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Genes within 1Mb (chr12:101656420:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -825324 sc-eQTL 4.67e-01 -0.0274 0.0376 0.588 B L1
ENSG00000075188 NUP37 -463700 sc-eQTL 9.53e-01 0.0039 0.0655 0.588 B L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 2.04e-05 -0.166 0.0381 0.588 B L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 7.27e-01 0.0201 0.0576 0.588 B L1
ENSG00000120800 UTP20 376315 sc-eQTL 5.81e-01 -0.0362 0.0655 0.588 B L1
ENSG00000120805 ARL1 248648 sc-eQTL 8.19e-02 0.0977 0.0559 0.588 B L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 1.22e-01 0.0695 0.0448 0.588 B L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 7.38e-01 -0.0171 0.0511 0.588 B L1
ENSG00000139351 SYCP3 -83052 sc-eQTL 4.46e-01 -0.0619 0.0811 0.588 B L1
ENSG00000185480 PARPBP -463765 sc-eQTL 5.82e-01 0.0428 0.0777 0.588 B L1
ENSG00000281344 HELLPAR -541165 sc-eQTL 6.31e-01 -0.0349 0.0725 0.588 B L1
ENSG00000075188 NUP37 -463700 sc-eQTL 9.46e-01 0.00399 0.059 0.588 CD4T L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 8.69e-01 -0.0132 0.0797 0.588 CD4T L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 7.63e-01 -0.0167 0.0552 0.588 CD4T L1
ENSG00000120800 UTP20 376315 sc-eQTL 5.72e-01 0.0346 0.061 0.588 CD4T L1
ENSG00000120805 ARL1 248648 sc-eQTL 4.51e-02 0.119 0.0592 0.588 CD4T L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 4.08e-01 0.0346 0.0417 0.588 CD4T L1
ENSG00000075188 NUP37 -463700 sc-eQTL 2.37e-01 -0.0875 0.0737 0.588 CD8T L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.57e-01 -0.0356 0.0801 0.588 CD8T L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.34e-01 0.0786 0.0523 0.588 CD8T L1
ENSG00000120800 UTP20 376315 sc-eQTL 6.59e-01 0.0293 0.0664 0.588 CD8T L1
ENSG00000120805 ARL1 248648 sc-eQTL 9.95e-01 0.00047 0.0732 0.588 CD8T L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 2.13e-01 0.0648 0.0518 0.588 CD8T L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 2.07e-01 0.0939 0.0743 0.588 CD8T L1
ENSG00000075188 NUP37 -463700 sc-eQTL 3.35e-01 0.082 0.0849 0.59 DC L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 3.41e-01 -0.0741 0.0776 0.59 DC L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 4.60e-02 0.17 0.0847 0.59 DC L1
ENSG00000120800 UTP20 376315 sc-eQTL 5.01e-01 0.0618 0.0916 0.59 DC L1
ENSG00000120805 ARL1 248648 sc-eQTL 6.89e-02 0.172 0.0941 0.59 DC L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.48e-01 0.0491 0.0816 0.59 DC L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 1.05e-01 0.109 0.067 0.59 DC L1
ENSG00000185480 PARPBP -463765 sc-eQTL 6.46e-01 0.0409 0.0888 0.59 DC L1
ENSG00000075188 NUP37 -463700 sc-eQTL 9.99e-01 -8.57e-05 0.0697 0.588 Mono L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 7.92e-01 -0.0156 0.059 0.588 Mono L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 9.03e-01 0.00906 0.074 0.588 Mono L1
ENSG00000120800 UTP20 376315 sc-eQTL 3.49e-01 0.0774 0.0823 0.588 Mono L1
ENSG00000120805 ARL1 248648 sc-eQTL 8.35e-01 -0.0159 0.0759 0.588 Mono L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 9.02e-01 0.00825 0.0668 0.588 Mono L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.16e-01 -0.00577 0.0545 0.588 Mono L1
ENSG00000075188 NUP37 -463700 sc-eQTL 3.53e-01 0.0704 0.0756 0.59 NK L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 8.39e-01 -0.0143 0.0704 0.59 NK L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.26e-01 0.0779 0.0507 0.59 NK L1
ENSG00000120800 UTP20 376315 sc-eQTL 8.84e-01 -0.012 0.0821 0.59 NK L1
ENSG00000120805 ARL1 248648 sc-eQTL 1.91e-01 0.0985 0.0751 0.59 NK L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.56e-01 -0.0103 0.0569 0.59 NK L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.62e-01 0.00386 0.0809 0.59 NK L1
ENSG00000185480 PARPBP -463765 sc-eQTL 1.36e-01 0.141 0.0944 0.59 NK L1
ENSG00000017427 IGF1 -825324 sc-eQTL 2.25e-01 -0.035 0.0288 0.588 Other_T L1
ENSG00000075188 NUP37 -463700 sc-eQTL 3.47e-01 0.0517 0.0549 0.588 Other_T L1
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.67e-02 -0.147 0.0797 0.588 Other_T L1
ENSG00000111670 GNPTAB -174539 sc-eQTL 8.90e-01 -0.00802 0.0579 0.588 Other_T L1
ENSG00000120800 UTP20 376315 sc-eQTL 6.76e-01 -0.0379 0.0905 0.588 Other_T L1
ENSG00000120805 ARL1 248648 sc-eQTL 7.30e-01 -0.0228 0.066 0.588 Other_T L1
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.65e-01 0.00998 0.0586 0.588 Other_T L1
ENSG00000136048 DRAM1 -221160 sc-eQTL 7.81e-01 -0.0196 0.0703 0.588 Other_T L1
ENSG00000185480 PARPBP -463765 sc-eQTL 3.21e-01 -0.0581 0.0585 0.588 Other_T L1
ENSG00000281344 HELLPAR -541165 sc-eQTL 1.74e-01 -0.0926 0.0678 0.588 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -825324 sc-eQTL 2.28e-01 -0.0219 0.0181 0.597 B_Activated L2
ENSG00000075188 NUP37 -463700 sc-eQTL 4.34e-01 -0.0739 0.0942 0.597 B_Activated L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 1.00e-04 -0.266 0.0668 0.597 B_Activated L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 8.86e-01 0.0142 0.0991 0.597 B_Activated L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.69e-01 0.0547 0.0958 0.597 B_Activated L2
ENSG00000120805 ARL1 248648 sc-eQTL 6.73e-01 0.0418 0.099 0.597 B_Activated L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 1.21e-01 0.146 0.0937 0.597 B_Activated L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 8.32e-01 -0.0202 0.0947 0.597 B_Activated L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 5.96e-02 -0.146 0.077 0.597 B_Activated L2
ENSG00000185480 PARPBP -463765 sc-eQTL 8.65e-02 0.134 0.0776 0.597 B_Activated L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 9.57e-01 -0.00394 0.0736 0.597 B_Activated L2
ENSG00000017427 IGF1 -825324 sc-eQTL 1.94e-01 -0.0482 0.037 0.588 B_Intermediate L2
ENSG00000075188 NUP37 -463700 sc-eQTL 9.14e-01 -0.00998 0.0925 0.588 B_Intermediate L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.78e-06 -0.215 0.0474 0.588 B_Intermediate L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 5.05e-01 0.049 0.0733 0.588 B_Intermediate L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.96e-01 -0.0432 0.0815 0.588 B_Intermediate L2
ENSG00000120805 ARL1 248648 sc-eQTL 7.90e-01 -0.0244 0.0918 0.588 B_Intermediate L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 7.05e-01 0.0287 0.0758 0.588 B_Intermediate L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 3.87e-01 -0.0705 0.0812 0.588 B_Intermediate L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 1.94e-01 -0.111 0.0852 0.588 B_Intermediate L2
ENSG00000185480 PARPBP -463765 sc-eQTL 1.17e-01 0.14 0.0893 0.588 B_Intermediate L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 6.52e-01 -0.0388 0.0861 0.588 B_Intermediate L2
ENSG00000017427 IGF1 -825324 sc-eQTL 5.39e-01 -0.0214 0.0347 0.586 B_Memory L2
ENSG00000075188 NUP37 -463700 sc-eQTL 6.20e-01 -0.0455 0.0917 0.586 B_Memory L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.35e-02 -0.1 0.0595 0.586 B_Memory L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.58e-01 0.116 0.0816 0.586 B_Memory L2
ENSG00000120800 UTP20 376315 sc-eQTL 9.55e-01 0.00507 0.09 0.586 B_Memory L2
ENSG00000120805 ARL1 248648 sc-eQTL 6.87e-01 0.0361 0.0895 0.586 B_Memory L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 2.76e-01 0.0872 0.0799 0.586 B_Memory L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 7.56e-01 0.0261 0.0839 0.586 B_Memory L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 3.38e-02 -0.183 0.0855 0.586 B_Memory L2
ENSG00000185480 PARPBP -463765 sc-eQTL 9.14e-01 0.00954 0.0884 0.586 B_Memory L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 6.70e-01 0.0343 0.0804 0.586 B_Memory L2
ENSG00000017427 IGF1 -825324 sc-eQTL 4.48e-01 -0.036 0.0473 0.588 B_Naive1 L2
ENSG00000075188 NUP37 -463700 sc-eQTL 4.48e-01 -0.0651 0.0857 0.588 B_Naive1 L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 4.50e-05 -0.179 0.0429 0.588 B_Naive1 L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 5.31e-01 0.0396 0.063 0.588 B_Naive1 L2
ENSG00000120800 UTP20 376315 sc-eQTL 3.89e-01 -0.0645 0.0748 0.588 B_Naive1 L2
ENSG00000120805 ARL1 248648 sc-eQTL 2.48e-01 0.0965 0.0833 0.588 B_Naive1 L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.57e-02 0.121 0.0627 0.588 B_Naive1 L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.83e-01 0.00145 0.0686 0.588 B_Naive1 L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 3.94e-01 -0.0794 0.093 0.588 B_Naive1 L2
ENSG00000185480 PARPBP -463765 sc-eQTL 6.64e-01 -0.0394 0.0906 0.588 B_Naive1 L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 1.86e-01 0.112 0.0846 0.588 B_Naive1 L2
ENSG00000017427 IGF1 -825324 sc-eQTL 3.85e-01 -0.0362 0.0416 0.588 B_Naive2 L2
ENSG00000075188 NUP37 -463700 sc-eQTL 7.83e-01 -0.0236 0.0855 0.588 B_Naive2 L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.61e-03 -0.123 0.045 0.588 B_Naive2 L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 6.72e-01 -0.0301 0.0709 0.588 B_Naive2 L2
ENSG00000120800 UTP20 376315 sc-eQTL 9.18e-01 0.00848 0.0823 0.588 B_Naive2 L2
ENSG00000120805 ARL1 248648 sc-eQTL 2.94e-01 0.0948 0.09 0.588 B_Naive2 L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.93e-01 0.0105 0.0786 0.588 B_Naive2 L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.84e-01 0.0317 0.0779 0.588 B_Naive2 L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 6.46e-01 0.0377 0.082 0.588 B_Naive2 L2
ENSG00000185480 PARPBP -463765 sc-eQTL 6.17e-01 -0.0473 0.0945 0.588 B_Naive2 L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 6.14e-01 -0.0411 0.0815 0.588 B_Naive2 L2
ENSG00000075188 NUP37 -463700 sc-eQTL 8.25e-01 0.0203 0.0916 0.584 CD4_CTL L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.53e-01 -0.0413 0.0917 0.584 CD4_CTL L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.21e-01 -0.098 0.0799 0.584 CD4_CTL L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.40e-02 0.198 0.0871 0.584 CD4_CTL L2
ENSG00000120805 ARL1 248648 sc-eQTL 3.89e-01 -0.0805 0.0933 0.584 CD4_CTL L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.64e-01 0.0153 0.0897 0.584 CD4_CTL L2
ENSG00000075188 NUP37 -463700 sc-eQTL 9.93e-01 0.000604 0.0681 0.588 CD4_Naive L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.13e-01 0.00854 0.0785 0.588 CD4_Naive L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 8.44e-01 0.012 0.0605 0.588 CD4_Naive L2
ENSG00000120800 UTP20 376315 sc-eQTL 3.73e-01 0.0587 0.0658 0.588 CD4_Naive L2
ENSG00000120805 ARL1 248648 sc-eQTL 3.85e-01 0.0621 0.0713 0.588 CD4_Naive L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.48e-01 0.0301 0.0499 0.588 CD4_Naive L2
ENSG00000075188 NUP37 -463700 sc-eQTL 9.35e-01 0.0058 0.0716 0.588 CD4_TCM L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.47e-01 -0.0378 0.0826 0.588 CD4_TCM L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 6.14e-01 -0.0323 0.0639 0.588 CD4_TCM L2
ENSG00000120800 UTP20 376315 sc-eQTL 4.98e-01 -0.0542 0.0799 0.588 CD4_TCM L2
ENSG00000120805 ARL1 248648 sc-eQTL 6.03e-02 0.14 0.0743 0.588 CD4_TCM L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.45e-01 0.0298 0.0491 0.588 CD4_TCM L2
ENSG00000075188 NUP37 -463700 sc-eQTL 7.39e-01 0.0285 0.0854 0.588 CD4_TEM L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 4.35e-01 0.0642 0.0821 0.588 CD4_TEM L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 9.04e-01 -0.00954 0.0792 0.588 CD4_TEM L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.51e-02 -0.164 0.0849 0.588 CD4_TEM L2
ENSG00000120805 ARL1 248648 sc-eQTL 8.62e-02 0.139 0.0804 0.588 CD4_TEM L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 7.45e-01 -0.0236 0.0725 0.588 CD4_TEM L2
ENSG00000075188 NUP37 -463700 sc-eQTL 1.88e-01 -0.105 0.0793 0.588 CD8_CTL L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.69e-01 -0.0349 0.0816 0.588 CD8_CTL L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.84e-01 0.0867 0.065 0.588 CD8_CTL L2
ENSG00000120800 UTP20 376315 sc-eQTL 8.44e-01 -0.0174 0.0883 0.588 CD8_CTL L2
ENSG00000120805 ARL1 248648 sc-eQTL 6.45e-01 0.0403 0.0873 0.588 CD8_CTL L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 7.26e-01 -0.0261 0.0745 0.588 CD8_CTL L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 1.37e-01 0.138 0.0922 0.588 CD8_CTL L2
ENSG00000075188 NUP37 -463700 sc-eQTL 1.88e-01 -0.108 0.082 0.588 CD8_Naive L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 7.60e-01 -0.025 0.0818 0.588 CD8_Naive L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.50e-01 0.0845 0.0732 0.588 CD8_Naive L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.77e-01 0.085 0.0779 0.588 CD8_Naive L2
ENSG00000120805 ARL1 248648 sc-eQTL 9.15e-01 -0.00904 0.0848 0.588 CD8_Naive L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 1.88e-01 0.0734 0.0556 0.588 CD8_Naive L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 3.76e-01 0.0763 0.086 0.588 CD8_Naive L2
ENSG00000075188 NUP37 -463700 sc-eQTL 4.88e-01 0.0632 0.0908 0.581 CD8_TCM L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.58e-01 -0.0361 0.0815 0.581 CD8_TCM L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.33e-01 0.101 0.0841 0.581 CD8_TCM L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.09e-01 0.115 0.0917 0.581 CD8_TCM L2
ENSG00000120805 ARL1 248648 sc-eQTL 8.43e-01 -0.0179 0.0904 0.581 CD8_TCM L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.42e-01 0.0494 0.0809 0.581 CD8_TCM L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 2.18e-01 0.109 0.0879 0.581 CD8_TCM L2
ENSG00000075188 NUP37 -463700 sc-eQTL 3.91e-01 -0.0764 0.0888 0.584 CD8_TEM L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 7.20e-01 0.0302 0.0841 0.584 CD8_TEM L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.54e-01 -0.103 0.0898 0.584 CD8_TEM L2
ENSG00000120800 UTP20 376315 sc-eQTL 8.65e-01 -0.0164 0.0967 0.584 CD8_TEM L2
ENSG00000120805 ARL1 248648 sc-eQTL 9.10e-01 -0.0104 0.0924 0.584 CD8_TEM L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.84e-03 0.21 0.0794 0.584 CD8_TEM L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 8.52e-01 0.0166 0.0891 0.584 CD8_TEM L2
ENSG00000017427 IGF1 -825324 sc-eQTL 9.13e-01 0.00341 0.0313 0.589 MAIT L2
ENSG00000075188 NUP37 -463700 sc-eQTL 1.50e-01 0.126 0.0875 0.589 MAIT L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 5.93e-02 -0.161 0.0849 0.589 MAIT L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 4.25e-01 0.0606 0.0758 0.589 MAIT L2
ENSG00000120800 UTP20 376315 sc-eQTL 8.77e-01 0.0141 0.091 0.589 MAIT L2
ENSG00000120805 ARL1 248648 sc-eQTL 7.58e-01 -0.0286 0.0929 0.589 MAIT L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.88e-01 -0.0109 0.0772 0.589 MAIT L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 3.29e-01 -0.0855 0.0874 0.589 MAIT L2
ENSG00000185480 PARPBP -463765 sc-eQTL 7.91e-02 -0.15 0.0852 0.589 MAIT L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 8.78e-01 -0.0117 0.076 0.589 MAIT L2
ENSG00000075188 NUP37 -463700 sc-eQTL 6.23e-01 0.0471 0.0956 0.589 NK_CD56bright L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.32e-01 0.00595 0.0692 0.589 NK_CD56bright L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 6.09e-02 0.149 0.0793 0.589 NK_CD56bright L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.56e-01 0.055 0.0933 0.589 NK_CD56bright L2
ENSG00000120805 ARL1 248648 sc-eQTL 3.48e-01 0.0856 0.091 0.589 NK_CD56bright L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 9.95e-01 -0.000505 0.0825 0.589 NK_CD56bright L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.57e-01 -0.0386 0.0867 0.589 NK_CD56bright L2
ENSG00000185480 PARPBP -463765 sc-eQTL 4.01e-01 0.077 0.0914 0.589 NK_CD56bright L2
ENSG00000075188 NUP37 -463700 sc-eQTL 5.85e-01 0.0455 0.0832 0.591 NK_CD56dim L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 8.93e-01 -0.0109 0.0813 0.591 NK_CD56dim L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.24e-01 0.0943 0.0611 0.591 NK_CD56dim L2
ENSG00000120800 UTP20 376315 sc-eQTL 7.92e-01 0.0226 0.0854 0.591 NK_CD56dim L2
ENSG00000120805 ARL1 248648 sc-eQTL 1.02e-03 0.268 0.0805 0.591 NK_CD56dim L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 9.25e-01 0.00663 0.0707 0.591 NK_CD56dim L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.16e-01 0.0431 0.0858 0.591 NK_CD56dim L2
ENSG00000185480 PARPBP -463765 sc-eQTL 2.82e-01 0.104 0.0964 0.591 NK_CD56dim L2
ENSG00000075188 NUP37 -463700 sc-eQTL 9.84e-01 0.00175 0.0877 0.591 NK_HLA L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 7.75e-01 -0.0258 0.09 0.591 NK_HLA L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 4.22e-01 0.0581 0.0722 0.591 NK_HLA L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.96e-01 0.0502 0.0945 0.591 NK_HLA L2
ENSG00000120805 ARL1 248648 sc-eQTL 4.59e-01 -0.0717 0.0965 0.591 NK_HLA L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 9.44e-01 0.00636 0.0898 0.591 NK_HLA L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 5.96e-01 0.0489 0.0922 0.591 NK_HLA L2
ENSG00000185480 PARPBP -463765 sc-eQTL 8.39e-01 -0.0184 0.0907 0.591 NK_HLA L2
ENSG00000075188 NUP37 -463700 sc-eQTL 7.10e-01 -0.0318 0.0854 0.591 NK_cytokine L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 3.16e-01 -0.0801 0.0798 0.591 NK_cytokine L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 3.00e-01 0.0629 0.0606 0.591 NK_cytokine L2
ENSG00000120800 UTP20 376315 sc-eQTL 5.95e-01 -0.0451 0.0846 0.591 NK_cytokine L2
ENSG00000120805 ARL1 248648 sc-eQTL 3.71e-01 -0.0762 0.085 0.591 NK_cytokine L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.15e-01 -0.0437 0.067 0.591 NK_cytokine L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 2.55e-01 -0.0995 0.0871 0.591 NK_cytokine L2
ENSG00000185480 PARPBP -463765 sc-eQTL 7.42e-01 0.0311 0.0943 0.591 NK_cytokine L2
ENSG00000017427 IGF1 -825324 sc-eQTL 4.23e-01 -0.0531 0.066 0.596 PB L2
ENSG00000075188 NUP37 -463700 sc-eQTL 6.41e-01 0.0416 0.0891 0.596 PB L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 4.91e-01 -0.0477 0.069 0.596 PB L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.00e-01 -0.127 0.0987 0.596 PB L2
ENSG00000120800 UTP20 376315 sc-eQTL 9.93e-01 -0.00106 0.114 0.596 PB L2
ENSG00000120805 ARL1 248648 sc-eQTL 7.34e-01 -0.0239 0.0701 0.596 PB L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 1.61e-03 -0.25 0.0775 0.596 PB L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.85e-01 -0.00159 0.0822 0.596 PB L2
ENSG00000139351 SYCP3 -83052 sc-eQTL 8.66e-02 -0.163 0.0942 0.596 PB L2
ENSG00000185480 PARPBP -463765 sc-eQTL 2.41e-01 0.103 0.0869 0.596 PB L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 8.64e-01 0.0139 0.0809 0.596 PB L2
ENSG00000017427 IGF1 -825324 sc-eQTL 1.47e-01 -0.0463 0.0318 0.585 Pro_T L2
ENSG00000075188 NUP37 -463700 sc-eQTL 5.14e-02 0.125 0.0638 0.585 Pro_T L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 4.07e-02 -0.174 0.0845 0.585 Pro_T L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.06e-01 -0.0797 0.0629 0.585 Pro_T L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.16e-01 -0.111 0.0898 0.585 Pro_T L2
ENSG00000120805 ARL1 248648 sc-eQTL 8.41e-01 0.0137 0.0682 0.585 Pro_T L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 7.19e-01 0.0267 0.0741 0.585 Pro_T L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.08e-01 -0.00733 0.0635 0.585 Pro_T L2
ENSG00000185480 PARPBP -463765 sc-eQTL 5.48e-01 0.0354 0.0588 0.585 Pro_T L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 8.33e-01 0.0136 0.0644 0.585 Pro_T L2
ENSG00000075188 NUP37 -463700 sc-eQTL 7.36e-02 0.157 0.0871 0.588 Treg L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 7.99e-01 0.0233 0.0913 0.588 Treg L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 6.92e-02 0.145 0.0791 0.588 Treg L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.37e-01 0.103 0.0866 0.588 Treg L2
ENSG00000120805 ARL1 248648 sc-eQTL 2.58e-01 0.102 0.0896 0.588 Treg L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 6.09e-01 0.0374 0.0729 0.588 Treg L2
ENSG00000075188 NUP37 -463700 sc-eQTL 5.59e-01 0.0484 0.0827 0.595 cDC L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.84e-01 -0.00165 0.0807 0.595 cDC L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.96e-01 0.109 0.104 0.595 cDC L2
ENSG00000120800 UTP20 376315 sc-eQTL 1.30e-01 0.143 0.0938 0.595 cDC L2
ENSG00000120805 ARL1 248648 sc-eQTL 2.15e-01 0.121 0.0974 0.595 cDC L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 4.90e-02 0.18 0.0909 0.595 cDC L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 2.96e-01 0.0748 0.0714 0.595 cDC L2
ENSG00000185480 PARPBP -463765 sc-eQTL 8.81e-01 -0.0123 0.0817 0.595 cDC L2
ENSG00000075188 NUP37 -463700 sc-eQTL 3.54e-01 -0.0738 0.0795 0.588 cMono_IL1B L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 4.13e-01 -0.0492 0.06 0.588 cMono_IL1B L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 4.75e-01 -0.057 0.0796 0.588 cMono_IL1B L2
ENSG00000120800 UTP20 376315 sc-eQTL 2.98e-01 0.0933 0.0894 0.588 cMono_IL1B L2
ENSG00000120805 ARL1 248648 sc-eQTL 8.87e-01 0.0114 0.0803 0.588 cMono_IL1B L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.35e-01 0.0145 0.0692 0.588 cMono_IL1B L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 4.58e-01 0.0438 0.0589 0.588 cMono_IL1B L2
ENSG00000075188 NUP37 -463700 sc-eQTL 6.64e-01 0.0378 0.087 0.588 cMono_S100A L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 3.27e-01 -0.0653 0.0666 0.588 cMono_S100A L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 3.38e-01 0.0778 0.081 0.588 cMono_S100A L2
ENSG00000120800 UTP20 376315 sc-eQTL 1.31e-01 0.143 0.0945 0.588 cMono_S100A L2
ENSG00000120805 ARL1 248648 sc-eQTL 4.84e-01 -0.0625 0.0892 0.588 cMono_S100A L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.47e-01 -0.0159 0.0826 0.588 cMono_S100A L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 4.52e-01 0.0485 0.0643 0.588 cMono_S100A L2
ENSG00000075188 NUP37 -463700 sc-eQTL 3.50e-01 0.105 0.113 0.576 gdT L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 1.24e-01 0.163 0.105 0.576 gdT L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 9.79e-01 -0.00215 0.0798 0.576 gdT L2
ENSG00000120800 UTP20 376315 sc-eQTL 9.05e-01 -0.0126 0.105 0.576 gdT L2
ENSG00000120805 ARL1 248648 sc-eQTL 2.88e-01 0.117 0.11 0.576 gdT L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 6.17e-01 -0.0516 0.103 0.576 gdT L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.20e-01 0.052 0.105 0.576 gdT L2
ENSG00000185480 PARPBP -463765 sc-eQTL 7.57e-01 0.0318 0.103 0.576 gdT L2
ENSG00000281344 HELLPAR -541165 sc-eQTL 3.62e-02 -0.196 0.0927 0.576 gdT L2
ENSG00000075188 NUP37 -463700 sc-eQTL 8.74e-01 -0.0142 0.0893 0.593 intMono L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 5.38e-01 0.0503 0.0816 0.593 intMono L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 8.69e-01 -0.0158 0.0959 0.593 intMono L2
ENSG00000120800 UTP20 376315 sc-eQTL 4.17e-01 -0.0729 0.0897 0.593 intMono L2
ENSG00000120805 ARL1 248648 sc-eQTL 5.20e-01 0.0598 0.0928 0.593 intMono L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.27e-01 0.0569 0.0897 0.593 intMono L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 4.07e-01 0.0651 0.0784 0.593 intMono L2
ENSG00000075188 NUP37 -463700 sc-eQTL 1.66e-01 0.122 0.0877 0.588 ncMono L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 9.46e-01 0.00548 0.0813 0.588 ncMono L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.11e-01 0.155 0.0968 0.588 ncMono L2
ENSG00000120800 UTP20 376315 sc-eQTL 1.60e-01 -0.12 0.0847 0.588 ncMono L2
ENSG00000120805 ARL1 248648 sc-eQTL 9.14e-01 -0.00887 0.0819 0.588 ncMono L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 2.30e-01 -0.0945 0.0784 0.588 ncMono L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 1.80e-02 -0.172 0.0723 0.588 ncMono L2
ENSG00000075188 NUP37 -463700 sc-eQTL 3.54e-01 0.0998 0.107 0.607 pDC L2
ENSG00000111666 CHPT1 -40527 sc-eQTL 5.35e-02 -0.18 0.0926 0.607 pDC L2
ENSG00000111670 GNPTAB -174539 sc-eQTL 3.15e-03 0.289 0.0964 0.607 pDC L2
ENSG00000120800 UTP20 376315 sc-eQTL 1.07e-01 0.159 0.098 0.607 pDC L2
ENSG00000120805 ARL1 248648 sc-eQTL 1.01e-01 0.17 0.103 0.607 pDC L2
ENSG00000120860 WASHC3 -405729 sc-eQTL 7.24e-01 -0.0321 0.0906 0.607 pDC L2
ENSG00000136048 DRAM1 -221160 sc-eQTL 3.51e-01 0.0653 0.0699 0.607 pDC L2
ENSG00000185480 PARPBP -463765 sc-eQTL 7.96e-01 0.024 0.093 0.607 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -825324 sc-eQTL 1.81e-01 -0.0582 0.0433 0.588 B_Memory LOneK1K
ENSG00000075188 NUP37 -463700 sc-eQTL 7.06e-01 -0.033 0.0874 0.588 B_Memory LOneK1K
ENSG00000111666 CHPT1 -40527 sc-eQTL 5.94e-05 -0.181 0.0443 0.588 B_Memory LOneK1K
ENSG00000111670 GNPTAB -174539 sc-eQTL 2.87e-01 0.077 0.0721 0.588 B_Memory LOneK1K
ENSG00000120800 UTP20 376315 sc-eQTL 6.26e-01 -0.0364 0.0744 0.588 B_Memory LOneK1K
ENSG00000120805 ARL1 248648 sc-eQTL 9.00e-01 -0.0106 0.0842 0.588 B_Memory LOneK1K
ENSG00000120860 WASHC3 -405729 sc-eQTL 4.24e-01 0.0503 0.0628 0.588 B_Memory LOneK1K
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.08e-01 -0.0387 0.0753 0.588 B_Memory LOneK1K
ENSG00000139351 SYCP3 -83052 sc-eQTL 1.55e-01 -0.123 0.0864 0.588 B_Memory LOneK1K
ENSG00000185480 PARPBP -463765 sc-eQTL 2.44e-01 0.106 0.0905 0.588 B_Memory LOneK1K
ENSG00000281344 HELLPAR -541165 sc-eQTL 6.87e-01 -0.0363 0.09 0.588 B_Memory LOneK1K
ENSG00000017427 IGF1 -825324 sc-eQTL 3.05e-01 -0.0518 0.0504 0.588 B_Naive LOneK1K
ENSG00000075188 NUP37 -463700 sc-eQTL 7.06e-01 -0.0312 0.0826 0.588 B_Naive LOneK1K
ENSG00000111666 CHPT1 -40527 sc-eQTL 1.01e-04 -0.156 0.0394 0.588 B_Naive LOneK1K
ENSG00000111670 GNPTAB -174539 sc-eQTL 7.64e-01 -0.0176 0.0584 0.588 B_Naive LOneK1K
ENSG00000120800 UTP20 376315 sc-eQTL 6.98e-01 -0.0277 0.0715 0.588 B_Naive LOneK1K
ENSG00000120805 ARL1 248648 sc-eQTL 7.30e-02 0.146 0.0809 0.588 B_Naive LOneK1K
ENSG00000120860 WASHC3 -405729 sc-eQTL 1.65e-01 0.0848 0.0608 0.588 B_Naive LOneK1K
ENSG00000136048 DRAM1 -221160 sc-eQTL 8.95e-01 0.00848 0.0641 0.588 B_Naive LOneK1K
ENSG00000139351 SYCP3 -83052 sc-eQTL 5.68e-01 -0.0529 0.0924 0.588 B_Naive LOneK1K
ENSG00000185480 PARPBP -463765 sc-eQTL 7.23e-01 -0.0334 0.0941 0.588 B_Naive LOneK1K
ENSG00000281344 HELLPAR -541165 sc-eQTL 8.45e-01 -0.0168 0.0857 0.588 B_Naive LOneK1K
ENSG00000075188 NUP37 -463700 sc-eQTL 4.82e-01 -0.0514 0.073 0.588 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -40527 sc-eQTL 3.79e-01 -0.052 0.059 0.588 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -174539 sc-eQTL 8.23e-01 0.017 0.0761 0.588 CD14_Mono LOneK1K
ENSG00000120800 UTP20 376315 sc-eQTL 1.01e-01 0.147 0.0894 0.588 CD14_Mono LOneK1K
ENSG00000120805 ARL1 248648 sc-eQTL 7.95e-01 -0.02 0.0769 0.588 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -405729 sc-eQTL 5.11e-01 0.044 0.0669 0.588 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -221160 sc-eQTL 6.81e-01 0.0226 0.0549 0.588 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -463700 sc-eQTL 2.62e-01 0.0943 0.0839 0.591 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -40527 sc-eQTL 5.15e-01 0.0478 0.0734 0.591 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -174539 sc-eQTL 7.90e-01 -0.0237 0.089 0.591 CD16_Mono LOneK1K
ENSG00000120800 UTP20 376315 sc-eQTL 1.08e-01 -0.137 0.085 0.591 CD16_Mono LOneK1K
ENSG00000120805 ARL1 248648 sc-eQTL 4.30e-01 0.0671 0.0849 0.591 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -405729 sc-eQTL 4.08e-01 -0.0611 0.0737 0.591 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -221160 sc-eQTL 1.22e-01 -0.0982 0.0633 0.591 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -463700 sc-eQTL 4.69e-01 0.0577 0.0796 0.591 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -40527 sc-eQTL 6.41e-01 -0.0363 0.0777 0.591 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -174539 sc-eQTL 1.15e-01 0.0837 0.053 0.591 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 376315 sc-eQTL 6.07e-01 -0.042 0.0817 0.591 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 248648 sc-eQTL 1.36e-01 0.113 0.0754 0.591 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -405729 sc-eQTL 8.91e-01 0.00839 0.0614 0.591 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -221160 sc-eQTL 9.02e-01 0.0102 0.0825 0.591 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -463765 sc-eQTL 3.62e-01 0.0885 0.0969 0.591 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -40527 eQTL 3.92e-04 0.0877 0.0247 0.0 0.0 0.41

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -40527 7.88e-06 9.82e-06 1.23e-06 5.03e-06 2.14e-06 3.88e-06 1.03e-05 1.69e-06 8.41e-06 4.24e-06 1.06e-05 5.16e-06 1.38e-05 3.95e-06 1.91e-06 5.1e-06 3.83e-06 5.78e-06 2.48e-06 2.83e-06 4.49e-06 8e-06 7.23e-06 3.21e-06 1.3e-05 2.79e-06 4.22e-06 2.84e-06 8.26e-06 9.25e-06 5.14e-06 8.06e-07 7.36e-07 2.83e-06 4.27e-06 2.09e-06 1.57e-06 1.84e-06 1.6e-06 1e-06 8.93e-07 1.16e-05 1.14e-06 2.03e-07 6.81e-07 1.03e-06 9.51e-07 6.91e-07 5.08e-07