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Genes within 1Mb (chr12:101628486:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -853258 sc-eQTL 5.35e-01 0.0248 0.0399 0.333 B L1
ENSG00000075188 NUP37 -491634 sc-eQTL 1.59e-01 -0.0977 0.0691 0.333 B L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 2.07e-04 0.154 0.0409 0.333 B L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 7.66e-01 -0.0182 0.0611 0.333 B L1
ENSG00000120800 UTP20 348381 sc-eQTL 9.66e-01 0.00295 0.0695 0.333 B L1
ENSG00000120805 ARL1 220714 sc-eQTL 7.85e-01 0.0163 0.0597 0.333 B L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.78e-01 -0.0135 0.0478 0.333 B L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 1.87e-01 0.0715 0.054 0.333 B L1
ENSG00000139351 SYCP3 -110986 sc-eQTL 3.12e-01 0.0871 0.0859 0.333 B L1
ENSG00000185480 PARPBP -491699 sc-eQTL 4.74e-01 -0.0591 0.0824 0.333 B L1
ENSG00000281344 HELLPAR -569099 sc-eQTL 4.65e-01 0.0562 0.0768 0.333 B L1
ENSG00000075188 NUP37 -491634 sc-eQTL 7.95e-01 0.0163 0.0629 0.333 CD4T L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 9.22e-02 0.143 0.0843 0.333 CD4T L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.82e-01 0.00133 0.0589 0.333 CD4T L1
ENSG00000120800 UTP20 348381 sc-eQTL 6.53e-01 -0.0293 0.0651 0.333 CD4T L1
ENSG00000120805 ARL1 220714 sc-eQTL 3.04e-01 -0.0655 0.0635 0.333 CD4T L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.07e-01 0.0168 0.0445 0.333 CD4T L1
ENSG00000075188 NUP37 -491634 sc-eQTL 8.89e-01 -0.0109 0.078 0.333 CD8T L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 9.29e-02 0.142 0.084 0.333 CD8T L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 6.63e-02 -0.102 0.0551 0.333 CD8T L1
ENSG00000120800 UTP20 348381 sc-eQTL 7.63e-01 -0.0211 0.0701 0.333 CD8T L1
ENSG00000120805 ARL1 220714 sc-eQTL 5.20e-01 0.0498 0.0772 0.333 CD8T L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 5.41e-01 -0.0336 0.0549 0.333 CD8T L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 8.56e-02 -0.135 0.0781 0.333 CD8T L1
ENSG00000075188 NUP37 -491634 sc-eQTL 5.76e-02 -0.167 0.0876 0.331 DC L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.82e-01 0.108 0.0805 0.331 DC L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.98e-04 -0.317 0.086 0.331 DC L1
ENSG00000120800 UTP20 348381 sc-eQTL 8.24e-02 -0.165 0.0946 0.331 DC L1
ENSG00000120805 ARL1 220714 sc-eQTL 7.86e-02 -0.173 0.0978 0.331 DC L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.05e-01 0.0321 0.0849 0.331 DC L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 3.03e-01 -0.0722 0.0699 0.331 DC L1
ENSG00000185480 PARPBP -491699 sc-eQTL 7.00e-01 0.0356 0.0924 0.331 DC L1
ENSG00000075188 NUP37 -491634 sc-eQTL 7.53e-01 -0.0235 0.0745 0.333 Mono L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.34e-01 -0.0215 0.0631 0.333 Mono L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 7.78e-01 -0.0223 0.0791 0.333 Mono L1
ENSG00000120800 UTP20 348381 sc-eQTL 1.75e-02 -0.209 0.0871 0.333 Mono L1
ENSG00000120805 ARL1 220714 sc-eQTL 7.39e-01 -0.0271 0.0812 0.333 Mono L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.98e-01 -0.000176 0.0715 0.333 Mono L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.44e-01 -0.0678 0.0581 0.333 Mono L1
ENSG00000075188 NUP37 -491634 sc-eQTL 1.49e-01 -0.115 0.0794 0.333 NK L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.22e-01 0.114 0.0737 0.333 NK L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.77e-01 -0.0584 0.0536 0.333 NK L1
ENSG00000120800 UTP20 348381 sc-eQTL 5.33e-01 0.0539 0.0864 0.333 NK L1
ENSG00000120805 ARL1 220714 sc-eQTL 1.99e-01 -0.102 0.0791 0.333 NK L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.30e-01 0.00527 0.0599 0.333 NK L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.93e-01 -0.0897 0.085 0.333 NK L1
ENSG00000185480 PARPBP -491699 sc-eQTL 5.33e-01 -0.0624 0.0999 0.333 NK L1
ENSG00000017427 IGF1 -853258 sc-eQTL 3.95e-01 0.0257 0.0301 0.333 Other_T L1
ENSG00000075188 NUP37 -491634 sc-eQTL 4.92e-01 -0.0395 0.0574 0.333 Other_T L1
ENSG00000111666 CHPT1 -68461 sc-eQTL 4.73e-02 0.166 0.0831 0.333 Other_T L1
ENSG00000111670 GNPTAB -202473 sc-eQTL 6.17e-01 -0.0303 0.0605 0.333 Other_T L1
ENSG00000120800 UTP20 348381 sc-eQTL 6.67e-01 0.0407 0.0945 0.333 Other_T L1
ENSG00000120805 ARL1 220714 sc-eQTL 9.83e-02 0.114 0.0685 0.333 Other_T L1
ENSG00000120860 WASHC3 -433663 sc-eQTL 8.07e-01 0.015 0.0613 0.333 Other_T L1
ENSG00000136048 DRAM1 -249094 sc-eQTL 8.08e-01 0.0178 0.0735 0.333 Other_T L1
ENSG00000185480 PARPBP -491699 sc-eQTL 6.80e-01 -0.0253 0.0612 0.333 Other_T L1
ENSG00000281344 HELLPAR -569099 sc-eQTL 5.78e-01 0.0396 0.0711 0.333 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -853258 sc-eQTL 7.41e-02 0.0352 0.0196 0.324 B_Activated L2
ENSG00000075188 NUP37 -491634 sc-eQTL 7.55e-01 0.0321 0.102 0.324 B_Activated L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.68e-02 0.134 0.0751 0.324 B_Activated L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.95e-01 0.0573 0.108 0.324 B_Activated L2
ENSG00000120800 UTP20 348381 sc-eQTL 5.19e-01 0.0672 0.104 0.324 B_Activated L2
ENSG00000120805 ARL1 220714 sc-eQTL 6.93e-01 0.0425 0.107 0.324 B_Activated L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 1.79e-01 -0.137 0.102 0.324 B_Activated L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.27e-01 0.124 0.102 0.324 B_Activated L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 4.22e-02 0.171 0.0835 0.324 B_Activated L2
ENSG00000185480 PARPBP -491699 sc-eQTL 5.11e-01 0.056 0.0849 0.324 B_Activated L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 8.45e-01 -0.0156 0.0799 0.324 B_Activated L2
ENSG00000017427 IGF1 -853258 sc-eQTL 3.55e-01 0.0361 0.0389 0.333 B_Intermediate L2
ENSG00000075188 NUP37 -491634 sc-eQTL 3.23e-01 -0.0961 0.0969 0.333 B_Intermediate L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 3.64e-04 0.183 0.0506 0.333 B_Intermediate L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 3.77e-01 -0.0681 0.077 0.333 B_Intermediate L2
ENSG00000120800 UTP20 348381 sc-eQTL 2.38e-01 0.101 0.0854 0.333 B_Intermediate L2
ENSG00000120805 ARL1 220714 sc-eQTL 2.37e-01 0.114 0.0961 0.333 B_Intermediate L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 8.82e-01 0.0119 0.0797 0.333 B_Intermediate L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.21e-01 0.0549 0.0854 0.333 B_Intermediate L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 6.83e-02 0.163 0.0892 0.333 B_Intermediate L2
ENSG00000185480 PARPBP -491699 sc-eQTL 4.58e-01 -0.07 0.0942 0.333 B_Intermediate L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 7.82e-01 0.025 0.0904 0.333 B_Intermediate L2
ENSG00000017427 IGF1 -853258 sc-eQTL 1.40e-01 0.0542 0.0366 0.334 B_Memory L2
ENSG00000075188 NUP37 -491634 sc-eQTL 6.18e-01 0.0485 0.0971 0.334 B_Memory L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 4.29e-02 0.128 0.0628 0.334 B_Memory L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.52e-01 -0.0517 0.0868 0.334 B_Memory L2
ENSG00000120800 UTP20 348381 sc-eQTL 2.83e-01 -0.102 0.0951 0.334 B_Memory L2
ENSG00000120805 ARL1 220714 sc-eQTL 8.79e-01 -0.0144 0.0948 0.334 B_Memory L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.80e-01 -0.00208 0.0848 0.334 B_Memory L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.70e-01 0.0506 0.0888 0.334 B_Memory L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 4.23e-02 0.185 0.0906 0.334 B_Memory L2
ENSG00000185480 PARPBP -491699 sc-eQTL 6.94e-01 0.0368 0.0936 0.334 B_Memory L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 3.74e-01 0.0758 0.0851 0.334 B_Memory L2
ENSG00000017427 IGF1 -853258 sc-eQTL 3.99e-01 0.0425 0.0503 0.333 B_Naive1 L2
ENSG00000075188 NUP37 -491634 sc-eQTL 6.18e-01 -0.0455 0.0912 0.333 B_Naive1 L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.56e-03 0.148 0.0463 0.333 B_Naive1 L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.04e-01 0.0081 0.0671 0.333 B_Naive1 L2
ENSG00000120800 UTP20 348381 sc-eQTL 8.06e-01 0.0196 0.0796 0.333 B_Naive1 L2
ENSG00000120805 ARL1 220714 sc-eQTL 3.90e-01 -0.0764 0.0887 0.333 B_Naive1 L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 2.10e-01 -0.0843 0.067 0.333 B_Naive1 L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 7.63e-02 0.129 0.0724 0.333 B_Naive1 L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 5.61e-01 0.0575 0.0989 0.333 B_Naive1 L2
ENSG00000185480 PARPBP -491699 sc-eQTL 5.42e-01 -0.0589 0.0963 0.333 B_Naive1 L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 3.06e-01 -0.0923 0.09 0.333 B_Naive1 L2
ENSG00000017427 IGF1 -853258 sc-eQTL 7.50e-01 0.0139 0.0436 0.333 B_Naive2 L2
ENSG00000075188 NUP37 -491634 sc-eQTL 8.82e-01 0.0132 0.0893 0.333 B_Naive2 L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.61e-02 0.114 0.0472 0.333 B_Naive2 L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 7.68e-01 0.0219 0.0741 0.333 B_Naive2 L2
ENSG00000120800 UTP20 348381 sc-eQTL 3.67e-01 -0.0776 0.0858 0.333 B_Naive2 L2
ENSG00000120805 ARL1 220714 sc-eQTL 7.99e-01 0.024 0.0943 0.333 B_Naive2 L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 8.11e-01 0.0197 0.0822 0.333 B_Naive2 L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.16e-01 -0.0528 0.0813 0.333 B_Naive2 L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 6.21e-01 -0.0424 0.0856 0.333 B_Naive2 L2
ENSG00000185480 PARPBP -491699 sc-eQTL 5.02e-01 -0.0663 0.0987 0.333 B_Naive2 L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 8.94e-01 0.0114 0.0852 0.333 B_Naive2 L2
ENSG00000075188 NUP37 -491634 sc-eQTL 5.33e-01 0.0599 0.0959 0.334 CD4_CTL L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.87e-01 0.127 0.0958 0.334 CD4_CTL L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.98e-01 -0.0875 0.0839 0.334 CD4_CTL L2
ENSG00000120800 UTP20 348381 sc-eQTL 2.12e-01 -0.115 0.0921 0.334 CD4_CTL L2
ENSG00000120805 ARL1 220714 sc-eQTL 1.50e-02 0.237 0.0966 0.334 CD4_CTL L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.69e-01 0.00361 0.094 0.334 CD4_CTL L2
ENSG00000075188 NUP37 -491634 sc-eQTL 8.67e-01 0.0121 0.0724 0.333 CD4_Naive L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.60e-01 0.117 0.0832 0.333 CD4_Naive L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 7.11e-01 -0.0239 0.0644 0.333 CD4_Naive L2
ENSG00000120800 UTP20 348381 sc-eQTL 5.85e-01 -0.0384 0.0701 0.333 CD4_Naive L2
ENSG00000120805 ARL1 220714 sc-eQTL 7.12e-01 -0.0281 0.076 0.333 CD4_Naive L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.60e-01 -0.00265 0.0531 0.333 CD4_Naive L2
ENSG00000075188 NUP37 -491634 sc-eQTL 6.29e-01 -0.0367 0.0759 0.333 CD4_TCM L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 6.40e-02 0.162 0.0869 0.333 CD4_TCM L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 1.56e-01 0.0961 0.0675 0.333 CD4_TCM L2
ENSG00000120800 UTP20 348381 sc-eQTL 6.11e-01 0.0432 0.0848 0.333 CD4_TCM L2
ENSG00000120805 ARL1 220714 sc-eQTL 3.01e-01 -0.0821 0.0792 0.333 CD4_TCM L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.41e-01 0.0172 0.0521 0.333 CD4_TCM L2
ENSG00000075188 NUP37 -491634 sc-eQTL 7.25e-01 -0.032 0.0908 0.333 CD4_TEM L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 6.98e-02 0.158 0.0867 0.333 CD4_TEM L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.09e-01 -0.00963 0.0841 0.333 CD4_TEM L2
ENSG00000120800 UTP20 348381 sc-eQTL 6.60e-01 0.0401 0.091 0.333 CD4_TEM L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.51e-01 -0.0513 0.0859 0.333 CD4_TEM L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 4.96e-01 0.0524 0.077 0.333 CD4_TEM L2
ENSG00000075188 NUP37 -491634 sc-eQTL 9.08e-01 -0.00959 0.0828 0.333 CD8_CTL L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.99e-01 0.109 0.0846 0.333 CD8_CTL L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.75e-01 -0.0742 0.0677 0.333 CD8_CTL L2
ENSG00000120800 UTP20 348381 sc-eQTL 9.37e-01 -0.00727 0.0918 0.333 CD8_CTL L2
ENSG00000120805 ARL1 220714 sc-eQTL 8.09e-01 0.022 0.0908 0.333 CD8_CTL L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 3.63e-01 0.0706 0.0773 0.333 CD8_CTL L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 1.87e-01 -0.127 0.096 0.333 CD8_CTL L2
ENSG00000075188 NUP37 -491634 sc-eQTL 8.42e-01 0.0173 0.087 0.333 CD8_Naive L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 2.11e-01 0.108 0.0862 0.333 CD8_Naive L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 1.92e-01 -0.101 0.0774 0.333 CD8_Naive L2
ENSG00000120800 UTP20 348381 sc-eQTL 9.11e-02 -0.139 0.082 0.333 CD8_Naive L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.54e-01 0.0672 0.0895 0.333 CD8_Naive L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 3.58e-01 -0.0543 0.0589 0.333 CD8_Naive L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 1.27e-01 -0.139 0.0907 0.333 CD8_Naive L2
ENSG00000075188 NUP37 -491634 sc-eQTL 7.62e-01 0.0289 0.0952 0.336 CD8_TCM L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.12e-01 0.135 0.0848 0.336 CD8_TCM L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 1.47e-01 -0.128 0.0878 0.336 CD8_TCM L2
ENSG00000120800 UTP20 348381 sc-eQTL 5.18e-01 -0.0622 0.0962 0.336 CD8_TCM L2
ENSG00000120805 ARL1 220714 sc-eQTL 9.64e-01 0.00428 0.0946 0.336 CD8_TCM L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 3.22e-01 -0.084 0.0845 0.336 CD8_TCM L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.48e-01 -0.107 0.092 0.336 CD8_TCM L2
ENSG00000075188 NUP37 -491634 sc-eQTL 8.02e-01 -0.0232 0.0925 0.34 CD8_TEM L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 8.91e-01 0.012 0.0875 0.34 CD8_TEM L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.29e-01 0.113 0.0934 0.34 CD8_TEM L2
ENSG00000120800 UTP20 348381 sc-eQTL 3.85e-01 0.0873 0.1 0.34 CD8_TEM L2
ENSG00000120805 ARL1 220714 sc-eQTL 2.16e-01 0.119 0.0958 0.34 CD8_TEM L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 3.88e-02 -0.173 0.0831 0.34 CD8_TEM L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.80e-01 -0.0514 0.0926 0.34 CD8_TEM L2
ENSG00000017427 IGF1 -853258 sc-eQTL 5.99e-01 -0.0174 0.0331 0.331 MAIT L2
ENSG00000075188 NUP37 -491634 sc-eQTL 2.75e-01 -0.101 0.0926 0.331 MAIT L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 9.92e-02 0.149 0.0899 0.331 MAIT L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 3.38e-01 -0.0769 0.0801 0.331 MAIT L2
ENSG00000120800 UTP20 348381 sc-eQTL 8.22e-01 0.0216 0.0962 0.331 MAIT L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.48e-01 0.0745 0.098 0.331 MAIT L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.73e-01 -0.0235 0.0815 0.331 MAIT L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 8.08e-01 0.0225 0.0925 0.331 MAIT L2
ENSG00000185480 PARPBP -491699 sc-eQTL 1.97e-01 0.117 0.0903 0.331 MAIT L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 8.57e-01 -0.0145 0.0802 0.331 MAIT L2
ENSG00000075188 NUP37 -491634 sc-eQTL 1.63e-01 -0.139 0.0996 0.336 NK_CD56bright L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 8.75e-01 0.0114 0.0724 0.336 NK_CD56bright L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.86e-01 -0.0456 0.0836 0.336 NK_CD56bright L2
ENSG00000120800 UTP20 348381 sc-eQTL 8.34e-01 0.0205 0.0977 0.336 NK_CD56bright L2
ENSG00000120805 ARL1 220714 sc-eQTL 1.72e-01 -0.13 0.095 0.336 NK_CD56bright L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.22e-01 -0.00843 0.0863 0.336 NK_CD56bright L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 6.77e-01 0.0379 0.0907 0.336 NK_CD56bright L2
ENSG00000185480 PARPBP -491699 sc-eQTL 9.82e-01 -0.00215 0.0958 0.336 NK_CD56bright L2
ENSG00000075188 NUP37 -491634 sc-eQTL 1.49e-01 -0.127 0.0878 0.332 NK_CD56dim L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 2.44e-01 0.101 0.086 0.332 NK_CD56dim L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.01e-01 -0.0833 0.065 0.332 NK_CD56dim L2
ENSG00000120800 UTP20 348381 sc-eQTL 7.72e-01 0.0263 0.0905 0.332 NK_CD56dim L2
ENSG00000120805 ARL1 220714 sc-eQTL 7.56e-03 -0.232 0.0861 0.332 NK_CD56dim L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.97e-01 0.000248 0.075 0.332 NK_CD56dim L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.30e-01 -0.0572 0.091 0.332 NK_CD56dim L2
ENSG00000185480 PARPBP -491699 sc-eQTL 9.89e-01 0.00147 0.103 0.332 NK_CD56dim L2
ENSG00000075188 NUP37 -491634 sc-eQTL 4.56e-01 -0.067 0.0897 0.34 NK_HLA L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 4.60e-01 0.0681 0.092 0.34 NK_HLA L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 3.69e-01 -0.0665 0.0739 0.34 NK_HLA L2
ENSG00000120800 UTP20 348381 sc-eQTL 6.45e-01 -0.0446 0.0968 0.34 NK_HLA L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.05e-01 0.0824 0.0988 0.34 NK_HLA L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 5.06e-01 -0.0612 0.0918 0.34 NK_HLA L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 5.43e-01 -0.0574 0.0944 0.34 NK_HLA L2
ENSG00000185480 PARPBP -491699 sc-eQTL 5.91e-01 0.05 0.0928 0.34 NK_HLA L2
ENSG00000075188 NUP37 -491634 sc-eQTL 2.50e-01 0.101 0.0877 0.332 NK_cytokine L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 3.81e-02 0.17 0.0815 0.332 NK_cytokine L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 4.00e-01 -0.0527 0.0624 0.332 NK_cytokine L2
ENSG00000120800 UTP20 348381 sc-eQTL 3.33e-01 0.0845 0.087 0.332 NK_cytokine L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.05e-01 0.0731 0.0876 0.332 NK_cytokine L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 4.07e-01 0.0573 0.069 0.332 NK_cytokine L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 8.32e-01 -0.0191 0.09 0.332 NK_cytokine L2
ENSG00000185480 PARPBP -491699 sc-eQTL 6.59e-01 -0.043 0.0971 0.332 NK_cytokine L2
ENSG00000017427 IGF1 -853258 sc-eQTL 4.32e-01 0.0565 0.0715 0.333 PB L2
ENSG00000075188 NUP37 -491634 sc-eQTL 1.24e-01 -0.148 0.0956 0.333 PB L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 8.53e-01 0.0139 0.0749 0.333 PB L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 4.72e-01 0.0775 0.107 0.333 PB L2
ENSG00000120800 UTP20 348381 sc-eQTL 5.18e-01 -0.08 0.123 0.333 PB L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.05e-01 0.0507 0.0759 0.333 PB L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 1.19e-03 0.278 0.0837 0.333 PB L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 7.47e-01 -0.0288 0.089 0.333 PB L2
ENSG00000139351 SYCP3 -110986 sc-eQTL 5.18e-02 0.2 0.102 0.333 PB L2
ENSG00000185480 PARPBP -491699 sc-eQTL 4.37e-01 -0.0738 0.0945 0.333 PB L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 4.79e-01 -0.0621 0.0875 0.333 PB L2
ENSG00000017427 IGF1 -853258 sc-eQTL 3.19e-01 0.0331 0.0331 0.337 Pro_T L2
ENSG00000075188 NUP37 -491634 sc-eQTL 2.53e-01 -0.0766 0.0668 0.337 Pro_T L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.86e-02 0.156 0.0882 0.337 Pro_T L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 4.68e-01 0.0478 0.0656 0.337 Pro_T L2
ENSG00000120800 UTP20 348381 sc-eQTL 3.25e-01 0.0924 0.0936 0.337 Pro_T L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.47e-01 0.054 0.0709 0.337 Pro_T L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 8.94e-01 -0.0103 0.0772 0.337 Pro_T L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 4.22e-01 -0.0531 0.066 0.337 Pro_T L2
ENSG00000185480 PARPBP -491699 sc-eQTL 3.44e-01 -0.058 0.0612 0.337 Pro_T L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 6.99e-01 -0.026 0.067 0.337 Pro_T L2
ENSG00000075188 NUP37 -491634 sc-eQTL 3.81e-01 -0.0808 0.0921 0.333 Treg L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 4.21e-01 0.0772 0.0958 0.333 Treg L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.74e-01 -0.0916 0.0836 0.333 Treg L2
ENSG00000120800 UTP20 348381 sc-eQTL 3.66e-01 -0.0825 0.0911 0.333 Treg L2
ENSG00000120805 ARL1 220714 sc-eQTL 4.62e-01 -0.0695 0.0943 0.333 Treg L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.34e-01 0.00635 0.0767 0.333 Treg L2
ENSG00000075188 NUP37 -491634 sc-eQTL 3.59e-01 -0.0801 0.0872 0.327 cDC L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 3.44e-01 0.0807 0.085 0.327 cDC L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.29e-02 -0.249 0.108 0.327 cDC L2
ENSG00000120800 UTP20 348381 sc-eQTL 1.72e-01 -0.136 0.0992 0.327 cDC L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.14e-01 -0.0674 0.103 0.327 cDC L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 4.75e-01 -0.0694 0.0969 0.327 cDC L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 3.98e-01 -0.0639 0.0755 0.327 cDC L2
ENSG00000185480 PARPBP -491699 sc-eQTL 4.85e-01 0.0603 0.0861 0.327 cDC L2
ENSG00000075188 NUP37 -491634 sc-eQTL 3.53e-01 0.0784 0.0842 0.333 cMono_IL1B L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 8.73e-01 0.0102 0.0636 0.333 cMono_IL1B L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.16e-01 0.0549 0.0843 0.333 cMono_IL1B L2
ENSG00000120800 UTP20 348381 sc-eQTL 7.44e-02 -0.169 0.0942 0.333 cMono_IL1B L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.08e-01 -0.0563 0.0849 0.333 cMono_IL1B L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.84e-01 0.0201 0.0733 0.333 cMono_IL1B L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 3.13e-01 -0.063 0.0624 0.333 cMono_IL1B L2
ENSG00000075188 NUP37 -491634 sc-eQTL 7.26e-02 -0.167 0.0923 0.333 cMono_S100A L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 9.87e-01 0.00112 0.0713 0.333 cMono_S100A L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.34e-01 -0.0539 0.0866 0.333 cMono_S100A L2
ENSG00000120800 UTP20 348381 sc-eQTL 6.14e-03 -0.276 0.0998 0.333 cMono_S100A L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.02e-01 0.0642 0.0954 0.333 cMono_S100A L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.53e-01 -0.00525 0.0883 0.333 cMono_S100A L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.20e-01 -0.0843 0.0686 0.333 cMono_S100A L2
ENSG00000075188 NUP37 -491634 sc-eQTL 1.76e-01 -0.159 0.117 0.348 gdT L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 3.13e-01 -0.111 0.11 0.348 gdT L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 1.43e-01 -0.121 0.0824 0.348 gdT L2
ENSG00000120800 UTP20 348381 sc-eQTL 7.93e-02 0.192 0.109 0.348 gdT L2
ENSG00000120805 ARL1 220714 sc-eQTL 6.68e-01 -0.0494 0.115 0.348 gdT L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 1.99e-01 0.138 0.107 0.348 gdT L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 6.66e-01 0.0471 0.109 0.348 gdT L2
ENSG00000185480 PARPBP -491699 sc-eQTL 6.82e-02 -0.195 0.106 0.348 gdT L2
ENSG00000281344 HELLPAR -569099 sc-eQTL 4.56e-01 0.0732 0.0979 0.348 gdT L2
ENSG00000075188 NUP37 -491634 sc-eQTL 9.33e-01 0.00787 0.0933 0.329 intMono L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 9.86e-01 0.00151 0.0854 0.329 intMono L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 5.14e-01 0.0654 0.1 0.329 intMono L2
ENSG00000120800 UTP20 348381 sc-eQTL 8.97e-01 0.0122 0.0939 0.329 intMono L2
ENSG00000120805 ARL1 220714 sc-eQTL 3.23e-01 -0.096 0.0969 0.329 intMono L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.29e-01 -0.0326 0.0939 0.329 intMono L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 3.37e-01 -0.0787 0.0819 0.329 intMono L2
ENSG00000075188 NUP37 -491634 sc-eQTL 7.87e-02 -0.162 0.0916 0.337 ncMono L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.79e-01 0.024 0.0852 0.337 ncMono L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 1.66e-02 -0.243 0.101 0.337 ncMono L2
ENSG00000120800 UTP20 348381 sc-eQTL 6.93e-01 -0.0352 0.0892 0.337 ncMono L2
ENSG00000120805 ARL1 220714 sc-eQTL 5.34e-01 -0.0535 0.0857 0.337 ncMono L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 2.01e-01 0.106 0.0822 0.337 ncMono L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.87e-01 0.0818 0.0766 0.337 ncMono L2
ENSG00000075188 NUP37 -491634 sc-eQTL 6.32e-01 -0.0562 0.117 0.319 pDC L2
ENSG00000111666 CHPT1 -68461 sc-eQTL 3.85e-02 0.21 0.101 0.319 pDC L2
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.04e-04 -0.353 0.104 0.319 pDC L2
ENSG00000120800 UTP20 348381 sc-eQTL 2.12e-03 -0.326 0.104 0.319 pDC L2
ENSG00000120805 ARL1 220714 sc-eQTL 2.32e-02 -0.255 0.111 0.319 pDC L2
ENSG00000120860 WASHC3 -433663 sc-eQTL 7.49e-01 -0.0317 0.0987 0.319 pDC L2
ENSG00000136048 DRAM1 -249094 sc-eQTL 6.72e-01 -0.0323 0.0763 0.319 pDC L2
ENSG00000185480 PARPBP -491699 sc-eQTL 5.87e-01 0.0552 0.101 0.319 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -853258 sc-eQTL 3.31e-02 0.0974 0.0454 0.333 B_Memory LOneK1K
ENSG00000075188 NUP37 -491634 sc-eQTL 6.06e-01 -0.0475 0.0921 0.333 B_Memory LOneK1K
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.17e-04 0.184 0.0468 0.333 B_Memory LOneK1K
ENSG00000111670 GNPTAB -202473 sc-eQTL 4.10e-01 -0.0628 0.0761 0.333 B_Memory LOneK1K
ENSG00000120800 UTP20 348381 sc-eQTL 3.37e-01 0.0753 0.0783 0.333 B_Memory LOneK1K
ENSG00000120805 ARL1 220714 sc-eQTL 4.26e-01 0.0707 0.0886 0.333 B_Memory LOneK1K
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.22e-01 0.0065 0.0663 0.333 B_Memory LOneK1K
ENSG00000136048 DRAM1 -249094 sc-eQTL 3.14e-01 0.0799 0.0792 0.333 B_Memory LOneK1K
ENSG00000139351 SYCP3 -110986 sc-eQTL 3.39e-02 0.193 0.0905 0.333 B_Memory LOneK1K
ENSG00000185480 PARPBP -491699 sc-eQTL 7.71e-01 0.0279 0.0957 0.333 B_Memory LOneK1K
ENSG00000281344 HELLPAR -569099 sc-eQTL 2.64e-01 0.106 0.0947 0.333 B_Memory LOneK1K
ENSG00000017427 IGF1 -853258 sc-eQTL 2.26e-01 0.065 0.0535 0.333 B_Naive LOneK1K
ENSG00000075188 NUP37 -491634 sc-eQTL 4.81e-01 -0.062 0.0878 0.333 B_Naive LOneK1K
ENSG00000111666 CHPT1 -68461 sc-eQTL 1.15e-03 0.14 0.0423 0.333 B_Naive LOneK1K
ENSG00000111670 GNPTAB -202473 sc-eQTL 4.88e-01 0.0432 0.0621 0.333 B_Naive LOneK1K
ENSG00000120800 UTP20 348381 sc-eQTL 6.40e-01 -0.0356 0.076 0.333 B_Naive LOneK1K
ENSG00000120805 ARL1 220714 sc-eQTL 3.81e-01 -0.076 0.0866 0.333 B_Naive LOneK1K
ENSG00000120860 WASHC3 -433663 sc-eQTL 5.81e-01 -0.0359 0.065 0.333 B_Naive LOneK1K
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.60e-01 0.0768 0.0679 0.333 B_Naive LOneK1K
ENSG00000139351 SYCP3 -110986 sc-eQTL 8.16e-01 0.0229 0.0983 0.333 B_Naive LOneK1K
ENSG00000185480 PARPBP -491699 sc-eQTL 3.90e-01 -0.0861 0.1 0.333 B_Naive LOneK1K
ENSG00000281344 HELLPAR -569099 sc-eQTL 9.64e-01 0.00406 0.0912 0.333 B_Naive LOneK1K
ENSG00000075188 NUP37 -491634 sc-eQTL 9.78e-01 0.00214 0.0777 0.333 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -68461 sc-eQTL 8.46e-01 0.0122 0.0628 0.333 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.28e-01 -0.0073 0.0809 0.333 CD14_Mono LOneK1K
ENSG00000120800 UTP20 348381 sc-eQTL 1.09e-02 -0.242 0.0941 0.333 CD14_Mono LOneK1K
ENSG00000120805 ARL1 220714 sc-eQTL 8.21e-01 -0.0185 0.0817 0.333 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -433663 sc-eQTL 6.05e-01 -0.0368 0.0711 0.333 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.82e-01 -0.0627 0.0582 0.333 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -491634 sc-eQTL 1.85e-01 -0.117 0.088 0.334 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.30e-01 -0.0267 0.0771 0.334 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -202473 sc-eQTL 9.03e-01 0.0114 0.0934 0.334 CD16_Mono LOneK1K
ENSG00000120800 UTP20 348381 sc-eQTL 8.99e-01 -0.0114 0.0898 0.334 CD16_Mono LOneK1K
ENSG00000120805 ARL1 220714 sc-eQTL 1.30e-01 -0.135 0.0887 0.334 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -433663 sc-eQTL 3.00e-01 0.0803 0.0773 0.334 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -249094 sc-eQTL 6.67e-01 0.0288 0.0668 0.334 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -491634 sc-eQTL 3.59e-01 -0.0772 0.084 0.332 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -68461 sc-eQTL 7.44e-02 0.146 0.0815 0.332 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -202473 sc-eQTL 2.36e-01 -0.0667 0.0561 0.332 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 348381 sc-eQTL 3.69e-01 0.0775 0.0861 0.332 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 220714 sc-eQTL 1.62e-01 -0.112 0.0797 0.332 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -433663 sc-eQTL 9.55e-01 -0.0037 0.0649 0.332 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -249094 sc-eQTL 2.61e-01 -0.098 0.0869 0.332 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -491699 sc-eQTL 6.76e-01 -0.0429 0.102 0.332 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -68461 eQTL 3.57e-03 -0.077 0.0264 0.0 0.0 0.333
ENSG00000120800 UTP20 348381 eQTL 0.0495 -0.0235 0.012 0.00101 0.0 0.333

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -68461 7.05e-06 7.41e-06 6.35e-07 3.37e-06 1.63e-06 2.2e-06 9.17e-06 1.17e-06 4.7e-06 3.58e-06 8.05e-06 3.12e-06 1e-05 1.78e-06 1.04e-06 4.08e-06 2.76e-06 3.75e-06 1.66e-06 1.19e-06 2.78e-06 6.89e-06 4.96e-06 1.92e-06 9.63e-06 2.15e-06 2.92e-06 1.74e-06 6.6e-06 6.59e-06 2.6e-06 4.38e-07 4.82e-07 1.96e-06 2.07e-06 1.18e-06 9.11e-07 4.38e-07 9.07e-07 7.73e-07 4.53e-07 8.12e-06 6.14e-07 1.38e-07 7.28e-07 1.32e-06 1.12e-06 5.52e-07 4.67e-07