 9.12e-01 0.00983 0.0887 0.37 PB L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 4.37e-01 -0.0639 0.0819 0.37 PB L2
ENSG00000017427 IGF1 -786985 sc-eQTL 8.68e-01 -0.00514 0.0309 0.385 Pro_T L2
ENSG00000075188 NUP37 -425361 sc-eQTL 5.51e-01 0.0372 0.0622 0.385 Pro_T L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 3.18e-08 0.441 0.0767 0.385 Pro_T L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 8.65e-02 -0.104 0.0606 0.385 Pro_T L2
ENSG00000120800 UTP20 414654 sc-eQTL 4.13e-01 0.0714 0.0871 0.385 Pro_T L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.82e-02 -0.112 0.0655 0.385 Pro_T L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 5.63e-02 -0.136 0.0711 0.385 Pro_T L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.20e-01 -0.0611 0.0613 0.385 Pro_T L2
ENSG00000185480 PARPBP -425426 sc-eQTL 3.58e-01 0.0524 0.0568 0.385 Pro_T L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 9.87e-01 -0.000991 0.0623 0.385 Pro_T L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.68e-01 0.015 0.0907 0.382 Treg L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.69e-39 1.03 0.0626 0.382 Treg L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.17e-01 -0.0824 0.0823 0.382 Treg L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.92e-01 -0.0947 0.0896 0.382 Treg L2
ENSG00000120805 ARL1 286987 sc-eQTL 2.01e-01 -0.119 0.0925 0.382 Treg L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 9.03e-01 0.0092 0.0755 0.382 Treg L2
ENSG00000075188 NUP37 -425361 sc-eQTL 1.38e-01 -0.121 0.081 0.376 cDC L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.04e-03 0.257 0.0772 0.376 cDC L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.66e-01 -0.142 0.102 0.376 cDC L2
ENSG00000120800 UTP20 414654 sc-eQTL 9.92e-01 0.000968 0.093 0.376 cDC L2
ENSG00000120805 ARL1 286987 sc-eQTL 8.20e-01 -0.0219 0.0963 0.376 cDC L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 8.23e-01 0.0203 0.0905 0.376 cDC L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 5.44e-01 0.0428 0.0704 0.376 cDC L2
ENSG00000185480 PARPBP -425426 sc-eQTL 8.83e-01 -0.0119 0.0804 0.376 cDC L2
ENSG00000075188 NUP37 -425361 sc-eQTL 1.99e-01 0.102 0.0791 0.382 cMono_IL1B L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 7.67e-12 0.389 0.0536 0.382 cMono_IL1B L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.01e-01 0.13 0.079 0.382 cMono_IL1B L2
ENSG00000120800 UTP20 414654 sc-eQTL 4.11e-01 -0.0735 0.0892 0.382 cMono_IL1B L2
ENSG00000120805 ARL1 286987 sc-eQTL 1.92e-01 -0.104 0.0797 0.382 cMono_IL1B L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 7.09e-01 0.0258 0.069 0.382 cMono_IL1B L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 5.15e-02 -0.114 0.0583 0.382 cMono_IL1B L2
ENSG00000075188 NUP37 -425361 sc-eQTL 7.58e-01 0.0265 0.086 0.382 cMono_S100A L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.06e-05 0.284 0.063 0.382 cMono_S100A L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 5.92e-01 -0.043 0.0802 0.382 cMono_S100A L2
ENSG00000120800 UTP20 414654 sc-eQTL 1.78e-02 -0.222 0.0927 0.382 cMono_S100A L2
ENSG00000120805 ARL1 286987 sc-eQTL 1.41e-01 -0.13 0.0879 0.382 cMono_S100A L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 7.07e-01 0.0307 0.0816 0.382 cMono_S100A L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 2.74e-01 -0.0696 0.0635 0.382 cMono_S100A L2
ENSG00000075188 NUP37 -425361 sc-eQTL 3.78e-01 0.1 0.113 0.388 gdT L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.55e-07 0.534 0.0967 0.388 gdT L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.27e-01 0.0637 0.0801 0.388 gdT L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.02e-01 0.135 0.105 0.388 gdT L2
ENSG00000120805 ARL1 286987 sc-eQTL 1.82e-01 -0.148 0.11 0.388 gdT L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 8.04e-02 0.181 0.103 0.388 gdT L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 9.89e-01 0.00143 0.105 0.388 gdT L2
ENSG00000185480 PARPBP -425426 sc-eQTL 3.95e-02 -0.212 0.102 0.388 gdT L2
ENSG00000281344 HELLPAR -502826 sc-eQTL 9.21e-01 -0.00941 0.0947 0.388 gdT L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.01e-01 -0.0213 0.0846 0.384 intMono L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 5.96e-05 0.305 0.0743 0.384 intMono L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 5.46e-01 0.0549 0.0908 0.384 intMono L2
ENSG00000120800 UTP20 414654 sc-eQTL 5.70e-01 -0.0483 0.085 0.384 intMono L2
ENSG00000120805 ARL1 286987 sc-eQTL 7.54e-01 0.0276 0.088 0.384 intMono L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 7.04e-01 0.0323 0.085 0.384 intMono L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 7.31e-01 -0.0256 0.0743 0.384 intMono L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.86e-01 -0.0126 0.0876 0.394 ncMono L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.36e-06 0.372 0.0765 0.394 ncMono L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 4.39e-01 -0.075 0.0968 0.394 ncMono L2
ENSG00000120800 UTP20 414654 sc-eQTL 1.99e-01 -0.109 0.0844 0.394 ncMono L2
ENSG00000120805 ARL1 286987 sc-eQTL 9.77e-01 0.00232 0.0815 0.394 ncMono L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 4.38e-01 0.0608 0.0782 0.394 ncMono L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 1.30e-01 -0.11 0.0725 0.394 ncMono L2
ENSG00000075188 NUP37 -425361 sc-eQTL 8.60e-01 -0.0181 0.103 0.367 pDC L2
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.50e-04 0.321 0.0857 0.367 pDC L2
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.68e-02 -0.225 0.093 0.367 pDC L2
ENSG00000120800 UTP20 414654 sc-eQTL 2.66e-02 -0.208 0.0929 0.367 pDC L2
ENSG00000120805 ARL1 286987 sc-eQTL 5.71e-01 -0.0563 0.0992 0.367 pDC L2
ENSG00000120860 WASHC3 -367390 sc-eQTL 6.14e-02 -0.161 0.0856 0.367 pDC L2
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.09e-01 0.0682 0.0667 0.367 pDC L2
ENSG00000185480 PARPBP -425426 sc-eQTL 6.82e-01 0.0365 0.0889 0.367 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -786985 sc-eQTL 7.48e-01 0.0141 0.0439 0.382 B_Memory LOneK1K
ENSG00000075188 NUP37 -425361 sc-eQTL 7.69e-01 -0.0259 0.0881 0.382 B_Memory LOneK1K
ENSG00000111666 CHPT1 -2188 sc-eQTL 4.30e-09 0.262 0.0427 0.382 B_Memory LOneK1K
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.15e-01 -0.115 0.0724 0.382 B_Memory LOneK1K
ENSG00000120800 UTP20 414654 sc-eQTL 2.84e-01 -0.0804 0.0748 0.382 B_Memory LOneK1K
ENSG00000120805 ARL1 286987 sc-eQTL 7.58e-02 -0.15 0.0842 0.382 B_Memory LOneK1K
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.79e-01 0.085 0.0631 0.382 B_Memory LOneK1K
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.11e-04 -0.27 0.0736 0.382 B_Memory LOneK1K
ENSG00000139351 SYCP3 -44713 sc-eQTL 8.03e-03 0.23 0.086 0.382 B_Memory LOneK1K
ENSG00000185480 PARPBP -425426 sc-eQTL 7.82e-02 -0.161 0.0909 0.382 B_Memory LOneK1K
ENSG00000281344 HELLPAR -502826 sc-eQTL 9.39e-01 -0.00701 0.0908 0.382 B_Memory LOneK1K
ENSG00000017427 IGF1 -786985 sc-eQTL 6.46e-01 0.0234 0.0507 0.382 B_Naive LOneK1K
ENSG00000075188 NUP37 -425361 sc-eQTL 6.13e-01 0.042 0.083 0.382 B_Naive LOneK1K
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.33e-08 0.225 0.038 0.382 B_Naive LOneK1K
ENSG00000111670 GNPTAB -136200 sc-eQTL 2.56e-03 -0.175 0.0575 0.382 B_Naive LOneK1K
ENSG00000120800 UTP20 414654 sc-eQTL 1.23e-01 0.111 0.0715 0.382 B_Naive LOneK1K
ENSG00000120805 ARL1 286987 sc-eQTL 4.31e-01 -0.0646 0.0819 0.382 B_Naive LOneK1K
ENSG00000120860 WASHC3 -367390 sc-eQTL 8.29e-02 0.106 0.061 0.382 B_Naive LOneK1K
ENSG00000136048 DRAM1 -182821 sc-eQTL 9.89e-03 -0.165 0.0634 0.382 B_Naive LOneK1K
ENSG00000139351 SYCP3 -44713 sc-eQTL 5.26e-02 0.179 0.0921 0.382 B_Naive LOneK1K
ENSG00000185480 PARPBP -425426 sc-eQTL 4.72e-01 -0.0681 0.0945 0.382 B_Naive LOneK1K
ENSG00000281344 HELLPAR -502826 sc-eQTL 8.37e-01 0.0177 0.0861 0.382 B_Naive LOneK1K
ENSG00000075188 NUP37 -425361 sc-eQTL 2.53e-01 0.0839 0.0731 0.382 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -2188 sc-eQTL 1.41e-11 0.38 0.0532 0.382 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.50e-01 0.0713 0.0762 0.382 CD14_Mono LOneK1K
ENSG00000120800 UTP20 414654 sc-eQTL 4.63e-02 -0.179 0.0894 0.382 CD14_Mono LOneK1K
ENSG00000120805 ARL1 286987 sc-eQTL 3.87e-02 -0.159 0.0764 0.382 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -367390 sc-eQTL 5.07e-01 0.0445 0.0671 0.382 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -182821 sc-eQTL 3.80e-02 -0.114 0.0545 0.382 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -425361 sc-eQTL 5.46e-01 -0.0502 0.0829 0.384 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -2188 sc-eQTL 2.09e-09 0.416 0.0665 0.384 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -136200 sc-eQTL 1.00e+00 -2.14e-06 0.0877 0.384 CD16_Mono LOneK1K
ENSG00000120800 UTP20 414654 sc-eQTL 3.12e-01 -0.0853 0.0842 0.384 CD16_Mono LOneK1K
ENSG00000120805 ARL1 286987 sc-eQTL 7.42e-01 -0.0276 0.0838 0.384 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -367390 sc-eQTL 3.34e-01 0.0703 0.0726 0.384 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -182821 sc-eQTL 4.66e-01 -0.0458 0.0627 0.384 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -425361 sc-eQTL 5.39e-01 -0.0486 0.0789 0.386 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -2188 sc-eQTL 3.58e-42 0.855 0.0494 0.386 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -136200 sc-eQTL 3.87e-01 -0.0457 0.0527 0.386 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 414654 sc-eQTL 6.99e-01 0.0313 0.081 0.386 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 286987 sc-eQTL 1.11e-01 -0.12 0.0747 0.386 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -367390 sc-eQTL 1.22e-03 0.195 0.0594 0.386 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -182821 sc-eQTL 5.39e-02 -0.157 0.081 0.386 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -425426 sc-eQTL 5.14e-01 -0.0628 0.0961 0.386 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 \N -2188 8.78e-05 5.5e-05 8.75e-06 1.75e-05 7.16e-06 2.13e-05 6.49e-05 4.69e-06 4.11e-05 1.63e-05 5.4e-05 2.24e-05 7.16e-05 1.84e-05 8.88e-06 2.74e-05 2.77e-05 3.31e-05 1.04e-05 7.2e-06 2.11e-05 4.82e-05 4.91e-05 1.07e-05 5.75e-05 1.12e-05 1.78e-05 1.41e-05 5.06e-05 3.48e-05 2.88e-05 1.61e-06 2.61e-06 7.37e-06 1.36e-05 6.29e-06 3.22e-06 3.17e-06 4.62e-06 3.56e-06 1.7e-06 6.42e-05 5.69e-06 2.96e-07 2.81e-06 4.65e-06 4.82e-06 1.6e-06 1.53e-06
ENSG00000120800 \N 414654 1.26e-06 9.07e-07 1.2e-07 1.14e-06 1.18e-07 5.92e-07 1.53e-06 7.52e-08 6.03e-07 3.04e-07 1.83e-06 5.55e-07 1.57e-06 2.4e-07 2.57e-07 1.61e-07 4.54e-07 5.02e-07 3.95e-07 1.73e-07 2.55e-07 1.2e-06 6.04e-07 2.22e-07 1.42e-06 2.42e-07 3.93e-07 2.24e-07 7.61e-07 1.03e-06 5.26e-07 3.94e-08 3.8e-08 6.11e-07 4.36e-07 1.61e-07 8.71e-07 6.2e-08 6.66e-08 5.96e-08 5.39e-08 1.3e-06 3.37e-07 1.56e-07 3.36e-08 5.38e-08 9.98e-08 0.0 4.81e-08
ENSG00000136048 \N -182821 4.39e-06 4.75e-06 3.61e-07 2.02e-06 4.76e-07 1.09e-06 7.52e-06 3.99e-07 1.85e-06 9.61e-07 5.26e-06 3.52e-06 6.07e-06 1.88e-06 1.25e-06 1.05e-06 1.04e-06 2.2e-06 1.61e-06 1.13e-06 9.25e-07 4.1e-06 3.54e-06 9.74e-07 3.46e-06 9.13e-07 1.18e-06 9.91e-07 3.88e-06 2.56e-06 2e-06 6.56e-08 2.62e-07 1.44e-06 1.97e-06 9.72e-07 1.73e-06 3.38e-07 1.18e-06 1.86e-07 1.98e-07 4.54e-06 1.35e-06 1.61e-07 2.96e-07 5.34e-07 2.6e-07 2.71e-07 5.26e-08