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Genes within 1Mb (chr12:101560597:TG:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -921147 sc-eQTL 7.11e-01 -0.018 0.0484 0.84 B L1
ENSG00000075188 NUP37 -559523 sc-eQTL 2.81e-02 0.184 0.0833 0.84 B L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.72e-01 0.0457 0.0511 0.84 B L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.01e-01 0.0388 0.0741 0.84 B L1
ENSG00000120800 UTP20 280492 sc-eQTL 6.53e-01 0.038 0.0842 0.84 B L1
ENSG00000120805 ARL1 152825 sc-eQTL 8.06e-01 0.0178 0.0724 0.84 B L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.32e-01 0.0693 0.0578 0.84 B L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.21e-01 0.0423 0.0657 0.84 B L1
ENSG00000139351 SYCP3 -178875 sc-eQTL 2.93e-01 0.11 0.104 0.84 B L1
ENSG00000185480 PARPBP -559588 sc-eQTL 1.39e-01 0.148 0.0995 0.84 B L1
ENSG00000281344 HELLPAR -636988 sc-eQTL 9.09e-01 0.0107 0.0933 0.84 B L1
ENSG00000075188 NUP37 -559523 sc-eQTL 8.22e-01 0.0176 0.078 0.84 CD4T L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.03e-01 0.171 0.105 0.84 CD4T L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 3.25e-01 0.072 0.0729 0.84 CD4T L1
ENSG00000120800 UTP20 280492 sc-eQTL 9.90e-01 0.000994 0.0808 0.84 CD4T L1
ENSG00000120805 ARL1 152825 sc-eQTL 6.85e-01 0.0321 0.079 0.84 CD4T L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 9.03e-01 -0.00675 0.0553 0.84 CD4T L1
ENSG00000075188 NUP37 -559523 sc-eQTL 1.27e-03 0.304 0.0931 0.84 CD8T L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 6.36e-01 0.049 0.103 0.84 CD8T L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 2.01e-01 0.0867 0.0676 0.84 CD8T L1
ENSG00000120800 UTP20 280492 sc-eQTL 4.40e-01 -0.0662 0.0856 0.84 CD8T L1
ENSG00000120805 ARL1 152825 sc-eQTL 8.38e-02 0.163 0.0939 0.84 CD8T L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 5.50e-02 0.128 0.0666 0.84 CD8T L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 7.99e-01 0.0245 0.0962 0.84 CD8T L1
ENSG00000075188 NUP37 -559523 sc-eQTL 6.27e-01 0.0519 0.107 0.84 DC L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.69e-01 0.108 0.0972 0.84 DC L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.15e-01 -0.0252 0.107 0.84 DC L1
ENSG00000120800 UTP20 280492 sc-eQTL 2.16e-01 -0.142 0.115 0.84 DC L1
ENSG00000120805 ARL1 152825 sc-eQTL 7.14e-01 0.0436 0.119 0.84 DC L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 3.97e-01 0.0868 0.102 0.84 DC L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.14e-01 -0.0552 0.0844 0.84 DC L1
ENSG00000139354 GAS2L3 986914 sc-eQTL 5.87e-02 -0.2 0.105 0.84 DC L1
ENSG00000185480 PARPBP -559588 sc-eQTL 7.62e-01 -0.0338 0.111 0.84 DC L1
ENSG00000075188 NUP37 -559523 sc-eQTL 2.67e-01 -0.101 0.0907 0.84 Mono L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.51e-01 0.0883 0.0767 0.84 Mono L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 2.79e-01 -0.104 0.0963 0.84 Mono L1
ENSG00000120800 UTP20 280492 sc-eQTL 9.60e-01 0.00547 0.108 0.84 Mono L1
ENSG00000120805 ARL1 152825 sc-eQTL 6.54e-01 -0.0445 0.099 0.84 Mono L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 3.81e-01 0.0763 0.087 0.84 Mono L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 3.20e-01 0.0706 0.0709 0.84 Mono L1
ENSG00000139354 GAS2L3 986914 sc-eQTL 4.53e-01 -0.058 0.0772 0.84 Mono L1
ENSG00000075188 NUP37 -559523 sc-eQTL 1.71e-01 -0.135 0.0983 0.839 NK L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 5.43e-01 0.0558 0.0915 0.839 NK L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.14e-01 -0.0336 0.0664 0.839 NK L1
ENSG00000120800 UTP20 280492 sc-eQTL 6.53e-01 -0.0481 0.107 0.839 NK L1
ENSG00000120805 ARL1 152825 sc-eQTL 9.75e-01 -0.00313 0.0982 0.839 NK L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 3.56e-01 -0.0683 0.0739 0.839 NK L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 4.83e-01 -0.0739 0.105 0.839 NK L1
ENSG00000185480 PARPBP -559588 sc-eQTL 2.84e-01 0.132 0.123 0.839 NK L1
ENSG00000017427 IGF1 -921147 sc-eQTL 9.20e-01 -0.0037 0.0367 0.84 Other_T L1
ENSG00000075188 NUP37 -559523 sc-eQTL 3.18e-01 -0.07 0.0698 0.84 Other_T L1
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.40e-01 0.151 0.102 0.84 Other_T L1
ENSG00000111670 GNPTAB -270362 sc-eQTL 3.76e-01 0.0653 0.0736 0.84 Other_T L1
ENSG00000120800 UTP20 280492 sc-eQTL 4.53e-01 -0.0865 0.115 0.84 Other_T L1
ENSG00000120805 ARL1 152825 sc-eQTL 1.42e-01 0.123 0.0836 0.84 Other_T L1
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.68e-01 -0.0827 0.0744 0.84 Other_T L1
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.72e-01 -0.0506 0.0895 0.84 Other_T L1
ENSG00000185480 PARPBP -559588 sc-eQTL 8.03e-01 -0.0186 0.0746 0.84 Other_T L1
ENSG00000281344 HELLPAR -636988 sc-eQTL 4.52e-01 0.0652 0.0866 0.84 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -921147 sc-eQTL 5.93e-01 -0.0121 0.0225 0.832 B_Activated L2
ENSG00000075188 NUP37 -559523 sc-eQTL 9.86e-01 0.00205 0.117 0.832 B_Activated L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.95e-01 0.0736 0.0863 0.832 B_Activated L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 4.43e-01 0.0942 0.123 0.832 B_Activated L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.70e-01 -0.0195 0.119 0.832 B_Activated L2
ENSG00000120805 ARL1 152825 sc-eQTL 6.94e-01 -0.0483 0.123 0.832 B_Activated L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 8.83e-01 0.0172 0.117 0.832 B_Activated L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 1.22e-02 -0.292 0.115 0.832 B_Activated L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 7.89e-01 -0.0259 0.0964 0.832 B_Activated L2
ENSG00000185480 PARPBP -559588 sc-eQTL 3.78e-01 0.0856 0.0968 0.832 B_Activated L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 5.18e-01 -0.0591 0.0911 0.832 B_Activated L2
ENSG00000017427 IGF1 -921147 sc-eQTL 6.83e-01 0.0198 0.0485 0.839 B_Intermediate L2
ENSG00000075188 NUP37 -559523 sc-eQTL 6.20e-01 0.0599 0.121 0.839 B_Intermediate L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.59e-01 0.0913 0.0646 0.839 B_Intermediate L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.85e-01 0.0139 0.0959 0.839 B_Intermediate L2
ENSG00000120800 UTP20 280492 sc-eQTL 9.24e-01 0.0102 0.107 0.839 B_Intermediate L2
ENSG00000120805 ARL1 152825 sc-eQTL 7.56e-01 -0.0373 0.12 0.839 B_Intermediate L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.13e-01 0.123 0.0987 0.839 B_Intermediate L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 2.12e-01 0.133 0.106 0.839 B_Intermediate L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 1.62e-01 -0.156 0.111 0.839 B_Intermediate L2
ENSG00000185480 PARPBP -559588 sc-eQTL 6.97e-01 0.0457 0.117 0.839 B_Intermediate L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 2.46e-01 0.131 0.112 0.839 B_Intermediate L2
ENSG00000017427 IGF1 -921147 sc-eQTL 7.86e-01 -0.012 0.044 0.838 B_Memory L2
ENSG00000075188 NUP37 -559523 sc-eQTL 1.96e-01 -0.15 0.116 0.838 B_Memory L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 9.01e-01 0.00949 0.0759 0.838 B_Memory L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 9.32e-01 -0.00889 0.104 0.838 B_Memory L2
ENSG00000120800 UTP20 280492 sc-eQTL 5.25e-01 0.0726 0.114 0.838 B_Memory L2
ENSG00000120805 ARL1 152825 sc-eQTL 4.32e-01 0.0893 0.113 0.838 B_Memory L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 1.94e-01 -0.132 0.101 0.838 B_Memory L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 3.37e-03 0.309 0.104 0.838 B_Memory L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 7.93e-01 0.0289 0.11 0.838 B_Memory L2
ENSG00000185480 PARPBP -559588 sc-eQTL 6.34e-01 0.0534 0.112 0.838 B_Memory L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 3.26e-01 -0.1 0.102 0.838 B_Memory L2
ENSG00000017427 IGF1 -921147 sc-eQTL 7.56e-01 0.0188 0.0605 0.84 B_Naive1 L2
ENSG00000075188 NUP37 -559523 sc-eQTL 2.11e-01 0.137 0.109 0.84 B_Naive1 L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 4.41e-01 0.0439 0.0569 0.84 B_Naive1 L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.59e-01 0.0356 0.0805 0.84 B_Naive1 L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.20e-01 -0.0217 0.0956 0.84 B_Naive1 L2
ENSG00000120805 ARL1 152825 sc-eQTL 2.45e-01 0.124 0.106 0.84 B_Naive1 L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 3.85e-01 0.0701 0.0806 0.84 B_Naive1 L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 3.42e-01 0.0832 0.0874 0.84 B_Naive1 L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 6.30e-01 0.0573 0.119 0.84 B_Naive1 L2
ENSG00000185480 PARPBP -559588 sc-eQTL 1.19e-01 0.18 0.115 0.84 B_Naive1 L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 4.28e-02 0.219 0.107 0.84 B_Naive1 L2
ENSG00000017427 IGF1 -921147 sc-eQTL 1.83e-01 0.0722 0.054 0.839 B_Naive2 L2
ENSG00000075188 NUP37 -559523 sc-eQTL 1.39e-01 0.164 0.111 0.839 B_Naive2 L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 5.56e-01 0.035 0.0595 0.839 B_Naive2 L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 2.82e-01 0.0993 0.092 0.839 B_Naive2 L2
ENSG00000120800 UTP20 280492 sc-eQTL 1.48e-01 0.155 0.106 0.839 B_Naive2 L2
ENSG00000120805 ARL1 152825 sc-eQTL 6.27e-01 -0.0571 0.117 0.839 B_Naive2 L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 3.75e-01 0.0907 0.102 0.839 B_Naive2 L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 9.24e-01 0.00962 0.101 0.839 B_Naive2 L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 1.32e-02 0.263 0.105 0.839 B_Naive2 L2
ENSG00000185480 PARPBP -559588 sc-eQTL 2.48e-01 0.142 0.123 0.839 B_Naive2 L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 5.21e-01 -0.068 0.106 0.839 B_Naive2 L2
ENSG00000075188 NUP37 -559523 sc-eQTL 3.72e-01 -0.105 0.117 0.843 CD4_CTL L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 5.18e-01 0.0761 0.117 0.843 CD4_CTL L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 1.33e-01 0.154 0.102 0.843 CD4_CTL L2
ENSG00000120800 UTP20 280492 sc-eQTL 9.05e-01 -0.0134 0.113 0.843 CD4_CTL L2
ENSG00000120805 ARL1 152825 sc-eQTL 8.84e-01 -0.0175 0.12 0.843 CD4_CTL L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 9.83e-01 -0.0024 0.115 0.843 CD4_CTL L2
ENSG00000075188 NUP37 -559523 sc-eQTL 4.22e-01 0.0726 0.0902 0.84 CD4_Naive L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.18e-01 0.163 0.104 0.84 CD4_Naive L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 5.21e-01 0.0516 0.0802 0.84 CD4_Naive L2
ENSG00000120800 UTP20 280492 sc-eQTL 3.55e-01 -0.081 0.0873 0.84 CD4_Naive L2
ENSG00000120805 ARL1 152825 sc-eQTL 6.84e-01 0.0387 0.0948 0.84 CD4_Naive L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 8.29e-01 0.0143 0.0662 0.84 CD4_Naive L2
ENSG00000075188 NUP37 -559523 sc-eQTL 9.88e-01 0.00142 0.0945 0.84 CD4_TCM L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.57e-01 0.154 0.108 0.84 CD4_TCM L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.79e-01 -0.0129 0.0843 0.84 CD4_TCM L2
ENSG00000120800 UTP20 280492 sc-eQTL 6.46e-01 -0.0485 0.105 0.84 CD4_TCM L2
ENSG00000120805 ARL1 152825 sc-eQTL 2.82e-01 0.106 0.0985 0.84 CD4_TCM L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 6.14e-01 0.0327 0.0648 0.84 CD4_TCM L2
ENSG00000075188 NUP37 -559523 sc-eQTL 6.68e-01 0.0468 0.109 0.84 CD4_TEM L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.27e-01 0.16 0.104 0.84 CD4_TEM L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 3.38e-01 -0.0968 0.101 0.84 CD4_TEM L2
ENSG00000120800 UTP20 280492 sc-eQTL 5.61e-03 0.3 0.107 0.84 CD4_TEM L2
ENSG00000120805 ARL1 152825 sc-eQTL 1.18e-01 -0.161 0.103 0.84 CD4_TEM L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.80e-01 0.1 0.0922 0.84 CD4_TEM L2
ENSG00000075188 NUP37 -559523 sc-eQTL 4.60e-01 0.0741 0.1 0.84 CD8_CTL L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 6.33e-01 0.0491 0.103 0.84 CD8_CTL L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 7.73e-01 -0.0238 0.0822 0.84 CD8_CTL L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.69e-01 0.0184 0.111 0.84 CD8_CTL L2
ENSG00000120805 ARL1 152825 sc-eQTL 4.72e-02 0.217 0.109 0.84 CD8_CTL L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 8.10e-01 0.0226 0.0938 0.84 CD8_CTL L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 3.80e-01 -0.102 0.116 0.84 CD8_CTL L2
ENSG00000075188 NUP37 -559523 sc-eQTL 2.14e-02 0.247 0.106 0.84 CD8_Naive L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.41e-01 0.102 0.107 0.84 CD8_Naive L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 1.40e-01 0.142 0.0957 0.84 CD8_Naive L2
ENSG00000120800 UTP20 280492 sc-eQTL 3.11e-01 -0.104 0.102 0.84 CD8_Naive L2
ENSG00000120805 ARL1 152825 sc-eQTL 8.43e-01 -0.022 0.111 0.84 CD8_Naive L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 4.07e-02 0.149 0.0724 0.84 CD8_Naive L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 8.88e-01 -0.016 0.113 0.84 CD8_Naive L2
ENSG00000075188 NUP37 -559523 sc-eQTL 8.09e-01 0.0283 0.117 0.838 CD8_TCM L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.02e-01 0.133 0.104 0.838 CD8_TCM L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 9.15e-02 0.182 0.107 0.838 CD8_TCM L2
ENSG00000120800 UTP20 280492 sc-eQTL 5.76e-01 -0.0661 0.118 0.838 CD8_TCM L2
ENSG00000120805 ARL1 152825 sc-eQTL 8.74e-01 0.0184 0.116 0.838 CD8_TCM L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 6.97e-01 0.0404 0.104 0.838 CD8_TCM L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 4.56e-02 0.225 0.112 0.838 CD8_TCM L2
ENSG00000075188 NUP37 -559523 sc-eQTL 7.59e-02 0.198 0.111 0.838 CD8_TEM L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 9.59e-01 0.00546 0.106 0.838 CD8_TEM L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 7.01e-01 0.0437 0.113 0.838 CD8_TEM L2
ENSG00000120800 UTP20 280492 sc-eQTL 9.32e-01 0.0104 0.122 0.838 CD8_TEM L2
ENSG00000120805 ARL1 152825 sc-eQTL 9.21e-01 0.0116 0.116 0.838 CD8_TEM L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.03e-01 0.13 0.101 0.838 CD8_TEM L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 2.21e-01 0.137 0.112 0.838 CD8_TEM L2
ENSG00000017427 IGF1 -921147 sc-eQTL 7.90e-01 0.0105 0.0395 0.838 MAIT L2
ENSG00000075188 NUP37 -559523 sc-eQTL 8.25e-01 -0.0246 0.111 0.838 MAIT L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 6.60e-01 0.0476 0.108 0.838 MAIT L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 2.40e-01 0.112 0.0953 0.838 MAIT L2
ENSG00000120800 UTP20 280492 sc-eQTL 2.97e-01 -0.119 0.114 0.838 MAIT L2
ENSG00000120805 ARL1 152825 sc-eQTL 4.21e-02 0.237 0.116 0.838 MAIT L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 4.99e-01 -0.0658 0.0971 0.838 MAIT L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.24e-01 -0.0703 0.11 0.838 MAIT L2
ENSG00000185480 PARPBP -559588 sc-eQTL 1.78e-02 -0.255 0.107 0.838 MAIT L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 3.93e-01 0.0817 0.0955 0.838 MAIT L2
ENSG00000075188 NUP37 -559523 sc-eQTL 5.53e-01 0.0734 0.123 0.844 NK_CD56bright L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 4.57e-02 0.178 0.0884 0.844 NK_CD56bright L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.39e-02 0.178 0.102 0.844 NK_CD56bright L2
ENSG00000120800 UTP20 280492 sc-eQTL 5.98e-02 0.226 0.119 0.844 NK_CD56bright L2
ENSG00000120805 ARL1 152825 sc-eQTL 8.07e-01 0.0288 0.118 0.844 NK_CD56bright L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 8.15e-01 -0.0249 0.106 0.844 NK_CD56bright L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 1.04e-01 -0.182 0.111 0.844 NK_CD56bright L2
ENSG00000185480 PARPBP -559588 sc-eQTL 1.35e-01 -0.177 0.118 0.844 NK_CD56bright L2
ENSG00000075188 NUP37 -559523 sc-eQTL 9.34e-01 0.0091 0.11 0.838 NK_CD56dim L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.28e-01 0.105 0.107 0.838 NK_CD56dim L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.75e-01 -0.0342 0.0813 0.838 NK_CD56dim L2
ENSG00000120800 UTP20 280492 sc-eQTL 3.45e-01 -0.107 0.113 0.838 NK_CD56dim L2
ENSG00000120805 ARL1 152825 sc-eQTL 6.87e-01 0.0441 0.109 0.838 NK_CD56dim L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 5.59e-02 -0.178 0.0928 0.838 NK_CD56dim L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 4.79e-01 -0.0806 0.114 0.838 NK_CD56dim L2
ENSG00000185480 PARPBP -559588 sc-eQTL 5.03e-01 0.0857 0.128 0.838 NK_CD56dim L2
ENSG00000075188 NUP37 -559523 sc-eQTL 7.27e-01 -0.0403 0.115 0.84 NK_HLA L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.17e-01 -0.146 0.118 0.84 NK_HLA L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 9.30e-01 -0.0084 0.095 0.84 NK_HLA L2
ENSG00000120800 UTP20 280492 sc-eQTL 3.51e-01 0.116 0.124 0.84 NK_HLA L2
ENSG00000120805 ARL1 152825 sc-eQTL 6.21e-01 -0.0628 0.127 0.84 NK_HLA L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 9.22e-01 -0.0116 0.118 0.84 NK_HLA L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 7.08e-01 0.0455 0.121 0.84 NK_HLA L2
ENSG00000185480 PARPBP -559588 sc-eQTL 6.70e-01 0.0508 0.119 0.84 NK_HLA L2
ENSG00000075188 NUP37 -559523 sc-eQTL 8.44e-02 -0.189 0.109 0.838 NK_cytokine L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 9.14e-01 -0.011 0.103 0.838 NK_cytokine L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.11e-02 -0.146 0.0773 0.838 NK_cytokine L2
ENSG00000120800 UTP20 280492 sc-eQTL 7.70e-01 -0.0319 0.109 0.838 NK_cytokine L2
ENSG00000120805 ARL1 152825 sc-eQTL 2.79e-01 0.119 0.109 0.838 NK_cytokine L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 4.53e-01 0.0647 0.0861 0.838 NK_cytokine L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 9.51e-01 0.00687 0.112 0.838 NK_cytokine L2
ENSG00000185480 PARPBP -559588 sc-eQTL 4.18e-01 0.0983 0.121 0.838 NK_cytokine L2
ENSG00000017427 IGF1 -921147 sc-eQTL 2.45e-01 0.106 0.091 0.837 PB L2
ENSG00000075188 NUP37 -559523 sc-eQTL 1.77e-01 0.166 0.122 0.837 PB L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 9.97e-03 0.243 0.0928 0.837 PB L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 7.58e-01 0.0424 0.137 0.837 PB L2
ENSG00000120800 UTP20 280492 sc-eQTL 1.07e-01 0.253 0.156 0.837 PB L2
ENSG00000120805 ARL1 152825 sc-eQTL 9.94e-01 -0.00076 0.097 0.837 PB L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 7.11e-01 -0.0415 0.112 0.837 PB L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 8.12e-02 -0.197 0.112 0.837 PB L2
ENSG00000139351 SYCP3 -178875 sc-eQTL 1.01e-01 -0.215 0.13 0.837 PB L2
ENSG00000185480 PARPBP -559588 sc-eQTL 2.88e-01 0.128 0.12 0.837 PB L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 5.10e-01 0.0738 0.112 0.837 PB L2
ENSG00000017427 IGF1 -921147 sc-eQTL 6.70e-01 0.0178 0.0417 0.841 Pro_T L2
ENSG00000075188 NUP37 -559523 sc-eQTL 3.01e-01 0.087 0.0838 0.841 Pro_T L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.23e-01 0.11 0.111 0.841 Pro_T L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.03e-02 0.144 0.0818 0.841 Pro_T L2
ENSG00000120800 UTP20 280492 sc-eQTL 1.49e-01 -0.17 0.117 0.841 Pro_T L2
ENSG00000120805 ARL1 152825 sc-eQTL 9.78e-01 -0.0024 0.089 0.841 Pro_T L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 5.19e-01 0.0625 0.0967 0.841 Pro_T L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 6.42e-01 -0.0386 0.0829 0.841 Pro_T L2
ENSG00000185480 PARPBP -559588 sc-eQTL 3.98e-01 0.065 0.0767 0.841 Pro_T L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 7.32e-01 -0.0288 0.0841 0.841 Pro_T L2
ENSG00000075188 NUP37 -559523 sc-eQTL 3.74e-01 -0.1 0.112 0.84 Treg L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 5.36e-02 0.225 0.116 0.84 Treg L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 1.42e-01 0.15 0.102 0.84 Treg L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.74e-01 -0.0178 0.112 0.84 Treg L2
ENSG00000120805 ARL1 152825 sc-eQTL 3.56e-01 0.106 0.115 0.84 Treg L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 8.81e-01 -0.0141 0.0937 0.84 Treg L2
ENSG00000075188 NUP37 -559523 sc-eQTL 9.41e-01 -0.0077 0.103 0.839 cDC L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.45e-01 0.117 0.1 0.839 cDC L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 5.94e-01 -0.0694 0.13 0.839 cDC L2
ENSG00000120800 UTP20 280492 sc-eQTL 4.03e-01 -0.0987 0.118 0.839 cDC L2
ENSG00000120805 ARL1 152825 sc-eQTL 2.18e-01 -0.151 0.122 0.839 cDC L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 6.15e-02 0.214 0.114 0.839 cDC L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 1.86e-01 -0.118 0.0891 0.839 cDC L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 2.65e-02 -0.241 0.108 0.839 cDC L2
ENSG00000185480 PARPBP -559588 sc-eQTL 1.13e-01 -0.162 0.101 0.839 cDC L2
ENSG00000075188 NUP37 -559523 sc-eQTL 5.20e-01 -0.066 0.103 0.84 cMono_IL1B L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 5.73e-02 0.147 0.0767 0.84 cMono_IL1B L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.85e-01 0.0149 0.103 0.84 cMono_IL1B L2
ENSG00000120800 UTP20 280492 sc-eQTL 6.84e-01 0.047 0.115 0.84 cMono_IL1B L2
ENSG00000120805 ARL1 152825 sc-eQTL 9.10e-01 0.0117 0.103 0.84 cMono_IL1B L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 9.55e-01 0.00504 0.0892 0.84 cMono_IL1B L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 4.58e-01 0.0565 0.076 0.84 cMono_IL1B L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 8.13e-01 -0.0197 0.0832 0.84 cMono_IL1B L2
ENSG00000075188 NUP37 -559523 sc-eQTL 1.53e-01 -0.158 0.11 0.84 cMono_S100A L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 9.26e-01 0.00788 0.0847 0.84 cMono_S100A L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 7.59e-02 -0.182 0.102 0.84 cMono_S100A L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.76e-01 0.0188 0.121 0.84 cMono_S100A L2
ENSG00000120805 ARL1 152825 sc-eQTL 4.65e-01 -0.0829 0.113 0.84 cMono_S100A L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 5.16e-01 0.0682 0.105 0.84 cMono_S100A L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 9.56e-01 -0.00447 0.0818 0.84 cMono_S100A L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 6.69e-02 -0.187 0.102 0.84 cMono_S100A L2
ENSG00000075188 NUP37 -559523 sc-eQTL 6.51e-01 0.0652 0.144 0.842 gdT L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.99e-01 0.173 0.134 0.842 gdT L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 5.37e-01 0.0629 0.102 0.842 gdT L2
ENSG00000120800 UTP20 280492 sc-eQTL 5.64e-01 0.0776 0.134 0.842 gdT L2
ENSG00000120805 ARL1 152825 sc-eQTL 4.14e-01 0.115 0.141 0.842 gdT L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 7.35e-01 -0.0445 0.131 0.842 gdT L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.54e-01 0.0791 0.133 0.842 gdT L2
ENSG00000185480 PARPBP -559588 sc-eQTL 8.94e-01 0.0175 0.131 0.842 gdT L2
ENSG00000281344 HELLPAR -636988 sc-eQTL 9.25e-01 0.0113 0.12 0.842 gdT L2
ENSG00000075188 NUP37 -559523 sc-eQTL 7.48e-01 0.0361 0.112 0.836 intMono L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 4.62e-01 -0.0755 0.102 0.836 intMono L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 6.98e-01 0.0468 0.12 0.836 intMono L2
ENSG00000120800 UTP20 280492 sc-eQTL 8.90e-01 -0.0157 0.113 0.836 intMono L2
ENSG00000120805 ARL1 152825 sc-eQTL 8.76e-01 -0.0183 0.117 0.836 intMono L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 6.64e-01 -0.049 0.113 0.836 intMono L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 6.35e-01 0.0468 0.0985 0.836 intMono L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 6.30e-01 0.0526 0.109 0.836 intMono L2
ENSG00000075188 NUP37 -559523 sc-eQTL 8.07e-01 -0.027 0.111 0.846 ncMono L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.18e-02 0.218 0.101 0.846 ncMono L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 3.87e-01 -0.106 0.122 0.846 ncMono L2
ENSG00000120800 UTP20 280492 sc-eQTL 9.33e-01 0.00897 0.107 0.846 ncMono L2
ENSG00000120805 ARL1 152825 sc-eQTL 5.29e-01 0.0648 0.103 0.846 ncMono L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 6.57e-02 0.182 0.0981 0.846 ncMono L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 2.61e-01 -0.104 0.0918 0.846 ncMono L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 6.95e-01 -0.0376 0.0957 0.846 ncMono L2
ENSG00000075188 NUP37 -559523 sc-eQTL 1.16e-01 0.198 0.126 0.833 pDC L2
ENSG00000111666 CHPT1 -136350 sc-eQTL 8.88e-01 0.0156 0.11 0.833 pDC L2
ENSG00000111670 GNPTAB -270362 sc-eQTL 1.44e-01 0.17 0.116 0.833 pDC L2
ENSG00000120800 UTP20 280492 sc-eQTL 1.99e-01 -0.149 0.116 0.833 pDC L2
ENSG00000120805 ARL1 152825 sc-eQTL 3.96e-01 0.104 0.122 0.833 pDC L2
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.62e-01 -0.119 0.106 0.833 pDC L2
ENSG00000136048 DRAM1 -316983 sc-eQTL 4.73e-01 -0.0593 0.0823 0.833 pDC L2
ENSG00000139354 GAS2L3 986914 sc-eQTL 8.30e-01 0.0211 0.0984 0.833 pDC L2
ENSG00000185480 PARPBP -559588 sc-eQTL 6.56e-01 0.0489 0.109 0.833 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -921147 sc-eQTL 8.15e-01 -0.0132 0.0564 0.84 B_Memory LOneK1K
ENSG00000075188 NUP37 -559523 sc-eQTL 2.35e-01 -0.135 0.113 0.84 B_Memory LOneK1K
ENSG00000111666 CHPT1 -136350 sc-eQTL 1.77e-01 0.0805 0.0594 0.84 B_Memory LOneK1K
ENSG00000111670 GNPTAB -270362 sc-eQTL 9.41e-01 -0.00691 0.0937 0.84 B_Memory LOneK1K
ENSG00000120800 UTP20 280492 sc-eQTL 3.76e-01 0.0855 0.0963 0.84 B_Memory LOneK1K
ENSG00000120805 ARL1 152825 sc-eQTL 8.84e-01 -0.016 0.109 0.84 B_Memory LOneK1K
ENSG00000120860 WASHC3 -501552 sc-eQTL 7.37e-01 -0.0274 0.0815 0.84 B_Memory LOneK1K
ENSG00000136048 DRAM1 -316983 sc-eQTL 2.79e-01 0.106 0.0973 0.84 B_Memory LOneK1K
ENSG00000139351 SYCP3 -178875 sc-eQTL 4.18e-01 -0.0911 0.112 0.84 B_Memory LOneK1K
ENSG00000185480 PARPBP -559588 sc-eQTL 8.29e-01 0.0254 0.118 0.84 B_Memory LOneK1K
ENSG00000281344 HELLPAR -636988 sc-eQTL 8.64e-01 -0.0199 0.117 0.84 B_Memory LOneK1K
ENSG00000017427 IGF1 -921147 sc-eQTL 6.49e-01 0.0296 0.065 0.84 B_Naive LOneK1K
ENSG00000075188 NUP37 -559523 sc-eQTL 3.92e-02 0.218 0.105 0.84 B_Naive LOneK1K
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.32e-01 0.0627 0.0523 0.84 B_Naive LOneK1K
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.06e-01 0.0185 0.0752 0.84 B_Naive LOneK1K
ENSG00000120800 UTP20 280492 sc-eQTL 5.65e-01 0.0531 0.092 0.84 B_Naive LOneK1K
ENSG00000120805 ARL1 152825 sc-eQTL 5.02e-01 0.0706 0.105 0.84 B_Naive LOneK1K
ENSG00000120860 WASHC3 -501552 sc-eQTL 1.94e-01 0.102 0.0783 0.84 B_Naive LOneK1K
ENSG00000136048 DRAM1 -316983 sc-eQTL 3.81e-01 0.0722 0.0823 0.84 B_Naive LOneK1K
ENSG00000139351 SYCP3 -178875 sc-eQTL 1.94e-01 0.155 0.119 0.84 B_Naive LOneK1K
ENSG00000185480 PARPBP -559588 sc-eQTL 1.35e-01 0.181 0.121 0.84 B_Naive LOneK1K
ENSG00000281344 HELLPAR -636988 sc-eQTL 4.28e-01 0.0874 0.11 0.84 B_Naive LOneK1K
ENSG00000075188 NUP37 -559523 sc-eQTL 2.83e-01 -0.102 0.0944 0.84 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -136350 sc-eQTL 2.19e-01 0.094 0.0763 0.84 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -270362 sc-eQTL 1.83e-01 -0.131 0.0981 0.84 CD14_Mono LOneK1K
ENSG00000120800 UTP20 280492 sc-eQTL 8.79e-01 0.0178 0.116 0.84 CD14_Mono LOneK1K
ENSG00000120805 ARL1 152825 sc-eQTL 5.63e-01 -0.0577 0.0996 0.84 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -501552 sc-eQTL 7.89e-01 0.0233 0.0867 0.84 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -316983 sc-eQTL 2.46e-01 0.0825 0.0709 0.84 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 986914 sc-eQTL 3.09e-01 -0.0831 0.0815 0.84 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -559523 sc-eQTL 9.20e-01 -0.0109 0.108 0.838 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -136350 sc-eQTL 3.21e-01 0.0938 0.0943 0.838 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -270362 sc-eQTL 8.76e-01 -0.0178 0.114 0.838 CD16_Mono LOneK1K
ENSG00000120800 UTP20 280492 sc-eQTL 8.82e-01 -0.0164 0.11 0.838 CD16_Mono LOneK1K
ENSG00000120805 ARL1 152825 sc-eQTL 1.00e+00 8.71e-06 0.109 0.838 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -501552 sc-eQTL 1.26e-01 0.145 0.0944 0.838 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -316983 sc-eQTL 9.02e-01 0.0101 0.0819 0.838 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 986914 sc-eQTL 9.19e-01 -0.0102 0.0999 0.838 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -559523 sc-eQTL 1.85e-01 -0.138 0.104 0.838 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -136350 sc-eQTL 7.30e-01 0.0351 0.102 0.838 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -270362 sc-eQTL 4.10e-01 -0.0574 0.0695 0.838 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 280492 sc-eQTL 2.72e-01 -0.117 0.107 0.838 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 152825 sc-eQTL 9.80e-01 -0.00249 0.0991 0.838 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -501552 sc-eQTL 2.83e-01 -0.0862 0.0801 0.838 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -316983 sc-eQTL 5.27e-01 -0.0683 0.108 0.838 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -559588 sc-eQTL 2.85e-01 0.136 0.127 0.838 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -136350 eQTL 1.66e-03 0.11 0.0348 0.0 0.0 0.142

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina