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Genes within 1Mb (chr12:101640342:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -841402 sc-eQTL 3.75e-01 0.0355 0.0399 0.325 B L1
ENSG00000075188 NUP37 -479778 sc-eQTL 2.21e-01 -0.0851 0.0693 0.325 B L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.95e-04 0.155 0.0409 0.325 B L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.52e-01 -0.0276 0.0612 0.325 B L1
ENSG00000120800 UTP20 360237 sc-eQTL 9.96e-01 0.000306 0.0696 0.325 B L1
ENSG00000120805 ARL1 232570 sc-eQTL 9.83e-01 0.00126 0.0598 0.325 B L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.18e-01 -0.0173 0.0479 0.325 B L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.27e-01 0.0532 0.0542 0.325 B L1
ENSG00000139351 SYCP3 -99130 sc-eQTL 3.83e-01 0.0752 0.0861 0.325 B L1
ENSG00000185480 PARPBP -479843 sc-eQTL 5.38e-01 -0.051 0.0825 0.325 B L1
ENSG00000281344 HELLPAR -557243 sc-eQTL 5.08e-01 0.051 0.077 0.325 B L1
ENSG00000075188 NUP37 -479778 sc-eQTL 8.09e-01 0.0153 0.063 0.325 CD4T L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 9.32e-02 0.143 0.0845 0.325 CD4T L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 8.54e-01 0.0109 0.059 0.325 CD4T L1
ENSG00000120800 UTP20 360237 sc-eQTL 7.31e-01 -0.0225 0.0652 0.325 CD4T L1
ENSG00000120805 ARL1 232570 sc-eQTL 3.12e-01 -0.0644 0.0636 0.325 CD4T L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.48e-01 0.00294 0.0447 0.325 CD4T L1
ENSG00000075188 NUP37 -479778 sc-eQTL 7.89e-01 -0.021 0.0782 0.325 CD8T L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 8.08e-02 0.148 0.0841 0.325 CD8T L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 5.86e-02 -0.105 0.0552 0.325 CD8T L1
ENSG00000120800 UTP20 360237 sc-eQTL 6.59e-01 -0.0311 0.0702 0.325 CD8T L1
ENSG00000120805 ARL1 232570 sc-eQTL 6.77e-01 0.0323 0.0774 0.325 CD8T L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 4.88e-01 -0.0382 0.055 0.325 CD8T L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 5.47e-02 -0.151 0.0782 0.325 CD8T L1
ENSG00000075188 NUP37 -479778 sc-eQTL 9.10e-02 -0.149 0.088 0.322 DC L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.60e-01 0.114 0.0806 0.322 DC L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.22e-05 -0.35 0.0856 0.322 DC L1
ENSG00000120800 UTP20 360237 sc-eQTL 5.77e-02 -0.181 0.0947 0.322 DC L1
ENSG00000120805 ARL1 232570 sc-eQTL 5.49e-02 -0.189 0.0979 0.322 DC L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.00e-01 0.0328 0.0851 0.322 DC L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.19e-01 -0.0701 0.0701 0.322 DC L1
ENSG00000185480 PARPBP -479843 sc-eQTL 5.92e-01 0.0496 0.0925 0.322 DC L1
ENSG00000075188 NUP37 -479778 sc-eQTL 7.24e-01 -0.0264 0.0746 0.325 Mono L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 5.77e-01 -0.0352 0.0631 0.325 Mono L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 8.37e-01 -0.0163 0.0791 0.325 Mono L1
ENSG00000120800 UTP20 360237 sc-eQTL 6.68e-02 -0.161 0.0876 0.325 Mono L1
ENSG00000120805 ARL1 232570 sc-eQTL 8.97e-01 -0.0105 0.0812 0.325 Mono L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.84e-01 -0.0014 0.0715 0.325 Mono L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.66e-01 -0.0527 0.0582 0.325 Mono L1
ENSG00000075188 NUP37 -479778 sc-eQTL 2.48e-01 -0.0925 0.0798 0.324 NK L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 9.67e-02 0.123 0.0738 0.324 NK L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 5.29e-01 -0.0339 0.0538 0.324 NK L1
ENSG00000120800 UTP20 360237 sc-eQTL 7.44e-01 0.0283 0.0866 0.324 NK L1
ENSG00000120805 ARL1 232570 sc-eQTL 4.22e-01 -0.064 0.0795 0.324 NK L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 5.24e-01 0.0383 0.06 0.324 NK L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 2.20e-01 -0.105 0.0851 0.324 NK L1
ENSG00000185480 PARPBP -479843 sc-eQTL 4.03e-01 -0.0839 0.1 0.324 NK L1
ENSG00000017427 IGF1 -841402 sc-eQTL 2.55e-01 0.0345 0.0302 0.325 Other_T L1
ENSG00000075188 NUP37 -479778 sc-eQTL 5.41e-01 -0.0353 0.0577 0.325 Other_T L1
ENSG00000111666 CHPT1 -56605 sc-eQTL 5.80e-02 0.159 0.0836 0.325 Other_T L1
ENSG00000111670 GNPTAB -190617 sc-eQTL 8.72e-01 -0.00983 0.0609 0.325 Other_T L1
ENSG00000120800 UTP20 360237 sc-eQTL 6.99e-01 0.0368 0.095 0.325 Other_T L1
ENSG00000120805 ARL1 232570 sc-eQTL 1.22e-01 0.107 0.0689 0.325 Other_T L1
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.32e-01 0.0131 0.0616 0.325 Other_T L1
ENSG00000136048 DRAM1 -237238 sc-eQTL 9.29e-01 0.00659 0.0739 0.325 Other_T L1
ENSG00000185480 PARPBP -479843 sc-eQTL 6.27e-01 -0.03 0.0615 0.325 Other_T L1
ENSG00000281344 HELLPAR -557243 sc-eQTL 4.91e-01 0.0494 0.0715 0.325 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -841402 sc-eQTL 7.28e-02 0.0355 0.0197 0.314 B_Activated L2
ENSG00000075188 NUP37 -479778 sc-eQTL 6.93e-01 0.0408 0.103 0.314 B_Activated L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.26e-02 0.154 0.0753 0.314 B_Activated L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.10e-01 0.0552 0.108 0.314 B_Activated L2
ENSG00000120800 UTP20 360237 sc-eQTL 4.36e-01 0.0815 0.104 0.314 B_Activated L2
ENSG00000120805 ARL1 232570 sc-eQTL 7.95e-01 0.0281 0.108 0.314 B_Activated L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 2.65e-01 -0.115 0.103 0.314 B_Activated L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 1.60e-01 0.145 0.103 0.314 B_Activated L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 1.02e-01 0.138 0.0843 0.314 B_Activated L2
ENSG00000185480 PARPBP -479843 sc-eQTL 8.29e-01 0.0185 0.0855 0.314 B_Activated L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 8.04e-01 -0.02 0.0803 0.314 B_Activated L2
ENSG00000017427 IGF1 -841402 sc-eQTL 2.91e-01 0.0414 0.039 0.324 B_Intermediate L2
ENSG00000075188 NUP37 -479778 sc-eQTL 3.53e-01 -0.0906 0.0973 0.324 B_Intermediate L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.97e-04 0.192 0.0506 0.324 B_Intermediate L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 4.66e-01 -0.0564 0.0772 0.324 B_Intermediate L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.30e-01 0.13 0.0855 0.324 B_Intermediate L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.25e-01 0.117 0.0964 0.324 B_Intermediate L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.73e-01 -0.0128 0.0799 0.324 B_Intermediate L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 6.41e-01 0.04 0.0857 0.324 B_Intermediate L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 5.26e-02 0.174 0.0893 0.324 B_Intermediate L2
ENSG00000185480 PARPBP -479843 sc-eQTL 3.38e-01 -0.0906 0.0944 0.324 B_Intermediate L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 6.41e-01 0.0424 0.0907 0.324 B_Intermediate L2
ENSG00000017427 IGF1 -841402 sc-eQTL 1.25e-01 0.0563 0.0365 0.325 B_Memory L2
ENSG00000075188 NUP37 -479778 sc-eQTL 5.66e-01 0.0558 0.097 0.325 B_Memory L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 3.79e-02 0.131 0.0627 0.325 B_Memory L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.12e-01 -0.0877 0.0865 0.325 B_Memory L2
ENSG00000120800 UTP20 360237 sc-eQTL 2.50e-01 -0.11 0.0949 0.325 B_Memory L2
ENSG00000120805 ARL1 232570 sc-eQTL 8.70e-01 -0.0155 0.0947 0.325 B_Memory L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.83e-01 -0.0233 0.0847 0.325 B_Memory L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 7.68e-01 0.0263 0.0888 0.325 B_Memory L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 1.47e-02 0.222 0.0901 0.325 B_Memory L2
ENSG00000185480 PARPBP -479843 sc-eQTL 6.71e-01 0.0398 0.0935 0.325 B_Memory L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 4.21e-01 0.0685 0.085 0.325 B_Memory L2
ENSG00000017427 IGF1 -841402 sc-eQTL 8.09e-01 0.0122 0.0505 0.325 B_Naive1 L2
ENSG00000075188 NUP37 -479778 sc-eQTL 6.45e-01 -0.0421 0.0913 0.325 B_Naive1 L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.35e-03 0.151 0.0463 0.325 B_Naive1 L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.44e-01 0.00476 0.0672 0.325 B_Naive1 L2
ENSG00000120800 UTP20 360237 sc-eQTL 6.77e-01 0.0332 0.0797 0.325 B_Naive1 L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.66e-01 -0.0804 0.0888 0.325 B_Naive1 L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 1.89e-01 -0.0884 0.0671 0.325 B_Naive1 L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 2.00e-01 0.0934 0.0727 0.325 B_Naive1 L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 6.91e-01 0.0395 0.0991 0.325 B_Naive1 L2
ENSG00000185480 PARPBP -479843 sc-eQTL 7.32e-01 -0.0331 0.0965 0.325 B_Naive1 L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 2.50e-01 -0.104 0.0901 0.325 B_Naive1 L2
ENSG00000017427 IGF1 -841402 sc-eQTL 6.42e-01 0.0203 0.0437 0.324 B_Naive2 L2
ENSG00000075188 NUP37 -479778 sc-eQTL 7.96e-01 0.0232 0.0895 0.324 B_Naive2 L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.63e-02 0.114 0.0473 0.324 B_Naive2 L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.35e-01 -0.00603 0.0743 0.324 B_Naive2 L2
ENSG00000120800 UTP20 360237 sc-eQTL 4.71e-01 -0.0622 0.086 0.324 B_Naive2 L2
ENSG00000120805 ARL1 232570 sc-eQTL 9.55e-01 -0.00532 0.0945 0.324 B_Naive2 L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.27e-01 0.0181 0.0823 0.324 B_Naive2 L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 5.69e-01 -0.0465 0.0815 0.324 B_Naive2 L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 6.18e-01 -0.0429 0.0858 0.324 B_Naive2 L2
ENSG00000185480 PARPBP -479843 sc-eQTL 5.52e-01 -0.059 0.0989 0.324 B_Naive2 L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 6.66e-01 0.0369 0.0853 0.324 B_Naive2 L2
ENSG00000075188 NUP37 -479778 sc-eQTL 5.31e-01 0.0604 0.0962 0.325 CD4_CTL L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.24e-01 0.148 0.0959 0.325 CD4_CTL L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.19e-01 -0.0842 0.0842 0.325 CD4_CTL L2
ENSG00000120800 UTP20 360237 sc-eQTL 2.42e-01 -0.109 0.0925 0.325 CD4_CTL L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.06e-02 0.226 0.097 0.325 CD4_CTL L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.14e-01 0.0102 0.0943 0.325 CD4_CTL L2
ENSG00000075188 NUP37 -479778 sc-eQTL 9.39e-01 0.00558 0.0727 0.325 CD4_Naive L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.66e-01 0.116 0.0834 0.325 CD4_Naive L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.41e-01 -0.0048 0.0646 0.325 CD4_Naive L2
ENSG00000120800 UTP20 360237 sc-eQTL 6.54e-01 -0.0316 0.0704 0.325 CD4_Naive L2
ENSG00000120805 ARL1 232570 sc-eQTL 5.86e-01 -0.0416 0.0762 0.325 CD4_Naive L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.47e-01 -0.0172 0.0533 0.325 CD4_Naive L2
ENSG00000075188 NUP37 -479778 sc-eQTL 8.19e-01 -0.0174 0.0761 0.325 CD4_TCM L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 8.31e-02 0.152 0.0871 0.325 CD4_TCM L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 1.05e-01 0.11 0.0675 0.325 CD4_TCM L2
ENSG00000120800 UTP20 360237 sc-eQTL 4.56e-01 0.0634 0.0849 0.325 CD4_TCM L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.67e-01 -0.0717 0.0794 0.325 CD4_TCM L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.72e-01 0.00843 0.0522 0.325 CD4_TCM L2
ENSG00000075188 NUP37 -479778 sc-eQTL 6.42e-01 -0.0423 0.0908 0.325 CD4_TEM L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.30e-01 0.132 0.087 0.325 CD4_TEM L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.37e-01 -0.00669 0.0842 0.325 CD4_TEM L2
ENSG00000120800 UTP20 360237 sc-eQTL 6.33e-01 0.0436 0.0911 0.325 CD4_TEM L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.44e-01 -0.0816 0.0859 0.325 CD4_TEM L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.34e-01 0.0262 0.0771 0.325 CD4_TEM L2
ENSG00000075188 NUP37 -479778 sc-eQTL 8.24e-01 -0.0185 0.0831 0.325 CD8_CTL L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 2.08e-01 0.107 0.085 0.325 CD8_CTL L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 2.15e-01 -0.0845 0.068 0.325 CD8_CTL L2
ENSG00000120800 UTP20 360237 sc-eQTL 9.61e-01 -0.00452 0.0923 0.325 CD8_CTL L2
ENSG00000120805 ARL1 232570 sc-eQTL 8.28e-01 0.0198 0.0912 0.325 CD8_CTL L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 3.75e-01 0.0691 0.0777 0.325 CD8_CTL L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 1.50e-01 -0.139 0.0963 0.325 CD8_CTL L2
ENSG00000075188 NUP37 -479778 sc-eQTL 9.39e-01 -0.00666 0.0873 0.325 CD8_Naive L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 2.28e-01 0.105 0.0865 0.325 CD8_Naive L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 2.95e-01 -0.0816 0.0777 0.325 CD8_Naive L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.16e-01 -0.13 0.0824 0.325 CD8_Naive L2
ENSG00000120805 ARL1 232570 sc-eQTL 4.40e-01 0.0694 0.0898 0.325 CD8_Naive L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 4.25e-01 -0.0473 0.0592 0.325 CD8_Naive L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 6.25e-02 -0.17 0.0907 0.325 CD8_Naive L2
ENSG00000075188 NUP37 -479778 sc-eQTL 5.45e-01 0.0582 0.0961 0.329 CD8_TCM L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.03e-01 0.14 0.0857 0.329 CD8_TCM L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 8.57e-02 -0.153 0.0886 0.329 CD8_TCM L2
ENSG00000120800 UTP20 360237 sc-eQTL 5.99e-01 -0.0513 0.0973 0.329 CD8_TCM L2
ENSG00000120805 ARL1 232570 sc-eQTL 9.13e-01 -0.0104 0.0957 0.329 CD8_TCM L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 2.99e-01 -0.089 0.0854 0.329 CD8_TCM L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 2.31e-01 -0.112 0.093 0.329 CD8_TCM L2
ENSG00000075188 NUP37 -479778 sc-eQTL 9.61e-01 0.00455 0.0927 0.331 CD8_TEM L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 6.38e-01 0.0413 0.0876 0.331 CD8_TEM L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.29e-01 0.0918 0.0937 0.331 CD8_TEM L2
ENSG00000120800 UTP20 360237 sc-eQTL 3.56e-01 0.093 0.101 0.331 CD8_TEM L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.15e-01 0.119 0.096 0.331 CD8_TEM L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 3.66e-02 -0.175 0.0833 0.331 CD8_TEM L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 5.88e-01 -0.0504 0.0928 0.331 CD8_TEM L2
ENSG00000017427 IGF1 -841402 sc-eQTL 6.42e-01 -0.0154 0.0331 0.323 MAIT L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.77e-01 -0.101 0.0927 0.323 MAIT L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.21e-01 0.14 0.09 0.323 MAIT L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.75e-01 -0.0713 0.0801 0.323 MAIT L2
ENSG00000120800 UTP20 360237 sc-eQTL 7.61e-01 0.0292 0.0962 0.323 MAIT L2
ENSG00000120805 ARL1 232570 sc-eQTL 5.75e-01 0.055 0.0981 0.323 MAIT L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.42e-01 -0.0269 0.0816 0.323 MAIT L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 7.06e-01 0.0349 0.0926 0.323 MAIT L2
ENSG00000185480 PARPBP -479843 sc-eQTL 1.61e-01 0.127 0.0903 0.323 MAIT L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 9.42e-01 0.00584 0.0803 0.323 MAIT L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.08e-01 -0.126 0.1 0.327 NK_CD56bright L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 7.29e-01 0.0252 0.0727 0.327 NK_CD56bright L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.11e-01 -0.0428 0.084 0.327 NK_CD56bright L2
ENSG00000120800 UTP20 360237 sc-eQTL 9.53e-01 0.0058 0.0981 0.327 NK_CD56bright L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.42e-01 -0.112 0.0955 0.327 NK_CD56bright L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.05e-01 -0.0104 0.0866 0.327 NK_CD56bright L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 6.72e-01 0.0386 0.0911 0.327 NK_CD56bright L2
ENSG00000185480 PARPBP -479843 sc-eQTL 9.90e-01 0.00123 0.0962 0.327 NK_CD56bright L2
ENSG00000075188 NUP37 -479778 sc-eQTL 1.95e-01 -0.114 0.088 0.323 NK_CD56dim L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.79e-01 0.116 0.086 0.323 NK_CD56dim L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 4.47e-01 -0.0497 0.0652 0.323 NK_CD56dim L2
ENSG00000120800 UTP20 360237 sc-eQTL 7.82e-01 0.0251 0.0906 0.323 NK_CD56dim L2
ENSG00000120805 ARL1 232570 sc-eQTL 1.10e-02 -0.221 0.0863 0.323 NK_CD56dim L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 5.41e-01 0.046 0.0751 0.323 NK_CD56dim L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.66e-01 -0.0825 0.091 0.323 NK_CD56dim L2
ENSG00000185480 PARPBP -479843 sc-eQTL 8.80e-01 -0.0155 0.103 0.323 NK_CD56dim L2
ENSG00000075188 NUP37 -479778 sc-eQTL 8.41e-01 -0.0181 0.0901 0.331 NK_HLA L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.45e-01 0.0706 0.0923 0.331 NK_HLA L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.66e-01 -0.0671 0.0741 0.331 NK_HLA L2
ENSG00000120800 UTP20 360237 sc-eQTL 5.98e-01 -0.0513 0.0971 0.331 NK_HLA L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.97e-01 0.104 0.099 0.331 NK_HLA L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.19e-01 -0.0333 0.0922 0.331 NK_HLA L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 4.42e-01 -0.0728 0.0946 0.331 NK_HLA L2
ENSG00000185480 PARPBP -479843 sc-eQTL 4.84e-01 0.0653 0.0931 0.331 NK_HLA L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.60e-01 0.0995 0.0881 0.323 NK_cytokine L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 3.39e-02 0.175 0.0818 0.323 NK_cytokine L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 4.68e-01 -0.0455 0.0627 0.323 NK_cytokine L2
ENSG00000120800 UTP20 360237 sc-eQTL 5.55e-01 0.0517 0.0875 0.323 NK_cytokine L2
ENSG00000120805 ARL1 232570 sc-eQTL 2.05e-01 0.111 0.0877 0.323 NK_cytokine L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 2.32e-01 0.0829 0.0691 0.323 NK_cytokine L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 8.29e-01 -0.0196 0.0903 0.323 NK_cytokine L2
ENSG00000185480 PARPBP -479843 sc-eQTL 5.63e-01 -0.0565 0.0975 0.323 NK_cytokine L2
ENSG00000017427 IGF1 -841402 sc-eQTL 5.83e-01 0.04 0.0727 0.326 PB L2
ENSG00000075188 NUP37 -479778 sc-eQTL 1.30e-01 -0.148 0.097 0.326 PB L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 8.45e-01 0.0149 0.076 0.326 PB L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.29e-01 0.0528 0.109 0.326 PB L2
ENSG00000120800 UTP20 360237 sc-eQTL 4.37e-01 -0.0978 0.125 0.326 PB L2
ENSG00000120805 ARL1 232570 sc-eQTL 5.07e-01 0.0513 0.077 0.326 PB L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.99e-04 0.289 0.0847 0.326 PB L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 8.05e-01 -0.0224 0.0903 0.326 PB L2
ENSG00000139351 SYCP3 -99130 sc-eQTL 8.18e-02 0.182 0.104 0.326 PB L2
ENSG00000185480 PARPBP -479843 sc-eQTL 3.18e-01 -0.0959 0.0957 0.326 PB L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 4.27e-01 -0.0707 0.0887 0.326 PB L2
ENSG00000017427 IGF1 -841402 sc-eQTL 1.95e-01 0.0434 0.0334 0.328 Pro_T L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.20e-01 -0.0829 0.0673 0.328 Pro_T L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.17e-02 0.182 0.0887 0.328 Pro_T L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.49e-01 0.0621 0.0661 0.328 Pro_T L2
ENSG00000120800 UTP20 360237 sc-eQTL 3.98e-01 0.0801 0.0945 0.328 Pro_T L2
ENSG00000120805 ARL1 232570 sc-eQTL 4.22e-01 0.0575 0.0715 0.328 Pro_T L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.46e-01 0.0053 0.0778 0.328 Pro_T L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.54e-01 -0.0618 0.0666 0.328 Pro_T L2
ENSG00000185480 PARPBP -479843 sc-eQTL 3.22e-01 -0.0612 0.0617 0.328 Pro_T L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 6.89e-01 -0.027 0.0676 0.328 Pro_T L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.98e-01 -0.0963 0.0922 0.325 Treg L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.19e-01 0.0777 0.096 0.325 Treg L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 2.89e-01 -0.0891 0.0837 0.325 Treg L2
ENSG00000120800 UTP20 360237 sc-eQTL 4.49e-01 -0.0693 0.0913 0.325 Treg L2
ENSG00000120805 ARL1 232570 sc-eQTL 6.19e-01 -0.047 0.0945 0.325 Treg L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 9.85e-01 0.0014 0.0768 0.325 Treg L2
ENSG00000075188 NUP37 -479778 sc-eQTL 4.77e-01 -0.0623 0.0875 0.317 cDC L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.33e-01 0.0671 0.0853 0.317 cDC L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.96e-03 -0.295 0.108 0.317 cDC L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.30e-01 -0.151 0.0993 0.317 cDC L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.05e-01 -0.106 0.103 0.317 cDC L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 3.83e-01 -0.0849 0.0971 0.317 cDC L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 4.01e-01 -0.0637 0.0757 0.317 cDC L2
ENSG00000185480 PARPBP -479843 sc-eQTL 2.90e-01 0.0914 0.0862 0.317 cDC L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.37e-01 0.0996 0.0841 0.325 cMono_IL1B L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 9.97e-01 0.000243 0.0636 0.325 cMono_IL1B L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 4.52e-01 0.0635 0.0843 0.325 cMono_IL1B L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.59e-01 -0.134 0.0945 0.325 cMono_IL1B L2
ENSG00000120805 ARL1 232570 sc-eQTL 6.97e-01 -0.0332 0.085 0.325 cMono_IL1B L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 6.63e-01 0.0319 0.0733 0.325 cMono_IL1B L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.41e-01 -0.0595 0.0624 0.325 cMono_IL1B L2
ENSG00000075188 NUP37 -479778 sc-eQTL 8.51e-02 -0.16 0.0923 0.325 cMono_S100A L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 8.26e-01 -0.0157 0.0712 0.325 cMono_S100A L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 5.37e-01 -0.0535 0.0866 0.325 cMono_S100A L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.73e-02 -0.24 0.1 0.325 cMono_S100A L2
ENSG00000120805 ARL1 232570 sc-eQTL 5.14e-01 0.0624 0.0953 0.325 cMono_S100A L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 6.29e-01 -0.0427 0.0882 0.325 cMono_S100A L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.06e-01 -0.0704 0.0686 0.325 cMono_S100A L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.47e-01 -0.136 0.117 0.342 gdT L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 3.02e-01 -0.114 0.11 0.342 gdT L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 1.76e-01 -0.112 0.0824 0.342 gdT L2
ENSG00000120800 UTP20 360237 sc-eQTL 8.74e-02 0.187 0.108 0.342 gdT L2
ENSG00000120805 ARL1 232570 sc-eQTL 8.33e-01 -0.0243 0.115 0.342 gdT L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 2.13e-01 0.133 0.107 0.342 gdT L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 7.57e-01 0.0338 0.109 0.342 gdT L2
ENSG00000185480 PARPBP -479843 sc-eQTL 5.57e-02 -0.204 0.106 0.342 gdT L2
ENSG00000281344 HELLPAR -557243 sc-eQTL 3.32e-01 0.0949 0.0976 0.342 gdT L2
ENSG00000075188 NUP37 -479778 sc-eQTL 9.04e-01 -0.0113 0.094 0.322 intMono L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 7.05e-01 -0.0326 0.086 0.322 intMono L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 7.44e-01 0.033 0.101 0.322 intMono L2
ENSG00000120800 UTP20 360237 sc-eQTL 8.02e-01 0.0238 0.0945 0.322 intMono L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.31e-01 -0.0951 0.0976 0.322 intMono L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.41e-01 -0.0312 0.0946 0.322 intMono L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 5.02e-01 -0.0556 0.0826 0.322 intMono L2
ENSG00000075188 NUP37 -479778 sc-eQTL 2.61e-02 -0.204 0.0911 0.328 ncMono L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 6.21e-01 0.0422 0.0851 0.328 ncMono L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.71e-02 -0.212 0.101 0.328 ncMono L2
ENSG00000120800 UTP20 360237 sc-eQTL 7.90e-01 -0.0237 0.0891 0.328 ncMono L2
ENSG00000120805 ARL1 232570 sc-eQTL 5.97e-01 -0.0454 0.0856 0.328 ncMono L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 2.93e-01 0.0867 0.0822 0.328 ncMono L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.91e-01 0.0658 0.0766 0.328 ncMono L2
ENSG00000075188 NUP37 -479778 sc-eQTL 5.14e-01 -0.0761 0.116 0.314 pDC L2
ENSG00000111666 CHPT1 -56605 sc-eQTL 3.00e-02 0.219 0.1 0.314 pDC L2
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.01e-04 -0.381 0.103 0.314 pDC L2
ENSG00000120800 UTP20 360237 sc-eQTL 1.83e-03 -0.329 0.104 0.314 pDC L2
ENSG00000120805 ARL1 232570 sc-eQTL 3.75e-02 -0.233 0.111 0.314 pDC L2
ENSG00000120860 WASHC3 -421807 sc-eQTL 8.08e-01 -0.0238 0.0981 0.314 pDC L2
ENSG00000136048 DRAM1 -237238 sc-eQTL 7.13e-01 -0.0279 0.0759 0.314 pDC L2
ENSG00000185480 PARPBP -479843 sc-eQTL 7.06e-01 0.0381 0.101 0.314 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -841402 sc-eQTL 3.40e-02 0.0971 0.0455 0.325 B_Memory LOneK1K
ENSG00000075188 NUP37 -479778 sc-eQTL 7.32e-01 -0.0317 0.0924 0.325 B_Memory LOneK1K
ENSG00000111666 CHPT1 -56605 sc-eQTL 8.82e-05 0.187 0.0469 0.325 B_Memory LOneK1K
ENSG00000111670 GNPTAB -190617 sc-eQTL 3.59e-01 -0.0701 0.0763 0.325 B_Memory LOneK1K
ENSG00000120800 UTP20 360237 sc-eQTL 2.49e-01 0.0906 0.0784 0.325 B_Memory LOneK1K
ENSG00000120805 ARL1 232570 sc-eQTL 4.54e-01 0.0667 0.0889 0.325 B_Memory LOneK1K
ENSG00000120860 WASHC3 -421807 sc-eQTL 7.98e-01 -0.017 0.0665 0.325 B_Memory LOneK1K
ENSG00000136048 DRAM1 -237238 sc-eQTL 4.17e-01 0.0647 0.0795 0.325 B_Memory LOneK1K
ENSG00000139351 SYCP3 -99130 sc-eQTL 2.52e-02 0.204 0.0906 0.325 B_Memory LOneK1K
ENSG00000185480 PARPBP -479843 sc-eQTL 9.92e-01 0.000993 0.096 0.325 B_Memory LOneK1K
ENSG00000281344 HELLPAR -557243 sc-eQTL 2.85e-01 0.102 0.0949 0.325 B_Memory LOneK1K
ENSG00000017427 IGF1 -841402 sc-eQTL 4.77e-01 0.0383 0.0537 0.325 B_Naive LOneK1K
ENSG00000075188 NUP37 -479778 sc-eQTL 5.05e-01 -0.0587 0.0879 0.325 B_Naive LOneK1K
ENSG00000111666 CHPT1 -56605 sc-eQTL 1.14e-03 0.14 0.0424 0.325 B_Naive LOneK1K
ENSG00000111670 GNPTAB -190617 sc-eQTL 6.79e-01 0.0258 0.0622 0.325 B_Naive LOneK1K
ENSG00000120800 UTP20 360237 sc-eQTL 6.90e-01 -0.0304 0.0762 0.325 B_Naive LOneK1K
ENSG00000120805 ARL1 232570 sc-eQTL 2.84e-01 -0.0931 0.0867 0.325 B_Naive LOneK1K
ENSG00000120860 WASHC3 -421807 sc-eQTL 5.55e-01 -0.0385 0.0651 0.325 B_Naive LOneK1K
ENSG00000136048 DRAM1 -237238 sc-eQTL 4.95e-01 0.0466 0.0682 0.325 B_Naive LOneK1K
ENSG00000139351 SYCP3 -99130 sc-eQTL 9.42e-01 0.00717 0.0985 0.325 B_Naive LOneK1K
ENSG00000185480 PARPBP -479843 sc-eQTL 5.41e-01 -0.0614 0.1 0.325 B_Naive LOneK1K
ENSG00000281344 HELLPAR -557243 sc-eQTL 9.06e-01 0.0107 0.0913 0.325 B_Naive LOneK1K
ENSG00000075188 NUP37 -479778 sc-eQTL 8.20e-01 0.0177 0.0777 0.325 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -56605 sc-eQTL 9.79e-01 -0.00165 0.0628 0.325 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.76e-01 0.00238 0.0808 0.325 CD14_Mono LOneK1K
ENSG00000120800 UTP20 360237 sc-eQTL 4.00e-02 -0.195 0.0946 0.325 CD14_Mono LOneK1K
ENSG00000120805 ARL1 232570 sc-eQTL 9.76e-01 0.00247 0.0817 0.325 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -421807 sc-eQTL 5.31e-01 -0.0446 0.071 0.325 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -237238 sc-eQTL 3.60e-01 -0.0534 0.0582 0.325 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -479778 sc-eQTL 6.60e-02 -0.162 0.0876 0.325 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -56605 sc-eQTL 5.95e-01 -0.041 0.077 0.325 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -190617 sc-eQTL 9.47e-01 -0.00616 0.0933 0.325 CD16_Mono LOneK1K
ENSG00000120800 UTP20 360237 sc-eQTL 9.31e-01 0.00773 0.0898 0.325 CD16_Mono LOneK1K
ENSG00000120805 ARL1 232570 sc-eQTL 1.82e-01 -0.119 0.0888 0.325 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -421807 sc-eQTL 3.39e-01 0.074 0.0772 0.325 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -237238 sc-eQTL 6.51e-01 0.0302 0.0667 0.325 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -479778 sc-eQTL 5.54e-01 -0.05 0.0843 0.323 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -56605 sc-eQTL 4.95e-02 0.161 0.0816 0.323 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -190617 sc-eQTL 4.58e-01 -0.0419 0.0563 0.323 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 360237 sc-eQTL 5.42e-01 0.0527 0.0864 0.323 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 232570 sc-eQTL 3.50e-01 -0.0751 0.0801 0.323 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -421807 sc-eQTL 5.21e-01 0.0418 0.065 0.323 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -237238 sc-eQTL 1.87e-01 -0.115 0.087 0.323 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -479843 sc-eQTL 5.37e-01 -0.0635 0.103 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -56605 eQTL 4.63e-04 -0.0924 0.0263 0.00102 0.0 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -56605 7.03e-06 9.3e-06 7.79e-07 4.01e-06 1.74e-06 2.7e-06 9.65e-06 1.26e-06 6.17e-06 3.55e-06 9.18e-06 3.67e-06 1.15e-05 3.42e-06 1.37e-06 4.34e-06 3.64e-06 3.84e-06 2.18e-06 2.02e-06 2.85e-06 7.72e-06 5.99e-06 2.01e-06 1.1e-05 2.25e-06 3.35e-06 2.09e-06 7.04e-06 7.57e-06 4.11e-06 4.15e-07 8.05e-07 2.2e-06 2.5e-06 1.33e-06 1.02e-06 4.99e-07 1.09e-06 6.24e-07 4.72e-07 9.56e-06 7.69e-07 1.51e-07 6.98e-07 1.12e-06 1.09e-06 6.9e-07 4.68e-07