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Genes within 1Mb (chr12:101572474:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -909270 sc-eQTL 9.14e-01 0.00385 0.0356 0.528 B L1
ENSG00000075188 NUP37 -547646 sc-eQTL 9.09e-01 0.00706 0.0619 0.528 B L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 2.41e-01 -0.0441 0.0375 0.528 B L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 8.85e-01 -0.00787 0.0544 0.528 B L1
ENSG00000120800 UTP20 292369 sc-eQTL 9.55e-01 0.00352 0.0619 0.528 B L1
ENSG00000120805 ARL1 164702 sc-eQTL 2.73e-01 0.0583 0.053 0.528 B L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 3.46e-02 0.0896 0.0421 0.528 B L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.06e-02 0.0842 0.0479 0.528 B L1
ENSG00000139351 SYCP3 -166998 sc-eQTL 1.52e-02 0.185 0.0757 0.528 B L1
ENSG00000185480 PARPBP -547711 sc-eQTL 6.03e-02 0.138 0.0729 0.528 B L1
ENSG00000281344 HELLPAR -625111 sc-eQTL 8.27e-01 0.015 0.0685 0.528 B L1
ENSG00000075188 NUP37 -547646 sc-eQTL 7.72e-01 -0.0164 0.0567 0.528 CD4T L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 4.65e-01 0.056 0.0764 0.528 CD4T L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.06e-01 -0.0543 0.0529 0.528 CD4T L1
ENSG00000120800 UTP20 292369 sc-eQTL 5.09e-01 0.0388 0.0586 0.528 CD4T L1
ENSG00000120805 ARL1 164702 sc-eQTL 9.09e-02 0.0968 0.057 0.528 CD4T L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.67e-01 -0.00672 0.0402 0.528 CD4T L1
ENSG00000075188 NUP37 -547646 sc-eQTL 7.44e-03 0.184 0.0682 0.528 CD8T L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 9.14e-01 -0.00809 0.0752 0.528 CD8T L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 9.52e-01 0.00296 0.0494 0.528 CD8T L1
ENSG00000120800 UTP20 292369 sc-eQTL 7.47e-01 -0.0201 0.0623 0.528 CD8T L1
ENSG00000120805 ARL1 164702 sc-eQTL 4.37e-01 0.0535 0.0686 0.528 CD8T L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.74e-01 0.0534 0.0487 0.528 CD8T L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.23e-01 0.0156 0.07 0.528 CD8T L1
ENSG00000075188 NUP37 -547646 sc-eQTL 5.56e-01 0.0465 0.0788 0.534 DC L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 7.03e-02 0.13 0.0715 0.534 DC L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 4.36e-01 -0.0618 0.0792 0.534 DC L1
ENSG00000120800 UTP20 292369 sc-eQTL 4.14e-01 -0.0696 0.0849 0.534 DC L1
ENSG00000120805 ARL1 164702 sc-eQTL 9.49e-01 -0.00566 0.088 0.534 DC L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 1.87e-01 0.0998 0.0754 0.534 DC L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 5.83e-01 -0.0344 0.0625 0.534 DC L1
ENSG00000139354 GAS2L3 998791 sc-eQTL 3.39e-02 -0.166 0.0777 0.534 DC L1
ENSG00000185480 PARPBP -547711 sc-eQTL 4.81e-01 0.0581 0.0823 0.534 DC L1
ENSG00000075188 NUP37 -547646 sc-eQTL 9.23e-01 -0.00642 0.066 0.528 Mono L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 9.88e-01 0.000837 0.0559 0.528 Mono L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.46e-01 -0.102 0.0697 0.528 Mono L1
ENSG00000120800 UTP20 292369 sc-eQTL 8.09e-01 0.0189 0.0781 0.528 Mono L1
ENSG00000120805 ARL1 164702 sc-eQTL 2.46e-01 -0.0834 0.0717 0.528 Mono L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.47e-01 0.0732 0.0631 0.528 Mono L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.81e-01 -0.0364 0.0515 0.528 Mono L1
ENSG00000139354 GAS2L3 998791 sc-eQTL 7.29e-01 0.0194 0.0561 0.528 Mono L1
ENSG00000075188 NUP37 -547646 sc-eQTL 4.98e-01 0.048 0.0706 0.528 NK L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.05e-01 0.0673 0.0655 0.528 NK L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 8.16e-01 0.0111 0.0476 0.528 NK L1
ENSG00000120800 UTP20 292369 sc-eQTL 6.58e-01 0.0339 0.0765 0.528 NK L1
ENSG00000120805 ARL1 164702 sc-eQTL 6.36e-01 -0.0333 0.0703 0.528 NK L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 7.17e-01 0.0192 0.053 0.528 NK L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.71e-01 -0.0544 0.0754 0.528 NK L1
ENSG00000185480 PARPBP -547711 sc-eQTL 4.17e-01 0.0719 0.0884 0.528 NK L1
ENSG00000017427 IGF1 -909270 sc-eQTL 3.59e-01 0.0247 0.0269 0.528 Other_T L1
ENSG00000075188 NUP37 -547646 sc-eQTL 1.79e-01 -0.0691 0.0512 0.528 Other_T L1
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.27e-01 0.114 0.0747 0.528 Other_T L1
ENSG00000111670 GNPTAB -258485 sc-eQTL 4.76e-01 -0.0386 0.0541 0.528 Other_T L1
ENSG00000120800 UTP20 292369 sc-eQTL 5.39e-01 -0.0521 0.0846 0.528 Other_T L1
ENSG00000120805 ARL1 164702 sc-eQTL 8.36e-03 0.162 0.0607 0.528 Other_T L1
ENSG00000120860 WASHC3 -489675 sc-eQTL 9.11e-01 -0.00612 0.0549 0.528 Other_T L1
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.71e-01 -0.0475 0.0657 0.528 Other_T L1
ENSG00000185480 PARPBP -547711 sc-eQTL 9.70e-01 0.00203 0.0548 0.528 Other_T L1
ENSG00000281344 HELLPAR -625111 sc-eQTL 2.05e-02 0.147 0.0629 0.528 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -909270 sc-eQTL 4.16e-01 0.0138 0.0169 0.52 B_Activated L2
ENSG00000075188 NUP37 -547646 sc-eQTL 9.36e-01 -0.00708 0.088 0.52 B_Activated L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 7.33e-01 0.0222 0.065 0.52 B_Activated L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 8.74e-01 -0.0146 0.0924 0.52 B_Activated L2
ENSG00000120800 UTP20 292369 sc-eQTL 7.94e-01 -0.0233 0.0893 0.52 B_Activated L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.84e-01 0.0253 0.0923 0.52 B_Activated L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 6.28e-02 0.163 0.0871 0.52 B_Activated L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 1.23e-01 -0.136 0.0877 0.52 B_Activated L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 6.01e-01 0.038 0.0725 0.52 B_Activated L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.73e-01 0.0993 0.0726 0.52 B_Activated L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 9.86e-02 0.113 0.0681 0.52 B_Activated L2
ENSG00000017427 IGF1 -909270 sc-eQTL 6.06e-01 -0.0183 0.0354 0.528 B_Intermediate L2
ENSG00000075188 NUP37 -547646 sc-eQTL 7.73e-01 0.0255 0.0883 0.528 B_Intermediate L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.92e-01 -0.0405 0.0473 0.528 B_Intermediate L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 6.22e-01 0.0346 0.07 0.528 B_Intermediate L2
ENSG00000120800 UTP20 292369 sc-eQTL 3.63e-02 0.162 0.077 0.528 B_Intermediate L2
ENSG00000120805 ARL1 164702 sc-eQTL 5.39e-01 -0.0539 0.0875 0.528 B_Intermediate L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.36e-01 0.015 0.0724 0.528 B_Intermediate L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.89e-02 0.132 0.0771 0.528 B_Intermediate L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 2.18e-01 -0.1 0.0814 0.528 B_Intermediate L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.65e-01 0.119 0.0853 0.528 B_Intermediate L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 8.17e-01 0.019 0.0822 0.528 B_Intermediate L2
ENSG00000017427 IGF1 -909270 sc-eQTL 2.77e-01 -0.0349 0.032 0.528 B_Memory L2
ENSG00000075188 NUP37 -547646 sc-eQTL 4.16e-01 -0.0689 0.0846 0.528 B_Memory L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.81e-01 -0.0485 0.0552 0.528 B_Memory L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 5.36e-01 -0.0469 0.0757 0.528 B_Memory L2
ENSG00000120800 UTP20 292369 sc-eQTL 9.90e-01 0.00105 0.0831 0.528 B_Memory L2
ENSG00000120805 ARL1 164702 sc-eQTL 3.77e-01 0.0731 0.0825 0.528 B_Memory L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 9.41e-01 -0.00551 0.074 0.528 B_Memory L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 1.57e-01 0.11 0.0772 0.528 B_Memory L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 8.29e-01 -0.0173 0.0798 0.528 B_Memory L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.94e-01 0.106 0.0813 0.528 B_Memory L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 5.19e-01 -0.048 0.0743 0.528 B_Memory L2
ENSG00000017427 IGF1 -909270 sc-eQTL 7.35e-01 0.0152 0.0448 0.528 B_Naive1 L2
ENSG00000075188 NUP37 -547646 sc-eQTL 7.22e-01 -0.0289 0.0812 0.528 B_Naive1 L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 5.11e-01 -0.0278 0.0421 0.528 B_Naive1 L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 6.66e-01 0.0258 0.0597 0.528 B_Naive1 L2
ENSG00000120800 UTP20 292369 sc-eQTL 7.10e-01 -0.0264 0.0708 0.528 B_Naive1 L2
ENSG00000120805 ARL1 164702 sc-eQTL 3.54e-01 0.0733 0.0789 0.528 B_Naive1 L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 7.33e-01 0.0204 0.0598 0.528 B_Naive1 L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 1.10e-01 0.104 0.0645 0.528 B_Naive1 L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 7.34e-02 0.157 0.0874 0.528 B_Naive1 L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.67e-01 0.118 0.0854 0.528 B_Naive1 L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 5.26e-01 0.051 0.0803 0.528 B_Naive1 L2
ENSG00000017427 IGF1 -909270 sc-eQTL 8.53e-01 -0.00736 0.0396 0.528 B_Naive2 L2
ENSG00000075188 NUP37 -547646 sc-eQTL 7.99e-01 -0.0207 0.0812 0.528 B_Naive2 L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 8.01e-02 -0.0759 0.0432 0.528 B_Naive2 L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 7.95e-01 -0.0175 0.0674 0.528 B_Naive2 L2
ENSG00000120800 UTP20 292369 sc-eQTL 8.17e-01 0.0181 0.0781 0.528 B_Naive2 L2
ENSG00000120805 ARL1 164702 sc-eQTL 4.41e-01 0.0662 0.0857 0.528 B_Naive2 L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 1.16e-02 0.187 0.0736 0.528 B_Naive2 L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 7.20e-01 0.0265 0.074 0.528 B_Naive2 L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 1.14e-02 0.196 0.0767 0.528 B_Naive2 L2
ENSG00000185480 PARPBP -547711 sc-eQTL 8.24e-01 0.02 0.0898 0.528 B_Naive2 L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 9.78e-01 -0.00212 0.0774 0.528 B_Naive2 L2
ENSG00000075188 NUP37 -547646 sc-eQTL 3.80e-01 -0.0774 0.088 0.52 CD4_CTL L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.79e-01 0.119 0.0879 0.52 CD4_CTL L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.23e-01 -0.0763 0.077 0.52 CD4_CTL L2
ENSG00000120800 UTP20 292369 sc-eQTL 5.26e-01 -0.0539 0.0849 0.52 CD4_CTL L2
ENSG00000120805 ARL1 164702 sc-eQTL 8.15e-01 0.0211 0.09 0.52 CD4_CTL L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 5.49e-01 -0.0518 0.0863 0.52 CD4_CTL L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.43e-01 0.0398 0.0653 0.528 CD4_Naive L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 6.06e-01 0.0389 0.0754 0.528 CD4_Naive L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 4.89e-01 -0.0403 0.0581 0.528 CD4_Naive L2
ENSG00000120800 UTP20 292369 sc-eQTL 5.36e-01 0.0393 0.0633 0.528 CD4_Naive L2
ENSG00000120805 ARL1 164702 sc-eQTL 2.50e-01 0.079 0.0684 0.528 CD4_Naive L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 5.56e-01 -0.0283 0.0479 0.528 CD4_Naive L2
ENSG00000075188 NUP37 -547646 sc-eQTL 1.90e-01 -0.0899 0.0684 0.528 CD4_TCM L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 5.95e-01 0.0421 0.0792 0.528 CD4_TCM L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 7.26e-01 -0.0215 0.0613 0.528 CD4_TCM L2
ENSG00000120800 UTP20 292369 sc-eQTL 5.70e-01 -0.0437 0.0767 0.528 CD4_TCM L2
ENSG00000120805 ARL1 164702 sc-eQTL 1.22e-02 0.179 0.0708 0.528 CD4_TCM L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 9.10e-01 0.00532 0.0471 0.528 CD4_TCM L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.73e-01 0.0458 0.0811 0.528 CD4_TEM L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.57e-01 0.0719 0.078 0.528 CD4_TEM L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 5.81e-01 0.0416 0.0752 0.528 CD4_TEM L2
ENSG00000120800 UTP20 292369 sc-eQTL 9.75e-01 -0.00255 0.0814 0.528 CD4_TEM L2
ENSG00000120805 ARL1 164702 sc-eQTL 3.76e-01 -0.0682 0.0768 0.528 CD4_TEM L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 1.66e-01 0.0953 0.0686 0.528 CD4_TEM L2
ENSG00000075188 NUP37 -547646 sc-eQTL 3.25e-01 0.0728 0.0737 0.528 CD8_CTL L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 6.13e-01 0.0384 0.0758 0.528 CD8_CTL L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 8.45e-01 -0.0119 0.0606 0.528 CD8_CTL L2
ENSG00000120800 UTP20 292369 sc-eQTL 4.56e-01 0.0611 0.0819 0.528 CD8_CTL L2
ENSG00000120805 ARL1 164702 sc-eQTL 8.46e-01 0.0158 0.0811 0.528 CD8_CTL L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 1.90e-01 0.0906 0.0689 0.528 CD8_CTL L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 7.03e-01 0.0329 0.086 0.528 CD8_CTL L2
ENSG00000075188 NUP37 -547646 sc-eQTL 1.83e-02 0.187 0.0788 0.528 CD8_Naive L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 8.58e-01 -0.0142 0.0794 0.528 CD8_Naive L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.35e-01 0.106 0.0709 0.528 CD8_Naive L2
ENSG00000120800 UTP20 292369 sc-eQTL 4.79e-01 -0.0537 0.0757 0.528 CD8_Naive L2
ENSG00000120805 ARL1 164702 sc-eQTL 9.50e-01 -0.00514 0.0823 0.528 CD8_Naive L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 5.73e-01 0.0306 0.0542 0.528 CD8_Naive L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 9.36e-01 -0.00673 0.0837 0.528 CD8_Naive L2
ENSG00000075188 NUP37 -547646 sc-eQTL 2.27e-01 0.102 0.0844 0.525 CD8_TCM L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.17e-01 0.119 0.0755 0.525 CD8_TCM L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 4.81e-01 0.0555 0.0785 0.525 CD8_TCM L2
ENSG00000120800 UTP20 292369 sc-eQTL 1.34e-01 0.128 0.0853 0.525 CD8_TCM L2
ENSG00000120805 ARL1 164702 sc-eQTL 1.61e-01 0.118 0.0838 0.525 CD8_TCM L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 9.51e-01 0.00463 0.0754 0.525 CD8_TCM L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 6.27e-01 -0.04 0.0822 0.525 CD8_TCM L2
ENSG00000075188 NUP37 -547646 sc-eQTL 4.83e-01 -0.0586 0.0833 0.53 CD8_TEM L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.16e-01 0.124 0.0784 0.53 CD8_TEM L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.58e-01 -0.119 0.0841 0.53 CD8_TEM L2
ENSG00000120800 UTP20 292369 sc-eQTL 4.38e-01 -0.0704 0.0905 0.53 CD8_TEM L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.64e-01 0.0261 0.0867 0.53 CD8_TEM L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 3.34e-01 0.0732 0.0756 0.53 CD8_TEM L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 6.84e-01 0.034 0.0835 0.53 CD8_TEM L2
ENSG00000017427 IGF1 -909270 sc-eQTL 8.65e-01 0.00502 0.0296 0.524 MAIT L2
ENSG00000075188 NUP37 -547646 sc-eQTL 8.95e-01 -0.011 0.083 0.524 MAIT L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 4.03e-01 0.0677 0.0808 0.524 MAIT L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 4.68e-01 0.0521 0.0716 0.524 MAIT L2
ENSG00000120800 UTP20 292369 sc-eQTL 9.19e-01 -0.00874 0.086 0.524 MAIT L2
ENSG00000120805 ARL1 164702 sc-eQTL 1.90e-01 0.115 0.0874 0.524 MAIT L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 6.55e-01 -0.0326 0.0729 0.524 MAIT L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.60e-01 0.0146 0.0827 0.524 MAIT L2
ENSG00000185480 PARPBP -547711 sc-eQTL 6.88e-02 -0.147 0.0804 0.524 MAIT L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 3.24e-01 0.0708 0.0716 0.524 MAIT L2
ENSG00000075188 NUP37 -547646 sc-eQTL 7.66e-01 0.0267 0.0897 0.533 NK_CD56bright L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.29e-01 0.0984 0.0645 0.533 NK_CD56bright L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.13e-02 0.189 0.0738 0.533 NK_CD56bright L2
ENSG00000120800 UTP20 292369 sc-eQTL 2.67e-01 0.0972 0.0873 0.533 NK_CD56bright L2
ENSG00000120805 ARL1 164702 sc-eQTL 6.76e-01 0.0358 0.0855 0.533 NK_CD56bright L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 6.64e-01 -0.0337 0.0773 0.533 NK_CD56bright L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.66e-01 0.0137 0.0814 0.533 NK_CD56bright L2
ENSG00000185480 PARPBP -547711 sc-eQTL 6.98e-01 -0.0333 0.0859 0.533 NK_CD56bright L2
ENSG00000075188 NUP37 -547646 sc-eQTL 2.94e-02 0.169 0.0772 0.528 NK_CD56dim L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.47e-01 0.0718 0.0762 0.528 NK_CD56dim L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 5.38e-01 0.0356 0.0577 0.528 NK_CD56dim L2
ENSG00000120800 UTP20 292369 sc-eQTL 6.91e-01 -0.0318 0.0801 0.528 NK_CD56dim L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.03e-01 0.0296 0.0775 0.528 NK_CD56dim L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 4.89e-01 -0.046 0.0663 0.528 NK_CD56dim L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 5.15e-01 -0.0525 0.0806 0.528 NK_CD56dim L2
ENSG00000185480 PARPBP -547711 sc-eQTL 8.19e-01 -0.0208 0.0908 0.528 NK_CD56dim L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.46e-01 -0.0495 0.0819 0.527 NK_HLA L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 8.58e-01 0.0151 0.0841 0.527 NK_HLA L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 2.78e-01 0.0732 0.0674 0.527 NK_HLA L2
ENSG00000120800 UTP20 292369 sc-eQTL 3.58e-01 0.0812 0.0882 0.527 NK_HLA L2
ENSG00000120805 ARL1 164702 sc-eQTL 9.15e-01 -0.00969 0.0903 0.527 NK_HLA L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 9.52e-01 0.00504 0.0838 0.527 NK_HLA L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 8.29e-01 0.0187 0.0862 0.527 NK_HLA L2
ENSG00000185480 PARPBP -547711 sc-eQTL 3.32e-01 0.0822 0.0845 0.527 NK_HLA L2
ENSG00000075188 NUP37 -547646 sc-eQTL 2.58e-01 -0.0901 0.0795 0.528 NK_cytokine L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.94e-01 0.0636 0.0745 0.528 NK_cytokine L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.87e-01 -0.049 0.0566 0.528 NK_cytokine L2
ENSG00000120800 UTP20 292369 sc-eQTL 7.66e-01 -0.0235 0.079 0.528 NK_cytokine L2
ENSG00000120805 ARL1 164702 sc-eQTL 5.78e-01 -0.0442 0.0794 0.528 NK_cytokine L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 7.38e-02 0.112 0.0621 0.528 NK_cytokine L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 6.03e-01 -0.0424 0.0815 0.528 NK_cytokine L2
ENSG00000185480 PARPBP -547711 sc-eQTL 6.29e-01 0.0426 0.088 0.528 NK_cytokine L2
ENSG00000017427 IGF1 -909270 sc-eQTL 3.07e-01 -0.0677 0.066 0.53 PB L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.83e-02 0.168 0.0879 0.53 PB L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 4.35e-01 0.0541 0.0691 0.53 PB L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 9.80e-01 -0.00251 0.0995 0.53 PB L2
ENSG00000120800 UTP20 292369 sc-eQTL 4.95e-01 0.0782 0.114 0.53 PB L2
ENSG00000120805 ARL1 164702 sc-eQTL 2.14e-01 0.0872 0.0698 0.53 PB L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.17e-01 -0.0188 0.0811 0.53 PB L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 9.45e-01 -0.00568 0.0823 0.53 PB L2
ENSG00000139351 SYCP3 -166998 sc-eQTL 2.38e-01 -0.113 0.095 0.53 PB L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.55e-02 0.21 0.0853 0.53 PB L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 1.14e-01 0.128 0.0801 0.53 PB L2
ENSG00000017427 IGF1 -909270 sc-eQTL 8.49e-01 0.00564 0.0297 0.526 Pro_T L2
ENSG00000075188 NUP37 -547646 sc-eQTL 8.82e-01 -0.0089 0.0598 0.526 Pro_T L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.60e-01 0.111 0.0789 0.526 Pro_T L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 6.46e-01 -0.027 0.0586 0.526 Pro_T L2
ENSG00000120800 UTP20 292369 sc-eQTL 7.13e-02 -0.151 0.0831 0.526 Pro_T L2
ENSG00000120805 ARL1 164702 sc-eQTL 9.92e-01 0.00061 0.0634 0.526 Pro_T L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 3.32e-01 0.0668 0.0687 0.526 Pro_T L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 2.37e-01 -0.0697 0.0589 0.526 Pro_T L2
ENSG00000185480 PARPBP -547711 sc-eQTL 1.76e-01 0.074 0.0545 0.526 Pro_T L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 5.68e-02 0.114 0.0593 0.526 Pro_T L2
ENSG00000075188 NUP37 -547646 sc-eQTL 3.73e-01 0.0738 0.0826 0.528 Treg L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 7.60e-02 0.152 0.0855 0.528 Treg L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.40e-01 0.0718 0.075 0.528 Treg L2
ENSG00000120800 UTP20 292369 sc-eQTL 4.78e-01 -0.0582 0.0818 0.528 Treg L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.44e-01 0.0277 0.0847 0.528 Treg L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.72e-01 0.0111 0.0688 0.528 Treg L2
ENSG00000075188 NUP37 -547646 sc-eQTL 9.98e-01 0.000231 0.077 0.539 cDC L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 9.87e-03 0.192 0.0737 0.539 cDC L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 2.15e-01 -0.12 0.0965 0.539 cDC L2
ENSG00000120800 UTP20 292369 sc-eQTL 2.02e-01 -0.112 0.0874 0.539 cDC L2
ENSG00000120805 ARL1 164702 sc-eQTL 6.41e-01 -0.0425 0.091 0.539 cDC L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.21e-03 0.259 0.0833 0.539 cDC L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 5.83e-01 -0.0366 0.0666 0.539 cDC L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 1.50e-01 -0.117 0.081 0.539 cDC L2
ENSG00000185480 PARPBP -547711 sc-eQTL 3.66e-01 -0.0687 0.0758 0.539 cDC L2
ENSG00000075188 NUP37 -547646 sc-eQTL 4.64e-01 -0.055 0.0751 0.528 cMono_IL1B L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 9.86e-01 -0.000994 0.0567 0.528 cMono_IL1B L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.97e-01 -0.0969 0.0749 0.528 cMono_IL1B L2
ENSG00000120800 UTP20 292369 sc-eQTL 3.89e-01 0.0728 0.0845 0.528 cMono_IL1B L2
ENSG00000120805 ARL1 164702 sc-eQTL 9.30e-01 -0.00665 0.0758 0.528 cMono_IL1B L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.28e-01 0.0788 0.0651 0.528 cMono_IL1B L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 5.52e-01 -0.0331 0.0557 0.528 cMono_IL1B L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 1.00e+00 -2.38e-05 0.061 0.528 cMono_IL1B L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.76e-01 -0.0452 0.0807 0.528 cMono_S100A L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 2.73e-01 -0.0678 0.0617 0.528 cMono_S100A L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.94e-01 -0.0642 0.0751 0.528 cMono_S100A L2
ENSG00000120800 UTP20 292369 sc-eQTL 5.46e-01 0.0533 0.0881 0.528 cMono_S100A L2
ENSG00000120805 ARL1 164702 sc-eQTL 9.40e-02 -0.138 0.0823 0.528 cMono_S100A L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 4.30e-01 0.0604 0.0765 0.528 cMono_S100A L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 3.57e-01 -0.055 0.0596 0.528 cMono_S100A L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 3.61e-01 -0.0683 0.0747 0.528 cMono_S100A L2
ENSG00000075188 NUP37 -547646 sc-eQTL 9.22e-01 -0.0106 0.108 0.515 gdT L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 7.22e-01 0.036 0.101 0.515 gdT L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 7.66e-01 -0.0227 0.0762 0.515 gdT L2
ENSG00000120800 UTP20 292369 sc-eQTL 2.10e-01 0.126 0.1 0.515 gdT L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.45e-02 0.188 0.104 0.515 gdT L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.97e-01 0.0128 0.0985 0.515 gdT L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.56e-01 0.0746 0.0999 0.515 gdT L2
ENSG00000185480 PARPBP -547711 sc-eQTL 3.35e-01 -0.0948 0.098 0.515 gdT L2
ENSG00000281344 HELLPAR -625111 sc-eQTL 6.17e-01 0.045 0.09 0.515 gdT L2
ENSG00000075188 NUP37 -547646 sc-eQTL 5.76e-02 0.156 0.0817 0.529 intMono L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 2.62e-01 0.0845 0.0752 0.529 intMono L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 7.69e-01 0.0261 0.0885 0.529 intMono L2
ENSG00000120800 UTP20 292369 sc-eQTL 6.43e-01 0.0384 0.0828 0.529 intMono L2
ENSG00000120805 ARL1 164702 sc-eQTL 8.77e-01 -0.0133 0.0858 0.529 intMono L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 4.45e-01 -0.0633 0.0828 0.529 intMono L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 1.26e-01 0.111 0.072 0.529 intMono L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 8.72e-01 0.0129 0.0802 0.529 intMono L2
ENSG00000075188 NUP37 -547646 sc-eQTL 6.00e-01 -0.0437 0.0831 0.536 ncMono L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.82e-01 0.102 0.0765 0.536 ncMono L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.49e-01 -0.133 0.0915 0.536 ncMono L2
ENSG00000120800 UTP20 292369 sc-eQTL 1.06e-01 -0.13 0.0799 0.536 ncMono L2
ENSG00000120805 ARL1 164702 sc-eQTL 7.23e-01 0.0274 0.0773 0.536 ncMono L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 7.45e-01 0.0242 0.0743 0.536 ncMono L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 6.28e-02 -0.128 0.0686 0.536 ncMono L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 2.35e-01 0.0855 0.0717 0.536 ncMono L2
ENSG00000075188 NUP37 -547646 sc-eQTL 4.80e-02 0.196 0.0983 0.554 pDC L2
ENSG00000111666 CHPT1 -124473 sc-eQTL 8.65e-01 -0.0148 0.0866 0.554 pDC L2
ENSG00000111670 GNPTAB -258485 sc-eQTL 3.48e-01 0.0861 0.0914 0.554 pDC L2
ENSG00000120800 UTP20 292369 sc-eQTL 7.75e-01 0.0261 0.0913 0.554 pDC L2
ENSG00000120805 ARL1 164702 sc-eQTL 4.12e-01 0.0788 0.0958 0.554 pDC L2
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.28e-02 -0.189 0.0823 0.554 pDC L2
ENSG00000136048 DRAM1 -305106 sc-eQTL 6.96e-01 0.0253 0.0647 0.554 pDC L2
ENSG00000139354 GAS2L3 998791 sc-eQTL 1.50e-01 -0.111 0.0768 0.554 pDC L2
ENSG00000185480 PARPBP -547711 sc-eQTL 3.22e-01 0.0852 0.0857 0.554 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -909270 sc-eQTL 5.00e-01 -0.0276 0.0409 0.528 B_Memory LOneK1K
ENSG00000075188 NUP37 -547646 sc-eQTL 6.72e-01 -0.0349 0.0822 0.528 B_Memory LOneK1K
ENSG00000111666 CHPT1 -124473 sc-eQTL 7.67e-01 -0.0129 0.0432 0.528 B_Memory LOneK1K
ENSG00000111670 GNPTAB -258485 sc-eQTL 7.62e-01 -0.0206 0.0679 0.528 B_Memory LOneK1K
ENSG00000120800 UTP20 292369 sc-eQTL 9.25e-02 0.117 0.0695 0.528 B_Memory LOneK1K
ENSG00000120805 ARL1 164702 sc-eQTL 7.27e-01 -0.0277 0.0791 0.528 B_Memory LOneK1K
ENSG00000120860 WASHC3 -489675 sc-eQTL 6.80e-01 0.0244 0.0591 0.528 B_Memory LOneK1K
ENSG00000136048 DRAM1 -305106 sc-eQTL 2.00e-01 0.0907 0.0705 0.528 B_Memory LOneK1K
ENSG00000139351 SYCP3 -166998 sc-eQTL 5.86e-01 -0.0445 0.0815 0.528 B_Memory LOneK1K
ENSG00000185480 PARPBP -547711 sc-eQTL 1.54e-01 0.122 0.085 0.528 B_Memory LOneK1K
ENSG00000281344 HELLPAR -625111 sc-eQTL 9.66e-01 -0.00357 0.0846 0.528 B_Memory LOneK1K
ENSG00000017427 IGF1 -909270 sc-eQTL 6.37e-01 0.0226 0.0478 0.528 B_Naive LOneK1K
ENSG00000075188 NUP37 -547646 sc-eQTL 9.04e-01 0.00942 0.0782 0.528 B_Naive LOneK1K
ENSG00000111666 CHPT1 -124473 sc-eQTL 3.58e-01 -0.0356 0.0386 0.528 B_Naive LOneK1K
ENSG00000111670 GNPTAB -258485 sc-eQTL 9.01e-01 0.0069 0.0553 0.528 B_Naive LOneK1K
ENSG00000120800 UTP20 292369 sc-eQTL 8.78e-01 -0.0104 0.0677 0.528 B_Naive LOneK1K
ENSG00000120805 ARL1 164702 sc-eQTL 1.00e-01 0.127 0.0768 0.528 B_Naive LOneK1K
ENSG00000120860 WASHC3 -489675 sc-eQTL 8.79e-02 0.0986 0.0575 0.528 B_Naive LOneK1K
ENSG00000136048 DRAM1 -305106 sc-eQTL 1.04e-01 0.0983 0.0603 0.528 B_Naive LOneK1K
ENSG00000139351 SYCP3 -166998 sc-eQTL 2.39e-02 0.197 0.0865 0.528 B_Naive LOneK1K
ENSG00000185480 PARPBP -547711 sc-eQTL 3.85e-01 0.0776 0.089 0.528 B_Naive LOneK1K
ENSG00000281344 HELLPAR -625111 sc-eQTL 9.61e-01 -0.00399 0.0812 0.528 B_Naive LOneK1K
ENSG00000075188 NUP37 -547646 sc-eQTL 5.76e-01 -0.0389 0.0694 0.528 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -124473 sc-eQTL 4.58e-01 -0.0417 0.056 0.528 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -258485 sc-eQTL 1.06e-01 -0.117 0.0718 0.528 CD14_Mono LOneK1K
ENSG00000120800 UTP20 292369 sc-eQTL 3.93e-01 0.0729 0.0852 0.528 CD14_Mono LOneK1K
ENSG00000120805 ARL1 164702 sc-eQTL 1.77e-01 -0.0985 0.0727 0.528 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -489675 sc-eQTL 2.04e-01 0.0807 0.0633 0.528 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.78e-01 -0.037 0.0521 0.528 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 998791 sc-eQTL 9.09e-01 -0.00684 0.0599 0.528 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -547646 sc-eQTL 4.60e-01 0.0591 0.0799 0.53 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -124473 sc-eQTL 1.75e-01 0.0945 0.0695 0.53 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -258485 sc-eQTL 6.98e-01 -0.0329 0.0845 0.53 CD16_Mono LOneK1K
ENSG00000120800 UTP20 292369 sc-eQTL 3.60e-01 -0.0744 0.0812 0.53 CD16_Mono LOneK1K
ENSG00000120805 ARL1 164702 sc-eQTL 4.64e-01 -0.0592 0.0807 0.53 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -489675 sc-eQTL 3.86e-01 0.0609 0.07 0.53 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -305106 sc-eQTL 7.28e-01 -0.0211 0.0605 0.53 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 998791 sc-eQTL 5.20e-01 0.0476 0.0737 0.53 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -547646 sc-eQTL 4.32e-01 0.0587 0.0745 0.528 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -124473 sc-eQTL 4.35e-01 0.0569 0.0727 0.528 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -258485 sc-eQTL 9.21e-01 0.00492 0.0498 0.528 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 292369 sc-eQTL 8.44e-01 0.0151 0.0765 0.528 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 164702 sc-eQTL 4.78e-01 -0.0504 0.0709 0.528 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -489675 sc-eQTL 6.29e-01 0.0278 0.0574 0.528 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -305106 sc-eQTL 4.41e-01 -0.0595 0.0771 0.528 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -547711 sc-eQTL 5.71e-01 0.0515 0.0907 0.528 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111670 GNPTAB -258485 eQTL 3.29e-02 0.0289 0.0135 0.00128 0.0 0.476
ENSG00000120805 ARL1 164702 eQTL 0.0263 0.0329 0.0148 0.00111 0.0 0.476
ENSG00000136048 DRAM1 -305106 eQTL 0.0346 -0.0291 0.0138 0.0 0.0 0.476
ENSG00000185480 PARPBP -547711 eQTL 0.031 0.0479 0.0222 0.0 0.0 0.476

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina