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Genes within 1Mb (chr12:101648189:C:CA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -833555 sc-eQTL 7.20e-01 0.0137 0.0381 0.65 B L1
ENSG00000075188 NUP37 -471931 sc-eQTL 3.45e-01 0.0626 0.0662 0.65 B L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.44e-03 0.127 0.0393 0.65 B L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 5.28e-01 0.0368 0.0583 0.65 B L1
ENSG00000120800 UTP20 368084 sc-eQTL 4.32e-01 -0.0521 0.0662 0.65 B L1
ENSG00000120805 ARL1 240417 sc-eQTL 5.50e-01 0.0341 0.0569 0.65 B L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.63e-01 0.00211 0.0456 0.65 B L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 4.18e-01 0.0419 0.0517 0.65 B L1
ENSG00000139351 SYCP3 -91283 sc-eQTL 4.21e-01 0.0661 0.0821 0.65 B L1
ENSG00000185480 PARPBP -471996 sc-eQTL 5.62e-01 -0.0457 0.0787 0.65 B L1
ENSG00000281344 HELLPAR -549396 sc-eQTL 6.31e-01 -0.0352 0.0734 0.65 B L1
ENSG00000075188 NUP37 -471931 sc-eQTL 6.17e-01 -0.0298 0.0596 0.65 CD4T L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.10e-01 0.128 0.08 0.65 CD4T L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 2.41e-01 0.0653 0.0556 0.65 CD4T L1
ENSG00000120800 UTP20 368084 sc-eQTL 8.96e-01 0.00804 0.0617 0.65 CD4T L1
ENSG00000120805 ARL1 240417 sc-eQTL 7.95e-01 -0.0157 0.0603 0.65 CD4T L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.60e-01 -0.0387 0.0422 0.65 CD4T L1
ENSG00000075188 NUP37 -471931 sc-eQTL 4.67e-01 0.0541 0.0742 0.65 CD8T L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 4.51e-02 0.161 0.0797 0.65 CD8T L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.61e-01 -0.0232 0.0528 0.65 CD8T L1
ENSG00000120800 UTP20 368084 sc-eQTL 7.28e-01 0.0232 0.0666 0.65 CD8T L1
ENSG00000120805 ARL1 240417 sc-eQTL 4.83e-01 -0.0516 0.0735 0.65 CD8T L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 5.30e-01 -0.0328 0.0522 0.65 CD8T L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 7.85e-01 0.0204 0.0749 0.65 CD8T L1
ENSG00000075188 NUP37 -471931 sc-eQTL 1.26e-01 -0.129 0.0839 0.649 DC L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 7.95e-01 -0.0201 0.0771 0.649 DC L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 2.73e-01 -0.0929 0.0846 0.649 DC L1
ENSG00000120800 UTP20 368084 sc-eQTL 6.16e-01 -0.0456 0.0909 0.649 DC L1
ENSG00000120805 ARL1 240417 sc-eQTL 6.47e-01 -0.0431 0.094 0.649 DC L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.57e-01 -0.0746 0.0808 0.649 DC L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 4.91e-01 -0.0461 0.0668 0.649 DC L1
ENSG00000185480 PARPBP -471996 sc-eQTL 2.42e-01 0.103 0.0878 0.649 DC L1
ENSG00000075188 NUP37 -471931 sc-eQTL 7.09e-01 0.0262 0.0703 0.65 Mono L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 7.65e-01 -0.0178 0.0595 0.65 Mono L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 5.40e-01 -0.0458 0.0746 0.65 Mono L1
ENSG00000120800 UTP20 368084 sc-eQTL 5.70e-01 0.0473 0.0832 0.65 Mono L1
ENSG00000120805 ARL1 240417 sc-eQTL 8.86e-01 -0.011 0.0766 0.65 Mono L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 1.50e-01 -0.0969 0.0671 0.65 Mono L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 1.41e-01 -0.0807 0.0547 0.65 Mono L1
ENSG00000075188 NUP37 -471931 sc-eQTL 5.16e-01 -0.0504 0.0775 0.648 NK L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.07e-01 0.0371 0.0719 0.648 NK L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.47e-02 -0.087 0.0518 0.648 NK L1
ENSG00000120800 UTP20 368084 sc-eQTL 1.17e-01 0.131 0.0835 0.648 NK L1
ENSG00000120805 ARL1 240417 sc-eQTL 7.35e-01 -0.0262 0.0772 0.648 NK L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.02e-01 0.0146 0.0582 0.648 NK L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 2.89e-01 0.0878 0.0826 0.648 NK L1
ENSG00000185480 PARPBP -471996 sc-eQTL 5.61e-01 0.0565 0.097 0.648 NK L1
ENSG00000017427 IGF1 -833555 sc-eQTL 3.23e-01 0.0287 0.0289 0.65 Other_T L1
ENSG00000075188 NUP37 -471931 sc-eQTL 7.15e-01 0.0202 0.0552 0.65 Other_T L1
ENSG00000111666 CHPT1 -48758 sc-eQTL 9.13e-02 0.136 0.0802 0.65 Other_T L1
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.43e-01 0.0116 0.0582 0.65 Other_T L1
ENSG00000120800 UTP20 368084 sc-eQTL 7.60e-01 0.0278 0.0909 0.65 Other_T L1
ENSG00000120805 ARL1 240417 sc-eQTL 7.81e-01 -0.0185 0.0663 0.65 Other_T L1
ENSG00000120860 WASHC3 -413960 sc-eQTL 1.51e-01 -0.0845 0.0586 0.65 Other_T L1
ENSG00000136048 DRAM1 -229391 sc-eQTL 5.68e-01 -0.0403 0.0706 0.65 Other_T L1
ENSG00000185480 PARPBP -471996 sc-eQTL 9.89e-01 0.000777 0.0589 0.65 Other_T L1
ENSG00000281344 HELLPAR -549396 sc-eQTL 4.70e-01 0.0495 0.0684 0.65 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -833555 sc-eQTL 7.28e-01 0.00654 0.0187 0.643 B_Activated L2
ENSG00000075188 NUP37 -471931 sc-eQTL 7.62e-01 -0.0295 0.0972 0.643 B_Activated L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.70e-01 0.0792 0.0716 0.643 B_Activated L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.14e-01 0.011 0.102 0.643 B_Activated L2
ENSG00000120800 UTP20 368084 sc-eQTL 5.77e-01 -0.0552 0.0987 0.643 B_Activated L2
ENSG00000120805 ARL1 240417 sc-eQTL 6.89e-01 0.0408 0.102 0.643 B_Activated L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.58e-01 0.00514 0.0972 0.643 B_Activated L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 6.36e-01 0.0463 0.0976 0.643 B_Activated L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 1.20e-01 0.125 0.0796 0.643 B_Activated L2
ENSG00000185480 PARPBP -471996 sc-eQTL 8.30e-02 -0.139 0.08 0.643 B_Activated L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 8.10e-01 -0.0182 0.0758 0.643 B_Activated L2
ENSG00000017427 IGF1 -833555 sc-eQTL 5.25e-01 0.0241 0.038 0.648 B_Intermediate L2
ENSG00000075188 NUP37 -471931 sc-eQTL 7.63e-02 0.167 0.0939 0.648 B_Intermediate L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.77e-02 0.111 0.0502 0.648 B_Intermediate L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 3.59e-01 0.0689 0.0749 0.648 B_Intermediate L2
ENSG00000120800 UTP20 368084 sc-eQTL 9.53e-01 -0.0049 0.0834 0.648 B_Intermediate L2
ENSG00000120805 ARL1 240417 sc-eQTL 5.14e-01 0.0614 0.0938 0.648 B_Intermediate L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 2.44e-01 0.0903 0.0773 0.648 B_Intermediate L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 2.45e-01 0.0967 0.083 0.648 B_Intermediate L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 5.43e-01 0.0533 0.0874 0.648 B_Intermediate L2
ENSG00000185480 PARPBP -471996 sc-eQTL 4.50e-01 -0.0694 0.0917 0.648 B_Intermediate L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 6.95e-01 0.0345 0.088 0.648 B_Intermediate L2
ENSG00000017427 IGF1 -833555 sc-eQTL 4.98e-01 0.0236 0.0348 0.651 B_Memory L2
ENSG00000075188 NUP37 -471931 sc-eQTL 6.28e-01 0.0446 0.0919 0.651 B_Memory L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.42e-01 0.0279 0.06 0.651 B_Memory L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.71e-01 -0.035 0.0822 0.651 B_Memory L2
ENSG00000120800 UTP20 368084 sc-eQTL 4.71e-01 -0.0652 0.0902 0.651 B_Memory L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.16e-01 0.0209 0.0897 0.651 B_Memory L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.52e-01 0.00487 0.0803 0.651 B_Memory L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 7.56e-01 0.0262 0.0842 0.651 B_Memory L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 7.75e-02 0.153 0.086 0.651 B_Memory L2
ENSG00000185480 PARPBP -471996 sc-eQTL 5.92e-01 0.0476 0.0886 0.651 B_Memory L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 1.66e-01 0.112 0.0803 0.651 B_Memory L2
ENSG00000017427 IGF1 -833555 sc-eQTL 6.59e-01 0.0212 0.048 0.65 B_Naive1 L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.65e-01 0.0501 0.0869 0.65 B_Naive1 L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.93e-04 0.158 0.0439 0.65 B_Naive1 L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.90e-01 -0.00888 0.0639 0.65 B_Naive1 L2
ENSG00000120800 UTP20 368084 sc-eQTL 7.59e-01 -0.0233 0.0759 0.65 B_Naive1 L2
ENSG00000120805 ARL1 240417 sc-eQTL 6.75e-01 -0.0356 0.0847 0.65 B_Naive1 L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 5.80e-01 -0.0355 0.0641 0.65 B_Naive1 L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 5.49e-01 0.0417 0.0695 0.65 B_Naive1 L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 1.75e-01 0.128 0.094 0.65 B_Naive1 L2
ENSG00000185480 PARPBP -471996 sc-eQTL 8.18e-01 0.0211 0.0919 0.65 B_Naive1 L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 2.67e-01 -0.0955 0.0858 0.65 B_Naive1 L2
ENSG00000017427 IGF1 -833555 sc-eQTL 1.23e-01 -0.0659 0.0425 0.65 B_Naive2 L2
ENSG00000075188 NUP37 -471931 sc-eQTL 7.37e-01 0.0295 0.0875 0.65 B_Naive2 L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.94e-04 0.172 0.0453 0.65 B_Naive2 L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.67e-01 0.0313 0.0726 0.65 B_Naive2 L2
ENSG00000120800 UTP20 368084 sc-eQTL 6.58e-01 -0.0373 0.0842 0.65 B_Naive2 L2
ENSG00000120805 ARL1 240417 sc-eQTL 7.01e-01 0.0356 0.0924 0.65 B_Naive2 L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.89e-01 -0.0113 0.0805 0.65 B_Naive2 L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 5.42e-01 -0.0486 0.0797 0.65 B_Naive2 L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 1.82e-01 -0.112 0.0836 0.65 B_Naive2 L2
ENSG00000185480 PARPBP -471996 sc-eQTL 4.90e-01 -0.0669 0.0967 0.65 B_Naive2 L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 5.13e-01 -0.0547 0.0834 0.65 B_Naive2 L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.25e-01 -0.0206 0.0928 0.648 CD4_CTL L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 9.70e-01 -0.0035 0.093 0.648 CD4_CTL L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 7.38e-01 0.0272 0.0813 0.648 CD4_CTL L2
ENSG00000120800 UTP20 368084 sc-eQTL 2.07e-01 -0.113 0.089 0.648 CD4_CTL L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.89e-01 0.0133 0.0947 0.648 CD4_CTL L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 7.25e-01 0.032 0.0908 0.648 CD4_CTL L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.19e-01 -0.0442 0.0684 0.65 CD4_Naive L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 5.21e-02 0.153 0.0783 0.65 CD4_Naive L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 1.12e-01 0.0965 0.0605 0.65 CD4_Naive L2
ENSG00000120800 UTP20 368084 sc-eQTL 4.42e-01 0.051 0.0662 0.65 CD4_Naive L2
ENSG00000120805 ARL1 240417 sc-eQTL 7.33e-01 -0.0246 0.0719 0.65 CD4_Naive L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.17e-01 -0.0503 0.0501 0.65 CD4_Naive L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.99e-01 -0.0383 0.0726 0.65 CD4_TCM L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 9.25e-02 0.141 0.0832 0.65 CD4_TCM L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.06e-01 0.00764 0.0649 0.65 CD4_TCM L2
ENSG00000120800 UTP20 368084 sc-eQTL 4.92e-01 -0.0557 0.0811 0.65 CD4_TCM L2
ENSG00000120805 ARL1 240417 sc-eQTL 2.98e-01 0.0791 0.0757 0.65 CD4_TCM L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.27e-01 0.00458 0.0498 0.65 CD4_TCM L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.77e-01 0.0479 0.0856 0.65 CD4_TEM L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 5.11e-01 -0.0542 0.0824 0.65 CD4_TEM L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 4.62e-01 -0.0584 0.0793 0.65 CD4_TEM L2
ENSG00000120800 UTP20 368084 sc-eQTL 1.93e-01 0.112 0.0856 0.65 CD4_TEM L2
ENSG00000120805 ARL1 240417 sc-eQTL 6.05e-01 -0.042 0.0811 0.65 CD4_TEM L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 6.86e-01 0.0294 0.0727 0.65 CD4_TEM L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.55e-01 -0.0147 0.0806 0.65 CD8_CTL L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 4.42e-01 0.0635 0.0825 0.65 CD8_CTL L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 1.90e-01 -0.0865 0.0658 0.65 CD8_CTL L2
ENSG00000120800 UTP20 368084 sc-eQTL 5.63e-01 0.0517 0.0893 0.65 CD8_CTL L2
ENSG00000120805 ARL1 240417 sc-eQTL 4.03e-01 -0.0739 0.0883 0.65 CD8_CTL L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.94e-01 0.01 0.0754 0.65 CD8_CTL L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 9.05e-01 -0.0112 0.0938 0.65 CD8_CTL L2
ENSG00000075188 NUP37 -471931 sc-eQTL 3.45e-01 0.0786 0.083 0.65 CD8_Naive L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 5.44e-02 0.158 0.0819 0.65 CD8_Naive L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.34e-01 0.0155 0.0742 0.65 CD8_Naive L2
ENSG00000120800 UTP20 368084 sc-eQTL 6.75e-01 -0.0331 0.0789 0.65 CD8_Naive L2
ENSG00000120805 ARL1 240417 sc-eQTL 4.01e-01 -0.072 0.0855 0.65 CD8_Naive L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.71e-01 -0.00919 0.0564 0.65 CD8_Naive L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 1.78e-01 -0.117 0.0867 0.65 CD8_Naive L2
ENSG00000075188 NUP37 -471931 sc-eQTL 9.31e-01 0.00791 0.091 0.653 CD8_TCM L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.49e-02 0.15 0.0809 0.653 CD8_TCM L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.15e-01 -0.00899 0.0845 0.653 CD8_TCM L2
ENSG00000120800 UTP20 368084 sc-eQTL 6.84e-01 -0.0375 0.0921 0.653 CD8_TCM L2
ENSG00000120805 ARL1 240417 sc-eQTL 7.00e-01 -0.0349 0.0905 0.653 CD8_TCM L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.91e-01 -0.0696 0.0809 0.653 CD8_TCM L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.73e-01 0.0787 0.0882 0.653 CD8_TCM L2
ENSG00000075188 NUP37 -471931 sc-eQTL 7.87e-01 0.0249 0.092 0.651 CD8_TEM L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.16e-01 0.0873 0.0868 0.651 CD8_TEM L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 1.97e-01 0.12 0.0928 0.651 CD8_TEM L2
ENSG00000120800 UTP20 368084 sc-eQTL 7.58e-01 -0.0308 0.1 0.651 CD8_TEM L2
ENSG00000120805 ARL1 240417 sc-eQTL 2.23e-01 0.116 0.0953 0.651 CD8_TEM L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.06e-02 -0.146 0.0829 0.651 CD8_TEM L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 2.87e-01 0.0982 0.0919 0.651 CD8_TEM L2
ENSG00000017427 IGF1 -833555 sc-eQTL 4.25e-01 0.0253 0.0317 0.649 MAIT L2
ENSG00000075188 NUP37 -471931 sc-eQTL 9.56e-01 -0.0049 0.0891 0.649 MAIT L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.38e-02 0.212 0.0856 0.649 MAIT L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.04e-01 -0.04 0.0769 0.649 MAIT L2
ENSG00000120800 UTP20 368084 sc-eQTL 7.08e-01 -0.0345 0.0922 0.649 MAIT L2
ENSG00000120805 ARL1 240417 sc-eQTL 9.34e-01 0.00783 0.0941 0.649 MAIT L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 4.07e-01 -0.0649 0.0781 0.649 MAIT L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 6.33e-01 -0.0425 0.0887 0.649 MAIT L2
ENSG00000185480 PARPBP -471996 sc-eQTL 7.75e-01 0.0249 0.087 0.649 MAIT L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 4.69e-01 0.0557 0.0769 0.649 MAIT L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.09e-01 -0.0239 0.0991 0.642 NK_CD56bright L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.87e-01 0.0763 0.0715 0.642 NK_CD56bright L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 2.57e-01 -0.0939 0.0826 0.642 NK_CD56bright L2
ENSG00000120800 UTP20 368084 sc-eQTL 3.85e-01 0.084 0.0966 0.642 NK_CD56bright L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.16e-01 -0.0221 0.0945 0.642 NK_CD56bright L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 2.43e-01 -0.0996 0.0852 0.642 NK_CD56bright L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 4.79e-02 0.177 0.0891 0.642 NK_CD56bright L2
ENSG00000185480 PARPBP -471996 sc-eQTL 4.29e-01 -0.075 0.0948 0.642 NK_CD56bright L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.50e-01 -0.0162 0.0859 0.647 NK_CD56dim L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.59e-01 0.0371 0.0839 0.647 NK_CD56dim L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 1.17e-01 -0.0993 0.0631 0.647 NK_CD56dim L2
ENSG00000120800 UTP20 368084 sc-eQTL 8.03e-01 0.022 0.0881 0.647 NK_CD56dim L2
ENSG00000120805 ARL1 240417 sc-eQTL 2.98e-02 -0.184 0.0843 0.647 NK_CD56dim L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 1.58e-01 0.103 0.0727 0.647 NK_CD56dim L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.57e-01 0.0817 0.0885 0.647 NK_CD56dim L2
ENSG00000185480 PARPBP -471996 sc-eQTL 1.05e-01 0.161 0.0992 0.647 NK_CD56dim L2
ENSG00000075188 NUP37 -471931 sc-eQTL 7.31e-01 -0.0306 0.0888 0.648 NK_HLA L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.91e-01 0.0961 0.0908 0.648 NK_HLA L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 1.86e-01 -0.0968 0.0729 0.648 NK_HLA L2
ENSG00000120800 UTP20 368084 sc-eQTL 7.20e-01 -0.0344 0.0957 0.648 NK_HLA L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.09e-01 0.0237 0.0978 0.648 NK_HLA L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 6.91e-01 -0.0362 0.0908 0.648 NK_HLA L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 7.71e-01 0.0272 0.0933 0.648 NK_HLA L2
ENSG00000185480 PARPBP -471996 sc-eQTL 4.04e-01 0.0767 0.0917 0.648 NK_HLA L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.34e-01 0.0184 0.088 0.647 NK_cytokine L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.28e-01 0.0805 0.0822 0.647 NK_cytokine L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 3.22e-01 -0.062 0.0624 0.647 NK_cytokine L2
ENSG00000120800 UTP20 368084 sc-eQTL 1.94e-01 0.113 0.0869 0.647 NK_cytokine L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.71e-02 0.15 0.0871 0.647 NK_cytokine L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 7.36e-01 0.0234 0.0691 0.647 NK_cytokine L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.13e-01 -0.0908 0.0898 0.647 NK_cytokine L2
ENSG00000185480 PARPBP -471996 sc-eQTL 5.68e-01 -0.0555 0.0971 0.647 NK_cytokine L2
ENSG00000017427 IGF1 -833555 sc-eQTL 1.80e-01 0.0947 0.0703 0.648 PB L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.14e-01 0.0225 0.0954 0.648 PB L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.85e-01 0.0644 0.0737 0.648 PB L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.33e-01 -0.0224 0.106 0.648 PB L2
ENSG00000120800 UTP20 368084 sc-eQTL 3.47e-01 0.115 0.122 0.648 PB L2
ENSG00000120805 ARL1 240417 sc-eQTL 3.66e-01 0.0679 0.0748 0.648 PB L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 1.30e-01 0.131 0.0857 0.648 PB L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 8.59e-01 0.0157 0.0879 0.648 PB L2
ENSG00000139351 SYCP3 -91283 sc-eQTL 4.95e-01 0.0698 0.102 0.648 PB L2
ENSG00000185480 PARPBP -471996 sc-eQTL 8.80e-01 -0.0141 0.0935 0.648 PB L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 8.37e-02 -0.149 0.0854 0.648 PB L2
ENSG00000017427 IGF1 -833555 sc-eQTL 2.80e-02 0.069 0.0312 0.65 Pro_T L2
ENSG00000075188 NUP37 -471931 sc-eQTL 9.53e-01 -0.00378 0.0636 0.65 Pro_T L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.28e-01 0.128 0.0838 0.65 Pro_T L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.53e-01 0.0037 0.0623 0.65 Pro_T L2
ENSG00000120800 UTP20 368084 sc-eQTL 4.16e-01 0.0724 0.0889 0.65 Pro_T L2
ENSG00000120805 ARL1 240417 sc-eQTL 1.70e-01 -0.0924 0.067 0.65 Pro_T L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.30e-01 -0.00642 0.0732 0.65 Pro_T L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.42e-01 -0.0597 0.0626 0.65 Pro_T L2
ENSG00000185480 PARPBP -471996 sc-eQTL 3.90e-01 0.0501 0.058 0.65 Pro_T L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 9.54e-01 0.00366 0.0636 0.65 Pro_T L2
ENSG00000075188 NUP37 -471931 sc-eQTL 2.10e-01 -0.112 0.0894 0.65 Treg L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 5.06e-01 0.0621 0.0933 0.65 Treg L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.69e-01 0.0349 0.0815 0.65 Treg L2
ENSG00000120800 UTP20 368084 sc-eQTL 3.20e-01 -0.0884 0.0887 0.65 Treg L2
ENSG00000120805 ARL1 240417 sc-eQTL 3.51e-01 -0.0857 0.0917 0.65 Treg L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.67e-01 0.00312 0.0746 0.65 Treg L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.84e-01 -0.0453 0.0827 0.644 cDC L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 4.58e-01 -0.0599 0.0806 0.644 cDC L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 2.86e-01 -0.111 0.104 0.644 cDC L2
ENSG00000120800 UTP20 368084 sc-eQTL 7.50e-01 -0.0301 0.0944 0.644 cDC L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.92e-01 0.0134 0.0978 0.644 cDC L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.63e-01 -0.0836 0.0917 0.644 cDC L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 8.59e-02 -0.123 0.071 0.644 cDC L2
ENSG00000185480 PARPBP -471996 sc-eQTL 1.45e-01 0.119 0.0812 0.644 cDC L2
ENSG00000075188 NUP37 -471931 sc-eQTL 1.37e-01 0.12 0.0803 0.65 cMono_IL1B L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 9.81e-01 -0.00146 0.0609 0.65 cMono_IL1B L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 5.07e-01 0.0536 0.0807 0.65 cMono_IL1B L2
ENSG00000120800 UTP20 368084 sc-eQTL 5.55e-01 -0.0537 0.0907 0.65 cMono_IL1B L2
ENSG00000120805 ARL1 240417 sc-eQTL 8.82e-01 -0.0121 0.0814 0.65 cMono_IL1B L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 5.76e-01 -0.0392 0.0701 0.65 cMono_IL1B L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 1.64e-02 -0.143 0.059 0.65 cMono_IL1B L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.16e-01 -0.0203 0.0871 0.65 cMono_S100A L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 4.41e-01 -0.0515 0.0667 0.65 cMono_S100A L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.48e-02 -0.135 0.0807 0.65 cMono_S100A L2
ENSG00000120800 UTP20 368084 sc-eQTL 9.88e-01 -0.00139 0.0951 0.65 cMono_S100A L2
ENSG00000120805 ARL1 240417 sc-eQTL 9.52e-01 0.0054 0.0894 0.65 cMono_S100A L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 2.25e-01 -0.1 0.0824 0.65 cMono_S100A L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 6.37e-01 -0.0304 0.0644 0.65 cMono_S100A L2
ENSG00000075188 NUP37 -471931 sc-eQTL 8.29e-01 0.0248 0.114 0.648 gdT L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.13e-01 -0.17 0.106 0.648 gdT L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 7.25e-01 -0.0284 0.0808 0.648 gdT L2
ENSG00000120800 UTP20 368084 sc-eQTL 8.77e-01 0.0165 0.107 0.648 gdT L2
ENSG00000120805 ARL1 240417 sc-eQTL 4.50e-01 0.0847 0.112 0.648 gdT L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 3.28e-01 0.102 0.104 0.648 gdT L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 1.95e-01 -0.137 0.105 0.648 gdT L2
ENSG00000185480 PARPBP -471996 sc-eQTL 4.11e-01 0.0856 0.104 0.648 gdT L2
ENSG00000281344 HELLPAR -549396 sc-eQTL 6.25e-01 0.0466 0.0953 0.648 gdT L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.09e-01 -0.0592 0.0893 0.651 intMono L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.53e-01 -0.0761 0.0816 0.651 intMono L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 9.04e-01 0.0116 0.0961 0.651 intMono L2
ENSG00000120800 UTP20 368084 sc-eQTL 1.51e-01 0.129 0.0895 0.651 intMono L2
ENSG00000120805 ARL1 240417 sc-eQTL 7.71e-01 -0.0271 0.0931 0.651 intMono L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 7.22e-01 -0.032 0.0899 0.651 intMono L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 4.03e-01 -0.0657 0.0785 0.651 intMono L2
ENSG00000075188 NUP37 -471931 sc-eQTL 5.57e-01 -0.0515 0.0876 0.652 ncMono L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.31e-01 0.0389 0.0809 0.652 ncMono L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.03e-01 -0.0504 0.0969 0.652 ncMono L2
ENSG00000120800 UTP20 368084 sc-eQTL 1.62e-01 0.118 0.0844 0.652 ncMono L2
ENSG00000120805 ARL1 240417 sc-eQTL 1.19e-01 0.127 0.081 0.652 ncMono L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 8.93e-01 0.0105 0.0784 0.652 ncMono L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 9.81e-01 -0.0017 0.073 0.652 ncMono L2
ENSG00000075188 NUP37 -471931 sc-eQTL 1.92e-01 -0.139 0.106 0.636 pDC L2
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.49e-01 0.107 0.0926 0.636 pDC L2
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.31e-01 -0.0211 0.0984 0.636 pDC L2
ENSG00000120800 UTP20 368084 sc-eQTL 2.59e-01 -0.111 0.0976 0.636 pDC L2
ENSG00000120805 ARL1 240417 sc-eQTL 2.88e-01 -0.11 0.103 0.636 pDC L2
ENSG00000120860 WASHC3 -413960 sc-eQTL 6.33e-01 -0.0431 0.0899 0.636 pDC L2
ENSG00000136048 DRAM1 -229391 sc-eQTL 9.96e-01 -0.00039 0.0696 0.636 pDC L2
ENSG00000185480 PARPBP -471996 sc-eQTL 7.95e-01 0.024 0.0923 0.636 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -833555 sc-eQTL 2.28e-01 0.0528 0.0437 0.65 B_Memory LOneK1K
ENSG00000075188 NUP37 -471931 sc-eQTL 1.72e-01 0.12 0.0877 0.65 B_Memory LOneK1K
ENSG00000111666 CHPT1 -48758 sc-eQTL 1.44e-01 0.0675 0.0461 0.65 B_Memory LOneK1K
ENSG00000111670 GNPTAB -182770 sc-eQTL 8.32e-01 0.0155 0.0728 0.65 B_Memory LOneK1K
ENSG00000120800 UTP20 368084 sc-eQTL 4.74e-01 -0.0537 0.0749 0.65 B_Memory LOneK1K
ENSG00000120805 ARL1 240417 sc-eQTL 5.55e-01 0.0501 0.0847 0.65 B_Memory LOneK1K
ENSG00000120860 WASHC3 -413960 sc-eQTL 4.50e-01 0.0479 0.0632 0.65 B_Memory LOneK1K
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.38e-01 0.0727 0.0757 0.65 B_Memory LOneK1K
ENSG00000139351 SYCP3 -91283 sc-eQTL 3.93e-01 0.0747 0.0872 0.65 B_Memory LOneK1K
ENSG00000185480 PARPBP -471996 sc-eQTL 6.80e-01 -0.0378 0.0915 0.65 B_Memory LOneK1K
ENSG00000281344 HELLPAR -549396 sc-eQTL 1.31e-01 0.137 0.0902 0.65 B_Memory LOneK1K
ENSG00000017427 IGF1 -833555 sc-eQTL 8.96e-01 -0.00676 0.0514 0.65 B_Naive LOneK1K
ENSG00000075188 NUP37 -471931 sc-eQTL 7.42e-01 0.0277 0.0841 0.65 B_Naive LOneK1K
ENSG00000111666 CHPT1 -48758 sc-eQTL 2.45e-04 0.15 0.0402 0.65 B_Naive LOneK1K
ENSG00000111670 GNPTAB -182770 sc-eQTL 2.49e-01 0.0686 0.0593 0.65 B_Naive LOneK1K
ENSG00000120800 UTP20 368084 sc-eQTL 3.51e-01 -0.068 0.0726 0.65 B_Naive LOneK1K
ENSG00000120805 ARL1 240417 sc-eQTL 4.85e-01 -0.058 0.0829 0.65 B_Naive LOneK1K
ENSG00000120860 WASHC3 -413960 sc-eQTL 6.48e-01 -0.0284 0.0622 0.65 B_Naive LOneK1K
ENSG00000136048 DRAM1 -229391 sc-eQTL 8.75e-01 -0.0103 0.0652 0.65 B_Naive LOneK1K
ENSG00000139351 SYCP3 -91283 sc-eQTL 5.36e-01 0.0582 0.094 0.65 B_Naive LOneK1K
ENSG00000185480 PARPBP -471996 sc-eQTL 9.85e-01 -0.00175 0.0958 0.65 B_Naive LOneK1K
ENSG00000281344 HELLPAR -549396 sc-eQTL 5.01e-01 -0.0587 0.0871 0.65 B_Naive LOneK1K
ENSG00000075188 NUP37 -471931 sc-eQTL 1.45e-01 0.107 0.0732 0.65 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -48758 sc-eQTL 5.80e-01 -0.0329 0.0594 0.65 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -182770 sc-eQTL 4.55e-01 -0.0573 0.0764 0.65 CD14_Mono LOneK1K
ENSG00000120800 UTP20 368084 sc-eQTL 8.73e-01 0.0144 0.0905 0.65 CD14_Mono LOneK1K
ENSG00000120805 ARL1 240417 sc-eQTL 9.29e-01 -0.00688 0.0774 0.65 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -413960 sc-eQTL 7.33e-02 -0.12 0.0668 0.65 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -229391 sc-eQTL 6.00e-02 -0.104 0.0548 0.65 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -471931 sc-eQTL 2.88e-01 -0.09 0.0845 0.649 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -48758 sc-eQTL 6.95e-01 -0.029 0.074 0.649 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -182770 sc-eQTL 6.47e-01 0.0411 0.0896 0.649 CD16_Mono LOneK1K
ENSG00000120800 UTP20 368084 sc-eQTL 6.81e-02 0.157 0.0855 0.649 CD16_Mono LOneK1K
ENSG00000120805 ARL1 240417 sc-eQTL 5.63e-01 0.0496 0.0856 0.649 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -413960 sc-eQTL 9.70e-01 0.00282 0.0743 0.649 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -229391 sc-eQTL 7.10e-01 -0.0238 0.0641 0.649 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -471931 sc-eQTL 7.67e-01 -0.0244 0.0821 0.647 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -48758 sc-eQTL 3.71e-01 0.0716 0.0799 0.647 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -182770 sc-eQTL 7.02e-02 -0.099 0.0544 0.647 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 368084 sc-eQTL 7.74e-02 0.148 0.0835 0.647 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 240417 sc-eQTL 6.47e-01 -0.0358 0.078 0.647 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -413960 sc-eQTL 4.35e-01 0.0494 0.0631 0.647 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -229391 sc-eQTL 3.72e-01 0.0759 0.0848 0.647 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -471996 sc-eQTL 2.34e-01 0.119 0.0996 0.647 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -48758 eQTL 7.86e-13 -0.179 0.0246 0.841 0.598 0.368
ENSG00000120860 WASHC3 -413960 pQTL 0.045 -0.0185 0.00924 0.0 0.0 0.37

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -48758 2.69e-05 2.24e-05 6.78e-06 1.01e-05 3.64e-06 8.52e-06 5.32e-05 2.14e-06 1.35e-05 6.76e-06 2.26e-05 8e-06 2.99e-05 5.36e-06 4.93e-06 9.57e-06 1.02e-05 1.57e-05 5.45e-06 3.29e-06 7.77e-06 1.62e-05 3.62e-05 4.25e-06 2.57e-05 5.31e-06 7.62e-06 4.83e-06 3.39e-05 1.49e-05 1.07e-05 8.06e-07 1.31e-06 3.54e-06 7.35e-06 4.5e-06 3.03e-06 2.15e-06 2.01e-06 2.37e-06 9.26e-07 5.02e-05 2.81e-06 2.69e-07 1.17e-06 2.79e-06 2.6e-06 6.86e-07 7.82e-07
ENSG00000120800 \N 368084 1.3e-06 2.71e-06 1.3e-06 1.51e-06 1.31e-06 8.43e-07 2.26e-06 3.49e-07 1.72e-06 7.1e-07 1.86e-06 1.2e-06 2.84e-06 1.44e-06 3.88e-07 1.02e-06 1.12e-06 1.21e-06 6.47e-07 6.96e-07 6.18e-07 1.95e-06 2.51e-06 6.4e-07 2.39e-06 7.94e-07 1.04e-06 1.01e-06 1.68e-06 1.9e-06 7.58e-07 4.29e-08 5.37e-08 6.91e-07 1.01e-06 9.87e-07 7.47e-07 2.24e-07 3.95e-07 2.17e-07 3.64e-08 3.35e-06 3.59e-07 1.38e-07 1.92e-07 2.29e-07 1.58e-07 8.96e-08 1.11e-07