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Genes within 1Mb (chr12:101650377:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -831367 sc-eQTL 4.67e-01 0.0274 0.0376 0.412 B L1
ENSG00000075188 NUP37 -469743 sc-eQTL 9.53e-01 -0.0039 0.0655 0.412 B L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 2.04e-05 0.166 0.0381 0.412 B L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 7.27e-01 -0.0201 0.0576 0.412 B L1
ENSG00000120800 UTP20 370272 sc-eQTL 5.81e-01 0.0362 0.0655 0.412 B L1
ENSG00000120805 ARL1 242605 sc-eQTL 8.19e-02 -0.0977 0.0559 0.412 B L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 1.22e-01 -0.0695 0.0448 0.412 B L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 7.38e-01 0.0171 0.0511 0.412 B L1
ENSG00000139351 SYCP3 -89095 sc-eQTL 4.46e-01 0.0619 0.0811 0.412 B L1
ENSG00000185480 PARPBP -469808 sc-eQTL 5.82e-01 -0.0428 0.0777 0.412 B L1
ENSG00000281344 HELLPAR -547208 sc-eQTL 6.31e-01 0.0349 0.0725 0.412 B L1
ENSG00000075188 NUP37 -469743 sc-eQTL 9.46e-01 -0.00399 0.059 0.412 CD4T L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 8.69e-01 0.0132 0.0797 0.412 CD4T L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 7.63e-01 0.0167 0.0552 0.412 CD4T L1
ENSG00000120800 UTP20 370272 sc-eQTL 5.72e-01 -0.0346 0.061 0.412 CD4T L1
ENSG00000120805 ARL1 242605 sc-eQTL 4.51e-02 -0.119 0.0592 0.412 CD4T L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 4.08e-01 -0.0346 0.0417 0.412 CD4T L1
ENSG00000075188 NUP37 -469743 sc-eQTL 2.37e-01 0.0875 0.0737 0.412 CD8T L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.57e-01 0.0356 0.0801 0.412 CD8T L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.34e-01 -0.0786 0.0523 0.412 CD8T L1
ENSG00000120800 UTP20 370272 sc-eQTL 6.59e-01 -0.0293 0.0664 0.412 CD8T L1
ENSG00000120805 ARL1 242605 sc-eQTL 9.95e-01 -0.00047 0.0732 0.412 CD8T L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 2.13e-01 -0.0648 0.0518 0.412 CD8T L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 2.07e-01 -0.0939 0.0743 0.412 CD8T L1
ENSG00000075188 NUP37 -469743 sc-eQTL 3.35e-01 -0.082 0.0849 0.41 DC L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 3.41e-01 0.0741 0.0776 0.41 DC L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 4.60e-02 -0.17 0.0847 0.41 DC L1
ENSG00000120800 UTP20 370272 sc-eQTL 5.01e-01 -0.0618 0.0916 0.41 DC L1
ENSG00000120805 ARL1 242605 sc-eQTL 6.89e-02 -0.172 0.0941 0.41 DC L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.48e-01 -0.0491 0.0816 0.41 DC L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 1.05e-01 -0.109 0.067 0.41 DC L1
ENSG00000185480 PARPBP -469808 sc-eQTL 6.46e-01 -0.0409 0.0888 0.41 DC L1
ENSG00000075188 NUP37 -469743 sc-eQTL 9.99e-01 8.57e-05 0.0697 0.412 Mono L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 7.92e-01 0.0156 0.059 0.412 Mono L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 9.03e-01 -0.00906 0.074 0.412 Mono L1
ENSG00000120800 UTP20 370272 sc-eQTL 3.49e-01 -0.0774 0.0823 0.412 Mono L1
ENSG00000120805 ARL1 242605 sc-eQTL 8.35e-01 0.0159 0.0759 0.412 Mono L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 9.02e-01 -0.00825 0.0668 0.412 Mono L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.16e-01 0.00577 0.0545 0.412 Mono L1
ENSG00000075188 NUP37 -469743 sc-eQTL 3.53e-01 -0.0704 0.0756 0.41 NK L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 8.39e-01 0.0143 0.0704 0.41 NK L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.26e-01 -0.0779 0.0507 0.41 NK L1
ENSG00000120800 UTP20 370272 sc-eQTL 8.84e-01 0.012 0.0821 0.41 NK L1
ENSG00000120805 ARL1 242605 sc-eQTL 1.91e-01 -0.0985 0.0751 0.41 NK L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.56e-01 0.0103 0.0569 0.41 NK L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.62e-01 -0.00386 0.0809 0.41 NK L1
ENSG00000185480 PARPBP -469808 sc-eQTL 1.36e-01 -0.141 0.0944 0.41 NK L1
ENSG00000017427 IGF1 -831367 sc-eQTL 2.25e-01 0.035 0.0288 0.412 Other_T L1
ENSG00000075188 NUP37 -469743 sc-eQTL 3.47e-01 -0.0517 0.0549 0.412 Other_T L1
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.67e-02 0.147 0.0797 0.412 Other_T L1
ENSG00000111670 GNPTAB -180582 sc-eQTL 8.90e-01 0.00802 0.0579 0.412 Other_T L1
ENSG00000120800 UTP20 370272 sc-eQTL 6.76e-01 0.0379 0.0905 0.412 Other_T L1
ENSG00000120805 ARL1 242605 sc-eQTL 7.30e-01 0.0228 0.066 0.412 Other_T L1
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.65e-01 -0.00998 0.0586 0.412 Other_T L1
ENSG00000136048 DRAM1 -227203 sc-eQTL 7.81e-01 0.0196 0.0703 0.412 Other_T L1
ENSG00000185480 PARPBP -469808 sc-eQTL 3.21e-01 0.0581 0.0585 0.412 Other_T L1
ENSG00000281344 HELLPAR -547208 sc-eQTL 1.74e-01 0.0926 0.0678 0.412 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -831367 sc-eQTL 2.28e-01 0.0219 0.0181 0.403 B_Activated L2
ENSG00000075188 NUP37 -469743 sc-eQTL 4.34e-01 0.0739 0.0942 0.403 B_Activated L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 1.00e-04 0.266 0.0668 0.403 B_Activated L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 8.86e-01 -0.0142 0.0991 0.403 B_Activated L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.69e-01 -0.0547 0.0958 0.403 B_Activated L2
ENSG00000120805 ARL1 242605 sc-eQTL 6.73e-01 -0.0418 0.099 0.403 B_Activated L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 1.21e-01 -0.146 0.0937 0.403 B_Activated L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 8.32e-01 0.0202 0.0947 0.403 B_Activated L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 5.96e-02 0.146 0.077 0.403 B_Activated L2
ENSG00000185480 PARPBP -469808 sc-eQTL 8.65e-02 -0.134 0.0776 0.403 B_Activated L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 9.57e-01 0.00394 0.0736 0.403 B_Activated L2
ENSG00000017427 IGF1 -831367 sc-eQTL 1.94e-01 0.0482 0.037 0.412 B_Intermediate L2
ENSG00000075188 NUP37 -469743 sc-eQTL 9.14e-01 0.00998 0.0925 0.412 B_Intermediate L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.78e-06 0.215 0.0474 0.412 B_Intermediate L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 5.05e-01 -0.049 0.0733 0.412 B_Intermediate L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.96e-01 0.0432 0.0815 0.412 B_Intermediate L2
ENSG00000120805 ARL1 242605 sc-eQTL 7.90e-01 0.0244 0.0918 0.412 B_Intermediate L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 7.05e-01 -0.0287 0.0758 0.412 B_Intermediate L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 3.87e-01 0.0705 0.0812 0.412 B_Intermediate L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 1.94e-01 0.111 0.0852 0.412 B_Intermediate L2
ENSG00000185480 PARPBP -469808 sc-eQTL 1.17e-01 -0.14 0.0893 0.412 B_Intermediate L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 6.52e-01 0.0388 0.0861 0.412 B_Intermediate L2
ENSG00000017427 IGF1 -831367 sc-eQTL 5.39e-01 0.0214 0.0347 0.414 B_Memory L2
ENSG00000075188 NUP37 -469743 sc-eQTL 6.20e-01 0.0455 0.0917 0.414 B_Memory L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.35e-02 0.1 0.0595 0.414 B_Memory L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.58e-01 -0.116 0.0816 0.414 B_Memory L2
ENSG00000120800 UTP20 370272 sc-eQTL 9.55e-01 -0.00507 0.09 0.414 B_Memory L2
ENSG00000120805 ARL1 242605 sc-eQTL 6.87e-01 -0.0361 0.0895 0.414 B_Memory L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 2.76e-01 -0.0872 0.0799 0.414 B_Memory L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 7.56e-01 -0.0261 0.0839 0.414 B_Memory L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 3.38e-02 0.183 0.0855 0.414 B_Memory L2
ENSG00000185480 PARPBP -469808 sc-eQTL 9.14e-01 -0.00954 0.0884 0.414 B_Memory L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 6.70e-01 -0.0343 0.0804 0.414 B_Memory L2
ENSG00000017427 IGF1 -831367 sc-eQTL 4.48e-01 0.036 0.0473 0.412 B_Naive1 L2
ENSG00000075188 NUP37 -469743 sc-eQTL 4.48e-01 0.0651 0.0857 0.412 B_Naive1 L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 4.50e-05 0.179 0.0429 0.412 B_Naive1 L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 5.31e-01 -0.0396 0.063 0.412 B_Naive1 L2
ENSG00000120800 UTP20 370272 sc-eQTL 3.89e-01 0.0645 0.0748 0.412 B_Naive1 L2
ENSG00000120805 ARL1 242605 sc-eQTL 2.48e-01 -0.0965 0.0833 0.412 B_Naive1 L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.57e-02 -0.121 0.0627 0.412 B_Naive1 L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.83e-01 -0.00145 0.0686 0.412 B_Naive1 L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 3.94e-01 0.0794 0.093 0.412 B_Naive1 L2
ENSG00000185480 PARPBP -469808 sc-eQTL 6.64e-01 0.0394 0.0906 0.412 B_Naive1 L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 1.86e-01 -0.112 0.0846 0.412 B_Naive1 L2
ENSG00000017427 IGF1 -831367 sc-eQTL 3.85e-01 0.0362 0.0416 0.412 B_Naive2 L2
ENSG00000075188 NUP37 -469743 sc-eQTL 7.83e-01 0.0236 0.0855 0.412 B_Naive2 L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.61e-03 0.123 0.045 0.412 B_Naive2 L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 6.72e-01 0.0301 0.0709 0.412 B_Naive2 L2
ENSG00000120800 UTP20 370272 sc-eQTL 9.18e-01 -0.00848 0.0823 0.412 B_Naive2 L2
ENSG00000120805 ARL1 242605 sc-eQTL 2.94e-01 -0.0948 0.09 0.412 B_Naive2 L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.93e-01 -0.0105 0.0786 0.412 B_Naive2 L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.84e-01 -0.0317 0.0779 0.412 B_Naive2 L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 6.46e-01 -0.0377 0.082 0.412 B_Naive2 L2
ENSG00000185480 PARPBP -469808 sc-eQTL 6.17e-01 0.0473 0.0945 0.412 B_Naive2 L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 6.14e-01 0.0411 0.0815 0.412 B_Naive2 L2
ENSG00000075188 NUP37 -469743 sc-eQTL 8.25e-01 -0.0203 0.0916 0.416 CD4_CTL L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.53e-01 0.0413 0.0917 0.416 CD4_CTL L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.21e-01 0.098 0.0799 0.416 CD4_CTL L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.40e-02 -0.198 0.0871 0.416 CD4_CTL L2
ENSG00000120805 ARL1 242605 sc-eQTL 3.89e-01 0.0805 0.0933 0.416 CD4_CTL L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.64e-01 -0.0153 0.0897 0.416 CD4_CTL L2
ENSG00000075188 NUP37 -469743 sc-eQTL 9.93e-01 -0.000604 0.0681 0.412 CD4_Naive L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.13e-01 -0.00854 0.0785 0.412 CD4_Naive L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 8.44e-01 -0.012 0.0605 0.412 CD4_Naive L2
ENSG00000120800 UTP20 370272 sc-eQTL 3.73e-01 -0.0587 0.0658 0.412 CD4_Naive L2
ENSG00000120805 ARL1 242605 sc-eQTL 3.85e-01 -0.0621 0.0713 0.412 CD4_Naive L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.48e-01 -0.0301 0.0499 0.412 CD4_Naive L2
ENSG00000075188 NUP37 -469743 sc-eQTL 9.35e-01 -0.0058 0.0716 0.412 CD4_TCM L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.47e-01 0.0378 0.0826 0.412 CD4_TCM L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 6.14e-01 0.0323 0.0639 0.412 CD4_TCM L2
ENSG00000120800 UTP20 370272 sc-eQTL 4.98e-01 0.0542 0.0799 0.412 CD4_TCM L2
ENSG00000120805 ARL1 242605 sc-eQTL 6.03e-02 -0.14 0.0743 0.412 CD4_TCM L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.45e-01 -0.0298 0.0491 0.412 CD4_TCM L2
ENSG00000075188 NUP37 -469743 sc-eQTL 7.39e-01 -0.0285 0.0854 0.412 CD4_TEM L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 4.35e-01 -0.0642 0.0821 0.412 CD4_TEM L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 9.04e-01 0.00954 0.0792 0.412 CD4_TEM L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.51e-02 0.164 0.0849 0.412 CD4_TEM L2
ENSG00000120805 ARL1 242605 sc-eQTL 8.62e-02 -0.139 0.0804 0.412 CD4_TEM L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 7.45e-01 0.0236 0.0725 0.412 CD4_TEM L2
ENSG00000075188 NUP37 -469743 sc-eQTL 1.88e-01 0.105 0.0793 0.412 CD8_CTL L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.69e-01 0.0349 0.0816 0.412 CD8_CTL L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.84e-01 -0.0867 0.065 0.412 CD8_CTL L2
ENSG00000120800 UTP20 370272 sc-eQTL 8.44e-01 0.0174 0.0883 0.412 CD8_CTL L2
ENSG00000120805 ARL1 242605 sc-eQTL 6.45e-01 -0.0403 0.0873 0.412 CD8_CTL L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 7.26e-01 0.0261 0.0745 0.412 CD8_CTL L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 1.37e-01 -0.138 0.0922 0.412 CD8_CTL L2
ENSG00000075188 NUP37 -469743 sc-eQTL 1.88e-01 0.108 0.082 0.412 CD8_Naive L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 7.60e-01 0.025 0.0818 0.412 CD8_Naive L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.50e-01 -0.0845 0.0732 0.412 CD8_Naive L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.77e-01 -0.085 0.0779 0.412 CD8_Naive L2
ENSG00000120805 ARL1 242605 sc-eQTL 9.15e-01 0.00904 0.0848 0.412 CD8_Naive L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 1.88e-01 -0.0734 0.0556 0.412 CD8_Naive L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 3.76e-01 -0.0763 0.086 0.412 CD8_Naive L2
ENSG00000075188 NUP37 -469743 sc-eQTL 4.88e-01 -0.0632 0.0908 0.419 CD8_TCM L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.58e-01 0.0361 0.0815 0.419 CD8_TCM L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.33e-01 -0.101 0.0841 0.419 CD8_TCM L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.09e-01 -0.115 0.0917 0.419 CD8_TCM L2
ENSG00000120805 ARL1 242605 sc-eQTL 8.43e-01 0.0179 0.0904 0.419 CD8_TCM L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.42e-01 -0.0494 0.0809 0.419 CD8_TCM L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 2.18e-01 -0.109 0.0879 0.419 CD8_TCM L2
ENSG00000075188 NUP37 -469743 sc-eQTL 3.91e-01 0.0764 0.0888 0.416 CD8_TEM L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 7.20e-01 -0.0302 0.0841 0.416 CD8_TEM L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.54e-01 0.103 0.0898 0.416 CD8_TEM L2
ENSG00000120800 UTP20 370272 sc-eQTL 8.65e-01 0.0164 0.0967 0.416 CD8_TEM L2
ENSG00000120805 ARL1 242605 sc-eQTL 9.10e-01 0.0104 0.0924 0.416 CD8_TEM L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.84e-03 -0.21 0.0794 0.416 CD8_TEM L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 8.52e-01 -0.0166 0.0891 0.416 CD8_TEM L2
ENSG00000017427 IGF1 -831367 sc-eQTL 9.13e-01 -0.00341 0.0313 0.411 MAIT L2
ENSG00000075188 NUP37 -469743 sc-eQTL 1.50e-01 -0.126 0.0875 0.411 MAIT L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 5.93e-02 0.161 0.0849 0.411 MAIT L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 4.25e-01 -0.0606 0.0758 0.411 MAIT L2
ENSG00000120800 UTP20 370272 sc-eQTL 8.77e-01 -0.0141 0.091 0.411 MAIT L2
ENSG00000120805 ARL1 242605 sc-eQTL 7.58e-01 0.0286 0.0929 0.411 MAIT L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.88e-01 0.0109 0.0772 0.411 MAIT L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 3.29e-01 0.0855 0.0874 0.411 MAIT L2
ENSG00000185480 PARPBP -469808 sc-eQTL 7.91e-02 0.15 0.0852 0.411 MAIT L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 8.78e-01 0.0117 0.076 0.411 MAIT L2
ENSG00000075188 NUP37 -469743 sc-eQTL 6.23e-01 -0.0471 0.0956 0.411 NK_CD56bright L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.32e-01 -0.00595 0.0692 0.411 NK_CD56bright L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 6.09e-02 -0.149 0.0793 0.411 NK_CD56bright L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.56e-01 -0.055 0.0933 0.411 NK_CD56bright L2
ENSG00000120805 ARL1 242605 sc-eQTL 3.48e-01 -0.0856 0.091 0.411 NK_CD56bright L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 9.95e-01 0.000505 0.0825 0.411 NK_CD56bright L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.57e-01 0.0386 0.0867 0.411 NK_CD56bright L2
ENSG00000185480 PARPBP -469808 sc-eQTL 4.01e-01 -0.077 0.0914 0.411 NK_CD56bright L2
ENSG00000075188 NUP37 -469743 sc-eQTL 5.85e-01 -0.0455 0.0832 0.409 NK_CD56dim L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 8.93e-01 0.0109 0.0813 0.409 NK_CD56dim L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.24e-01 -0.0943 0.0611 0.409 NK_CD56dim L2
ENSG00000120800 UTP20 370272 sc-eQTL 7.92e-01 -0.0226 0.0854 0.409 NK_CD56dim L2
ENSG00000120805 ARL1 242605 sc-eQTL 1.02e-03 -0.268 0.0805 0.409 NK_CD56dim L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 9.25e-01 -0.00663 0.0707 0.409 NK_CD56dim L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.16e-01 -0.0431 0.0858 0.409 NK_CD56dim L2
ENSG00000185480 PARPBP -469808 sc-eQTL 2.82e-01 -0.104 0.0964 0.409 NK_CD56dim L2
ENSG00000075188 NUP37 -469743 sc-eQTL 9.84e-01 -0.00175 0.0877 0.409 NK_HLA L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 7.75e-01 0.0258 0.09 0.409 NK_HLA L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 4.22e-01 -0.0581 0.0722 0.409 NK_HLA L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.96e-01 -0.0502 0.0945 0.409 NK_HLA L2
ENSG00000120805 ARL1 242605 sc-eQTL 4.59e-01 0.0717 0.0965 0.409 NK_HLA L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 9.44e-01 -0.00636 0.0898 0.409 NK_HLA L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 5.96e-01 -0.0489 0.0922 0.409 NK_HLA L2
ENSG00000185480 PARPBP -469808 sc-eQTL 8.39e-01 0.0184 0.0907 0.409 NK_HLA L2
ENSG00000075188 NUP37 -469743 sc-eQTL 7.10e-01 0.0318 0.0854 0.409 NK_cytokine L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 3.16e-01 0.0801 0.0798 0.409 NK_cytokine L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 3.00e-01 -0.0629 0.0606 0.409 NK_cytokine L2
ENSG00000120800 UTP20 370272 sc-eQTL 5.95e-01 0.0451 0.0846 0.409 NK_cytokine L2
ENSG00000120805 ARL1 242605 sc-eQTL 3.71e-01 0.0762 0.085 0.409 NK_cytokine L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.15e-01 0.0437 0.067 0.409 NK_cytokine L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 2.55e-01 0.0995 0.0871 0.409 NK_cytokine L2
ENSG00000185480 PARPBP -469808 sc-eQTL 7.42e-01 -0.0311 0.0943 0.409 NK_cytokine L2
ENSG00000017427 IGF1 -831367 sc-eQTL 4.23e-01 0.0531 0.066 0.404 PB L2
ENSG00000075188 NUP37 -469743 sc-eQTL 6.41e-01 -0.0416 0.0891 0.404 PB L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 4.91e-01 0.0477 0.069 0.404 PB L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.00e-01 0.127 0.0987 0.404 PB L2
ENSG00000120800 UTP20 370272 sc-eQTL 9.93e-01 0.00106 0.114 0.404 PB L2
ENSG00000120805 ARL1 242605 sc-eQTL 7.34e-01 0.0239 0.0701 0.404 PB L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 1.61e-03 0.25 0.0775 0.404 PB L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.85e-01 0.00159 0.0822 0.404 PB L2
ENSG00000139351 SYCP3 -89095 sc-eQTL 8.66e-02 0.163 0.0942 0.404 PB L2
ENSG00000185480 PARPBP -469808 sc-eQTL 2.41e-01 -0.103 0.0869 0.404 PB L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 8.64e-01 -0.0139 0.0809 0.404 PB L2
ENSG00000017427 IGF1 -831367 sc-eQTL 1.47e-01 0.0463 0.0318 0.415 Pro_T L2
ENSG00000075188 NUP37 -469743 sc-eQTL 5.14e-02 -0.125 0.0638 0.415 Pro_T L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 4.07e-02 0.174 0.0845 0.415 Pro_T L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.06e-01 0.0797 0.0629 0.415 Pro_T L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.16e-01 0.111 0.0898 0.415 Pro_T L2
ENSG00000120805 ARL1 242605 sc-eQTL 8.41e-01 -0.0137 0.0682 0.415 Pro_T L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 7.19e-01 -0.0267 0.0741 0.415 Pro_T L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.08e-01 0.00733 0.0635 0.415 Pro_T L2
ENSG00000185480 PARPBP -469808 sc-eQTL 5.48e-01 -0.0354 0.0588 0.415 Pro_T L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 8.33e-01 -0.0136 0.0644 0.415 Pro_T L2
ENSG00000075188 NUP37 -469743 sc-eQTL 7.36e-02 -0.157 0.0871 0.412 Treg L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 7.99e-01 -0.0233 0.0913 0.412 Treg L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 6.92e-02 -0.145 0.0791 0.412 Treg L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.37e-01 -0.103 0.0866 0.412 Treg L2
ENSG00000120805 ARL1 242605 sc-eQTL 2.58e-01 -0.102 0.0896 0.412 Treg L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 6.09e-01 -0.0374 0.0729 0.412 Treg L2
ENSG00000075188 NUP37 -469743 sc-eQTL 5.59e-01 -0.0484 0.0827 0.405 cDC L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.84e-01 0.00165 0.0807 0.405 cDC L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.96e-01 -0.109 0.104 0.405 cDC L2
ENSG00000120800 UTP20 370272 sc-eQTL 1.30e-01 -0.143 0.0938 0.405 cDC L2
ENSG00000120805 ARL1 242605 sc-eQTL 2.15e-01 -0.121 0.0974 0.405 cDC L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 4.90e-02 -0.18 0.0909 0.405 cDC L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 2.96e-01 -0.0748 0.0714 0.405 cDC L2
ENSG00000185480 PARPBP -469808 sc-eQTL 8.81e-01 0.0123 0.0817 0.405 cDC L2
ENSG00000075188 NUP37 -469743 sc-eQTL 3.54e-01 0.0738 0.0795 0.412 cMono_IL1B L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 4.13e-01 0.0492 0.06 0.412 cMono_IL1B L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 4.75e-01 0.057 0.0796 0.412 cMono_IL1B L2
ENSG00000120800 UTP20 370272 sc-eQTL 2.98e-01 -0.0933 0.0894 0.412 cMono_IL1B L2
ENSG00000120805 ARL1 242605 sc-eQTL 8.87e-01 -0.0114 0.0803 0.412 cMono_IL1B L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.35e-01 -0.0145 0.0692 0.412 cMono_IL1B L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 4.58e-01 -0.0438 0.0589 0.412 cMono_IL1B L2
ENSG00000075188 NUP37 -469743 sc-eQTL 6.64e-01 -0.0378 0.087 0.412 cMono_S100A L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 3.27e-01 0.0653 0.0666 0.412 cMono_S100A L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 3.38e-01 -0.0778 0.081 0.412 cMono_S100A L2
ENSG00000120800 UTP20 370272 sc-eQTL 1.31e-01 -0.143 0.0945 0.412 cMono_S100A L2
ENSG00000120805 ARL1 242605 sc-eQTL 4.84e-01 0.0625 0.0892 0.412 cMono_S100A L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.47e-01 0.0159 0.0826 0.412 cMono_S100A L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 4.52e-01 -0.0485 0.0643 0.412 cMono_S100A L2
ENSG00000075188 NUP37 -469743 sc-eQTL 3.50e-01 -0.105 0.113 0.424 gdT L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 1.24e-01 -0.163 0.105 0.424 gdT L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 9.79e-01 0.00215 0.0798 0.424 gdT L2
ENSG00000120800 UTP20 370272 sc-eQTL 9.05e-01 0.0126 0.105 0.424 gdT L2
ENSG00000120805 ARL1 242605 sc-eQTL 2.88e-01 -0.117 0.11 0.424 gdT L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 6.17e-01 0.0516 0.103 0.424 gdT L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.20e-01 -0.052 0.105 0.424 gdT L2
ENSG00000185480 PARPBP -469808 sc-eQTL 7.57e-01 -0.0318 0.103 0.424 gdT L2
ENSG00000281344 HELLPAR -547208 sc-eQTL 3.62e-02 0.196 0.0927 0.424 gdT L2
ENSG00000075188 NUP37 -469743 sc-eQTL 8.74e-01 0.0142 0.0893 0.407 intMono L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 5.38e-01 -0.0503 0.0816 0.407 intMono L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 8.69e-01 0.0158 0.0959 0.407 intMono L2
ENSG00000120800 UTP20 370272 sc-eQTL 4.17e-01 0.0729 0.0897 0.407 intMono L2
ENSG00000120805 ARL1 242605 sc-eQTL 5.20e-01 -0.0598 0.0928 0.407 intMono L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.27e-01 -0.0569 0.0897 0.407 intMono L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 4.07e-01 -0.0651 0.0784 0.407 intMono L2
ENSG00000075188 NUP37 -469743 sc-eQTL 1.66e-01 -0.122 0.0877 0.412 ncMono L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 9.46e-01 -0.00548 0.0813 0.412 ncMono L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.11e-01 -0.155 0.0968 0.412 ncMono L2
ENSG00000120800 UTP20 370272 sc-eQTL 1.60e-01 0.12 0.0847 0.412 ncMono L2
ENSG00000120805 ARL1 242605 sc-eQTL 9.14e-01 0.00887 0.0819 0.412 ncMono L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 2.30e-01 0.0945 0.0784 0.412 ncMono L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 1.80e-02 0.172 0.0723 0.412 ncMono L2
ENSG00000075188 NUP37 -469743 sc-eQTL 3.54e-01 -0.0998 0.107 0.393 pDC L2
ENSG00000111666 CHPT1 -46570 sc-eQTL 5.35e-02 0.18 0.0926 0.393 pDC L2
ENSG00000111670 GNPTAB -180582 sc-eQTL 3.15e-03 -0.289 0.0964 0.393 pDC L2
ENSG00000120800 UTP20 370272 sc-eQTL 1.07e-01 -0.159 0.098 0.393 pDC L2
ENSG00000120805 ARL1 242605 sc-eQTL 1.01e-01 -0.17 0.103 0.393 pDC L2
ENSG00000120860 WASHC3 -411772 sc-eQTL 7.24e-01 0.0321 0.0906 0.393 pDC L2
ENSG00000136048 DRAM1 -227203 sc-eQTL 3.51e-01 -0.0653 0.0699 0.393 pDC L2
ENSG00000185480 PARPBP -469808 sc-eQTL 7.96e-01 -0.024 0.093 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -831367 sc-eQTL 1.81e-01 0.0582 0.0433 0.412 B_Memory LOneK1K
ENSG00000075188 NUP37 -469743 sc-eQTL 7.06e-01 0.033 0.0874 0.412 B_Memory LOneK1K
ENSG00000111666 CHPT1 -46570 sc-eQTL 5.94e-05 0.181 0.0443 0.412 B_Memory LOneK1K
ENSG00000111670 GNPTAB -180582 sc-eQTL 2.87e-01 -0.077 0.0721 0.412 B_Memory LOneK1K
ENSG00000120800 UTP20 370272 sc-eQTL 6.26e-01 0.0364 0.0744 0.412 B_Memory LOneK1K
ENSG00000120805 ARL1 242605 sc-eQTL 9.00e-01 0.0106 0.0842 0.412 B_Memory LOneK1K
ENSG00000120860 WASHC3 -411772 sc-eQTL 4.24e-01 -0.0503 0.0628 0.412 B_Memory LOneK1K
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.08e-01 0.0387 0.0753 0.412 B_Memory LOneK1K
ENSG00000139351 SYCP3 -89095 sc-eQTL 1.55e-01 0.123 0.0864 0.412 B_Memory LOneK1K
ENSG00000185480 PARPBP -469808 sc-eQTL 2.44e-01 -0.106 0.0905 0.412 B_Memory LOneK1K
ENSG00000281344 HELLPAR -547208 sc-eQTL 6.87e-01 0.0363 0.09 0.412 B_Memory LOneK1K
ENSG00000017427 IGF1 -831367 sc-eQTL 3.05e-01 0.0518 0.0504 0.412 B_Naive LOneK1K
ENSG00000075188 NUP37 -469743 sc-eQTL 7.06e-01 0.0312 0.0826 0.412 B_Naive LOneK1K
ENSG00000111666 CHPT1 -46570 sc-eQTL 1.01e-04 0.156 0.0394 0.412 B_Naive LOneK1K
ENSG00000111670 GNPTAB -180582 sc-eQTL 7.64e-01 0.0176 0.0584 0.412 B_Naive LOneK1K
ENSG00000120800 UTP20 370272 sc-eQTL 6.98e-01 0.0277 0.0715 0.412 B_Naive LOneK1K
ENSG00000120805 ARL1 242605 sc-eQTL 7.30e-02 -0.146 0.0809 0.412 B_Naive LOneK1K
ENSG00000120860 WASHC3 -411772 sc-eQTL 1.65e-01 -0.0848 0.0608 0.412 B_Naive LOneK1K
ENSG00000136048 DRAM1 -227203 sc-eQTL 8.95e-01 -0.00848 0.0641 0.412 B_Naive LOneK1K
ENSG00000139351 SYCP3 -89095 sc-eQTL 5.68e-01 0.0529 0.0924 0.412 B_Naive LOneK1K
ENSG00000185480 PARPBP -469808 sc-eQTL 7.23e-01 0.0334 0.0941 0.412 B_Naive LOneK1K
ENSG00000281344 HELLPAR -547208 sc-eQTL 8.45e-01 0.0168 0.0857 0.412 B_Naive LOneK1K
ENSG00000075188 NUP37 -469743 sc-eQTL 4.82e-01 0.0514 0.073 0.412 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -46570 sc-eQTL 3.79e-01 0.052 0.059 0.412 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -180582 sc-eQTL 8.23e-01 -0.017 0.0761 0.412 CD14_Mono LOneK1K
ENSG00000120800 UTP20 370272 sc-eQTL 1.01e-01 -0.147 0.0894 0.412 CD14_Mono LOneK1K
ENSG00000120805 ARL1 242605 sc-eQTL 7.95e-01 0.02 0.0769 0.412 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -411772 sc-eQTL 5.11e-01 -0.044 0.0669 0.412 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -227203 sc-eQTL 6.81e-01 -0.0226 0.0549 0.412 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -469743 sc-eQTL 2.62e-01 -0.0943 0.0839 0.409 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -46570 sc-eQTL 5.15e-01 -0.0478 0.0734 0.409 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -180582 sc-eQTL 7.90e-01 0.0237 0.089 0.409 CD16_Mono LOneK1K
ENSG00000120800 UTP20 370272 sc-eQTL 1.08e-01 0.137 0.085 0.409 CD16_Mono LOneK1K
ENSG00000120805 ARL1 242605 sc-eQTL 4.30e-01 -0.0671 0.0849 0.409 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -411772 sc-eQTL 4.08e-01 0.0611 0.0737 0.409 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -227203 sc-eQTL 1.22e-01 0.0982 0.0633 0.409 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -469743 sc-eQTL 4.69e-01 -0.0577 0.0796 0.409 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -46570 sc-eQTL 6.41e-01 0.0363 0.0777 0.409 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -180582 sc-eQTL 1.15e-01 -0.0837 0.053 0.409 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 370272 sc-eQTL 6.07e-01 0.042 0.0817 0.409 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 242605 sc-eQTL 1.36e-01 -0.113 0.0754 0.409 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -411772 sc-eQTL 8.91e-01 -0.00839 0.0614 0.409 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -227203 sc-eQTL 9.02e-01 -0.0102 0.0825 0.409 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -469808 sc-eQTL 3.62e-01 -0.0885 0.0969 0.409 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -46570 eQTL 3.21e-04 -0.0889 0.0246 0.0 0.0 0.41

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -46570 1.41e-05 2.03e-05 1.29e-06 7.63e-06 2.41e-06 5.43e-06 1.53e-05 2.25e-06 1.39e-05 5.44e-06 1.6e-05 6.6e-06 2.16e-05 4.49e-06 3.8e-06 6.63e-06 6.8e-06 1.07e-05 3.14e-06 3.17e-06 6.18e-06 1.27e-05 1.1e-05 3.24e-06 2.32e-05 4.42e-06 6.4e-06 5.22e-06 1.33e-05 1.07e-05 9.27e-06 9.86e-07 1.21e-06 2.93e-06 5.44e-06 2.19e-06 1.65e-06 1.91e-06 2.15e-06 1.15e-06 8.54e-07 1.77e-05 1.84e-06 2.27e-07 7.75e-07 1.76e-06 1.27e-06 7.67e-07 4.03e-07