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Genes within 1Mb (chr12:101621413:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -860331 sc-eQTL 8.29e-01 -0.0085 0.0392 0.316 B L1
ENSG00000075188 NUP37 -498707 sc-eQTL 7.31e-01 -0.0235 0.0682 0.316 B L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 5.56e-03 0.114 0.0407 0.316 B L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.12e-01 0.0222 0.06 0.316 B L1
ENSG00000120800 UTP20 341308 sc-eQTL 3.01e-01 0.0706 0.0681 0.316 B L1
ENSG00000120805 ARL1 213641 sc-eQTL 9.55e-02 -0.0976 0.0583 0.316 B L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 7.79e-02 -0.0826 0.0466 0.316 B L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 1.47e-01 0.0771 0.053 0.316 B L1
ENSG00000139351 SYCP3 -118059 sc-eQTL 6.79e-01 -0.0351 0.0846 0.316 B L1
ENSG00000185480 PARPBP -498772 sc-eQTL 8.97e-01 0.0105 0.081 0.316 B L1
ENSG00000281344 HELLPAR -576172 sc-eQTL 1.20e-01 -0.117 0.0751 0.316 B L1
ENSG00000075188 NUP37 -498707 sc-eQTL 5.34e-01 -0.0385 0.0618 0.316 CD4T L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.06e-01 -0.135 0.083 0.316 CD4T L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 1.17e-01 0.0907 0.0576 0.316 CD4T L1
ENSG00000120800 UTP20 341308 sc-eQTL 4.98e-01 0.0434 0.064 0.316 CD4T L1
ENSG00000120805 ARL1 213641 sc-eQTL 8.84e-01 -0.00918 0.0626 0.316 CD4T L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.57e-01 -0.062 0.0436 0.316 CD4T L1
ENSG00000075188 NUP37 -498707 sc-eQTL 1.58e-02 0.186 0.0764 0.316 CD8T L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.17e-01 -0.104 0.0837 0.316 CD8T L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 4.75e-01 -0.0394 0.0551 0.316 CD8T L1
ENSG00000120800 UTP20 341308 sc-eQTL 4.66e-01 0.0508 0.0695 0.316 CD8T L1
ENSG00000120805 ARL1 213641 sc-eQTL 4.90e-01 0.0531 0.0767 0.316 CD8T L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 2.14e-01 -0.0677 0.0543 0.316 CD8T L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 1.19e-01 -0.122 0.0777 0.316 CD8T L1
ENSG00000075188 NUP37 -498707 sc-eQTL 9.69e-01 0.00341 0.0883 0.315 DC L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.98e-01 -0.000165 0.0807 0.315 DC L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 5.57e-01 -0.0522 0.0887 0.315 DC L1
ENSG00000120800 UTP20 341308 sc-eQTL 5.11e-01 -0.0626 0.0951 0.315 DC L1
ENSG00000120805 ARL1 213641 sc-eQTL 1.45e-02 -0.239 0.097 0.315 DC L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 3.38e-01 -0.0812 0.0846 0.315 DC L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 5.59e-02 -0.133 0.0693 0.315 DC L1
ENSG00000185480 PARPBP -498772 sc-eQTL 8.93e-01 0.0124 0.0923 0.315 DC L1
ENSG00000075188 NUP37 -498707 sc-eQTL 6.09e-01 0.0373 0.0726 0.316 Mono L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 7.71e-01 -0.0179 0.0615 0.316 Mono L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 9.53e-01 -0.00451 0.0772 0.316 Mono L1
ENSG00000120800 UTP20 341308 sc-eQTL 8.65e-01 0.0147 0.086 0.316 Mono L1
ENSG00000120805 ARL1 213641 sc-eQTL 7.27e-01 0.0276 0.0792 0.316 Mono L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.93e-01 0.00941 0.0697 0.316 Mono L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 7.97e-01 -0.0146 0.0568 0.316 Mono L1
ENSG00000075188 NUP37 -498707 sc-eQTL 8.66e-01 0.0133 0.0791 0.313 NK L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.24e-01 -0.113 0.0731 0.313 NK L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 1.53e-01 -0.076 0.053 0.313 NK L1
ENSG00000120800 UTP20 341308 sc-eQTL 4.52e-01 0.0644 0.0856 0.313 NK L1
ENSG00000120805 ARL1 213641 sc-eQTL 7.06e-01 -0.0297 0.0787 0.313 NK L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 6.09e-01 -0.0304 0.0593 0.313 NK L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.40e-01 -0.017 0.0845 0.313 NK L1
ENSG00000185480 PARPBP -498772 sc-eQTL 5.40e-01 -0.0609 0.099 0.313 NK L1
ENSG00000017427 IGF1 -860331 sc-eQTL 2.86e-01 0.0316 0.0296 0.316 Other_T L1
ENSG00000075188 NUP37 -498707 sc-eQTL 6.46e-02 -0.104 0.0561 0.316 Other_T L1
ENSG00000111666 CHPT1 -75534 sc-eQTL 8.13e-01 0.0196 0.0826 0.316 Other_T L1
ENSG00000111670 GNPTAB -209546 sc-eQTL 6.79e-02 0.109 0.0592 0.316 Other_T L1
ENSG00000120800 UTP20 341308 sc-eQTL 9.68e-01 -0.00378 0.0931 0.316 Other_T L1
ENSG00000120805 ARL1 213641 sc-eQTL 4.55e-01 0.0508 0.0678 0.316 Other_T L1
ENSG00000120860 WASHC3 -440736 sc-eQTL 9.27e-01 -0.00554 0.0603 0.316 Other_T L1
ENSG00000136048 DRAM1 -256167 sc-eQTL 5.42e-01 -0.0442 0.0723 0.316 Other_T L1
ENSG00000185480 PARPBP -498772 sc-eQTL 9.64e-02 0.1 0.0599 0.316 Other_T L1
ENSG00000281344 HELLPAR -576172 sc-eQTL 3.09e-01 0.0714 0.0699 0.316 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -860331 sc-eQTL 5.55e-01 0.0112 0.0189 0.311 B_Activated L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.99e-01 0.0516 0.0979 0.311 B_Activated L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 7.00e-03 0.193 0.0709 0.311 B_Activated L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.33e-01 0.0351 0.103 0.311 B_Activated L2
ENSG00000120800 UTP20 341308 sc-eQTL 5.38e-01 -0.0613 0.0994 0.311 B_Activated L2
ENSG00000120805 ARL1 213641 sc-eQTL 2.26e-01 -0.124 0.102 0.311 B_Activated L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.50e-01 -0.141 0.0973 0.311 B_Activated L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 3.23e-01 0.0971 0.098 0.311 B_Activated L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 3.08e-02 0.173 0.0797 0.311 B_Activated L2
ENSG00000185480 PARPBP -498772 sc-eQTL 5.12e-01 -0.0534 0.0812 0.311 B_Activated L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 9.40e-01 -0.00579 0.0764 0.311 B_Activated L2
ENSG00000017427 IGF1 -860331 sc-eQTL 8.25e-01 0.00869 0.0391 0.315 B_Intermediate L2
ENSG00000075188 NUP37 -498707 sc-eQTL 4.18e-01 -0.079 0.0973 0.315 B_Intermediate L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.96e-02 0.121 0.0516 0.315 B_Intermediate L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 6.71e-01 -0.0329 0.0773 0.315 B_Intermediate L2
ENSG00000120800 UTP20 341308 sc-eQTL 2.18e-01 0.106 0.0856 0.315 B_Intermediate L2
ENSG00000120805 ARL1 213641 sc-eQTL 4.78e-01 -0.0687 0.0966 0.315 B_Intermediate L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 5.56e-01 -0.0471 0.0798 0.315 B_Intermediate L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 2.26e-01 0.104 0.0854 0.315 B_Intermediate L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 8.18e-01 -0.0208 0.0901 0.315 B_Intermediate L2
ENSG00000185480 PARPBP -498772 sc-eQTL 7.74e-01 -0.0272 0.0946 0.315 B_Intermediate L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 7.13e-01 -0.0334 0.0907 0.315 B_Intermediate L2
ENSG00000017427 IGF1 -860331 sc-eQTL 9.41e-01 -0.00265 0.0361 0.317 B_Memory L2
ENSG00000075188 NUP37 -498707 sc-eQTL 6.91e-01 0.0379 0.0952 0.317 B_Memory L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 8.21e-01 0.0141 0.0622 0.317 B_Memory L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 6.80e-01 -0.0351 0.0851 0.317 B_Memory L2
ENSG00000120800 UTP20 341308 sc-eQTL 6.77e-01 0.0389 0.0934 0.317 B_Memory L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.03e-01 0.0113 0.0929 0.317 B_Memory L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 5.63e-02 -0.158 0.0824 0.317 B_Memory L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 5.40e-01 -0.0535 0.0871 0.317 B_Memory L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 7.87e-01 0.0243 0.0897 0.317 B_Memory L2
ENSG00000185480 PARPBP -498772 sc-eQTL 6.65e-01 0.0398 0.0917 0.317 B_Memory L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 1.71e-01 -0.114 0.0832 0.317 B_Memory L2
ENSG00000017427 IGF1 -860331 sc-eQTL 5.85e-01 0.0269 0.0493 0.316 B_Naive1 L2
ENSG00000075188 NUP37 -498707 sc-eQTL 9.76e-01 -0.00274 0.0892 0.316 B_Naive1 L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.41e-03 0.139 0.0454 0.316 B_Naive1 L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 9.68e-01 -0.00261 0.0656 0.316 B_Naive1 L2
ENSG00000120800 UTP20 341308 sc-eQTL 8.33e-02 0.135 0.0773 0.316 B_Naive1 L2
ENSG00000120805 ARL1 213641 sc-eQTL 8.34e-01 -0.0183 0.0869 0.316 B_Naive1 L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.45e-01 -0.0958 0.0654 0.316 B_Naive1 L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.09e-01 0.0172 0.0713 0.316 B_Naive1 L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 4.17e-01 0.0785 0.0967 0.316 B_Naive1 L2
ENSG00000185480 PARPBP -498772 sc-eQTL 8.44e-01 0.0186 0.0943 0.316 B_Naive1 L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 7.04e-03 -0.236 0.0868 0.316 B_Naive1 L2
ENSG00000017427 IGF1 -860331 sc-eQTL 6.37e-01 0.0206 0.0435 0.315 B_Naive2 L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.41e-01 0.0546 0.0892 0.315 B_Naive2 L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 3.68e-02 0.0994 0.0473 0.315 B_Naive2 L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 9.20e-01 0.0074 0.0741 0.315 B_Naive2 L2
ENSG00000120800 UTP20 341308 sc-eQTL 5.37e-01 -0.0531 0.0858 0.315 B_Naive2 L2
ENSG00000120805 ARL1 213641 sc-eQTL 1.14e-01 -0.149 0.0937 0.315 B_Naive2 L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.16e-01 -0.0191 0.0821 0.315 B_Naive2 L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 1.36e-01 0.121 0.0809 0.315 B_Naive2 L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 3.81e-01 -0.075 0.0855 0.315 B_Naive2 L2
ENSG00000185480 PARPBP -498772 sc-eQTL 2.59e-01 0.111 0.0984 0.315 B_Naive2 L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 2.51e-01 0.0977 0.0849 0.315 B_Naive2 L2
ENSG00000075188 NUP37 -498707 sc-eQTL 6.35e-02 0.177 0.095 0.316 CD4_CTL L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 7.93e-01 -0.0253 0.096 0.316 CD4_CTL L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.88e-01 0.0724 0.0838 0.316 CD4_CTL L2
ENSG00000120800 UTP20 341308 sc-eQTL 8.72e-02 -0.157 0.0916 0.316 CD4_CTL L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.28e-01 -0.00886 0.0978 0.316 CD4_CTL L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 9.55e-01 0.00527 0.0938 0.316 CD4_CTL L2
ENSG00000075188 NUP37 -498707 sc-eQTL 7.15e-01 -0.0262 0.0715 0.316 CD4_Naive L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.02e-02 -0.139 0.0819 0.316 CD4_Naive L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 4.36e-01 0.0496 0.0635 0.316 CD4_Naive L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.89e-01 0.000915 0.0693 0.316 CD4_Naive L2
ENSG00000120805 ARL1 213641 sc-eQTL 4.30e-01 0.0592 0.0749 0.316 CD4_Naive L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 3.34e-01 -0.0507 0.0523 0.316 CD4_Naive L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.42e-01 -0.0458 0.075 0.316 CD4_TCM L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.31e-01 -0.13 0.0861 0.316 CD4_TCM L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.94e-02 0.138 0.0664 0.316 CD4_TCM L2
ENSG00000120800 UTP20 341308 sc-eQTL 4.27e-01 0.0666 0.0837 0.316 CD4_TCM L2
ENSG00000120805 ARL1 213641 sc-eQTL 4.77e-01 -0.0559 0.0784 0.316 CD4_TCM L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.20e-02 -0.0894 0.0511 0.316 CD4_TCM L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.89e-01 -0.0483 0.0892 0.316 CD4_TEM L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 4.46e-02 -0.172 0.0851 0.316 CD4_TEM L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 5.94e-01 0.0442 0.0827 0.316 CD4_TEM L2
ENSG00000120800 UTP20 341308 sc-eQTL 1.41e-01 0.132 0.0891 0.316 CD4_TEM L2
ENSG00000120805 ARL1 213641 sc-eQTL 5.83e-01 -0.0465 0.0845 0.316 CD4_TEM L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.57e-01 0.0137 0.0758 0.316 CD4_TEM L2
ENSG00000075188 NUP37 -498707 sc-eQTL 2.29e-02 0.191 0.0832 0.316 CD8_CTL L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.77e-01 -0.0939 0.0862 0.316 CD8_CTL L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 5.30e-01 -0.0435 0.0691 0.316 CD8_CTL L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.75e-01 0.00297 0.0935 0.316 CD8_CTL L2
ENSG00000120805 ARL1 213641 sc-eQTL 7.19e-01 0.0333 0.0924 0.316 CD8_CTL L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 5.54e-01 0.0467 0.0788 0.316 CD8_CTL L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 3.22e-01 -0.0971 0.0979 0.316 CD8_CTL L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.07e-02 0.186 0.0855 0.316 CD8_Naive L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.90e-01 -0.091 0.0857 0.316 CD8_Naive L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.15e-01 -0.0282 0.0772 0.316 CD8_Naive L2
ENSG00000120800 UTP20 341308 sc-eQTL 8.79e-01 -0.0125 0.0821 0.316 CD8_Naive L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.13e-01 0.00976 0.0891 0.316 CD8_Naive L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 2.96e-01 -0.0614 0.0586 0.316 CD8_Naive L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 3.05e-01 -0.0929 0.0904 0.316 CD8_Naive L2
ENSG00000075188 NUP37 -498707 sc-eQTL 6.54e-01 -0.042 0.0935 0.324 CD8_TCM L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 3.51e-01 -0.0782 0.0837 0.324 CD8_TCM L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.87e-01 -0.0235 0.0868 0.324 CD8_TCM L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.51e-01 -0.00579 0.0947 0.324 CD8_TCM L2
ENSG00000120805 ARL1 213641 sc-eQTL 8.86e-01 0.0133 0.093 0.324 CD8_TCM L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.59e-01 -0.117 0.0828 0.324 CD8_TCM L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 5.02e-01 -0.0609 0.0907 0.324 CD8_TCM L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.47e-01 0.0879 0.0932 0.32 CD8_TEM L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 5.67e-01 -0.0506 0.0883 0.32 CD8_TEM L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.71e-01 0.0846 0.0944 0.32 CD8_TEM L2
ENSG00000120800 UTP20 341308 sc-eQTL 8.00e-01 0.0258 0.101 0.32 CD8_TEM L2
ENSG00000120805 ARL1 213641 sc-eQTL 7.12e-01 0.0359 0.097 0.32 CD8_TEM L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.44e-02 -0.206 0.0836 0.32 CD8_TEM L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 4.51e-01 -0.0706 0.0934 0.32 CD8_TEM L2
ENSG00000017427 IGF1 -860331 sc-eQTL 4.97e-01 0.0223 0.0328 0.312 MAIT L2
ENSG00000075188 NUP37 -498707 sc-eQTL 9.02e-02 -0.156 0.0914 0.312 MAIT L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 4.72e-01 0.0645 0.0896 0.312 MAIT L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 4.71e-01 0.0573 0.0794 0.312 MAIT L2
ENSG00000120800 UTP20 341308 sc-eQTL 7.08e-01 -0.0357 0.0953 0.312 MAIT L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.45e-01 -0.00674 0.0973 0.312 MAIT L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 5.06e-01 -0.0538 0.0808 0.312 MAIT L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 4.83e-01 0.0644 0.0916 0.312 MAIT L2
ENSG00000185480 PARPBP -498772 sc-eQTL 1.27e-01 0.137 0.0894 0.312 MAIT L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 5.20e-01 0.0513 0.0795 0.312 MAIT L2
ENSG00000075188 NUP37 -498707 sc-eQTL 9.88e-01 -0.00151 0.101 0.313 NK_CD56bright L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.44e-01 -0.106 0.0725 0.313 NK_CD56bright L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.90e-01 -0.0724 0.0841 0.313 NK_CD56bright L2
ENSG00000120800 UTP20 341308 sc-eQTL 3.41e-01 0.0936 0.0981 0.313 NK_CD56bright L2
ENSG00000120805 ARL1 213641 sc-eQTL 1.55e-01 -0.136 0.0956 0.313 NK_CD56bright L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 9.96e-01 0.000423 0.0868 0.313 NK_CD56bright L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.92e-01 -0.0124 0.0914 0.313 NK_CD56bright L2
ENSG00000185480 PARPBP -498772 sc-eQTL 2.58e-01 -0.109 0.0962 0.313 NK_CD56bright L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.40e-01 0.0535 0.0872 0.312 NK_CD56dim L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 4.85e-01 -0.0596 0.0851 0.312 NK_CD56dim L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.45e-01 -0.0609 0.0643 0.312 NK_CD56dim L2
ENSG00000120800 UTP20 341308 sc-eQTL 5.65e-01 -0.0515 0.0894 0.312 NK_CD56dim L2
ENSG00000120805 ARL1 213641 sc-eQTL 5.13e-02 -0.168 0.0858 0.312 NK_CD56dim L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 9.92e-01 0.000702 0.0742 0.312 NK_CD56dim L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.50e-01 -0.0171 0.09 0.312 NK_CD56dim L2
ENSG00000185480 PARPBP -498772 sc-eQTL 7.06e-01 -0.0383 0.101 0.312 NK_CD56dim L2
ENSG00000075188 NUP37 -498707 sc-eQTL 7.71e-01 -0.0267 0.0916 0.308 NK_HLA L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 6.62e-01 -0.0411 0.094 0.308 NK_HLA L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 8.41e-01 0.0152 0.0756 0.308 NK_HLA L2
ENSG00000120800 UTP20 341308 sc-eQTL 5.69e-01 -0.0563 0.0988 0.308 NK_HLA L2
ENSG00000120805 ARL1 213641 sc-eQTL 2.55e-01 0.115 0.101 0.308 NK_HLA L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 4.68e-01 -0.0681 0.0936 0.308 NK_HLA L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 3.98e-01 -0.0814 0.0962 0.308 NK_HLA L2
ENSG00000185480 PARPBP -498772 sc-eQTL 6.51e-01 -0.0429 0.0947 0.308 NK_HLA L2
ENSG00000075188 NUP37 -498707 sc-eQTL 4.98e-01 0.0599 0.0883 0.312 NK_cytokine L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.22e-01 -0.101 0.0824 0.312 NK_cytokine L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 1.36e-01 -0.0935 0.0625 0.312 NK_cytokine L2
ENSG00000120800 UTP20 341308 sc-eQTL 1.72e-01 0.12 0.0872 0.312 NK_cytokine L2
ENSG00000120805 ARL1 213641 sc-eQTL 1.69e-01 0.121 0.0877 0.312 NK_cytokine L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 3.03e-01 -0.0715 0.0692 0.312 NK_cytokine L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 7.58e-01 0.0279 0.0904 0.312 NK_cytokine L2
ENSG00000185480 PARPBP -498772 sc-eQTL 3.78e-01 0.0862 0.0975 0.312 NK_cytokine L2
ENSG00000017427 IGF1 -860331 sc-eQTL 9.56e-01 -0.00398 0.0725 0.307 PB L2
ENSG00000075188 NUP37 -498707 sc-eQTL 4.13e-01 -0.08 0.0973 0.307 PB L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 7.62e-01 0.0229 0.0757 0.307 PB L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.67e-02 0.225 0.107 0.307 PB L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.00e-01 -0.0158 0.125 0.307 PB L2
ENSG00000120805 ARL1 213641 sc-eQTL 2.15e-01 0.0952 0.0763 0.307 PB L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 7.15e-04 0.293 0.0842 0.307 PB L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.41e-01 -0.0181 0.0899 0.307 PB L2
ENSG00000139351 SYCP3 -118059 sc-eQTL 2.11e-01 0.131 0.104 0.307 PB L2
ENSG00000185480 PARPBP -498772 sc-eQTL 1.63e-01 -0.133 0.0949 0.307 PB L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 5.09e-01 -0.0586 0.0884 0.307 PB L2
ENSG00000017427 IGF1 -860331 sc-eQTL 6.01e-02 0.0615 0.0325 0.32 Pro_T L2
ENSG00000075188 NUP37 -498707 sc-eQTL 1.14e-01 -0.104 0.0657 0.32 Pro_T L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.68e-01 0.00354 0.0877 0.32 Pro_T L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 2.95e-02 0.141 0.0641 0.32 Pro_T L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.03e-02 0.156 0.092 0.32 Pro_T L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.09e-01 -0.008 0.07 0.32 Pro_T L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 7.95e-01 0.0198 0.0761 0.32 Pro_T L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 4.83e-01 -0.0458 0.0652 0.32 Pro_T L2
ENSG00000185480 PARPBP -498772 sc-eQTL 8.76e-01 0.00945 0.0605 0.32 Pro_T L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 9.21e-01 -0.00658 0.0662 0.32 Pro_T L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.83e-02 -0.188 0.0903 0.316 Treg L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.81e-01 -0.127 0.0945 0.316 Treg L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 2.34e-01 -0.0987 0.0827 0.316 Treg L2
ENSG00000120800 UTP20 341308 sc-eQTL 8.14e-01 0.0213 0.0903 0.316 Treg L2
ENSG00000120805 ARL1 213641 sc-eQTL 8.78e-01 -0.0143 0.0934 0.316 Treg L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.59e-01 -0.0135 0.0759 0.316 Treg L2
ENSG00000075188 NUP37 -498707 sc-eQTL 8.16e-01 0.0203 0.0868 0.317 cDC L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.39e-01 0.00653 0.0846 0.317 cDC L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.66e-01 -0.0325 0.109 0.317 cDC L2
ENSG00000120800 UTP20 341308 sc-eQTL 2.86e-01 -0.106 0.0987 0.317 cDC L2
ENSG00000120805 ARL1 213641 sc-eQTL 1.46e-02 -0.249 0.101 0.317 cDC L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 5.25e-02 -0.186 0.0954 0.317 cDC L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 3.84e-01 -0.0654 0.0749 0.317 cDC L2
ENSG00000185480 PARPBP -498772 sc-eQTL 7.20e-01 0.0308 0.0856 0.317 cDC L2
ENSG00000075188 NUP37 -498707 sc-eQTL 5.34e-01 0.0517 0.083 0.316 cMono_IL1B L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 6.94e-01 0.0247 0.0627 0.316 cMono_IL1B L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 5.10e-01 -0.0548 0.0831 0.316 cMono_IL1B L2
ENSG00000120800 UTP20 341308 sc-eQTL 9.50e-01 0.00588 0.0935 0.316 cMono_IL1B L2
ENSG00000120805 ARL1 213641 sc-eQTL 7.58e-01 0.0258 0.0838 0.316 cMono_IL1B L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 6.12e-01 -0.0367 0.0722 0.316 cMono_IL1B L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 1.59e-01 -0.0866 0.0613 0.316 cMono_IL1B L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.46e-01 0.0852 0.0902 0.316 cMono_S100A L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.66e-01 0.00296 0.0693 0.316 cMono_S100A L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 6.47e-01 0.0386 0.0843 0.316 cMono_S100A L2
ENSG00000120800 UTP20 341308 sc-eQTL 3.66e-01 -0.0893 0.0986 0.316 cMono_S100A L2
ENSG00000120805 ARL1 213641 sc-eQTL 3.75e-01 0.0824 0.0927 0.316 cMono_S100A L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 2.72e-01 0.0942 0.0856 0.316 cMono_S100A L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 4.07e-01 -0.0555 0.0668 0.316 cMono_S100A L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.32e-01 -0.112 0.115 0.318 gdT L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 1.10e-01 -0.172 0.107 0.318 gdT L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 2.56e-01 0.0923 0.081 0.318 gdT L2
ENSG00000120800 UTP20 341308 sc-eQTL 4.24e-01 -0.086 0.107 0.318 gdT L2
ENSG00000120805 ARL1 213641 sc-eQTL 5.74e-01 0.0635 0.113 0.318 gdT L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 7.79e-01 0.0296 0.105 0.318 gdT L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 8.55e-02 -0.183 0.106 0.318 gdT L2
ENSG00000185480 PARPBP -498772 sc-eQTL 1.41e-01 0.154 0.104 0.318 gdT L2
ENSG00000281344 HELLPAR -576172 sc-eQTL 4.13e-01 0.0787 0.0958 0.318 gdT L2
ENSG00000075188 NUP37 -498707 sc-eQTL 2.72e-01 0.102 0.0929 0.311 intMono L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 7.26e-01 -0.0299 0.0852 0.311 intMono L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 3.01e-01 -0.103 0.0998 0.311 intMono L2
ENSG00000120800 UTP20 341308 sc-eQTL 3.27e-01 0.0918 0.0934 0.311 intMono L2
ENSG00000120805 ARL1 213641 sc-eQTL 5.13e-01 -0.0634 0.0968 0.311 intMono L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 8.09e-01 -0.0227 0.0937 0.311 intMono L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 7.50e-01 -0.0261 0.0819 0.311 intMono L2
ENSG00000075188 NUP37 -498707 sc-eQTL 2.88e-02 -0.205 0.0931 0.31 ncMono L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.78e-01 0.00243 0.087 0.31 ncMono L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 9.70e-01 0.00393 0.104 0.31 ncMono L2
ENSG00000120800 UTP20 341308 sc-eQTL 2.70e-02 0.2 0.09 0.31 ncMono L2
ENSG00000120805 ARL1 213641 sc-eQTL 9.04e-01 -0.0106 0.0876 0.31 ncMono L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 6.74e-01 0.0355 0.0842 0.31 ncMono L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 1.15e-01 0.123 0.0779 0.31 ncMono L2
ENSG00000075188 NUP37 -498707 sc-eQTL 3.84e-01 -0.0982 0.112 0.308 pDC L2
ENSG00000111666 CHPT1 -75534 sc-eQTL 4.95e-01 0.067 0.0979 0.308 pDC L2
ENSG00000111670 GNPTAB -209546 sc-eQTL 5.67e-02 -0.197 0.103 0.308 pDC L2
ENSG00000120800 UTP20 341308 sc-eQTL 5.51e-02 -0.197 0.102 0.308 pDC L2
ENSG00000120805 ARL1 213641 sc-eQTL 3.07e-02 -0.234 0.107 0.308 pDC L2
ENSG00000120860 WASHC3 -440736 sc-eQTL 2.92e-01 -0.0999 0.0945 0.308 pDC L2
ENSG00000136048 DRAM1 -256167 sc-eQTL 5.56e-01 -0.0432 0.0733 0.308 pDC L2
ENSG00000185480 PARPBP -498772 sc-eQTL 5.64e-01 -0.0563 0.0973 0.308 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -860331 sc-eQTL 9.24e-01 0.00431 0.0453 0.316 B_Memory LOneK1K
ENSG00000075188 NUP37 -498707 sc-eQTL 7.58e-01 -0.028 0.0909 0.316 B_Memory LOneK1K
ENSG00000111666 CHPT1 -75534 sc-eQTL 3.70e-02 0.0994 0.0474 0.316 B_Memory LOneK1K
ENSG00000111670 GNPTAB -209546 sc-eQTL 6.88e-01 -0.0303 0.0752 0.316 B_Memory LOneK1K
ENSG00000120800 UTP20 341308 sc-eQTL 2.62e-01 0.0868 0.0772 0.316 B_Memory LOneK1K
ENSG00000120805 ARL1 213641 sc-eQTL 4.82e-01 -0.0616 0.0875 0.316 B_Memory LOneK1K
ENSG00000120860 WASHC3 -440736 sc-eQTL 1.91e-01 -0.0855 0.0651 0.316 B_Memory LOneK1K
ENSG00000136048 DRAM1 -256167 sc-eQTL 2.49e-01 0.0903 0.0781 0.316 B_Memory LOneK1K
ENSG00000139351 SYCP3 -118059 sc-eQTL 5.69e-01 -0.0515 0.0902 0.316 B_Memory LOneK1K
ENSG00000185480 PARPBP -498772 sc-eQTL 7.65e-01 0.0283 0.0945 0.316 B_Memory LOneK1K
ENSG00000281344 HELLPAR -576172 sc-eQTL 3.34e-01 -0.0905 0.0935 0.316 B_Memory LOneK1K
ENSG00000017427 IGF1 -860331 sc-eQTL 5.57e-01 0.0309 0.0526 0.316 B_Naive LOneK1K
ENSG00000075188 NUP37 -498707 sc-eQTL 9.72e-01 0.00305 0.0861 0.316 B_Naive LOneK1K
ENSG00000111666 CHPT1 -75534 sc-eQTL 6.03e-03 0.116 0.0417 0.316 B_Naive LOneK1K
ENSG00000111670 GNPTAB -209546 sc-eQTL 4.61e-01 0.0449 0.0608 0.316 B_Naive LOneK1K
ENSG00000120800 UTP20 341308 sc-eQTL 6.99e-01 0.0289 0.0745 0.316 B_Naive LOneK1K
ENSG00000120805 ARL1 213641 sc-eQTL 1.63e-01 -0.119 0.0846 0.316 B_Naive LOneK1K
ENSG00000120860 WASHC3 -440736 sc-eQTL 2.41e-01 -0.0746 0.0635 0.316 B_Naive LOneK1K
ENSG00000136048 DRAM1 -256167 sc-eQTL 2.60e-01 0.0752 0.0665 0.316 B_Naive LOneK1K
ENSG00000139351 SYCP3 -118059 sc-eQTL 7.71e-01 0.0281 0.0963 0.316 B_Naive LOneK1K
ENSG00000185480 PARPBP -498772 sc-eQTL 5.62e-01 0.0569 0.098 0.316 B_Naive LOneK1K
ENSG00000281344 HELLPAR -576172 sc-eQTL 6.03e-01 -0.0464 0.0892 0.316 B_Naive LOneK1K
ENSG00000075188 NUP37 -498707 sc-eQTL 2.84e-01 0.0819 0.0762 0.316 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -75534 sc-eQTL 9.88e-01 -0.000943 0.0618 0.316 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.07e-01 -0.03 0.0795 0.316 CD14_Mono LOneK1K
ENSG00000120800 UTP20 341308 sc-eQTL 5.67e-01 -0.0539 0.094 0.316 CD14_Mono LOneK1K
ENSG00000120805 ARL1 213641 sc-eQTL 5.31e-01 0.0505 0.0804 0.316 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -440736 sc-eQTL 9.84e-01 -0.0014 0.07 0.316 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -256167 sc-eQTL 2.71e-01 -0.0631 0.0573 0.316 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -498707 sc-eQTL 2.31e-01 -0.106 0.088 0.312 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -75534 sc-eQTL 3.90e-01 -0.0663 0.077 0.312 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -209546 sc-eQTL 7.92e-01 0.0246 0.0933 0.312 CD16_Mono LOneK1K
ENSG00000120800 UTP20 341308 sc-eQTL 6.79e-03 0.241 0.0882 0.312 CD16_Mono LOneK1K
ENSG00000120805 ARL1 213641 sc-eQTL 3.59e-01 -0.0818 0.089 0.312 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -440736 sc-eQTL 6.02e-01 0.0404 0.0774 0.312 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -256167 sc-eQTL 2.08e-01 0.084 0.0665 0.312 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -498707 sc-eQTL 6.59e-01 0.0369 0.0834 0.312 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -75534 sc-eQTL 2.51e-01 -0.0934 0.0812 0.312 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -209546 sc-eQTL 1.59e-01 -0.0785 0.0555 0.312 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 341308 sc-eQTL 6.42e-01 0.0399 0.0855 0.312 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 213641 sc-eQTL 8.95e-01 -0.0105 0.0794 0.312 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -440736 sc-eQTL 3.93e-01 -0.0549 0.0642 0.312 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -256167 sc-eQTL 9.35e-01 -0.00706 0.0864 0.312 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -498772 sc-eQTL 9.54e-01 -0.00585 0.102 0.312 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -75534 eQTL 2.82e-04 -0.0977 0.0268 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -75534 7.88e-06 1.26e-05 9.65e-07 4.3e-06 1.87e-06 2.32e-06 9.71e-06 1.54e-06 6.18e-06 4.42e-06 1.08e-05 4.54e-06 1.15e-05 3.79e-06 2.2e-06 4.71e-06 3.71e-06 3.94e-06 2.2e-06 1.72e-06 3.51e-06 7.98e-06 6.46e-06 1.99e-06 1.08e-05 2.68e-06 3.08e-06 3.27e-06 7.05e-06 7.04e-06 5.4e-06 4.81e-07 7.57e-07 2.16e-06 2.82e-06 1.09e-06 1.23e-06 1.08e-06 1.12e-06 7.91e-07 2.22e-07 1.17e-05 1.49e-06 1.99e-07 6.07e-07 8.35e-07 1.09e-06 7.43e-07 3.9e-07
ENSG00000258230 \N -152342 3.21e-06 4.67e-06 2.71e-07 1.99e-06 4.9e-07 6.91e-07 1.53e-06 4.23e-07 1.65e-06 9.55e-07 2.45e-06 1.43e-06 4.18e-06 1.24e-06 9.01e-07 1.04e-06 1.07e-06 1.9e-06 7.66e-07 5.47e-07 6.53e-07 2.77e-06 2.13e-06 9.82e-07 2.93e-06 1.22e-06 1.01e-06 1.44e-06 1.73e-06 1.63e-06 1.98e-06 2.5e-07 3.32e-07 1.1e-06 1.27e-06 6.18e-07 9.08e-07 4.47e-07 6.79e-07 2.09e-07 2.56e-07 3.71e-06 4.01e-07 6.49e-08 2.83e-07 3.62e-07 2.42e-07 2.4e-07 2.83e-07