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Genes within 1Mb (chr12:101572894:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -908850 sc-eQTL 2.32e-01 -0.0469 0.0391 0.318 B L1
ENSG00000075188 NUP37 -547226 sc-eQTL 8.29e-01 -0.0148 0.0683 0.318 B L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.59e-01 -0.00211 0.0415 0.318 B L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.29e-01 0.0476 0.06 0.318 B L1
ENSG00000120800 UTP20 292789 sc-eQTL 8.81e-01 0.0102 0.0683 0.318 B L1
ENSG00000120805 ARL1 165122 sc-eQTL 8.36e-01 0.0121 0.0587 0.318 B L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.78e-01 0.0415 0.0469 0.318 B L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.62e-01 0.0744 0.0531 0.318 B L1
ENSG00000139351 SYCP3 -166578 sc-eQTL 8.62e-02 0.145 0.0841 0.318 B L1
ENSG00000185480 PARPBP -547291 sc-eQTL 1.13e-01 0.128 0.0806 0.318 B L1
ENSG00000281344 HELLPAR -624691 sc-eQTL 6.97e-01 0.0295 0.0756 0.318 B L1
ENSG00000075188 NUP37 -547226 sc-eQTL 2.69e-01 -0.0684 0.0618 0.318 CD4T L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 2.40e-01 0.0982 0.0834 0.318 CD4T L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 6.70e-01 -0.0248 0.058 0.318 CD4T L1
ENSG00000120800 UTP20 292789 sc-eQTL 5.25e-01 0.0408 0.0641 0.318 CD4T L1
ENSG00000120805 ARL1 165122 sc-eQTL 1.17e-01 0.098 0.0624 0.318 CD4T L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 1.27e-01 -0.067 0.0437 0.318 CD4T L1
ENSG00000075188 NUP37 -547226 sc-eQTL 6.07e-02 0.143 0.0759 0.318 CD8T L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 5.04e-01 0.0555 0.0829 0.318 CD8T L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 6.73e-01 0.023 0.0544 0.318 CD8T L1
ENSG00000120800 UTP20 292789 sc-eQTL 7.72e-01 -0.02 0.0687 0.318 CD8T L1
ENSG00000120805 ARL1 165122 sc-eQTL 8.20e-01 0.0173 0.0758 0.318 CD8T L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 8.45e-01 0.0105 0.0539 0.318 CD8T L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.61e-01 0.108 0.0768 0.318 CD8T L1
ENSG00000075188 NUP37 -547226 sc-eQTL 8.89e-01 -0.0121 0.0867 0.32 DC L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.88e-01 -0.0214 0.0793 0.32 DC L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 1.86e-01 -0.115 0.0869 0.32 DC L1
ENSG00000120800 UTP20 292789 sc-eQTL 3.03e-01 -0.0962 0.0933 0.32 DC L1
ENSG00000120805 ARL1 165122 sc-eQTL 4.85e-01 0.0676 0.0966 0.32 DC L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.66e-01 0.0752 0.0831 0.32 DC L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 7.47e-01 0.0222 0.0687 0.32 DC L1
ENSG00000139354 GAS2L3 999211 sc-eQTL 4.07e-01 -0.0717 0.0863 0.32 DC L1
ENSG00000185480 PARPBP -547291 sc-eQTL 3.12e-01 0.0916 0.0904 0.32 DC L1
ENSG00000075188 NUP37 -547226 sc-eQTL 8.10e-01 -0.0175 0.0731 0.318 Mono L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.08e-01 -0.00712 0.0619 0.318 Mono L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 8.81e-01 0.0116 0.0776 0.318 Mono L1
ENSG00000120800 UTP20 292789 sc-eQTL 7.47e-02 0.154 0.0859 0.318 Mono L1
ENSG00000120805 ARL1 165122 sc-eQTL 6.51e-01 -0.036 0.0796 0.318 Mono L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.97e-01 0.0181 0.07 0.318 Mono L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 7.06e-01 -0.0215 0.0571 0.318 Mono L1
ENSG00000139354 GAS2L3 999211 sc-eQTL 3.05e-01 -0.0637 0.062 0.318 Mono L1
ENSG00000075188 NUP37 -547226 sc-eQTL 6.54e-01 -0.035 0.0778 0.318 NK L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 5.90e-01 0.039 0.0722 0.318 NK L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 2.34e-01 0.0623 0.0522 0.318 NK L1
ENSG00000120800 UTP20 292789 sc-eQTL 5.35e-01 0.0523 0.0842 0.318 NK L1
ENSG00000120805 ARL1 165122 sc-eQTL 5.17e-01 -0.0503 0.0774 0.318 NK L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.82e-01 0.0162 0.0584 0.318 NK L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 6.95e-01 0.0326 0.0831 0.318 NK L1
ENSG00000185480 PARPBP -547291 sc-eQTL 2.16e-01 0.121 0.0971 0.318 NK L1
ENSG00000017427 IGF1 -908850 sc-eQTL 3.31e-01 0.0288 0.0295 0.318 Other_T L1
ENSG00000075188 NUP37 -547226 sc-eQTL 9.01e-01 0.00701 0.0563 0.318 Other_T L1
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.34e-01 0.0644 0.0822 0.318 Other_T L1
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.06e-01 -0.00702 0.0594 0.318 Other_T L1
ENSG00000120800 UTP20 292789 sc-eQTL 4.86e-01 0.0647 0.0926 0.318 Other_T L1
ENSG00000120805 ARL1 165122 sc-eQTL 3.87e-01 0.0585 0.0675 0.318 Other_T L1
ENSG00000120860 WASHC3 -489255 sc-eQTL 4.12e-01 -0.0493 0.06 0.318 Other_T L1
ENSG00000136048 DRAM1 -304686 sc-eQTL 2.11e-01 -0.0901 0.0718 0.318 Other_T L1
ENSG00000185480 PARPBP -547291 sc-eQTL 3.92e-01 -0.0514 0.0599 0.318 Other_T L1
ENSG00000281344 HELLPAR -624691 sc-eQTL 6.20e-01 0.0347 0.0698 0.318 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -908850 sc-eQTL 4.22e-01 -0.0156 0.0194 0.314 B_Activated L2
ENSG00000075188 NUP37 -547226 sc-eQTL 6.51e-01 -0.0456 0.101 0.314 B_Activated L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 1.80e-01 -0.0996 0.0741 0.314 B_Activated L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 8.06e-01 0.026 0.106 0.314 B_Activated L2
ENSG00000120800 UTP20 292789 sc-eQTL 9.58e-01 -0.00545 0.102 0.314 B_Activated L2
ENSG00000120805 ARL1 165122 sc-eQTL 7.13e-01 0.0389 0.106 0.314 B_Activated L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.01e-02 0.217 0.0993 0.314 B_Activated L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 9.01e-01 -0.0126 0.101 0.314 B_Activated L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 7.40e-01 0.0276 0.083 0.314 B_Activated L2
ENSG00000185480 PARPBP -547291 sc-eQTL 5.21e-01 0.0537 0.0835 0.314 B_Activated L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 5.42e-01 0.0479 0.0784 0.314 B_Activated L2
ENSG00000017427 IGF1 -908850 sc-eQTL 2.99e-01 -0.0408 0.0391 0.318 B_Intermediate L2
ENSG00000075188 NUP37 -547226 sc-eQTL 9.67e-01 0.00404 0.0978 0.318 B_Intermediate L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.09e-01 -0.0196 0.0525 0.318 B_Intermediate L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.60e-01 0.071 0.0774 0.318 B_Intermediate L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.71e-01 0.118 0.0858 0.318 B_Intermediate L2
ENSG00000120805 ARL1 165122 sc-eQTL 3.53e-01 -0.0901 0.0968 0.318 B_Intermediate L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 9.35e-01 0.00659 0.0801 0.318 B_Intermediate L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.55e-01 0.122 0.0856 0.318 B_Intermediate L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 3.45e-01 -0.0853 0.0902 0.318 B_Intermediate L2
ENSG00000185480 PARPBP -547291 sc-eQTL 2.36e-01 0.112 0.0946 0.318 B_Intermediate L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 8.57e-01 0.0164 0.091 0.318 B_Intermediate L2
ENSG00000017427 IGF1 -908850 sc-eQTL 9.21e-01 0.00359 0.0363 0.319 B_Memory L2
ENSG00000075188 NUP37 -547226 sc-eQTL 1.37e-01 -0.142 0.0954 0.319 B_Memory L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.32e-01 -0.0214 0.0626 0.319 B_Memory L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.56e-01 0.0792 0.0855 0.319 B_Memory L2
ENSG00000120800 UTP20 292789 sc-eQTL 7.53e-01 0.0297 0.0941 0.319 B_Memory L2
ENSG00000120805 ARL1 165122 sc-eQTL 6.14e-01 0.0472 0.0935 0.319 B_Memory L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 2.28e-01 0.101 0.0834 0.319 B_Memory L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 6.28e-01 0.0425 0.0877 0.319 B_Memory L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 7.34e-01 -0.0307 0.0903 0.319 B_Memory L2
ENSG00000185480 PARPBP -547291 sc-eQTL 1.80e-01 0.124 0.092 0.319 B_Memory L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 4.57e-01 0.0626 0.084 0.319 B_Memory L2
ENSG00000017427 IGF1 -908850 sc-eQTL 4.96e-01 0.0338 0.0496 0.318 B_Naive1 L2
ENSG00000075188 NUP37 -547226 sc-eQTL 9.20e-01 -0.00898 0.0898 0.318 B_Naive1 L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 3.80e-01 0.041 0.0466 0.318 B_Naive1 L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 5.39e-01 0.0406 0.066 0.318 B_Naive1 L2
ENSG00000120800 UTP20 292789 sc-eQTL 7.78e-01 -0.0221 0.0784 0.318 B_Naive1 L2
ENSG00000120805 ARL1 165122 sc-eQTL 5.31e-01 0.0549 0.0874 0.318 B_Naive1 L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 5.46e-01 -0.04 0.0662 0.318 B_Naive1 L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 2.73e-01 0.0787 0.0716 0.318 B_Naive1 L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 4.99e-02 0.19 0.0966 0.318 B_Naive1 L2
ENSG00000185480 PARPBP -547291 sc-eQTL 4.54e-01 0.0712 0.0948 0.318 B_Naive1 L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 7.36e-01 -0.03 0.0888 0.318 B_Naive1 L2
ENSG00000017427 IGF1 -908850 sc-eQTL 4.91e-02 -0.0855 0.0432 0.32 B_Naive2 L2
ENSG00000075188 NUP37 -547226 sc-eQTL 9.14e-01 0.00969 0.0894 0.32 B_Naive2 L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.74e-01 0.0343 0.0478 0.32 B_Naive2 L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 6.64e-01 -0.0323 0.0741 0.32 B_Naive2 L2
ENSG00000120800 UTP20 292789 sc-eQTL 8.08e-01 -0.0209 0.086 0.32 B_Naive2 L2
ENSG00000120805 ARL1 165122 sc-eQTL 3.56e-01 0.0871 0.0942 0.32 B_Naive2 L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 1.34e-01 0.123 0.0818 0.32 B_Naive2 L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 2.63e-01 0.091 0.0812 0.32 B_Naive2 L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 5.89e-01 0.0463 0.0857 0.32 B_Naive2 L2
ENSG00000185480 PARPBP -547291 sc-eQTL 4.74e-01 0.0708 0.0987 0.32 B_Naive2 L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 7.99e-01 -0.0217 0.0852 0.32 B_Naive2 L2
ENSG00000075188 NUP37 -547226 sc-eQTL 1.13e-01 -0.156 0.098 0.32 CD4_CTL L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.03e-01 -0.012 0.0989 0.32 CD4_CTL L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 1.55e-01 -0.123 0.086 0.32 CD4_CTL L2
ENSG00000120800 UTP20 292789 sc-eQTL 9.77e-01 0.0027 0.0951 0.32 CD4_CTL L2
ENSG00000120805 ARL1 165122 sc-eQTL 8.03e-01 0.0252 0.101 0.32 CD4_CTL L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 6.85e-01 0.0393 0.0966 0.32 CD4_CTL L2
ENSG00000075188 NUP37 -547226 sc-eQTL 5.11e-01 -0.0468 0.0711 0.318 CD4_Naive L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 2.02e-01 0.105 0.0817 0.318 CD4_Naive L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.54e-01 0.00366 0.0632 0.318 CD4_Naive L2
ENSG00000120800 UTP20 292789 sc-eQTL 7.42e-01 0.0227 0.0689 0.318 CD4_Naive L2
ENSG00000120805 ARL1 165122 sc-eQTL 3.49e-01 0.0699 0.0745 0.318 CD4_Naive L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 1.13e-01 -0.0826 0.0518 0.318 CD4_Naive L2
ENSG00000075188 NUP37 -547226 sc-eQTL 9.68e-01 -0.00305 0.0753 0.318 CD4_TCM L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.23e-01 0.0696 0.0867 0.318 CD4_TCM L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 2.89e-01 -0.0713 0.0671 0.318 CD4_TCM L2
ENSG00000120800 UTP20 292789 sc-eQTL 6.74e-01 0.0355 0.0841 0.318 CD4_TCM L2
ENSG00000120805 ARL1 165122 sc-eQTL 9.70e-02 0.13 0.0782 0.318 CD4_TCM L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 5.30e-01 -0.0325 0.0516 0.318 CD4_TCM L2
ENSG00000075188 NUP37 -547226 sc-eQTL 2.84e-01 -0.0954 0.0888 0.318 CD4_TEM L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 5.92e-01 0.046 0.0857 0.318 CD4_TEM L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.23e-01 -0.00801 0.0825 0.318 CD4_TEM L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.42e-01 0.131 0.0889 0.318 CD4_TEM L2
ENSG00000120805 ARL1 165122 sc-eQTL 5.47e-01 -0.0509 0.0843 0.318 CD4_TEM L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 2.40e-01 0.0887 0.0753 0.318 CD4_TEM L2
ENSG00000075188 NUP37 -547226 sc-eQTL 2.51e-01 0.0949 0.0825 0.318 CD8_CTL L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.61e-01 0.0373 0.0849 0.318 CD8_CTL L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 5.29e-01 -0.0428 0.0678 0.318 CD8_CTL L2
ENSG00000120800 UTP20 292789 sc-eQTL 9.66e-01 0.00393 0.0918 0.318 CD8_CTL L2
ENSG00000120805 ARL1 165122 sc-eQTL 6.03e-01 -0.0473 0.0908 0.318 CD8_CTL L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.08e-01 0.0789 0.0773 0.318 CD8_CTL L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 3.69e-01 0.0866 0.0962 0.318 CD8_CTL L2
ENSG00000075188 NUP37 -547226 sc-eQTL 6.76e-01 0.0367 0.0879 0.318 CD8_Naive L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.84e-01 0.0612 0.0873 0.318 CD8_Naive L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 5.34e-01 0.0488 0.0784 0.318 CD8_Naive L2
ENSG00000120800 UTP20 292789 sc-eQTL 8.25e-01 -0.0185 0.0834 0.318 CD8_Naive L2
ENSG00000120805 ARL1 165122 sc-eQTL 6.39e-01 -0.0425 0.0905 0.318 CD8_Naive L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.80e-01 -0.0167 0.0596 0.318 CD8_Naive L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.74e-01 0.125 0.0917 0.318 CD8_Naive L2
ENSG00000075188 NUP37 -547226 sc-eQTL 2.61e-01 0.105 0.0929 0.324 CD8_TCM L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 1.33e-01 0.125 0.0831 0.324 CD8_TCM L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.64e-01 0.0633 0.0864 0.324 CD8_TCM L2
ENSG00000120800 UTP20 292789 sc-eQTL 2.84e-01 0.101 0.094 0.324 CD8_TCM L2
ENSG00000120805 ARL1 165122 sc-eQTL 9.73e-01 0.00316 0.0927 0.324 CD8_TCM L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 8.76e-01 0.0129 0.083 0.324 CD8_TCM L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 4.52e-01 -0.068 0.0903 0.324 CD8_TCM L2
ENSG00000075188 NUP37 -547226 sc-eQTL 8.67e-01 -0.0158 0.094 0.317 CD8_TEM L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.65e-01 -0.0385 0.0889 0.317 CD8_TEM L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 1.25e-01 -0.146 0.0947 0.317 CD8_TEM L2
ENSG00000120800 UTP20 292789 sc-eQTL 7.07e-01 0.0385 0.102 0.317 CD8_TEM L2
ENSG00000120805 ARL1 165122 sc-eQTL 4.91e-01 -0.0674 0.0976 0.317 CD8_TEM L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.61e-01 0.078 0.0853 0.317 CD8_TEM L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.62e-01 -0.0164 0.0942 0.317 CD8_TEM L2
ENSG00000017427 IGF1 -908850 sc-eQTL 8.30e-01 0.00693 0.0322 0.32 MAIT L2
ENSG00000075188 NUP37 -547226 sc-eQTL 5.52e-01 0.0538 0.0903 0.32 MAIT L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 3.85e-01 -0.0765 0.0879 0.32 MAIT L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.49e-01 0.0732 0.0779 0.32 MAIT L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.63e-01 0.13 0.0932 0.32 MAIT L2
ENSG00000120805 ARL1 165122 sc-eQTL 3.45e-01 0.0901 0.0953 0.32 MAIT L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 8.35e-01 -0.0166 0.0794 0.32 MAIT L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 9.55e-01 -0.00512 0.0901 0.32 MAIT L2
ENSG00000185480 PARPBP -547291 sc-eQTL 3.03e-01 -0.0908 0.088 0.32 MAIT L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 7.27e-01 -0.0273 0.0781 0.32 MAIT L2
ENSG00000075188 NUP37 -547226 sc-eQTL 8.40e-01 -0.0199 0.0984 0.324 NK_CD56bright L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.30e-01 0.0343 0.0712 0.324 NK_CD56bright L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 6.24e-03 0.223 0.0808 0.324 NK_CD56bright L2
ENSG00000120800 UTP20 292789 sc-eQTL 3.24e-01 0.0948 0.0959 0.324 NK_CD56bright L2
ENSG00000120805 ARL1 165122 sc-eQTL 1.81e-01 -0.125 0.0935 0.324 NK_CD56bright L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 6.09e-01 0.0435 0.0848 0.324 NK_CD56bright L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 7.76e-01 0.0255 0.0893 0.324 NK_CD56bright L2
ENSG00000185480 PARPBP -547291 sc-eQTL 7.62e-01 -0.0287 0.0943 0.324 NK_CD56bright L2
ENSG00000075188 NUP37 -547226 sc-eQTL 3.27e-01 0.0843 0.0859 0.319 NK_CD56dim L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 5.42e-01 0.0513 0.084 0.319 NK_CD56dim L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.86e-01 0.0444 0.0635 0.319 NK_CD56dim L2
ENSG00000120800 UTP20 292789 sc-eQTL 4.09e-01 0.073 0.0881 0.319 NK_CD56dim L2
ENSG00000120805 ARL1 165122 sc-eQTL 9.71e-01 0.0031 0.0854 0.319 NK_CD56dim L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.96e-01 0.019 0.0731 0.319 NK_CD56dim L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.40e-01 0.0179 0.0888 0.319 NK_CD56dim L2
ENSG00000185480 PARPBP -547291 sc-eQTL 2.06e-01 0.126 0.0996 0.319 NK_CD56dim L2
ENSG00000075188 NUP37 -547226 sc-eQTL 6.93e-01 0.0361 0.0913 0.329 NK_HLA L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.09e-01 0.0107 0.0937 0.329 NK_HLA L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 8.03e-01 0.0188 0.0753 0.329 NK_HLA L2
ENSG00000120800 UTP20 292789 sc-eQTL 2.83e-01 0.106 0.0982 0.329 NK_HLA L2
ENSG00000120805 ARL1 165122 sc-eQTL 3.34e-01 0.0972 0.1 0.329 NK_HLA L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 8.90e-02 -0.158 0.0927 0.329 NK_HLA L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 5.89e-01 0.0518 0.0959 0.329 NK_HLA L2
ENSG00000185480 PARPBP -547291 sc-eQTL 4.50e-01 0.0714 0.0943 0.329 NK_HLA L2
ENSG00000075188 NUP37 -547226 sc-eQTL 1.47e-01 -0.127 0.0869 0.319 NK_cytokine L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.64e-01 0.0245 0.0817 0.319 NK_cytokine L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 7.28e-01 -0.0216 0.062 0.319 NK_cytokine L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.33e-01 -0.13 0.0861 0.319 NK_cytokine L2
ENSG00000120805 ARL1 165122 sc-eQTL 6.54e-01 -0.0391 0.087 0.319 NK_cytokine L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.56e-01 0.0633 0.0684 0.319 NK_cytokine L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.61e-01 -0.0156 0.0893 0.319 NK_cytokine L2
ENSG00000185480 PARPBP -547291 sc-eQTL 6.42e-01 -0.0449 0.0964 0.319 NK_cytokine L2
ENSG00000017427 IGF1 -908850 sc-eQTL 6.52e-01 -0.0331 0.0733 0.315 PB L2
ENSG00000075188 NUP37 -547226 sc-eQTL 2.18e-01 0.121 0.0981 0.315 PB L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.43e-02 0.136 0.0755 0.315 PB L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 8.04e-01 0.0274 0.11 0.315 PB L2
ENSG00000120800 UTP20 292789 sc-eQTL 5.68e-01 0.0723 0.126 0.315 PB L2
ENSG00000120805 ARL1 165122 sc-eQTL 7.58e-01 -0.024 0.0777 0.315 PB L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 1.80e-01 -0.12 0.0889 0.315 PB L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 6.46e-02 0.167 0.0896 0.315 PB L2
ENSG00000139351 SYCP3 -166578 sc-eQTL 6.22e-01 -0.0522 0.106 0.315 PB L2
ENSG00000185480 PARPBP -547291 sc-eQTL 3.22e-02 0.206 0.0949 0.315 PB L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 4.39e-02 0.179 0.088 0.315 PB L2
ENSG00000017427 IGF1 -908850 sc-eQTL 7.55e-01 -0.0102 0.0326 0.315 Pro_T L2
ENSG00000075188 NUP37 -547226 sc-eQTL 5.37e-01 0.0407 0.0658 0.315 Pro_T L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 1.73e-01 0.119 0.0869 0.315 Pro_T L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.27e-01 0.0513 0.0645 0.315 Pro_T L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.48e-02 -0.223 0.0909 0.315 Pro_T L2
ENSG00000120805 ARL1 165122 sc-eQTL 5.69e-01 -0.0398 0.0697 0.315 Pro_T L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 8.30e-01 0.0163 0.0758 0.315 Pro_T L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.69e-01 0.0107 0.065 0.315 Pro_T L2
ENSG00000185480 PARPBP -547291 sc-eQTL 3.34e-01 0.0582 0.0601 0.315 Pro_T L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 7.59e-01 0.0202 0.0659 0.315 Pro_T L2
ENSG00000075188 NUP37 -547226 sc-eQTL 7.89e-01 0.0246 0.0916 0.318 Treg L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 1.03e-01 0.155 0.0947 0.318 Treg L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 2.08e-01 0.105 0.0829 0.318 Treg L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.35e-01 -0.135 0.0902 0.318 Treg L2
ENSG00000120805 ARL1 165122 sc-eQTL 2.54e-01 0.107 0.0935 0.318 Treg L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 5.25e-01 -0.0484 0.0761 0.318 Treg L2
ENSG00000075188 NUP37 -547226 sc-eQTL 3.92e-01 0.0737 0.0859 0.317 cDC L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 8.30e-01 0.0181 0.0839 0.317 cDC L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.90e-01 -0.00134 0.108 0.317 cDC L2
ENSG00000120800 UTP20 292789 sc-eQTL 5.65e-01 -0.0565 0.0981 0.317 cDC L2
ENSG00000120805 ARL1 165122 sc-eQTL 8.55e-02 0.175 0.101 0.317 cDC L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 2.91e-02 0.207 0.0943 0.317 cDC L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 4.86e-01 0.0519 0.0744 0.317 cDC L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 9.35e-01 -0.00744 0.091 0.317 cDC L2
ENSG00000185480 PARPBP -547291 sc-eQTL 5.93e-01 -0.0455 0.0848 0.317 cDC L2
ENSG00000075188 NUP37 -547226 sc-eQTL 9.34e-01 -0.00679 0.0824 0.318 cMono_IL1B L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.97e-01 0.000219 0.0621 0.318 cMono_IL1B L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 7.17e-01 -0.0299 0.0824 0.318 cMono_IL1B L2
ENSG00000120800 UTP20 292789 sc-eQTL 3.10e-02 0.199 0.0917 0.318 cMono_IL1B L2
ENSG00000120805 ARL1 165122 sc-eQTL 7.82e-02 0.146 0.0825 0.318 cMono_IL1B L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.93e-01 0.0612 0.0715 0.318 cMono_IL1B L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 9.59e-01 -0.00318 0.0611 0.318 cMono_IL1B L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 1.92e-01 -0.0871 0.0666 0.318 cMono_IL1B L2
ENSG00000075188 NUP37 -547226 sc-eQTL 8.00e-01 -0.0226 0.0888 0.318 cMono_S100A L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.75e-01 -0.0486 0.068 0.318 cMono_S100A L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.99e-01 0.000108 0.0828 0.318 cMono_S100A L2
ENSG00000120800 UTP20 292789 sc-eQTL 1.29e-01 0.147 0.0965 0.318 cMono_S100A L2
ENSG00000120805 ARL1 165122 sc-eQTL 2.60e-02 -0.202 0.0901 0.318 cMono_S100A L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 3.00e-01 -0.0873 0.0841 0.318 cMono_S100A L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.70e-01 0.0108 0.0657 0.318 cMono_S100A L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 1.74e-01 -0.112 0.0819 0.318 cMono_S100A L2
ENSG00000075188 NUP37 -547226 sc-eQTL 1.57e-01 0.167 0.118 0.33 gdT L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 5.62e-01 0.0645 0.111 0.33 gdT L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.35e-01 -0.0807 0.0833 0.33 gdT L2
ENSG00000120800 UTP20 292789 sc-eQTL 5.28e-02 0.213 0.109 0.33 gdT L2
ENSG00000120805 ARL1 165122 sc-eQTL 1.16e-02 0.29 0.113 0.33 gdT L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 2.96e-01 0.113 0.108 0.33 gdT L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 6.45e-01 -0.0506 0.11 0.33 gdT L2
ENSG00000185480 PARPBP -547291 sc-eQTL 6.91e-01 -0.0429 0.108 0.33 gdT L2
ENSG00000281344 HELLPAR -624691 sc-eQTL 1.49e-01 0.142 0.098 0.33 gdT L2
ENSG00000075188 NUP37 -547226 sc-eQTL 6.17e-01 0.0452 0.0904 0.316 intMono L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 7.75e-01 0.0237 0.0827 0.316 intMono L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.99e-01 0.000119 0.0972 0.316 intMono L2
ENSG00000120800 UTP20 292789 sc-eQTL 3.75e-01 0.0807 0.0908 0.316 intMono L2
ENSG00000120805 ARL1 165122 sc-eQTL 8.34e-01 -0.0197 0.0941 0.316 intMono L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 4.35e-01 -0.0711 0.0909 0.316 intMono L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.12e-01 0.126 0.079 0.316 intMono L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 8.57e-01 0.0158 0.088 0.316 intMono L2
ENSG00000075188 NUP37 -547226 sc-eQTL 3.90e-01 -0.0782 0.0908 0.321 ncMono L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 9.16e-01 0.00888 0.084 0.321 ncMono L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.53e-01 -0.0935 0.1 0.321 ncMono L2
ENSG00000120800 UTP20 292789 sc-eQTL 4.75e-01 -0.0629 0.0878 0.321 ncMono L2
ENSG00000120805 ARL1 165122 sc-eQTL 7.69e-01 -0.0249 0.0845 0.321 ncMono L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 9.47e-01 0.00539 0.0813 0.321 ncMono L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 1.79e-01 -0.102 0.0754 0.321 ncMono L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 1.69e-01 0.108 0.0783 0.321 ncMono L2
ENSG00000075188 NUP37 -547226 sc-eQTL 7.18e-01 0.0389 0.107 0.345 pDC L2
ENSG00000111666 CHPT1 -124053 sc-eQTL 3.00e-01 -0.0968 0.0931 0.345 pDC L2
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.89e-01 -0.0685 0.0987 0.345 pDC L2
ENSG00000120800 UTP20 292789 sc-eQTL 7.95e-01 -0.0256 0.0984 0.345 pDC L2
ENSG00000120805 ARL1 165122 sc-eQTL 5.60e-01 -0.0604 0.103 0.345 pDC L2
ENSG00000120860 WASHC3 -489255 sc-eQTL 2.12e-01 -0.113 0.0898 0.345 pDC L2
ENSG00000136048 DRAM1 -304686 sc-eQTL 5.53e-01 -0.0415 0.0697 0.345 pDC L2
ENSG00000139354 GAS2L3 999211 sc-eQTL 8.65e-02 -0.142 0.0826 0.345 pDC L2
ENSG00000185480 PARPBP -547291 sc-eQTL 2.18e-01 0.114 0.0923 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -908850 sc-eQTL 4.71e-01 -0.0329 0.0456 0.318 B_Memory LOneK1K
ENSG00000075188 NUP37 -547226 sc-eQTL 1.49e-01 -0.132 0.0912 0.318 B_Memory LOneK1K
ENSG00000111666 CHPT1 -124053 sc-eQTL 4.93e-01 -0.0331 0.0482 0.318 B_Memory LOneK1K
ENSG00000111670 GNPTAB -258065 sc-eQTL 2.36e-01 0.0898 0.0756 0.318 B_Memory LOneK1K
ENSG00000120800 UTP20 292789 sc-eQTL 2.06e-01 0.0988 0.0778 0.318 B_Memory LOneK1K
ENSG00000120805 ARL1 165122 sc-eQTL 4.25e-01 -0.0704 0.0882 0.318 B_Memory LOneK1K
ENSG00000120860 WASHC3 -489255 sc-eQTL 1.97e-01 0.0849 0.0657 0.318 B_Memory LOneK1K
ENSG00000136048 DRAM1 -304686 sc-eQTL 4.99e-01 0.0534 0.0789 0.318 B_Memory LOneK1K
ENSG00000139351 SYCP3 -166578 sc-eQTL 6.19e-01 -0.0453 0.0909 0.318 B_Memory LOneK1K
ENSG00000185480 PARPBP -547291 sc-eQTL 1.66e-01 0.132 0.0948 0.318 B_Memory LOneK1K
ENSG00000281344 HELLPAR -624691 sc-eQTL 4.21e-01 0.0759 0.0943 0.318 B_Memory LOneK1K
ENSG00000017427 IGF1 -908850 sc-eQTL 7.46e-01 -0.017 0.0524 0.318 B_Naive LOneK1K
ENSG00000075188 NUP37 -547226 sc-eQTL 8.69e-01 0.0142 0.0858 0.318 B_Naive LOneK1K
ENSG00000111666 CHPT1 -124053 sc-eQTL 3.80e-01 0.0372 0.0423 0.318 B_Naive LOneK1K
ENSG00000111670 GNPTAB -258065 sc-eQTL 4.71e-01 0.0438 0.0606 0.318 B_Naive LOneK1K
ENSG00000120800 UTP20 292789 sc-eQTL 5.87e-01 -0.0404 0.0742 0.318 B_Naive LOneK1K
ENSG00000120805 ARL1 165122 sc-eQTL 1.72e-01 0.116 0.0843 0.318 B_Naive LOneK1K
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.17e-01 0.023 0.0634 0.318 B_Naive LOneK1K
ENSG00000136048 DRAM1 -304686 sc-eQTL 2.29e-01 0.08 0.0663 0.318 B_Naive LOneK1K
ENSG00000139351 SYCP3 -166578 sc-eQTL 1.25e-01 0.147 0.0954 0.318 B_Naive LOneK1K
ENSG00000185480 PARPBP -547291 sc-eQTL 3.65e-01 0.0885 0.0976 0.318 B_Naive LOneK1K
ENSG00000281344 HELLPAR -624691 sc-eQTL 6.22e-01 -0.0439 0.0889 0.318 B_Naive LOneK1K
ENSG00000075188 NUP37 -547226 sc-eQTL 8.66e-01 -0.0128 0.0759 0.318 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.08e-01 -0.0315 0.0613 0.318 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -258065 sc-eQTL 8.61e-01 -0.0139 0.079 0.318 CD14_Mono LOneK1K
ENSG00000120800 UTP20 292789 sc-eQTL 1.52e-02 0.225 0.0921 0.318 CD14_Mono LOneK1K
ENSG00000120805 ARL1 165122 sc-eQTL 7.91e-01 -0.0212 0.0799 0.318 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -489255 sc-eQTL 9.75e-01 -0.0022 0.0695 0.318 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -304686 sc-eQTL 9.71e-01 -0.0021 0.057 0.318 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 999211 sc-eQTL 2.05e-01 -0.0829 0.0653 0.318 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -547226 sc-eQTL 8.32e-01 -0.0189 0.0891 0.319 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.96e-01 0.0304 0.0778 0.319 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -258065 sc-eQTL 9.99e-01 -7.83e-05 0.0942 0.319 CD16_Mono LOneK1K
ENSG00000120800 UTP20 292789 sc-eQTL 5.08e-01 -0.06 0.0905 0.319 CD16_Mono LOneK1K
ENSG00000120805 ARL1 165122 sc-eQTL 2.91e-01 -0.095 0.0898 0.319 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -489255 sc-eQTL 7.09e-01 -0.0291 0.0781 0.319 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -304686 sc-eQTL 7.78e-01 -0.019 0.0674 0.319 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 999211 sc-eQTL 5.98e-01 0.0434 0.0822 0.319 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -547226 sc-eQTL 9.37e-01 -0.00655 0.0824 0.319 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -124053 sc-eQTL 6.64e-01 0.0349 0.0803 0.319 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -258065 sc-eQTL 3.36e-01 0.053 0.0549 0.319 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 292789 sc-eQTL 7.31e-01 0.029 0.0844 0.319 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 165122 sc-eQTL 8.04e-01 -0.0194 0.0783 0.319 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -489255 sc-eQTL 9.84e-01 0.00129 0.0635 0.319 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -304686 sc-eQTL 8.53e-01 0.0158 0.0852 0.319 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -547291 sc-eQTL 4.58e-01 0.0745 0.1 0.319 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -124053 eQTL 1.45e-02 0.0663 0.0271 0.0 0.0 0.303
ENSG00000111670 GNPTAB -258065 eQTL 2.31e-03 0.0456 0.0149 0.00235 0.0 0.303
ENSG00000120805 ARL1 165122 eQTL 0.042 0.0333 0.0163 0.00111 0.0 0.303
ENSG00000136048 DRAM1 -304686 eQTL 0.0277 -0.0335 0.0152 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina