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Genes within 1Mb (chr12:101685419:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -796325 sc-eQTL 6.07e-01 -0.0211 0.0409 0.321 B L1
ENSG00000075188 NUP37 -434701 sc-eQTL 3.29e-01 0.0695 0.0711 0.321 B L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.79e-01 -0.0582 0.0431 0.321 B L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 4.28e-01 0.0497 0.0626 0.321 B L1
ENSG00000120800 UTP20 405314 sc-eQTL 2.29e-01 -0.0857 0.071 0.321 B L1
ENSG00000120805 ARL1 277647 sc-eQTL 4.02e-02 0.125 0.0606 0.321 B L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 9.47e-02 0.0817 0.0487 0.321 B L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.64e-01 0.0167 0.0556 0.321 B L1
ENSG00000139351 SYCP3 -54053 sc-eQTL 9.52e-01 -0.00533 0.0883 0.321 B L1
ENSG00000185480 PARPBP -434766 sc-eQTL 7.20e-01 -0.0303 0.0846 0.321 B L1
ENSG00000281344 HELLPAR -512166 sc-eQTL 3.79e-01 -0.0694 0.0788 0.321 B L1
ENSG00000075188 NUP37 -434701 sc-eQTL 6.01e-01 -0.0338 0.0646 0.321 CD4T L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 9.55e-01 -0.00493 0.0873 0.321 CD4T L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 2.06e-01 0.0766 0.0603 0.321 CD4T L1
ENSG00000120800 UTP20 405314 sc-eQTL 9.36e-01 -0.00538 0.0669 0.321 CD4T L1
ENSG00000120805 ARL1 277647 sc-eQTL 2.67e-01 0.0726 0.0653 0.321 CD4T L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 9.27e-01 -0.0042 0.0458 0.321 CD4T L1
ENSG00000075188 NUP37 -434701 sc-eQTL 5.71e-01 0.0454 0.08 0.321 CD8T L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 7.26e-01 0.0305 0.0868 0.321 CD8T L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 9.84e-01 -0.00116 0.057 0.321 CD8T L1
ENSG00000120800 UTP20 405314 sc-eQTL 7.73e-01 0.0207 0.0719 0.321 CD8T L1
ENSG00000120805 ARL1 277647 sc-eQTL 6.94e-01 0.0313 0.0793 0.321 CD8T L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.68e-01 -0.0166 0.0563 0.321 CD8T L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.53e-01 0.075 0.0806 0.321 CD8T L1
ENSG00000075188 NUP37 -434701 sc-eQTL 5.12e-01 0.06 0.0913 0.32 DC L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.53e-02 -0.175 0.0827 0.32 DC L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 5.44e-01 0.0559 0.0919 0.32 DC L1
ENSG00000120800 UTP20 405314 sc-eQTL 3.79e-01 0.0868 0.0984 0.32 DC L1
ENSG00000120805 ARL1 277647 sc-eQTL 5.24e-01 0.065 0.102 0.32 DC L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 8.72e-01 -0.0141 0.0878 0.32 DC L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 9.44e-01 -0.00507 0.0725 0.32 DC L1
ENSG00000185480 PARPBP -434766 sc-eQTL 1.92e-01 0.124 0.0951 0.32 DC L1
ENSG00000075188 NUP37 -434701 sc-eQTL 2.22e-01 0.0921 0.0751 0.321 Mono L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 4.25e-01 -0.0509 0.0637 0.321 Mono L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 6.55e-01 -0.0357 0.0799 0.321 Mono L1
ENSG00000120800 UTP20 405314 sc-eQTL 1.34e-01 0.133 0.0887 0.321 Mono L1
ENSG00000120805 ARL1 277647 sc-eQTL 5.13e-01 -0.0537 0.082 0.321 Mono L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 8.30e-02 -0.125 0.0717 0.321 Mono L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 9.10e-02 -0.0993 0.0585 0.321 Mono L1
ENSG00000075188 NUP37 -434701 sc-eQTL 1.83e-01 0.112 0.0839 0.322 NK L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 7.44e-01 -0.0256 0.0782 0.322 NK L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.89e-02 -0.0993 0.0563 0.322 NK L1
ENSG00000120800 UTP20 405314 sc-eQTL 2.78e-01 0.0989 0.0909 0.322 NK L1
ENSG00000120805 ARL1 277647 sc-eQTL 2.98e-01 0.0872 0.0836 0.322 NK L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.95e-01 -0.0337 0.0631 0.322 NK L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.67e-01 0.124 0.0895 0.322 NK L1
ENSG00000185480 PARPBP -434766 sc-eQTL 1.75e-02 0.249 0.104 0.322 NK L1
ENSG00000017427 IGF1 -796325 sc-eQTL 9.25e-01 -0.00294 0.0311 0.321 Other_T L1
ENSG00000075188 NUP37 -434701 sc-eQTL 9.60e-01 -0.003 0.0593 0.321 Other_T L1
ENSG00000111666 CHPT1 -11528 sc-eQTL 2.24e-01 -0.105 0.0863 0.321 Other_T L1
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.70e-01 0.0561 0.0624 0.321 Other_T L1
ENSG00000120800 UTP20 405314 sc-eQTL 8.58e-01 0.0175 0.0976 0.321 Other_T L1
ENSG00000120805 ARL1 277647 sc-eQTL 9.88e-01 -0.00111 0.0712 0.321 Other_T L1
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.43e-01 -0.0925 0.0629 0.321 Other_T L1
ENSG00000136048 DRAM1 -192161 sc-eQTL 5.31e-01 -0.0475 0.0758 0.321 Other_T L1
ENSG00000185480 PARPBP -434766 sc-eQTL 8.96e-01 -0.00823 0.0632 0.321 Other_T L1
ENSG00000281344 HELLPAR -512166 sc-eQTL 5.85e-01 0.0401 0.0735 0.321 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -796325 sc-eQTL 8.80e-01 -0.00305 0.0202 0.332 B_Activated L2
ENSG00000075188 NUP37 -434701 sc-eQTL 5.95e-01 -0.0559 0.105 0.332 B_Activated L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.51e-02 -0.187 0.0762 0.332 B_Activated L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.01e-01 0.114 0.11 0.332 B_Activated L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.43e-01 0.0494 0.106 0.332 B_Activated L2
ENSG00000120805 ARL1 277647 sc-eQTL 5.17e-01 0.0714 0.11 0.332 B_Activated L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 4.28e-01 0.0832 0.105 0.332 B_Activated L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 8.77e-01 0.0163 0.105 0.332 B_Activated L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 3.82e-01 -0.0757 0.0863 0.332 B_Activated L2
ENSG00000185480 PARPBP -434766 sc-eQTL 9.78e-01 0.00242 0.0871 0.332 B_Activated L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 8.45e-01 0.0161 0.0818 0.332 B_Activated L2
ENSG00000017427 IGF1 -796325 sc-eQTL 6.71e-01 -0.0174 0.0409 0.32 B_Intermediate L2
ENSG00000075188 NUP37 -434701 sc-eQTL 2.72e-01 0.112 0.102 0.32 B_Intermediate L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.10e-03 -0.177 0.0533 0.32 B_Intermediate L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 2.78e-01 0.0878 0.0807 0.32 B_Intermediate L2
ENSG00000120800 UTP20 405314 sc-eQTL 5.12e-01 -0.0589 0.0898 0.32 B_Intermediate L2
ENSG00000120805 ARL1 277647 sc-eQTL 9.82e-01 0.00227 0.101 0.32 B_Intermediate L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 4.08e-01 0.0691 0.0834 0.32 B_Intermediate L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 8.03e-01 0.0224 0.0897 0.32 B_Intermediate L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 9.41e-01 0.00696 0.0943 0.32 B_Intermediate L2
ENSG00000185480 PARPBP -434766 sc-eQTL 8.08e-01 0.0241 0.0989 0.32 B_Intermediate L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 7.62e-01 0.0287 0.0949 0.32 B_Intermediate L2
ENSG00000017427 IGF1 -796325 sc-eQTL 6.45e-01 -0.0173 0.0374 0.319 B_Memory L2
ENSG00000075188 NUP37 -434701 sc-eQTL 7.69e-01 0.0291 0.0988 0.319 B_Memory L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.63e-02 -0.135 0.0638 0.319 B_Memory L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 8.59e-01 0.0157 0.0883 0.319 B_Memory L2
ENSG00000120800 UTP20 405314 sc-eQTL 7.08e-02 -0.175 0.0962 0.319 B_Memory L2
ENSG00000120805 ARL1 277647 sc-eQTL 2.26e-01 0.117 0.0961 0.319 B_Memory L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.49e-01 0.0518 0.0862 0.319 B_Memory L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.12e-01 0.0334 0.0904 0.319 B_Memory L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 4.92e-01 -0.064 0.093 0.319 B_Memory L2
ENSG00000185480 PARPBP -434766 sc-eQTL 4.31e-01 0.075 0.0951 0.319 B_Memory L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 3.41e-01 0.0826 0.0865 0.319 B_Memory L2
ENSG00000017427 IGF1 -796325 sc-eQTL 7.07e-01 0.0194 0.0517 0.321 B_Naive1 L2
ENSG00000075188 NUP37 -434701 sc-eQTL 7.09e-01 -0.035 0.0935 0.321 B_Naive1 L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.91e-01 -0.0417 0.0485 0.321 B_Naive1 L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 2.06e-01 0.0869 0.0685 0.321 B_Naive1 L2
ENSG00000120800 UTP20 405314 sc-eQTL 3.87e-01 -0.0706 0.0815 0.321 B_Naive1 L2
ENSG00000120805 ARL1 277647 sc-eQTL 3.62e-01 0.0831 0.0909 0.321 B_Naive1 L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 2.06e-01 0.0871 0.0687 0.321 B_Naive1 L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 9.40e-01 -0.0056 0.0747 0.321 B_Naive1 L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 9.97e-01 -0.000381 0.101 0.321 B_Naive1 L2
ENSG00000185480 PARPBP -434766 sc-eQTL 7.36e-01 -0.0333 0.0988 0.321 B_Naive1 L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 6.44e-01 0.0428 0.0925 0.321 B_Naive1 L2
ENSG00000017427 IGF1 -796325 sc-eQTL 1.95e-02 -0.104 0.0444 0.32 B_Naive2 L2
ENSG00000075188 NUP37 -434701 sc-eQTL 7.99e-01 0.0235 0.0922 0.32 B_Naive2 L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 2.50e-01 0.0568 0.0492 0.32 B_Naive2 L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.32e-01 -0.0742 0.0763 0.32 B_Naive2 L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.76e-01 -0.037 0.0886 0.32 B_Naive2 L2
ENSG00000120805 ARL1 277647 sc-eQTL 9.74e-01 0.0032 0.0973 0.32 B_Naive2 L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 2.50e-01 0.0975 0.0845 0.32 B_Naive2 L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.47e-01 -0.0271 0.0839 0.32 B_Naive2 L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 8.82e-01 0.0131 0.0884 0.32 B_Naive2 L2
ENSG00000185480 PARPBP -434766 sc-eQTL 1.64e-01 -0.142 0.101 0.32 B_Naive2 L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 9.09e-01 0.01 0.0879 0.32 B_Naive2 L2
ENSG00000075188 NUP37 -434701 sc-eQTL 6.54e-01 0.0446 0.0994 0.314 CD4_CTL L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 7.15e-02 -0.179 0.0988 0.314 CD4_CTL L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.20e-01 -0.0865 0.0869 0.314 CD4_CTL L2
ENSG00000120800 UTP20 405314 sc-eQTL 9.73e-01 0.00325 0.0958 0.314 CD4_CTL L2
ENSG00000120805 ARL1 277647 sc-eQTL 9.72e-01 0.00361 0.101 0.314 CD4_CTL L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.35e-01 0.0604 0.0973 0.314 CD4_CTL L2
ENSG00000075188 NUP37 -434701 sc-eQTL 5.07e-01 -0.0493 0.0742 0.321 CD4_Naive L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 5.79e-01 0.0476 0.0856 0.321 CD4_Naive L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 8.24e-02 0.114 0.0656 0.321 CD4_Naive L2
ENSG00000120800 UTP20 405314 sc-eQTL 3.29e-01 0.0703 0.0718 0.321 CD4_Naive L2
ENSG00000120805 ARL1 277647 sc-eQTL 9.85e-01 0.00151 0.078 0.321 CD4_Naive L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.46e-01 -0.0177 0.0545 0.321 CD4_Naive L2
ENSG00000075188 NUP37 -434701 sc-eQTL 5.84e-01 -0.0436 0.0796 0.321 CD4_TCM L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 8.20e-01 -0.0209 0.0919 0.321 CD4_TCM L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 5.82e-01 0.0392 0.0711 0.321 CD4_TCM L2
ENSG00000120800 UTP20 405314 sc-eQTL 1.40e-02 -0.218 0.0878 0.321 CD4_TCM L2
ENSG00000120805 ARL1 277647 sc-eQTL 6.94e-03 0.223 0.0819 0.321 CD4_TCM L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 6.38e-01 0.0258 0.0546 0.321 CD4_TCM L2
ENSG00000075188 NUP37 -434701 sc-eQTL 9.02e-01 -0.0116 0.0942 0.321 CD4_TEM L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.74e-01 -0.123 0.0903 0.321 CD4_TEM L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.33e-01 -0.0845 0.0871 0.321 CD4_TEM L2
ENSG00000120800 UTP20 405314 sc-eQTL 8.64e-01 -0.0161 0.0944 0.321 CD4_TEM L2
ENSG00000120805 ARL1 277647 sc-eQTL 6.35e-01 0.0424 0.0892 0.321 CD4_TEM L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.60e-01 0.0466 0.0799 0.321 CD4_TEM L2
ENSG00000075188 NUP37 -434701 sc-eQTL 9.74e-01 0.00282 0.085 0.321 CD8_CTL L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 9.20e-01 -0.00877 0.0872 0.321 CD8_CTL L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 8.21e-01 -0.0158 0.0697 0.321 CD8_CTL L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.67e-01 -0.0406 0.0943 0.321 CD8_CTL L2
ENSG00000120805 ARL1 277647 sc-eQTL 2.87e-01 -0.0994 0.093 0.321 CD8_CTL L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.99e-01 -0.0419 0.0795 0.321 CD8_CTL L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.48e-01 0.0929 0.0988 0.321 CD8_CTL L2
ENSG00000075188 NUP37 -434701 sc-eQTL 3.87e-01 0.0783 0.0903 0.321 CD8_Naive L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 9.13e-01 0.00985 0.0899 0.321 CD8_Naive L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.28e-01 0.079 0.0805 0.321 CD8_Naive L2
ENSG00000120800 UTP20 405314 sc-eQTL 8.31e-01 0.0183 0.0858 0.321 CD8_Naive L2
ENSG00000120805 ARL1 277647 sc-eQTL 3.89e-01 0.0803 0.093 0.321 CD8_Naive L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.57e-01 0.036 0.0613 0.321 CD8_Naive L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 4.05e-01 -0.0789 0.0946 0.321 CD8_Naive L2
ENSG00000075188 NUP37 -434701 sc-eQTL 3.49e-01 0.0913 0.0972 0.315 CD8_TCM L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 5.91e-01 0.047 0.0873 0.315 CD8_TCM L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 6.41e-01 0.0422 0.0904 0.315 CD8_TCM L2
ENSG00000120800 UTP20 405314 sc-eQTL 5.57e-01 0.0579 0.0985 0.315 CD8_TCM L2
ENSG00000120805 ARL1 277647 sc-eQTL 5.57e-01 -0.057 0.0968 0.315 CD8_TCM L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.60e-01 -0.122 0.0863 0.315 CD8_TCM L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.70e-02 0.196 0.0935 0.315 CD8_TCM L2
ENSG00000075188 NUP37 -434701 sc-eQTL 7.92e-01 -0.0251 0.095 0.32 CD8_TEM L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.95e-01 0.0764 0.0897 0.32 CD8_TEM L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.76e-01 -0.0274 0.0962 0.32 CD8_TEM L2
ENSG00000120800 UTP20 405314 sc-eQTL 7.80e-01 -0.0289 0.103 0.32 CD8_TEM L2
ENSG00000120805 ARL1 277647 sc-eQTL 5.81e-01 0.0545 0.0987 0.32 CD8_TEM L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.65e-01 0.0258 0.0863 0.32 CD8_TEM L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 4.31e-01 0.0751 0.095 0.32 CD8_TEM L2
ENSG00000017427 IGF1 -796325 sc-eQTL 1.64e-01 0.0464 0.0333 0.32 MAIT L2
ENSG00000075188 NUP37 -434701 sc-eQTL 6.72e-01 0.0397 0.0937 0.32 MAIT L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 8.67e-01 -0.0154 0.0913 0.32 MAIT L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.70e-01 0.0726 0.0808 0.32 MAIT L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.42e-01 0.0452 0.097 0.32 MAIT L2
ENSG00000120805 ARL1 277647 sc-eQTL 8.80e-01 -0.015 0.099 0.32 MAIT L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 2.58e-02 -0.183 0.0813 0.32 MAIT L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.36e-01 -0.0899 0.0932 0.32 MAIT L2
ENSG00000185480 PARPBP -434766 sc-eQTL 5.09e-01 -0.0604 0.0914 0.32 MAIT L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 4.79e-02 0.16 0.0802 0.32 MAIT L2
ENSG00000075188 NUP37 -434701 sc-eQTL 1.36e-01 0.157 0.105 0.316 NK_CD56bright L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.95e-01 0.0648 0.0761 0.316 NK_CD56bright L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 9.12e-01 -0.0098 0.0881 0.316 NK_CD56bright L2
ENSG00000120800 UTP20 405314 sc-eQTL 3.05e-01 0.106 0.103 0.316 NK_CD56bright L2
ENSG00000120805 ARL1 277647 sc-eQTL 7.78e-01 0.0283 0.1 0.316 NK_CD56bright L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.32e-01 -0.137 0.0903 0.316 NK_CD56bright L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.60e-01 0.134 0.0951 0.316 NK_CD56bright L2
ENSG00000185480 PARPBP -434766 sc-eQTL 7.09e-01 -0.0377 0.101 0.316 NK_CD56bright L2
ENSG00000075188 NUP37 -434701 sc-eQTL 3.09e-01 0.0942 0.0925 0.321 NK_CD56dim L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 6.55e-01 -0.0405 0.0906 0.321 NK_CD56dim L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 2.71e-01 -0.0754 0.0683 0.321 NK_CD56dim L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.16e-01 0.0477 0.0951 0.321 NK_CD56dim L2
ENSG00000120805 ARL1 277647 sc-eQTL 7.08e-01 0.0344 0.092 0.321 NK_CD56dim L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 3.12e-01 0.0797 0.0786 0.321 NK_CD56dim L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.29e-01 0.145 0.0952 0.321 NK_CD56dim L2
ENSG00000185480 PARPBP -434766 sc-eQTL 6.92e-03 0.289 0.106 0.321 NK_CD56dim L2
ENSG00000075188 NUP37 -434701 sc-eQTL 6.93e-01 -0.0384 0.0971 0.317 NK_HLA L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 8.06e-01 0.0246 0.0997 0.317 NK_HLA L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 1.57e-01 -0.113 0.0797 0.317 NK_HLA L2
ENSG00000120800 UTP20 405314 sc-eQTL 7.39e-01 0.0349 0.105 0.317 NK_HLA L2
ENSG00000120805 ARL1 277647 sc-eQTL 4.28e-01 -0.0848 0.107 0.317 NK_HLA L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 9.70e-01 -0.00379 0.0994 0.317 NK_HLA L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.38e-01 0.0978 0.102 0.317 NK_HLA L2
ENSG00000185480 PARPBP -434766 sc-eQTL 1.88e-01 0.132 0.1 0.317 NK_HLA L2
ENSG00000075188 NUP37 -434701 sc-eQTL 8.06e-01 -0.023 0.0936 0.321 NK_cytokine L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 4.20e-01 -0.0706 0.0875 0.321 NK_cytokine L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.21e-01 -0.0661 0.0664 0.321 NK_cytokine L2
ENSG00000120800 UTP20 405314 sc-eQTL 2.66e-01 0.103 0.0925 0.321 NK_cytokine L2
ENSG00000120805 ARL1 277647 sc-eQTL 2.20e-01 0.114 0.093 0.321 NK_cytokine L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.45e-01 -0.0445 0.0734 0.321 NK_cytokine L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 3.11e-01 -0.0969 0.0955 0.321 NK_cytokine L2
ENSG00000185480 PARPBP -434766 sc-eQTL 5.52e-01 0.0616 0.103 0.321 NK_cytokine L2
ENSG00000017427 IGF1 -796325 sc-eQTL 9.33e-01 -0.00636 0.0753 0.344 PB L2
ENSG00000075188 NUP37 -434701 sc-eQTL 6.96e-01 -0.0397 0.101 0.344 PB L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 6.40e-01 -0.0368 0.0786 0.344 PB L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 1.04e-01 -0.183 0.112 0.344 PB L2
ENSG00000120800 UTP20 405314 sc-eQTL 8.65e-01 0.0221 0.13 0.344 PB L2
ENSG00000120805 ARL1 277647 sc-eQTL 4.55e-01 0.0597 0.0796 0.344 PB L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.41e-01 -0.135 0.0912 0.344 PB L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 8.11e-01 0.0224 0.0934 0.344 PB L2
ENSG00000139351 SYCP3 -54053 sc-eQTL 1.10e-01 -0.173 0.107 0.344 PB L2
ENSG00000185480 PARPBP -434766 sc-eQTL 4.93e-01 0.0682 0.0993 0.344 PB L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 2.81e-02 -0.2 0.0901 0.344 PB L2
ENSG00000017427 IGF1 -796325 sc-eQTL 2.52e-01 0.0396 0.0344 0.32 Pro_T L2
ENSG00000075188 NUP37 -434701 sc-eQTL 1.59e-01 0.0979 0.0694 0.32 Pro_T L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 7.97e-02 -0.161 0.0917 0.32 Pro_T L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 6.19e-01 -0.034 0.0683 0.32 Pro_T L2
ENSG00000120800 UTP20 405314 sc-eQTL 7.81e-01 -0.0271 0.0976 0.32 Pro_T L2
ENSG00000120805 ARL1 277647 sc-eQTL 1.63e-01 -0.103 0.0734 0.32 Pro_T L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.79e-01 0.0226 0.0802 0.32 Pro_T L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.11e-01 -0.109 0.0684 0.32 Pro_T L2
ENSG00000185480 PARPBP -434766 sc-eQTL 5.16e-02 0.124 0.0631 0.32 Pro_T L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 5.28e-01 0.044 0.0696 0.32 Pro_T L2
ENSG00000075188 NUP37 -434701 sc-eQTL 7.44e-01 0.0313 0.0957 0.321 Treg L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 6.68e-01 -0.0428 0.0995 0.321 Treg L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 1.68e-01 0.12 0.0866 0.321 Treg L2
ENSG00000120800 UTP20 405314 sc-eQTL 5.37e-01 0.0586 0.0947 0.321 Treg L2
ENSG00000120805 ARL1 277647 sc-eQTL 7.75e-01 0.028 0.0979 0.321 Treg L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.93e-01 0.0209 0.0796 0.321 Treg L2
ENSG00000075188 NUP37 -434701 sc-eQTL 2.69e-01 0.0992 0.0895 0.32 cDC L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.33e-01 -0.131 0.0871 0.32 cDC L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.22e-01 -0.0403 0.113 0.32 cDC L2
ENSG00000120800 UTP20 405314 sc-eQTL 8.69e-02 0.175 0.102 0.32 cDC L2
ENSG00000120805 ARL1 277647 sc-eQTL 7.16e-01 0.0387 0.106 0.32 cDC L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.13e-01 0.0368 0.0997 0.32 cDC L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 2.24e-01 -0.0944 0.0774 0.32 cDC L2
ENSG00000185480 PARPBP -434766 sc-eQTL 4.50e-02 0.177 0.0877 0.32 cDC L2
ENSG00000075188 NUP37 -434701 sc-eQTL 6.09e-01 0.044 0.0858 0.321 cMono_IL1B L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.38e-01 -0.0621 0.0646 0.321 cMono_IL1B L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 8.27e-01 0.0188 0.0859 0.321 cMono_IL1B L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.11e-01 0.0492 0.0966 0.321 cMono_IL1B L2
ENSG00000120805 ARL1 277647 sc-eQTL 3.59e-01 -0.0794 0.0864 0.321 cMono_IL1B L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 2.85e-01 -0.0798 0.0744 0.321 cMono_IL1B L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.00e-01 -0.104 0.0632 0.321 cMono_IL1B L2
ENSG00000075188 NUP37 -434701 sc-eQTL 2.16e-01 0.116 0.0936 0.321 cMono_S100A L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.32e-01 -0.108 0.0716 0.321 cMono_S100A L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.48e-01 -0.0823 0.0874 0.321 cMono_S100A L2
ENSG00000120800 UTP20 405314 sc-eQTL 4.66e-01 0.0749 0.102 0.321 cMono_S100A L2
ENSG00000120805 ARL1 277647 sc-eQTL 9.66e-01 -0.00409 0.0964 0.321 cMono_S100A L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 4.29e-01 -0.0706 0.089 0.321 cMono_S100A L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 6.95e-01 -0.0272 0.0695 0.321 cMono_S100A L2
ENSG00000075188 NUP37 -434701 sc-eQTL 5.86e-01 0.0643 0.118 0.3 gdT L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 3.56e-01 -0.102 0.11 0.3 gdT L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.74e-01 -0.024 0.0834 0.3 gdT L2
ENSG00000120800 UTP20 405314 sc-eQTL 6.90e-02 -0.2 0.109 0.3 gdT L2
ENSG00000120805 ARL1 277647 sc-eQTL 3.14e-02 0.247 0.114 0.3 gdT L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 2.70e-01 0.119 0.107 0.3 gdT L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.93e-01 -0.0288 0.109 0.3 gdT L2
ENSG00000185480 PARPBP -434766 sc-eQTL 8.70e-02 0.183 0.106 0.3 gdT L2
ENSG00000281344 HELLPAR -512166 sc-eQTL 1.82e-01 -0.131 0.0978 0.3 gdT L2
ENSG00000075188 NUP37 -434701 sc-eQTL 9.13e-01 0.0105 0.0952 0.327 intMono L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 9.73e-01 -0.00298 0.0871 0.327 intMono L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.78e-01 0.0289 0.102 0.327 intMono L2
ENSG00000120800 UTP20 405314 sc-eQTL 5.21e-01 0.0615 0.0956 0.327 intMono L2
ENSG00000120805 ARL1 277647 sc-eQTL 7.17e-01 -0.0359 0.099 0.327 intMono L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.91e-01 -0.0515 0.0957 0.327 intMono L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.87e-01 -0.0227 0.0837 0.327 intMono L2
ENSG00000075188 NUP37 -434701 sc-eQTL 3.73e-01 0.0855 0.0958 0.317 ncMono L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 7.88e-01 0.0238 0.0886 0.317 ncMono L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 3.46e-01 0.1 0.106 0.317 ncMono L2
ENSG00000120800 UTP20 405314 sc-eQTL 8.37e-01 0.0192 0.0928 0.317 ncMono L2
ENSG00000120805 ARL1 277647 sc-eQTL 2.69e-01 0.0986 0.0889 0.317 ncMono L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.74e-01 -0.0246 0.0858 0.317 ncMono L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 2.83e-02 -0.174 0.0789 0.317 ncMono L2
ENSG00000075188 NUP37 -434701 sc-eQTL 5.67e-01 -0.0654 0.114 0.319 pDC L2
ENSG00000111666 CHPT1 -11528 sc-eQTL 5.35e-01 -0.0617 0.0993 0.319 pDC L2
ENSG00000111670 GNPTAB -145540 sc-eQTL 4.91e-02 0.206 0.104 0.319 pDC L2
ENSG00000120800 UTP20 405314 sc-eQTL 2.41e-01 0.123 0.104 0.319 pDC L2
ENSG00000120805 ARL1 277647 sc-eQTL 8.85e-01 -0.0159 0.11 0.319 pDC L2
ENSG00000120860 WASHC3 -376730 sc-eQTL 9.12e-01 -0.0106 0.0962 0.319 pDC L2
ENSG00000136048 DRAM1 -192161 sc-eQTL 6.14e-01 0.0376 0.0743 0.319 pDC L2
ENSG00000185480 PARPBP -434766 sc-eQTL 4.64e-01 -0.0724 0.0986 0.319 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -796325 sc-eQTL 9.22e-01 0.00465 0.0476 0.321 B_Memory LOneK1K
ENSG00000075188 NUP37 -434701 sc-eQTL 5.82e-01 0.0527 0.0956 0.321 B_Memory LOneK1K
ENSG00000111666 CHPT1 -11528 sc-eQTL 5.55e-04 -0.171 0.0489 0.321 B_Memory LOneK1K
ENSG00000111670 GNPTAB -145540 sc-eQTL 4.36e-01 0.0616 0.0789 0.321 B_Memory LOneK1K
ENSG00000120800 UTP20 405314 sc-eQTL 1.17e-01 -0.127 0.0809 0.321 B_Memory LOneK1K
ENSG00000120805 ARL1 277647 sc-eQTL 6.86e-01 0.0373 0.092 0.321 B_Memory LOneK1K
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.88e-01 0.0373 0.0687 0.321 B_Memory LOneK1K
ENSG00000136048 DRAM1 -192161 sc-eQTL 6.04e-01 0.0427 0.0823 0.321 B_Memory LOneK1K
ENSG00000139351 SYCP3 -54053 sc-eQTL 5.79e-01 -0.0527 0.0948 0.321 B_Memory LOneK1K
ENSG00000185480 PARPBP -434766 sc-eQTL 5.38e-01 0.0612 0.0992 0.321 B_Memory LOneK1K
ENSG00000281344 HELLPAR -512166 sc-eQTL 2.68e-01 0.109 0.0982 0.321 B_Memory LOneK1K
ENSG00000017427 IGF1 -796325 sc-eQTL 5.53e-01 -0.0325 0.0547 0.321 B_Naive LOneK1K
ENSG00000075188 NUP37 -434701 sc-eQTL 9.37e-01 0.00711 0.0896 0.321 B_Naive LOneK1K
ENSG00000111666 CHPT1 -11528 sc-eQTL 5.70e-01 -0.0251 0.0442 0.321 B_Naive LOneK1K
ENSG00000111670 GNPTAB -145540 sc-eQTL 2.92e-01 0.0668 0.0632 0.321 B_Naive LOneK1K
ENSG00000120800 UTP20 405314 sc-eQTL 1.54e-01 -0.11 0.0772 0.321 B_Naive LOneK1K
ENSG00000120805 ARL1 277647 sc-eQTL 6.80e-01 0.0365 0.0884 0.321 B_Naive LOneK1K
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.55e-01 0.0942 0.066 0.321 B_Naive LOneK1K
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.84e-01 -0.0191 0.0695 0.321 B_Naive LOneK1K
ENSG00000139351 SYCP3 -54053 sc-eQTL 9.37e-01 0.00788 0.1 0.321 B_Naive LOneK1K
ENSG00000185480 PARPBP -434766 sc-eQTL 5.74e-01 -0.0574 0.102 0.321 B_Naive LOneK1K
ENSG00000281344 HELLPAR -512166 sc-eQTL 8.33e-01 0.0196 0.0929 0.321 B_Naive LOneK1K
ENSG00000075188 NUP37 -434701 sc-eQTL 1.18e-01 0.123 0.0783 0.321 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -11528 sc-eQTL 1.43e-01 -0.0931 0.0634 0.321 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -145540 sc-eQTL 6.16e-01 -0.0411 0.0819 0.321 CD14_Mono LOneK1K
ENSG00000120800 UTP20 405314 sc-eQTL 1.13e-01 0.153 0.0963 0.321 CD14_Mono LOneK1K
ENSG00000120805 ARL1 277647 sc-eQTL 6.61e-01 -0.0364 0.0828 0.321 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -376730 sc-eQTL 1.46e-01 -0.105 0.0718 0.321 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -192161 sc-eQTL 8.74e-02 -0.101 0.0588 0.321 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -434701 sc-eQTL 5.85e-01 0.0507 0.0927 0.323 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -11528 sc-eQTL 9.95e-01 0.00051 0.081 0.323 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -145540 sc-eQTL 6.80e-01 0.0405 0.098 0.323 CD16_Mono LOneK1K
ENSG00000120800 UTP20 405314 sc-eQTL 4.67e-01 0.0686 0.0942 0.323 CD16_Mono LOneK1K
ENSG00000120805 ARL1 277647 sc-eQTL 3.70e-01 0.084 0.0935 0.323 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -376730 sc-eQTL 5.58e-01 -0.0477 0.0813 0.323 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -192161 sc-eQTL 7.90e-02 -0.123 0.0696 0.323 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -434701 sc-eQTL 3.26e-01 0.0877 0.0891 0.321 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -11528 sc-eQTL 6.89e-01 -0.0349 0.0871 0.321 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -145540 sc-eQTL 7.92e-02 -0.104 0.0592 0.321 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 405314 sc-eQTL 2.91e-01 0.0966 0.0913 0.321 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 277647 sc-eQTL 3.97e-01 0.0719 0.0848 0.321 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -376730 sc-eQTL 7.10e-01 0.0256 0.0688 0.321 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -192161 sc-eQTL 1.06e-01 0.149 0.0918 0.321 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -434766 sc-eQTL 8.44e-03 0.284 0.107 0.321 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075188 NUP37 -434701 eQTL 0.0365 0.0395 0.0188 0.0 0.0 0.302
ENSG00000111666 CHPT1 -11528 eQTL 1.03e-09 -0.166 0.0268 0.0 0.0 0.302

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -11528 7.11e-05 4.67e-05 6.99e-06 1.61e-05 6.62e-06 1.86e-05 5.71e-05 4.49e-06 3.76e-05 1.55e-05 4.86e-05 2.06e-05 6.15e-05 1.77e-05 7.75e-06 2.39e-05 2.28e-05 3.08e-05 9.37e-06 7.07e-06 1.92e-05 4.19e-05 4.33e-05 9.68e-06 5.22e-05 9.01e-06 1.65e-05 1.36e-05 4.39e-05 3.16e-05 2.51e-05 1.58e-06 2.41e-06 7.07e-06 1.3e-05 5.85e-06 2.93e-06 3.13e-06 4.43e-06 3.22e-06 1.73e-06 5.65e-05 4.92e-06 2.62e-07 2.81e-06 4.25e-06 4.38e-06 1.46e-06 1.5e-06
ENSG00000120800 \N 405314 1.45e-05 1.27e-05 4.29e-06 7.13e-06 2.38e-06 4.19e-06 1.61e-05 1.46e-06 9.4e-06 4.81e-06 1.36e-05 6.86e-06 2.09e-05 3.79e-06 3.75e-06 6.36e-06 5.78e-06 8.43e-06 3.31e-06 2.73e-06 6.01e-06 1.1e-05 1.02e-05 4.21e-06 1.93e-05 4.34e-06 4.46e-06 3.74e-06 1.07e-05 1.21e-05 7.68e-06 9.05e-07 1.29e-06 2.79e-06 4.61e-06 2.68e-06 1.9e-06 1.97e-06 1.38e-06 4.71e-07 9.74e-07 1.89e-05 2.66e-06 4.11e-07 7.75e-07 2.35e-06 1.38e-06 7.44e-07 4.14e-07