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Genes within 1Mb (chr12:101620249:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -861495 sc-eQTL 5.22e-01 -0.0245 0.0382 0.598 B L1
ENSG00000075188 NUP37 -499871 sc-eQTL 7.18e-01 0.024 0.0665 0.598 B L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.25e-01 0.0143 0.0404 0.598 B L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.87e-01 0.0772 0.0583 0.598 B L1
ENSG00000120800 UTP20 340144 sc-eQTL 4.88e-01 -0.0462 0.0665 0.598 B L1
ENSG00000120805 ARL1 212477 sc-eQTL 7.62e-01 -0.0173 0.0572 0.598 B L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 6.34e-01 -0.0218 0.0457 0.598 B L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.18e-01 0.081 0.0516 0.598 B L1
ENSG00000139351 SYCP3 -119223 sc-eQTL 4.51e-01 -0.0622 0.0824 0.598 B L1
ENSG00000185480 PARPBP -499936 sc-eQTL 6.12e-01 0.0401 0.0789 0.598 B L1
ENSG00000281344 HELLPAR -577336 sc-eQTL 1.10e-01 -0.117 0.0732 0.598 B L1
ENSG00000075188 NUP37 -499871 sc-eQTL 1.63e-01 -0.0852 0.0609 0.598 CD4T L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.52e-02 -0.147 0.082 0.598 CD4T L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.41e-02 0.14 0.0565 0.598 CD4T L1
ENSG00000120800 UTP20 340144 sc-eQTL 7.93e-01 0.0167 0.0633 0.598 CD4T L1
ENSG00000120805 ARL1 212477 sc-eQTL 4.12e-01 0.0508 0.0618 0.598 CD4T L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 6.28e-02 -0.0804 0.043 0.598 CD4T L1
ENSG00000075188 NUP37 -499871 sc-eQTL 1.18e-02 0.19 0.0747 0.598 CD8T L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.45e-01 -0.0955 0.0819 0.598 CD8T L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 4.41e-01 0.0416 0.0539 0.598 CD8T L1
ENSG00000120800 UTP20 340144 sc-eQTL 6.39e-01 0.0319 0.0681 0.598 CD8T L1
ENSG00000120805 ARL1 212477 sc-eQTL 9.80e-01 0.00188 0.0751 0.598 CD8T L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 4.08e-01 -0.0442 0.0533 0.598 CD8T L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 6.06e-01 0.0395 0.0764 0.598 CD8T L1
ENSG00000075188 NUP37 -499871 sc-eQTL 4.16e-01 -0.07 0.0858 0.601 DC L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.42e-01 -0.115 0.0782 0.601 DC L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 4.10e-01 0.0712 0.0863 0.601 DC L1
ENSG00000120800 UTP20 340144 sc-eQTL 6.26e-01 0.0452 0.0926 0.601 DC L1
ENSG00000120805 ARL1 212477 sc-eQTL 2.71e-01 -0.105 0.0956 0.601 DC L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 5.67e-01 -0.0473 0.0825 0.601 DC L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 3.90e-01 -0.0586 0.068 0.601 DC L1
ENSG00000185480 PARPBP -499936 sc-eQTL 3.05e-01 0.0921 0.0896 0.601 DC L1
ENSG00000075188 NUP37 -499871 sc-eQTL 4.34e-01 0.055 0.0701 0.598 Mono L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 4.00e-01 -0.05 0.0593 0.598 Mono L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.58e-01 -0.0437 0.0745 0.598 Mono L1
ENSG00000120800 UTP20 340144 sc-eQTL 5.32e-03 0.23 0.0816 0.598 Mono L1
ENSG00000120805 ARL1 212477 sc-eQTL 5.11e-01 0.0503 0.0764 0.598 Mono L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 6.30e-01 -0.0324 0.0673 0.598 Mono L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 4.32e-01 -0.0431 0.0548 0.598 Mono L1
ENSG00000075188 NUP37 -499871 sc-eQTL 9.06e-01 0.00922 0.0782 0.597 NK L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 3.57e-03 -0.21 0.0712 0.597 NK L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 9.05e-02 -0.0889 0.0523 0.597 NK L1
ENSG00000120800 UTP20 340144 sc-eQTL 9.80e-02 0.14 0.0841 0.597 NK L1
ENSG00000120805 ARL1 212477 sc-eQTL 4.13e-01 0.0637 0.0777 0.597 NK L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 3.65e-01 -0.0532 0.0586 0.597 NK L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.01e-01 0.137 0.083 0.597 NK L1
ENSG00000185480 PARPBP -499936 sc-eQTL 3.15e-01 0.0984 0.0977 0.597 NK L1
ENSG00000017427 IGF1 -861495 sc-eQTL 2.41e-01 0.034 0.0289 0.598 Other_T L1
ENSG00000075188 NUP37 -499871 sc-eQTL 4.93e-01 -0.038 0.0553 0.598 Other_T L1
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.08e-01 -0.102 0.0805 0.598 Other_T L1
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.04e-02 0.114 0.0578 0.598 Other_T L1
ENSG00000120800 UTP20 340144 sc-eQTL 5.18e-01 -0.0589 0.091 0.598 Other_T L1
ENSG00000120805 ARL1 212477 sc-eQTL 7.78e-01 0.0188 0.0664 0.598 Other_T L1
ENSG00000120860 WASHC3 -441900 sc-eQTL 2.75e-01 -0.0644 0.0588 0.598 Other_T L1
ENSG00000136048 DRAM1 -257331 sc-eQTL 6.53e-01 -0.0318 0.0707 0.598 Other_T L1
ENSG00000185480 PARPBP -499936 sc-eQTL 4.78e-01 0.0418 0.0589 0.598 Other_T L1
ENSG00000281344 HELLPAR -577336 sc-eQTL 5.51e-01 0.0409 0.0685 0.598 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -861495 sc-eQTL 7.25e-01 -0.00672 0.0191 0.594 B_Activated L2
ENSG00000075188 NUP37 -499871 sc-eQTL 8.78e-01 0.0152 0.0991 0.594 B_Activated L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.05e-01 -0.0278 0.0732 0.594 B_Activated L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 2.29e-01 0.125 0.104 0.594 B_Activated L2
ENSG00000120800 UTP20 340144 sc-eQTL 1.87e-01 -0.133 0.1 0.594 B_Activated L2
ENSG00000120805 ARL1 212477 sc-eQTL 5.21e-01 -0.0669 0.104 0.594 B_Activated L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 6.19e-01 0.0493 0.099 0.594 B_Activated L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 3.42e-01 0.0946 0.0992 0.594 B_Activated L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 3.74e-01 0.0726 0.0815 0.594 B_Activated L2
ENSG00000185480 PARPBP -499936 sc-eQTL 5.25e-01 -0.0523 0.0822 0.594 B_Activated L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 4.60e-01 0.0571 0.0772 0.594 B_Activated L2
ENSG00000017427 IGF1 -861495 sc-eQTL 8.49e-01 -0.00739 0.0387 0.597 B_Intermediate L2
ENSG00000075188 NUP37 -499871 sc-eQTL 8.50e-01 0.0182 0.0964 0.597 B_Intermediate L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 5.02e-01 -0.0347 0.0517 0.597 B_Intermediate L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.06e-01 0.0509 0.0764 0.597 B_Intermediate L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.87e-01 0.00141 0.085 0.597 B_Intermediate L2
ENSG00000120805 ARL1 212477 sc-eQTL 9.05e-01 -0.0114 0.0957 0.597 B_Intermediate L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 7.53e-01 0.0249 0.079 0.597 B_Intermediate L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.32e-01 0.128 0.0843 0.597 B_Intermediate L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 2.54e-01 -0.102 0.0889 0.597 B_Intermediate L2
ENSG00000185480 PARPBP -499936 sc-eQTL 5.80e-01 0.0518 0.0935 0.597 B_Intermediate L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 8.34e-01 -0.0188 0.0897 0.597 B_Intermediate L2
ENSG00000017427 IGF1 -861495 sc-eQTL 6.60e-01 -0.0155 0.0351 0.597 B_Memory L2
ENSG00000075188 NUP37 -499871 sc-eQTL 9.44e-01 0.00649 0.0927 0.597 B_Memory L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.58e-03 -0.189 0.0591 0.597 B_Memory L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 6.60e-01 0.0365 0.0828 0.597 B_Memory L2
ENSG00000120800 UTP20 340144 sc-eQTL 8.98e-01 0.0117 0.0909 0.597 B_Memory L2
ENSG00000120805 ARL1 212477 sc-eQTL 1.89e-01 0.119 0.0901 0.597 B_Memory L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 4.04e-01 -0.0675 0.0808 0.597 B_Memory L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 8.92e-01 0.0115 0.0848 0.597 B_Memory L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 8.72e-01 -0.014 0.0873 0.597 B_Memory L2
ENSG00000185480 PARPBP -499936 sc-eQTL 2.25e-01 0.108 0.089 0.597 B_Memory L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 5.33e-01 0.0508 0.0812 0.597 B_Memory L2
ENSG00000017427 IGF1 -861495 sc-eQTL 7.01e-01 0.0187 0.0485 0.598 B_Naive1 L2
ENSG00000075188 NUP37 -499871 sc-eQTL 9.93e-01 0.000731 0.0878 0.598 B_Naive1 L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.64e-01 0.0635 0.0454 0.598 B_Naive1 L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.17e-01 0.0418 0.0645 0.598 B_Naive1 L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.67e-01 0.00321 0.0767 0.598 B_Naive1 L2
ENSG00000120805 ARL1 212477 sc-eQTL 7.74e-01 -0.0245 0.0856 0.598 B_Naive1 L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.07e-01 -0.00759 0.0648 0.598 B_Naive1 L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.10e-01 0.0462 0.0701 0.598 B_Naive1 L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 5.63e-01 0.0552 0.0953 0.598 B_Naive1 L2
ENSG00000185480 PARPBP -499936 sc-eQTL 5.22e-01 0.0595 0.0927 0.598 B_Naive1 L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 2.41e-02 -0.195 0.0859 0.598 B_Naive1 L2
ENSG00000017427 IGF1 -861495 sc-eQTL 8.27e-02 -0.0739 0.0424 0.597 B_Naive2 L2
ENSG00000075188 NUP37 -499871 sc-eQTL 8.02e-01 0.0219 0.0874 0.597 B_Naive2 L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 3.73e-02 0.0971 0.0463 0.597 B_Naive2 L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 7.68e-01 -0.0214 0.0725 0.597 B_Naive2 L2
ENSG00000120800 UTP20 340144 sc-eQTL 1.02e-01 -0.137 0.0836 0.597 B_Naive2 L2
ENSG00000120805 ARL1 212477 sc-eQTL 4.28e-01 -0.0732 0.0922 0.597 B_Naive2 L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.95e-01 -0.000522 0.0804 0.597 B_Naive2 L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 3.82e-01 0.0697 0.0795 0.597 B_Naive2 L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 2.20e-01 -0.103 0.0836 0.597 B_Naive2 L2
ENSG00000185480 PARPBP -499936 sc-eQTL 6.80e-01 -0.04 0.0966 0.597 B_Naive2 L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 4.58e-01 0.0618 0.0832 0.597 B_Naive2 L2
ENSG00000075188 NUP37 -499871 sc-eQTL 9.88e-01 0.00144 0.0937 0.595 CD4_CTL L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.02e-01 -0.12 0.0935 0.595 CD4_CTL L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 3.71e-01 0.0735 0.0819 0.595 CD4_CTL L2
ENSG00000120800 UTP20 340144 sc-eQTL 3.38e-01 -0.0865 0.0901 0.595 CD4_CTL L2
ENSG00000120805 ARL1 212477 sc-eQTL 5.25e-01 -0.0609 0.0956 0.595 CD4_CTL L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 2.28e-01 0.111 0.0914 0.595 CD4_CTL L2
ENSG00000075188 NUP37 -499871 sc-eQTL 2.57e-01 -0.0792 0.0696 0.598 CD4_Naive L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.78e-01 -0.108 0.0802 0.598 CD4_Naive L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 4.43e-03 0.175 0.0609 0.598 CD4_Naive L2
ENSG00000120800 UTP20 340144 sc-eQTL 5.35e-01 0.0419 0.0676 0.598 CD4_Naive L2
ENSG00000120805 ARL1 212477 sc-eQTL 5.65e-01 0.0422 0.0732 0.598 CD4_Naive L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 8.44e-02 -0.0882 0.0509 0.598 CD4_Naive L2
ENSG00000075188 NUP37 -499871 sc-eQTL 2.98e-01 -0.0777 0.0745 0.598 CD4_TCM L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.69e-02 -0.152 0.0855 0.598 CD4_TCM L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.34e-01 0.0415 0.0666 0.598 CD4_TCM L2
ENSG00000120800 UTP20 340144 sc-eQTL 3.47e-01 -0.0785 0.0833 0.598 CD4_TCM L2
ENSG00000120805 ARL1 212477 sc-eQTL 1.85e-01 0.103 0.0778 0.598 CD4_TCM L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 2.97e-01 -0.0534 0.0511 0.598 CD4_TCM L2
ENSG00000075188 NUP37 -499871 sc-eQTL 8.11e-01 -0.0211 0.0882 0.598 CD4_TEM L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.05e-03 -0.227 0.0835 0.598 CD4_TEM L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 9.22e-01 0.00804 0.0818 0.598 CD4_TEM L2
ENSG00000120800 UTP20 340144 sc-eQTL 6.23e-01 0.0436 0.0884 0.598 CD4_TEM L2
ENSG00000120805 ARL1 212477 sc-eQTL 2.76e-01 0.0911 0.0833 0.598 CD4_TEM L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.43e-01 -0.00533 0.0749 0.598 CD4_TEM L2
ENSG00000075188 NUP37 -499871 sc-eQTL 2.09e-01 0.101 0.0803 0.598 CD8_CTL L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.33e-01 -0.124 0.0823 0.598 CD8_CTL L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 9.83e-01 -0.00139 0.0661 0.598 CD8_CTL L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.83e-01 0.00186 0.0895 0.598 CD8_CTL L2
ENSG00000120805 ARL1 212477 sc-eQTL 9.70e-01 -0.0033 0.0885 0.598 CD8_CTL L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.16e-01 0.00793 0.0755 0.598 CD8_CTL L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 7.25e-01 0.033 0.0938 0.598 CD8_CTL L2
ENSG00000075188 NUP37 -499871 sc-eQTL 6.73e-02 0.154 0.084 0.598 CD8_Naive L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 6.11e-01 -0.0428 0.0841 0.598 CD8_Naive L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.31e-01 0.114 0.0751 0.598 CD8_Naive L2
ENSG00000120800 UTP20 340144 sc-eQTL 8.80e-01 0.0122 0.0803 0.598 CD8_Naive L2
ENSG00000120805 ARL1 212477 sc-eQTL 5.97e-01 -0.0461 0.0872 0.598 CD8_Naive L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 7.84e-01 -0.0158 0.0574 0.598 CD8_Naive L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 9.55e-01 0.00498 0.0887 0.598 CD8_Naive L2
ENSG00000075188 NUP37 -499871 sc-eQTL 2.97e-01 0.0953 0.0911 0.604 CD8_TCM L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.90e-01 -0.0867 0.0817 0.604 CD8_TCM L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.55e-01 0.12 0.0844 0.604 CD8_TCM L2
ENSG00000120800 UTP20 340144 sc-eQTL 4.66e-01 -0.0674 0.0924 0.604 CD8_TCM L2
ENSG00000120805 ARL1 212477 sc-eQTL 7.57e-01 -0.0282 0.0908 0.604 CD8_TCM L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 2.74e-01 -0.089 0.0811 0.604 CD8_TCM L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.85e-01 0.0484 0.0886 0.604 CD8_TCM L2
ENSG00000075188 NUP37 -499871 sc-eQTL 6.47e-01 0.0409 0.0891 0.596 CD8_TEM L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.49e-01 -0.027 0.0843 0.596 CD8_TEM L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 4.51e-02 0.18 0.0894 0.596 CD8_TEM L2
ENSG00000120800 UTP20 340144 sc-eQTL 5.96e-01 -0.0514 0.0968 0.596 CD8_TEM L2
ENSG00000120805 ARL1 212477 sc-eQTL 8.08e-01 -0.0226 0.0926 0.596 CD8_TEM L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 1.85e-02 -0.19 0.0798 0.596 CD8_TEM L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.93e-01 0.0478 0.0892 0.596 CD8_TEM L2
ENSG00000017427 IGF1 -861495 sc-eQTL 2.35e-01 0.038 0.032 0.595 MAIT L2
ENSG00000075188 NUP37 -499871 sc-eQTL 2.31e-01 -0.108 0.0897 0.595 MAIT L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 8.35e-01 -0.0183 0.0877 0.595 MAIT L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.04e-01 0.126 0.0773 0.595 MAIT L2
ENSG00000120800 UTP20 340144 sc-eQTL 5.47e-01 -0.0562 0.0931 0.595 MAIT L2
ENSG00000120805 ARL1 212477 sc-eQTL 9.57e-01 -0.0051 0.0951 0.595 MAIT L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 1.32e-01 -0.119 0.0786 0.595 MAIT L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 9.88e-01 -0.00132 0.0897 0.595 MAIT L2
ENSG00000185480 PARPBP -499936 sc-eQTL 9.20e-01 0.00888 0.0879 0.595 MAIT L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 2.14e-01 0.0965 0.0775 0.595 MAIT L2
ENSG00000075188 NUP37 -499871 sc-eQTL 3.93e-01 0.0845 0.0987 0.591 NK_CD56bright L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.57e-01 -0.101 0.0712 0.591 NK_CD56bright L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 6.47e-01 0.0379 0.0826 0.591 NK_CD56bright L2
ENSG00000120800 UTP20 340144 sc-eQTL 5.80e-02 0.182 0.0957 0.591 NK_CD56bright L2
ENSG00000120805 ARL1 212477 sc-eQTL 7.23e-01 -0.0334 0.0943 0.591 NK_CD56bright L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 2.34e-01 -0.101 0.085 0.591 NK_CD56bright L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.05e-01 0.145 0.0891 0.591 NK_CD56bright L2
ENSG00000185480 PARPBP -499936 sc-eQTL 4.26e-01 -0.0754 0.0946 0.591 NK_CD56bright L2
ENSG00000075188 NUP37 -499871 sc-eQTL 5.96e-01 0.0459 0.0865 0.595 NK_CD56dim L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.93e-02 -0.197 0.0835 0.595 NK_CD56dim L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 2.29e-01 -0.0768 0.0637 0.595 NK_CD56dim L2
ENSG00000120800 UTP20 340144 sc-eQTL 6.83e-01 -0.0362 0.0888 0.595 NK_CD56dim L2
ENSG00000120805 ARL1 212477 sc-eQTL 4.47e-01 -0.0654 0.0858 0.595 NK_CD56dim L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 8.24e-01 0.0164 0.0736 0.595 NK_CD56dim L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 2.41e-01 0.105 0.089 0.595 NK_CD56dim L2
ENSG00000185480 PARPBP -499936 sc-eQTL 4.71e-02 0.199 0.0996 0.595 NK_CD56dim L2
ENSG00000075188 NUP37 -499871 sc-eQTL 5.97e-01 -0.0469 0.0886 0.591 NK_HLA L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 5.88e-01 -0.0494 0.0909 0.591 NK_HLA L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.84e-01 0.0107 0.0731 0.591 NK_HLA L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.60e-01 0.00482 0.0956 0.591 NK_HLA L2
ENSG00000120805 ARL1 212477 sc-eQTL 7.67e-01 0.029 0.0976 0.591 NK_HLA L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 5.22e-01 -0.0581 0.0906 0.591 NK_HLA L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.97e-01 0.0494 0.0931 0.591 NK_HLA L2
ENSG00000185480 PARPBP -499936 sc-eQTL 4.54e-01 0.0686 0.0915 0.591 NK_HLA L2
ENSG00000075188 NUP37 -499871 sc-eQTL 9.47e-01 -0.00582 0.0874 0.595 NK_cytokine L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.92e-02 -0.19 0.0807 0.595 NK_cytokine L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 3.95e-01 -0.0529 0.062 0.595 NK_cytokine L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.63e-02 0.144 0.086 0.595 NK_cytokine L2
ENSG00000120805 ARL1 212477 sc-eQTL 6.78e-02 0.159 0.0864 0.595 NK_cytokine L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 3.46e-01 -0.0646 0.0685 0.595 NK_cytokine L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 8.04e-01 0.0222 0.0894 0.595 NK_cytokine L2
ENSG00000185480 PARPBP -499936 sc-eQTL 4.92e-01 -0.0664 0.0964 0.595 NK_cytokine L2
ENSG00000017427 IGF1 -861495 sc-eQTL 3.99e-01 0.0611 0.0722 0.581 PB L2
ENSG00000075188 NUP37 -499871 sc-eQTL 7.61e-01 -0.0297 0.0975 0.581 PB L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 6.51e-01 0.0342 0.0755 0.581 PB L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 4.02e-01 0.0912 0.108 0.581 PB L2
ENSG00000120800 UTP20 340144 sc-eQTL 3.80e-01 0.11 0.124 0.581 PB L2
ENSG00000120805 ARL1 212477 sc-eQTL 2.27e-01 0.0926 0.0762 0.581 PB L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 5.09e-01 0.0585 0.0884 0.581 PB L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 7.33e-01 0.0307 0.0898 0.581 PB L2
ENSG00000139351 SYCP3 -119223 sc-eQTL 6.40e-01 -0.0489 0.104 0.581 PB L2
ENSG00000185480 PARPBP -499936 sc-eQTL 3.69e-01 -0.0859 0.0953 0.581 PB L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 6.11e-02 -0.165 0.0871 0.581 PB L2
ENSG00000017427 IGF1 -861495 sc-eQTL 5.40e-03 0.087 0.0309 0.598 Pro_T L2
ENSG00000075188 NUP37 -499871 sc-eQTL 8.80e-01 0.00963 0.0636 0.598 Pro_T L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 5.63e-01 -0.0488 0.0842 0.598 Pro_T L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.43e-01 0.0913 0.062 0.598 Pro_T L2
ENSG00000120800 UTP20 340144 sc-eQTL 9.79e-01 0.00233 0.0891 0.598 Pro_T L2
ENSG00000120805 ARL1 212477 sc-eQTL 3.46e-01 -0.0635 0.0672 0.598 Pro_T L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 3.93e-01 0.0625 0.0731 0.598 Pro_T L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 3.22e-01 -0.0622 0.0626 0.598 Pro_T L2
ENSG00000185480 PARPBP -499936 sc-eQTL 4.48e-01 0.0441 0.0581 0.598 Pro_T L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 8.54e-01 0.0117 0.0636 0.598 Pro_T L2
ENSG00000075188 NUP37 -499871 sc-eQTL 3.68e-01 -0.0814 0.0901 0.598 Treg L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.06e-01 -0.152 0.0934 0.598 Treg L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.57e-01 -0.0148 0.0821 0.598 Treg L2
ENSG00000120800 UTP20 340144 sc-eQTL 8.82e-01 0.0133 0.0894 0.598 Treg L2
ENSG00000120805 ARL1 212477 sc-eQTL 9.88e-01 -0.0014 0.0924 0.598 Treg L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.62e-01 -0.0036 0.0751 0.598 Treg L2
ENSG00000075188 NUP37 -499871 sc-eQTL 9.08e-01 0.0101 0.0874 0.605 cDC L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.73e-01 -0.116 0.0848 0.605 cDC L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 9.57e-01 0.00589 0.11 0.605 cDC L2
ENSG00000120800 UTP20 340144 sc-eQTL 4.05e-01 0.0831 0.0995 0.605 cDC L2
ENSG00000120805 ARL1 212477 sc-eQTL 4.36e-01 -0.0806 0.103 0.605 cDC L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 5.17e-01 -0.063 0.0969 0.605 cDC L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 2.69e-01 -0.0835 0.0754 0.605 cDC L2
ENSG00000185480 PARPBP -499936 sc-eQTL 6.25e-01 0.0422 0.0862 0.605 cDC L2
ENSG00000075188 NUP37 -499871 sc-eQTL 4.72e-01 0.0578 0.0802 0.598 cMono_IL1B L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 7.18e-01 -0.0219 0.0605 0.598 cMono_IL1B L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.19e-01 -0.0184 0.0803 0.598 cMono_IL1B L2
ENSG00000120800 UTP20 340144 sc-eQTL 1.02e-01 0.148 0.0898 0.598 cMono_IL1B L2
ENSG00000120805 ARL1 212477 sc-eQTL 6.30e-01 0.0391 0.0809 0.598 cMono_IL1B L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 7.34e-01 -0.0238 0.0698 0.598 cMono_IL1B L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.19e-02 -0.115 0.059 0.598 cMono_IL1B L2
ENSG00000075188 NUP37 -499871 sc-eQTL 5.02e-01 0.0581 0.0863 0.598 cMono_S100A L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.19e-01 -0.0815 0.066 0.598 cMono_S100A L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.04e-01 -0.02 0.0806 0.598 cMono_S100A L2
ENSG00000120800 UTP20 340144 sc-eQTL 1.90e-01 0.124 0.094 0.598 cMono_S100A L2
ENSG00000120805 ARL1 212477 sc-eQTL 6.28e-01 0.043 0.0887 0.598 cMono_S100A L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 8.05e-01 0.0203 0.082 0.598 cMono_S100A L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.86e-01 -0.0349 0.0639 0.598 cMono_S100A L2
ENSG00000075188 NUP37 -499871 sc-eQTL 3.90e-01 0.0975 0.113 0.6 gdT L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 4.97e-03 -0.295 0.103 0.6 gdT L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 3.49e-01 0.0749 0.0797 0.6 gdT L2
ENSG00000120800 UTP20 340144 sc-eQTL 3.14e-01 -0.106 0.105 0.6 gdT L2
ENSG00000120805 ARL1 212477 sc-eQTL 4.80e-02 0.218 0.109 0.6 gdT L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.51e-01 -0.00642 0.103 0.6 gdT L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.38e-01 -0.155 0.104 0.6 gdT L2
ENSG00000185480 PARPBP -499936 sc-eQTL 5.19e-03 0.285 0.1 0.6 gdT L2
ENSG00000281344 HELLPAR -577336 sc-eQTL 5.73e-01 -0.0532 0.0943 0.6 gdT L2
ENSG00000075188 NUP37 -499871 sc-eQTL 5.30e-01 0.0561 0.0892 0.6 intMono L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 6.23e-01 -0.0402 0.0816 0.6 intMono L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 2.61e-01 -0.108 0.0956 0.6 intMono L2
ENSG00000120800 UTP20 340144 sc-eQTL 3.53e-02 0.188 0.0888 0.6 intMono L2
ENSG00000120805 ARL1 212477 sc-eQTL 6.02e-01 -0.0485 0.0929 0.6 intMono L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 8.76e-01 -0.014 0.0898 0.6 intMono L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 9.94e-01 0.00063 0.0785 0.6 intMono L2
ENSG00000075188 NUP37 -499871 sc-eQTL 5.35e-01 -0.0552 0.0889 0.595 ncMono L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 9.73e-01 0.00281 0.0821 0.595 ncMono L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.46e-01 0.0191 0.0984 0.595 ncMono L2
ENSG00000120800 UTP20 340144 sc-eQTL 2.11e-02 0.197 0.0848 0.595 ncMono L2
ENSG00000120805 ARL1 212477 sc-eQTL 1.07e-01 0.133 0.0821 0.595 ncMono L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 6.49e-01 0.0362 0.0794 0.595 ncMono L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 6.50e-01 0.0337 0.074 0.595 ncMono L2
ENSG00000075188 NUP37 -499871 sc-eQTL 1.11e-01 -0.174 0.109 0.596 pDC L2
ENSG00000111666 CHPT1 -76698 sc-eQTL 5.50e-01 -0.0572 0.0954 0.596 pDC L2
ENSG00000111670 GNPTAB -210710 sc-eQTL 2.68e-01 0.112 0.101 0.596 pDC L2
ENSG00000120800 UTP20 340144 sc-eQTL 7.90e-01 -0.0268 0.101 0.596 pDC L2
ENSG00000120805 ARL1 212477 sc-eQTL 3.02e-01 -0.109 0.106 0.596 pDC L2
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.87e-01 0.00149 0.0924 0.596 pDC L2
ENSG00000136048 DRAM1 -257331 sc-eQTL 9.39e-01 -0.00548 0.0714 0.596 pDC L2
ENSG00000185480 PARPBP -499936 sc-eQTL 9.50e-01 -0.00593 0.0948 0.596 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -861495 sc-eQTL 9.89e-01 0.000589 0.0438 0.598 B_Memory LOneK1K
ENSG00000075188 NUP37 -499871 sc-eQTL 9.56e-01 0.00481 0.088 0.598 B_Memory LOneK1K
ENSG00000111666 CHPT1 -76698 sc-eQTL 5.60e-02 -0.0882 0.0459 0.598 B_Memory LOneK1K
ENSG00000111670 GNPTAB -210710 sc-eQTL 3.43e-01 0.069 0.0726 0.598 B_Memory LOneK1K
ENSG00000120800 UTP20 340144 sc-eQTL 5.64e-01 -0.0433 0.0749 0.598 B_Memory LOneK1K
ENSG00000120805 ARL1 212477 sc-eQTL 9.69e-01 -0.00335 0.0847 0.598 B_Memory LOneK1K
ENSG00000120860 WASHC3 -441900 sc-eQTL 9.94e-01 -0.000474 0.0633 0.598 B_Memory LOneK1K
ENSG00000136048 DRAM1 -257331 sc-eQTL 1.51e-01 0.109 0.0754 0.598 B_Memory LOneK1K
ENSG00000139351 SYCP3 -119223 sc-eQTL 1.09e-01 -0.14 0.0868 0.598 B_Memory LOneK1K
ENSG00000185480 PARPBP -499936 sc-eQTL 2.06e-01 0.115 0.0911 0.598 B_Memory LOneK1K
ENSG00000281344 HELLPAR -577336 sc-eQTL 3.55e-01 0.0839 0.0904 0.598 B_Memory LOneK1K
ENSG00000017427 IGF1 -861495 sc-eQTL 7.39e-01 -0.0172 0.0516 0.598 B_Naive LOneK1K
ENSG00000075188 NUP37 -499871 sc-eQTL 9.30e-01 0.00738 0.0845 0.598 B_Naive LOneK1K
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.89e-01 0.0547 0.0415 0.598 B_Naive LOneK1K
ENSG00000111670 GNPTAB -210710 sc-eQTL 1.61e-01 0.0835 0.0595 0.598 B_Naive LOneK1K
ENSG00000120800 UTP20 340144 sc-eQTL 1.56e-01 -0.104 0.0728 0.598 B_Naive LOneK1K
ENSG00000120805 ARL1 212477 sc-eQTL 1.96e-01 -0.108 0.0831 0.598 B_Naive LOneK1K
ENSG00000120860 WASHC3 -441900 sc-eQTL 7.85e-01 -0.0171 0.0625 0.598 B_Naive LOneK1K
ENSG00000136048 DRAM1 -257331 sc-eQTL 3.82e-01 0.0573 0.0654 0.598 B_Naive LOneK1K
ENSG00000139351 SYCP3 -119223 sc-eQTL 9.53e-01 0.00556 0.0945 0.598 B_Naive LOneK1K
ENSG00000185480 PARPBP -499936 sc-eQTL 6.34e-01 0.0459 0.0962 0.598 B_Naive LOneK1K
ENSG00000281344 HELLPAR -577336 sc-eQTL 3.94e-01 -0.0747 0.0875 0.598 B_Naive LOneK1K
ENSG00000075188 NUP37 -499871 sc-eQTL 2.17e-01 0.0905 0.073 0.598 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -76698 sc-eQTL 2.60e-01 -0.0668 0.0591 0.598 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.46e-01 -0.0461 0.0762 0.598 CD14_Mono LOneK1K
ENSG00000120800 UTP20 340144 sc-eQTL 2.46e-02 0.202 0.0891 0.598 CD14_Mono LOneK1K
ENSG00000120805 ARL1 212477 sc-eQTL 4.13e-01 0.0632 0.077 0.598 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -441900 sc-eQTL 5.61e-01 -0.039 0.0671 0.598 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -257331 sc-eQTL 9.03e-02 -0.0931 0.0547 0.598 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -499871 sc-eQTL 9.98e-01 0.000222 0.0849 0.597 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -76698 sc-eQTL 4.94e-01 -0.0508 0.0741 0.597 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -210710 sc-eQTL 8.77e-01 -0.014 0.0898 0.597 CD16_Mono LOneK1K
ENSG00000120800 UTP20 340144 sc-eQTL 3.65e-03 0.249 0.0846 0.597 CD16_Mono LOneK1K
ENSG00000120805 ARL1 212477 sc-eQTL 7.35e-01 0.0291 0.0858 0.597 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -441900 sc-eQTL 7.46e-01 0.0242 0.0745 0.597 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -257331 sc-eQTL 5.93e-01 0.0344 0.0642 0.597 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -499871 sc-eQTL 8.64e-01 0.0143 0.0832 0.595 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -76698 sc-eQTL 1.29e-02 -0.201 0.08 0.595 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -210710 sc-eQTL 5.79e-02 -0.105 0.0551 0.595 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 340144 sc-eQTL 2.14e-01 0.106 0.085 0.595 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 212477 sc-eQTL 4.65e-01 0.0579 0.0791 0.595 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -441900 sc-eQTL 4.54e-01 -0.0481 0.064 0.595 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -257331 sc-eQTL 6.18e-02 0.16 0.0854 0.595 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -499936 sc-eQTL 1.27e-01 0.154 0.101 0.595 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -76698 eQTL 1.32e-10 -0.154 0.0236 0.0 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -76698 1.05e-05 1.13e-05 1.51e-06 6.3e-06 2.18e-06 4.24e-06 1.12e-05 1.49e-06 9.1e-06 5.14e-06 1.31e-05 5.76e-06 1.53e-05 3.61e-06 2.83e-06 6.27e-06 5.55e-06 8.03e-06 2.66e-06 2.91e-06 6.01e-06 9.34e-06 9.05e-06 3.27e-06 1.66e-05 3.61e-06 4.84e-06 3.99e-06 1.12e-05 1.06e-05 5.45e-06 9.55e-07 1.13e-06 3e-06 4.14e-06 2.62e-06 1.86e-06 1.82e-06 2.11e-06 9.68e-07 1.04e-06 1.33e-05 1.57e-06 1.64e-07 6.99e-07 1.67e-06 1.82e-06 7.02e-07 4.52e-07
ENSG00000258230 \N -153506 5.92e-06 6.63e-06 7.59e-07 3.6e-06 1.62e-06 1.53e-06 7.26e-06 9.96e-07 4.94e-06 3.06e-06 7.42e-06 2.93e-06 8.92e-06 2.32e-06 1.04e-06 3.97e-06 2.96e-06 3.81e-06 1.47e-06 1.39e-06 2.66e-06 5.15e-06 4.84e-06 1.99e-06 9e-06 2.01e-06 2.55e-06 1.78e-06 5.66e-06 6.66e-06 2.71e-06 4.18e-07 6.95e-07 1.74e-06 2.03e-06 1.25e-06 1.07e-06 4.66e-07 9.34e-07 6.99e-07 5.68e-07 7.99e-06 8.6e-07 1.78e-07 5.95e-07 1.16e-06 9.77e-07 6.58e-07 4.53e-07