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Genes within 1Mb (chr12:101610587:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -871157 sc-eQTL 9.10e-01 0.00446 0.0395 0.688 B L1
ENSG00000075188 NUP37 -509533 sc-eQTL 8.67e-01 -0.0115 0.0687 0.688 B L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 2.37e-02 0.094 0.0413 0.688 B L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 3.44e-01 0.0572 0.0603 0.688 B L1
ENSG00000120800 UTP20 330482 sc-eQTL 5.59e-01 -0.0401 0.0686 0.688 B L1
ENSG00000120805 ARL1 202815 sc-eQTL 7.18e-01 0.0213 0.059 0.688 B L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 5.27e-01 -0.0299 0.0472 0.688 B L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.42e-01 0.0786 0.0533 0.688 B L1
ENSG00000139351 SYCP3 -128885 sc-eQTL 6.55e-01 -0.0381 0.0851 0.688 B L1
ENSG00000185480 PARPBP -509598 sc-eQTL 9.50e-01 0.00515 0.0816 0.688 B L1
ENSG00000281344 HELLPAR -586998 sc-eQTL 9.89e-01 -0.00101 0.0761 0.688 B L1
ENSG00000075188 NUP37 -509533 sc-eQTL 2.22e-01 -0.076 0.062 0.688 CD4T L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.98e-01 -0.0215 0.084 0.688 CD4T L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 2.02e-02 0.135 0.0575 0.688 CD4T L1
ENSG00000120800 UTP20 330482 sc-eQTL 8.63e-01 -0.0111 0.0644 0.688 CD4T L1
ENSG00000120805 ARL1 202815 sc-eQTL 7.29e-01 -0.0219 0.063 0.688 CD4T L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 4.21e-01 -0.0355 0.044 0.688 CD4T L1
ENSG00000075188 NUP37 -509533 sc-eQTL 7.72e-01 0.0225 0.0777 0.688 CD8T L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.04e-01 0.0209 0.0842 0.688 CD8T L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 9.95e-01 -0.000345 0.0553 0.688 CD8T L1
ENSG00000120800 UTP20 330482 sc-eQTL 4.95e-01 -0.0477 0.0697 0.688 CD8T L1
ENSG00000120805 ARL1 202815 sc-eQTL 9.20e-01 0.0077 0.077 0.688 CD8T L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.87e-01 -0.000871 0.0547 0.688 CD8T L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 9.87e-01 0.00126 0.0784 0.688 CD8T L1
ENSG00000075188 NUP37 -509533 sc-eQTL 6.56e-02 -0.161 0.0868 0.687 DC L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 3.15e-01 -0.0805 0.0799 0.687 DC L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 7.65e-01 -0.0264 0.0881 0.687 DC L1
ENSG00000120800 UTP20 330482 sc-eQTL 8.87e-01 0.0135 0.0944 0.687 DC L1
ENSG00000120805 ARL1 202815 sc-eQTL 5.04e-01 -0.0653 0.0975 0.687 DC L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.79e-01 0.0349 0.084 0.687 DC L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 2.68e-01 -0.0768 0.0692 0.687 DC L1
ENSG00000185480 PARPBP -509598 sc-eQTL 1.32e-01 0.137 0.091 0.687 DC L1
ENSG00000075188 NUP37 -509533 sc-eQTL 7.66e-01 -0.0215 0.072 0.688 Mono L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 6.30e-01 -0.0294 0.061 0.688 Mono L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 5.84e-01 0.0419 0.0764 0.688 Mono L1
ENSG00000120800 UTP20 330482 sc-eQTL 1.92e-01 0.111 0.085 0.688 Mono L1
ENSG00000120805 ARL1 202815 sc-eQTL 6.47e-01 0.036 0.0785 0.688 Mono L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 2.72e-01 -0.0758 0.0689 0.688 Mono L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 5.51e-01 -0.0336 0.0563 0.688 Mono L1
ENSG00000075188 NUP37 -509533 sc-eQTL 1.95e-01 -0.104 0.0797 0.687 NK L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 1.78e-01 -0.1 0.074 0.687 NK L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 1.54e-01 -0.0767 0.0536 0.687 NK L1
ENSG00000120800 UTP20 330482 sc-eQTL 2.00e-01 0.111 0.0863 0.687 NK L1
ENSG00000120805 ARL1 202815 sc-eQTL 5.18e-01 0.0515 0.0796 0.687 NK L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.01e-01 -0.0151 0.06 0.687 NK L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.03e-01 0.139 0.0849 0.687 NK L1
ENSG00000185480 PARPBP -509598 sc-eQTL 9.81e-01 0.00236 0.1 0.687 NK L1
ENSG00000017427 IGF1 -871157 sc-eQTL 1.89e-01 0.039 0.0296 0.688 Other_T L1
ENSG00000075188 NUP37 -509533 sc-eQTL 3.87e-01 -0.049 0.0565 0.688 Other_T L1
ENSG00000111666 CHPT1 -86360 sc-eQTL 9.34e-01 -0.00687 0.0827 0.688 Other_T L1
ENSG00000111670 GNPTAB -220372 sc-eQTL 5.75e-02 0.113 0.0592 0.688 Other_T L1
ENSG00000120800 UTP20 330482 sc-eQTL 7.84e-01 0.0255 0.0932 0.688 Other_T L1
ENSG00000120805 ARL1 202815 sc-eQTL 8.16e-01 0.0159 0.0679 0.688 Other_T L1
ENSG00000120860 WASHC3 -451562 sc-eQTL 7.85e-01 -0.0165 0.0604 0.688 Other_T L1
ENSG00000136048 DRAM1 -266993 sc-eQTL 4.96e-01 0.0493 0.0723 0.688 Other_T L1
ENSG00000185480 PARPBP -509598 sc-eQTL 4.85e-01 -0.0422 0.0603 0.688 Other_T L1
ENSG00000281344 HELLPAR -586998 sc-eQTL 8.75e-01 0.0111 0.0702 0.688 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -871157 sc-eQTL 9.95e-01 0.000129 0.0193 0.689 B_Activated L2
ENSG00000075188 NUP37 -509533 sc-eQTL 6.11e-01 0.0509 0.1 0.689 B_Activated L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.65e-01 -0.0222 0.074 0.689 B_Activated L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.30e-01 0.0831 0.105 0.689 B_Activated L2
ENSG00000120800 UTP20 330482 sc-eQTL 4.17e-01 -0.0825 0.102 0.689 B_Activated L2
ENSG00000120805 ARL1 202815 sc-eQTL 3.23e-01 -0.104 0.105 0.689 B_Activated L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.17e-01 -0.0232 0.1 0.689 B_Activated L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 2.32e-02 0.227 0.099 0.689 B_Activated L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 2.78e-01 0.0896 0.0823 0.689 B_Activated L2
ENSG00000185480 PARPBP -509598 sc-eQTL 3.79e-01 -0.0731 0.0829 0.689 B_Activated L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 9.05e-01 0.00932 0.0781 0.689 B_Activated L2
ENSG00000017427 IGF1 -871157 sc-eQTL 5.04e-01 0.0261 0.039 0.687 B_Intermediate L2
ENSG00000075188 NUP37 -509533 sc-eQTL 8.87e-01 0.0138 0.0972 0.687 B_Intermediate L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 3.33e-01 0.0505 0.052 0.687 B_Intermediate L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.62e-01 0.0337 0.0771 0.687 B_Intermediate L2
ENSG00000120800 UTP20 330482 sc-eQTL 6.83e-01 0.035 0.0856 0.687 B_Intermediate L2
ENSG00000120805 ARL1 202815 sc-eQTL 1.66e-01 0.133 0.096 0.687 B_Intermediate L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 3.43e-01 0.0755 0.0795 0.687 B_Intermediate L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 2.76e-01 0.093 0.0852 0.687 B_Intermediate L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 9.88e-01 0.0014 0.0899 0.687 B_Intermediate L2
ENSG00000185480 PARPBP -509598 sc-eQTL 7.32e-01 0.0323 0.0943 0.687 B_Intermediate L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 7.43e-01 0.0297 0.0904 0.687 B_Intermediate L2
ENSG00000017427 IGF1 -871157 sc-eQTL 9.74e-01 -0.00115 0.0359 0.688 B_Memory L2
ENSG00000075188 NUP37 -509533 sc-eQTL 9.42e-01 0.00695 0.0948 0.688 B_Memory L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 1.74e-01 -0.0841 0.0616 0.688 B_Memory L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.66e-01 0.0619 0.0847 0.688 B_Memory L2
ENSG00000120800 UTP20 330482 sc-eQTL 9.19e-01 -0.00944 0.0931 0.688 B_Memory L2
ENSG00000120805 ARL1 202815 sc-eQTL 2.63e-01 0.103 0.0922 0.688 B_Memory L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.17e-01 -0.0192 0.0828 0.688 B_Memory L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 6.89e-01 0.0348 0.0868 0.688 B_Memory L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 3.19e-01 0.0891 0.0891 0.688 B_Memory L2
ENSG00000185480 PARPBP -509598 sc-eQTL 4.44e-01 0.0701 0.0913 0.688 B_Memory L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 2.51e-01 0.0954 0.0829 0.688 B_Memory L2
ENSG00000017427 IGF1 -871157 sc-eQTL 7.07e-01 -0.0187 0.0496 0.688 B_Naive1 L2
ENSG00000075188 NUP37 -509533 sc-eQTL 8.45e-01 -0.0176 0.0898 0.688 B_Naive1 L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 6.24e-03 0.127 0.0459 0.688 B_Naive1 L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.31e-01 0.0317 0.066 0.688 B_Naive1 L2
ENSG00000120800 UTP20 330482 sc-eQTL 9.18e-01 0.00805 0.0784 0.688 B_Naive1 L2
ENSG00000120805 ARL1 202815 sc-eQTL 3.38e-01 -0.0838 0.0873 0.688 B_Naive1 L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.37e-01 -0.0136 0.0662 0.688 B_Naive1 L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 2.18e-01 0.0885 0.0715 0.688 B_Naive1 L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 9.32e-01 -0.00834 0.0975 0.688 B_Naive1 L2
ENSG00000185480 PARPBP -509598 sc-eQTL 5.90e-01 0.0513 0.0949 0.688 B_Naive1 L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 2.13e-01 -0.111 0.0886 0.688 B_Naive1 L2
ENSG00000017427 IGF1 -871157 sc-eQTL 9.75e-02 -0.0725 0.0435 0.687 B_Naive2 L2
ENSG00000075188 NUP37 -509533 sc-eQTL 9.36e-01 0.00717 0.0898 0.687 B_Naive2 L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.20e-04 0.159 0.0468 0.687 B_Naive2 L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 7.63e-01 0.0225 0.0745 0.687 B_Naive2 L2
ENSG00000120800 UTP20 330482 sc-eQTL 1.13e-01 -0.137 0.0859 0.687 B_Naive2 L2
ENSG00000120805 ARL1 202815 sc-eQTL 5.79e-01 -0.0527 0.0948 0.687 B_Naive2 L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.68e-01 -0.0355 0.0826 0.687 B_Naive2 L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 5.90e-01 0.0442 0.0818 0.687 B_Naive2 L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 2.29e-01 -0.104 0.0858 0.687 B_Naive2 L2
ENSG00000185480 PARPBP -509598 sc-eQTL 6.52e-01 -0.0448 0.0993 0.687 B_Naive2 L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 4.72e-01 0.0616 0.0855 0.687 B_Naive2 L2
ENSG00000075188 NUP37 -509533 sc-eQTL 5.78e-01 -0.0529 0.0948 0.686 CD4_CTL L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.55e-01 -0.0297 0.095 0.686 CD4_CTL L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 2.88e-01 0.0882 0.0828 0.686 CD4_CTL L2
ENSG00000120800 UTP20 330482 sc-eQTL 2.00e-01 -0.117 0.091 0.686 CD4_CTL L2
ENSG00000120805 ARL1 202815 sc-eQTL 9.55e-01 0.00547 0.0968 0.686 CD4_CTL L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 5.55e-02 0.177 0.092 0.686 CD4_CTL L2
ENSG00000075188 NUP37 -509533 sc-eQTL 2.86e-01 -0.0759 0.0709 0.688 CD4_Naive L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 9.63e-01 -0.00376 0.082 0.688 CD4_Naive L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 1.17e-02 0.158 0.0622 0.688 CD4_Naive L2
ENSG00000120800 UTP20 330482 sc-eQTL 5.97e-01 0.0364 0.0688 0.688 CD4_Naive L2
ENSG00000120805 ARL1 202815 sc-eQTL 4.55e-01 -0.0558 0.0745 0.688 CD4_Naive L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 2.80e-01 -0.0562 0.052 0.688 CD4_Naive L2
ENSG00000075188 NUP37 -509533 sc-eQTL 2.05e-01 -0.0959 0.0755 0.688 CD4_TCM L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.13e-01 -0.0207 0.0874 0.688 CD4_TCM L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 9.87e-01 0.00107 0.0677 0.688 CD4_TCM L2
ENSG00000120800 UTP20 330482 sc-eQTL 8.06e-01 -0.0208 0.0847 0.688 CD4_TCM L2
ENSG00000120805 ARL1 202815 sc-eQTL 2.12e-01 0.0989 0.079 0.688 CD4_TCM L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.21e-01 0.0258 0.052 0.688 CD4_TCM L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.04e-01 0.0337 0.0888 0.688 CD4_TEM L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 2.52e-01 -0.0978 0.0852 0.688 CD4_TEM L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.53e-01 0.0619 0.0822 0.688 CD4_TEM L2
ENSG00000120800 UTP20 330482 sc-eQTL 3.50e-01 0.0832 0.0889 0.688 CD4_TEM L2
ENSG00000120805 ARL1 202815 sc-eQTL 9.16e-01 0.00889 0.0841 0.688 CD4_TEM L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.55e-01 0.0138 0.0754 0.688 CD4_TEM L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.33e-01 -0.028 0.082 0.688 CD8_CTL L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.59e-01 -0.0258 0.0841 0.688 CD8_CTL L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.04e-01 -0.0562 0.0671 0.688 CD8_CTL L2
ENSG00000120800 UTP20 330482 sc-eQTL 2.82e-01 -0.0978 0.0907 0.688 CD8_CTL L2
ENSG00000120805 ARL1 202815 sc-eQTL 9.31e-01 -0.0078 0.0899 0.688 CD8_CTL L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.26e-01 -0.00716 0.0767 0.688 CD8_CTL L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 5.64e-01 -0.0552 0.0954 0.688 CD8_CTL L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.50e-01 0.0276 0.0864 0.688 CD8_Naive L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 9.53e-01 -0.00503 0.0859 0.688 CD8_Naive L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 1.86e-01 0.102 0.0768 0.688 CD8_Naive L2
ENSG00000120800 UTP20 330482 sc-eQTL 5.70e-01 -0.0466 0.082 0.688 CD8_Naive L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.12e-01 0.0212 0.0891 0.688 CD8_Naive L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.75e-01 0.0247 0.0586 0.688 CD8_Naive L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 5.76e-01 -0.0506 0.0905 0.688 CD8_Naive L2
ENSG00000075188 NUP37 -509533 sc-eQTL 8.99e-01 0.0119 0.094 0.688 CD8_TCM L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.61e-01 0.0147 0.0843 0.688 CD8_TCM L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 8.73e-01 -0.014 0.0872 0.688 CD8_TCM L2
ENSG00000120800 UTP20 330482 sc-eQTL 1.65e-01 -0.132 0.0947 0.688 CD8_TCM L2
ENSG00000120805 ARL1 202815 sc-eQTL 7.18e-01 0.0338 0.0934 0.688 CD8_TCM L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 2.39e-01 -0.0986 0.0834 0.688 CD8_TCM L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 6.90e-01 0.0364 0.0912 0.688 CD8_TCM L2
ENSG00000075188 NUP37 -509533 sc-eQTL 5.62e-01 0.054 0.093 0.685 CD8_TEM L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.38e-01 -0.018 0.088 0.685 CD8_TEM L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.99e-03 0.252 0.0925 0.685 CD8_TEM L2
ENSG00000120800 UTP20 330482 sc-eQTL 3.13e-01 -0.102 0.101 0.685 CD8_TEM L2
ENSG00000120805 ARL1 202815 sc-eQTL 5.86e-01 0.0528 0.0966 0.685 CD8_TEM L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 1.28e-02 -0.209 0.0832 0.685 CD8_TEM L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 8.30e-01 -0.02 0.0932 0.685 CD8_TEM L2
ENSG00000017427 IGF1 -871157 sc-eQTL 6.25e-01 0.016 0.0327 0.686 MAIT L2
ENSG00000075188 NUP37 -509533 sc-eQTL 9.17e-02 -0.155 0.0912 0.686 MAIT L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 4.14e-01 0.0732 0.0894 0.686 MAIT L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.60e-01 0.0586 0.0792 0.686 MAIT L2
ENSG00000120800 UTP20 330482 sc-eQTL 4.54e-01 -0.0712 0.095 0.686 MAIT L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.30e-01 0.0208 0.097 0.686 MAIT L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 7.11e-01 -0.0299 0.0806 0.686 MAIT L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 9.84e-01 0.00186 0.0915 0.686 MAIT L2
ENSG00000185480 PARPBP -509598 sc-eQTL 2.63e-01 0.1 0.0894 0.686 MAIT L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 7.84e-01 0.0218 0.0794 0.686 MAIT L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.49e-01 -0.0322 0.1 0.682 NK_CD56bright L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 9.42e-01 0.00528 0.0727 0.682 NK_CD56bright L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 7.25e-01 -0.0295 0.084 0.682 NK_CD56bright L2
ENSG00000120800 UTP20 330482 sc-eQTL 3.46e-01 0.0925 0.0978 0.682 NK_CD56bright L2
ENSG00000120805 ARL1 202815 sc-eQTL 7.18e-01 -0.0347 0.0958 0.682 NK_CD56bright L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 1.57e-01 -0.122 0.0862 0.682 NK_CD56bright L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 9.18e-03 0.236 0.0896 0.682 NK_CD56bright L2
ENSG00000185480 PARPBP -509598 sc-eQTL 4.00e-01 -0.0809 0.096 0.682 NK_CD56bright L2
ENSG00000075188 NUP37 -509533 sc-eQTL 2.15e-01 -0.109 0.0877 0.685 NK_CD56dim L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 1.40e-01 -0.127 0.0855 0.685 NK_CD56dim L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 3.85e-01 -0.0565 0.0649 0.685 NK_CD56dim L2
ENSG00000120800 UTP20 330482 sc-eQTL 6.75e-01 -0.0379 0.0902 0.685 NK_CD56dim L2
ENSG00000120805 ARL1 202815 sc-eQTL 2.55e-01 -0.0992 0.087 0.685 NK_CD56dim L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 5.70e-01 0.0425 0.0747 0.685 NK_CD56dim L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 4.87e-01 0.0631 0.0907 0.685 NK_CD56dim L2
ENSG00000185480 PARPBP -509598 sc-eQTL 1.68e-01 0.141 0.102 0.685 NK_CD56dim L2
ENSG00000075188 NUP37 -509533 sc-eQTL 6.19e-01 -0.0454 0.0911 0.685 NK_HLA L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.81e-01 -0.0261 0.0936 0.685 NK_HLA L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.28e-01 -0.0597 0.0751 0.685 NK_HLA L2
ENSG00000120800 UTP20 330482 sc-eQTL 6.26e-01 -0.048 0.0983 0.685 NK_HLA L2
ENSG00000120805 ARL1 202815 sc-eQTL 4.86e-01 0.0701 0.1 0.685 NK_HLA L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.66e-01 0.0157 0.0933 0.685 NK_HLA L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 4.93e-01 0.0657 0.0958 0.685 NK_HLA L2
ENSG00000185480 PARPBP -509598 sc-eQTL 6.31e-02 0.175 0.0935 0.685 NK_HLA L2
ENSG00000075188 NUP37 -509533 sc-eQTL 8.10e-01 0.0216 0.0898 0.685 NK_cytokine L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.09e-01 -0.0204 0.084 0.685 NK_cytokine L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 9.93e-01 -0.000541 0.0638 0.685 NK_cytokine L2
ENSG00000120800 UTP20 330482 sc-eQTL 3.27e-01 0.0871 0.0888 0.685 NK_cytokine L2
ENSG00000120805 ARL1 202815 sc-eQTL 1.10e-02 0.226 0.0882 0.685 NK_cytokine L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.87e-01 -0.00115 0.0705 0.685 NK_cytokine L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 8.76e-01 0.0143 0.0918 0.685 NK_cytokine L2
ENSG00000185480 PARPBP -509598 sc-eQTL 5.47e-02 -0.19 0.0983 0.685 NK_cytokine L2
ENSG00000017427 IGF1 -871157 sc-eQTL 1.19e-01 0.116 0.0742 0.681 PB L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.96e-01 -0.0261 0.101 0.681 PB L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 5.40e-01 0.048 0.0782 0.681 PB L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 8.02e-01 0.0282 0.113 0.681 PB L2
ENSG00000120800 UTP20 330482 sc-eQTL 9.57e-01 -0.00705 0.129 0.681 PB L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.67e-01 0.0133 0.0795 0.681 PB L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 2.05e-01 0.116 0.0911 0.681 PB L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 3.09e-01 0.0946 0.0926 0.681 PB L2
ENSG00000139351 SYCP3 -128885 sc-eQTL 7.18e-01 0.0391 0.108 0.681 PB L2
ENSG00000185480 PARPBP -509598 sc-eQTL 4.30e-01 -0.0782 0.0988 0.681 PB L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 1.15e-01 -0.144 0.0907 0.681 PB L2
ENSG00000017427 IGF1 -871157 sc-eQTL 3.25e-02 0.0699 0.0325 0.689 Pro_T L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.98e-01 0.017 0.0663 0.689 Pro_T L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 6.02e-01 0.0458 0.0878 0.689 Pro_T L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 2.20e-01 0.0796 0.0647 0.689 Pro_T L2
ENSG00000120800 UTP20 330482 sc-eQTL 2.22e-01 0.113 0.0925 0.689 Pro_T L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.32e-01 -0.0149 0.0702 0.689 Pro_T L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.47e-01 0.0349 0.0762 0.689 Pro_T L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 9.27e-01 -0.00602 0.0654 0.689 Pro_T L2
ENSG00000185480 PARPBP -509598 sc-eQTL 8.56e-01 -0.011 0.0606 0.689 Pro_T L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 6.97e-01 -0.0258 0.0663 0.689 Pro_T L2
ENSG00000075188 NUP37 -509533 sc-eQTL 4.53e-01 -0.0692 0.0919 0.688 Treg L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 2.90e-01 -0.101 0.0955 0.688 Treg L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 7.13e-01 -0.0308 0.0836 0.688 Treg L2
ENSG00000120800 UTP20 330482 sc-eQTL 5.38e-01 -0.0561 0.091 0.688 Treg L2
ENSG00000120805 ARL1 202815 sc-eQTL 4.41e-01 -0.0726 0.0941 0.688 Treg L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.79e-01 0.00203 0.0765 0.688 Treg L2
ENSG00000075188 NUP37 -509533 sc-eQTL 4.27e-01 -0.0684 0.0859 0.688 cDC L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 1.90e-01 -0.11 0.0835 0.688 cDC L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 5.28e-01 -0.0684 0.108 0.688 cDC L2
ENSG00000120800 UTP20 330482 sc-eQTL 4.82e-01 0.0691 0.098 0.688 cDC L2
ENSG00000120805 ARL1 202815 sc-eQTL 6.06e-01 0.0525 0.102 0.688 cDC L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 6.04e-01 -0.0496 0.0954 0.688 cDC L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.05e-01 -0.121 0.0739 0.688 cDC L2
ENSG00000185480 PARPBP -509598 sc-eQTL 2.72e-01 0.0932 0.0846 0.688 cDC L2
ENSG00000075188 NUP37 -509533 sc-eQTL 5.98e-01 0.0437 0.0829 0.688 cMono_IL1B L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 9.15e-01 -0.00665 0.0626 0.688 cMono_IL1B L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.71e-02 0.164 0.0822 0.688 cMono_IL1B L2
ENSG00000120800 UTP20 330482 sc-eQTL 5.10e-01 0.0615 0.0933 0.688 cMono_IL1B L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.14e-01 -0.0197 0.0836 0.688 cMono_IL1B L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.51e-01 0.00445 0.0721 0.688 cMono_IL1B L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.67e-01 -0.085 0.0612 0.688 cMono_IL1B L2
ENSG00000075188 NUP37 -509533 sc-eQTL 2.30e-01 -0.107 0.0888 0.688 cMono_S100A L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.18e-01 -0.0246 0.0683 0.688 cMono_S100A L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.94e-01 -0.0327 0.083 0.688 cMono_S100A L2
ENSG00000120800 UTP20 330482 sc-eQTL 7.22e-01 -0.0347 0.0973 0.688 cMono_S100A L2
ENSG00000120805 ARL1 202815 sc-eQTL 3.52e-01 0.0852 0.0912 0.688 cMono_S100A L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 3.34e-01 -0.0817 0.0843 0.688 cMono_S100A L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 9.70e-01 -0.00245 0.0659 0.688 cMono_S100A L2
ENSG00000075188 NUP37 -509533 sc-eQTL 7.62e-01 -0.0348 0.114 0.697 gdT L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 2.63e-02 -0.237 0.106 0.697 gdT L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 8.43e-01 0.016 0.0809 0.697 gdT L2
ENSG00000120800 UTP20 330482 sc-eQTL 8.99e-01 0.0136 0.107 0.697 gdT L2
ENSG00000120805 ARL1 202815 sc-eQTL 5.41e-01 0.0686 0.112 0.697 gdT L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 3.63e-01 0.095 0.104 0.697 gdT L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 7.33e-01 -0.0363 0.106 0.697 gdT L2
ENSG00000185480 PARPBP -509598 sc-eQTL 2.22e-01 0.127 0.104 0.697 gdT L2
ENSG00000281344 HELLPAR -586998 sc-eQTL 9.31e-01 0.00833 0.0955 0.697 gdT L2
ENSG00000075188 NUP37 -509533 sc-eQTL 2.46e-01 -0.107 0.0916 0.689 intMono L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 3.07e-01 -0.0858 0.0838 0.689 intMono L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 8.37e-01 -0.0203 0.0987 0.689 intMono L2
ENSG00000120800 UTP20 330482 sc-eQTL 2.41e-01 0.108 0.0921 0.689 intMono L2
ENSG00000120805 ARL1 202815 sc-eQTL 8.18e-01 0.0221 0.0956 0.689 intMono L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.24e-01 -0.00877 0.0924 0.689 intMono L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 2.77e-01 -0.0878 0.0805 0.689 intMono L2
ENSG00000075188 NUP37 -509533 sc-eQTL 9.90e-01 -0.00112 0.0903 0.688 ncMono L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 8.88e-01 -0.0117 0.0834 0.688 ncMono L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 7.60e-01 -0.0306 0.0998 0.688 ncMono L2
ENSG00000120800 UTP20 330482 sc-eQTL 1.62e-01 0.122 0.0869 0.688 ncMono L2
ENSG00000120805 ARL1 202815 sc-eQTL 5.01e-01 0.0565 0.0838 0.688 ncMono L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 8.76e-01 0.0126 0.0807 0.688 ncMono L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 3.88e-01 0.0648 0.075 0.688 ncMono L2
ENSG00000075188 NUP37 -509533 sc-eQTL 9.20e-02 -0.185 0.109 0.669 pDC L2
ENSG00000111666 CHPT1 -86360 sc-eQTL 6.37e-01 -0.0453 0.0958 0.669 pDC L2
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.23e-01 0.0499 0.101 0.669 pDC L2
ENSG00000120800 UTP20 330482 sc-eQTL 1.94e-01 -0.131 0.1 0.669 pDC L2
ENSG00000120805 ARL1 202815 sc-eQTL 2.66e-01 -0.118 0.106 0.669 pDC L2
ENSG00000120860 WASHC3 -451562 sc-eQTL 2.89e-01 0.0982 0.0923 0.669 pDC L2
ENSG00000136048 DRAM1 -266993 sc-eQTL 5.59e-01 -0.0419 0.0716 0.669 pDC L2
ENSG00000185480 PARPBP -509598 sc-eQTL 6.30e-01 0.0459 0.0951 0.669 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -871157 sc-eQTL 3.36e-01 0.0432 0.0448 0.688 B_Memory LOneK1K
ENSG00000075188 NUP37 -509533 sc-eQTL 8.05e-01 0.0222 0.0901 0.688 B_Memory LOneK1K
ENSG00000111666 CHPT1 -86360 sc-eQTL 7.93e-01 0.0124 0.0474 0.688 B_Memory LOneK1K
ENSG00000111670 GNPTAB -220372 sc-eQTL 4.72e-01 0.0536 0.0744 0.688 B_Memory LOneK1K
ENSG00000120800 UTP20 330482 sc-eQTL 9.73e-01 0.00256 0.0767 0.688 B_Memory LOneK1K
ENSG00000120805 ARL1 202815 sc-eQTL 3.02e-01 0.0896 0.0865 0.688 B_Memory LOneK1K
ENSG00000120860 WASHC3 -451562 sc-eQTL 5.46e-01 0.0391 0.0647 0.688 B_Memory LOneK1K
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.40e-01 0.114 0.0772 0.688 B_Memory LOneK1K
ENSG00000139351 SYCP3 -128885 sc-eQTL 9.42e-01 0.00654 0.0894 0.688 B_Memory LOneK1K
ENSG00000185480 PARPBP -509598 sc-eQTL 4.79e-01 0.0662 0.0935 0.688 B_Memory LOneK1K
ENSG00000281344 HELLPAR -586998 sc-eQTL 2.12e-01 0.116 0.0924 0.688 B_Memory LOneK1K
ENSG00000017427 IGF1 -871157 sc-eQTL 2.94e-01 -0.0555 0.0527 0.688 B_Naive LOneK1K
ENSG00000075188 NUP37 -509533 sc-eQTL 6.92e-01 -0.0344 0.0865 0.688 B_Naive LOneK1K
ENSG00000111666 CHPT1 -86360 sc-eQTL 3.94e-03 0.122 0.0419 0.688 B_Naive LOneK1K
ENSG00000111670 GNPTAB -220372 sc-eQTL 1.54e-01 0.0872 0.0609 0.688 B_Naive LOneK1K
ENSG00000120800 UTP20 330482 sc-eQTL 2.06e-01 -0.0946 0.0746 0.688 B_Naive LOneK1K
ENSG00000120805 ARL1 202815 sc-eQTL 6.22e-02 -0.159 0.0847 0.688 B_Naive LOneK1K
ENSG00000120860 WASHC3 -451562 sc-eQTL 7.10e-01 -0.0238 0.0639 0.688 B_Naive LOneK1K
ENSG00000136048 DRAM1 -266993 sc-eQTL 3.79e-01 0.0591 0.0669 0.688 B_Naive LOneK1K
ENSG00000139351 SYCP3 -128885 sc-eQTL 4.95e-01 -0.0661 0.0967 0.688 B_Naive LOneK1K
ENSG00000185480 PARPBP -509598 sc-eQTL 7.19e-01 0.0355 0.0985 0.688 B_Naive LOneK1K
ENSG00000281344 HELLPAR -586998 sc-eQTL 9.99e-01 -7.62e-05 0.0897 0.688 B_Naive LOneK1K
ENSG00000075188 NUP37 -509533 sc-eQTL 7.28e-01 0.0262 0.0754 0.688 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -86360 sc-eQTL 6.97e-01 -0.0238 0.0609 0.688 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -220372 sc-eQTL 5.06e-01 0.0522 0.0784 0.688 CD14_Mono LOneK1K
ENSG00000120800 UTP20 330482 sc-eQTL 3.90e-01 0.0798 0.0926 0.688 CD14_Mono LOneK1K
ENSG00000120805 ARL1 202815 sc-eQTL 5.37e-01 0.0491 0.0793 0.688 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -451562 sc-eQTL 1.58e-01 -0.0973 0.0687 0.688 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -266993 sc-eQTL 4.06e-01 -0.0471 0.0566 0.688 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -509533 sc-eQTL 6.42e-01 -0.0406 0.0872 0.688 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -86360 sc-eQTL 2.58e-01 -0.0861 0.0759 0.688 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -220372 sc-eQTL 6.53e-01 0.0416 0.0922 0.688 CD16_Mono LOneK1K
ENSG00000120800 UTP20 330482 sc-eQTL 5.10e-02 0.172 0.0879 0.688 CD16_Mono LOneK1K
ENSG00000120805 ARL1 202815 sc-eQTL 8.21e-01 0.0199 0.0881 0.688 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.95e-01 -0.000452 0.0765 0.688 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -266993 sc-eQTL 8.36e-01 0.0137 0.066 0.688 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -509533 sc-eQTL 3.78e-01 -0.0747 0.0846 0.685 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -86360 sc-eQTL 3.03e-01 -0.0851 0.0825 0.685 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -220372 sc-eQTL 9.92e-02 -0.0932 0.0562 0.685 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 330482 sc-eQTL 2.30e-01 0.104 0.0866 0.685 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 202815 sc-eQTL 5.24e-01 0.0514 0.0805 0.685 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -451562 sc-eQTL 9.58e-01 0.00346 0.0653 0.685 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -266993 sc-eQTL 1.12e-01 0.139 0.0872 0.685 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -509598 sc-eQTL 5.12e-01 0.0676 0.103 0.685 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -86360 eQTL 4.22e-10 -0.158 0.025 0.0 0.0 0.353
ENSG00000120800 UTP20 330482 eQTL 0.0493 -0.0227 0.0115 0.00107 0.0 0.353

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -86360 7.83e-06 9.37e-06 2.27e-06 6.13e-06 2.39e-06 4.24e-06 1.04e-05 2.46e-06 9.81e-06 5.42e-06 1.19e-05 5.73e-06 1.47e-05 3.7e-06 2.91e-06 6.67e-06 4.93e-06 7.55e-06 3.42e-06 3.27e-06 6.18e-06 1.02e-05 7.99e-06 3.78e-06 1.29e-05 4.3e-06 6.59e-06 4.51e-06 1.08e-05 7.9e-06 5.43e-06 1.03e-06 1.21e-06 4.03e-06 5.03e-06 2.87e-06 1.84e-06 1.99e-06 2.24e-06 1.74e-06 1.67e-06 1.08e-05 1.57e-06 3.6e-07 1.36e-06 1.72e-06 1.93e-06 8.57e-07 9.21e-07
ENSG00000258230 \N -163168 4.3e-06 4.77e-06 6.49e-07 3.08e-06 1.7e-06 1.53e-06 4.08e-06 1.25e-06 4.91e-06 2.73e-06 4.99e-06 3.28e-06 7.05e-06 2.37e-06 1.31e-06 3.81e-06 1.84e-06 3.57e-06 1.56e-06 1.61e-06 2.67e-06 5e-06 4.24e-06 1.99e-06 5.16e-06 2.23e-06 2.29e-06 1.77e-06 4.44e-06 3.94e-06 2.72e-06 5.84e-07 7.26e-07 2.39e-06 1.99e-06 1.38e-06 1.31e-06 5e-07 9.04e-07 7.31e-07 9.12e-07 4.81e-06 5.26e-07 1.64e-07 7.99e-07 1.2e-06 1.04e-06 6.91e-07 5.88e-07