logo

Genes within 1Mb (chr12:100977125:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 778003 sc-eQTL 2.01e-01 0.288 0.225 0.054 B_Activated L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 7.65e-02 -0.426 0.239 0.054 B_Activated L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 3.90e-01 0.135 0.157 0.054 B_Activated L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 3.73e-01 -0.199 0.222 0.054 B_Activated L2
ENSG00000120800 UTP20 -302980 sc-eQTL 1.06e-01 0.348 0.214 0.054 B_Activated L2
ENSG00000120805 ARL1 -430647 sc-eQTL 8.14e-01 0.0526 0.223 0.054 B_Activated L2
ENSG00000136021 SCYL2 709985 sc-eQTL 5.86e-01 -0.124 0.227 0.054 B_Activated L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 1.00e+00 -2.59e-05 0.213 0.054 B_Activated L2
ENSG00000139351 SYCP3 -762347 sc-eQTL 1.99e-01 0.225 0.174 0.054 B_Activated L2
ENSG00000075089 ACTR6 778003 sc-eQTL 9.52e-02 -0.333 0.199 0.05 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 9.03e-02 -0.363 0.213 0.05 CD8_TEM L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 5.20e-01 -0.124 0.192 0.05 CD8_TEM L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 4.75e-01 -0.147 0.206 0.05 CD8_TEM L2
ENSG00000120800 UTP20 -302980 sc-eQTL 8.16e-01 -0.0514 0.221 0.05 CD8_TEM L2
ENSG00000120805 ARL1 -430647 sc-eQTL 9.04e-01 0.0254 0.211 0.05 CD8_TEM L2
ENSG00000136021 SCYL2 709985 sc-eQTL 4.50e-01 0.166 0.219 0.05 CD8_TEM L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 9.77e-01 -0.00583 0.204 0.05 CD8_TEM L2
ENSG00000075089 ACTR6 778003 sc-eQTL 6.61e-01 0.0858 0.195 0.051 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 4.53e-01 0.14 0.187 0.051 NK_CD56bright L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 6.92e-02 0.275 0.151 0.051 NK_CD56bright L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 1.85e-02 -0.411 0.173 0.051 NK_CD56bright L2
ENSG00000120800 UTP20 -302980 sc-eQTL 9.79e-01 0.00548 0.205 0.051 NK_CD56bright L2
ENSG00000120805 ARL1 -430647 sc-eQTL 5.61e-01 -0.116 0.2 0.051 NK_CD56bright L2
ENSG00000136021 SCYL2 709985 sc-eQTL 9.68e-01 -0.00749 0.188 0.051 NK_CD56bright L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 2.00e-01 -0.244 0.19 0.051 NK_CD56bright L2
ENSG00000075089 ACTR6 778003 sc-eQTL 4.82e-01 -0.146 0.207 0.05 NK_HLA L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 5.75e-01 -0.117 0.209 0.05 NK_HLA L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 2.94e-01 0.211 0.201 0.05 NK_HLA L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 6.57e-01 -0.0719 0.162 0.05 NK_HLA L2
ENSG00000120800 UTP20 -302980 sc-eQTL 3.21e-01 -0.21 0.211 0.05 NK_HLA L2
ENSG00000120805 ARL1 -430647 sc-eQTL 9.49e-01 -0.0139 0.216 0.05 NK_HLA L2
ENSG00000136021 SCYL2 709985 sc-eQTL 2.85e-01 -0.228 0.213 0.05 NK_HLA L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 3.02e-01 -0.213 0.206 0.05 NK_HLA L2
ENSG00000075089 ACTR6 778003 sc-eQTL 8.72e-01 -0.0393 0.244 0.056 PB L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 3.29e-01 -0.229 0.234 0.056 PB L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 5.15e-02 -0.28 0.142 0.056 PB L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 2.78e-01 0.225 0.207 0.056 PB L2
ENSG00000120800 UTP20 -302980 sc-eQTL 7.29e-01 -0.083 0.239 0.056 PB L2
ENSG00000120805 ARL1 -430647 sc-eQTL 2.89e-01 -0.156 0.146 0.056 PB L2
ENSG00000136021 SCYL2 709985 sc-eQTL 8.05e-01 -0.0617 0.25 0.056 PB L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 8.90e-01 -0.0238 0.172 0.056 PB L2
ENSG00000139351 SYCP3 -762347 sc-eQTL 5.47e-01 0.121 0.199 0.056 PB L2
ENSG00000075089 ACTR6 778003 sc-eQTL 1.07e-01 0.328 0.203 0.05 Pro_T L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 1.93e-01 -0.264 0.202 0.05 Pro_T L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 7.46e-02 -0.331 0.185 0.05 Pro_T L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 2.02e-01 0.175 0.137 0.05 Pro_T L2
ENSG00000120800 UTP20 -302980 sc-eQTL 3.83e-01 0.172 0.196 0.05 Pro_T L2
ENSG00000120805 ARL1 -430647 sc-eQTL 5.51e-03 -0.41 0.146 0.05 Pro_T L2
ENSG00000136021 SCYL2 709985 sc-eQTL 6.53e-01 -0.0893 0.198 0.05 Pro_T L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 6.87e-01 -0.0559 0.139 0.05 Pro_T L2
ENSG00000075089 ACTR6 778003 sc-eQTL 7.18e-02 -0.363 0.2 0.051 pDC L2
ENSG00000111647 UHRF1BP1L 834251 sc-eQTL 5.42e-01 -0.119 0.195 0.051 pDC L2
ENSG00000111666 CHPT1 -719822 sc-eQTL 5.10e-01 0.127 0.193 0.051 pDC L2
ENSG00000111670 GNPTAB -853834 sc-eQTL 7.93e-01 -0.0536 0.204 0.051 pDC L2
ENSG00000120800 UTP20 -302980 sc-eQTL 2.49e-02 0.453 0.2 0.051 pDC L2
ENSG00000120805 ARL1 -430647 sc-eQTL 2.26e-01 -0.258 0.213 0.051 pDC L2
ENSG00000136021 SCYL2 709985 sc-eQTL 2.76e-01 -0.231 0.212 0.051 pDC L2
ENSG00000136048 DRAM1 -900455 sc-eQTL 3.14e-01 -0.145 0.144 0.051 pDC L2
ENSG00000139354 GAS2L3 403442 sc-eQTL 5.81e-01 0.0951 0.172 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000258230 AC063950.1 -796630 eQTL 0.0322 -0.131 0.0613 0.0 0.0 0.051

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111670 \N -853834 2.67e-07 1.16e-07 3.69e-08 1.84e-07 9.01e-08 9.65e-08 1.44e-07 5.37e-08 1.41e-07 4.57e-08 1.56e-07 8.36e-08 1.41e-07 6.38e-08 6e-08 7.17e-08 3.98e-08 1.21e-07 5.36e-08 4.42e-08 1.04e-07 1.23e-07 1.34e-07 3.79e-08 1.32e-07 1.16e-07 1.08e-07 9.32e-08 1.05e-07 1.1e-07 9.91e-08 3.87e-08 3.16e-08 8.55e-08 8.38e-08 3.62e-08 5.03e-08 9.22e-08 6.56e-08 3.98e-08 3.57e-08 1.35e-07 4.33e-08 2.1e-08 5.75e-08 1.83e-08 1.19e-07 3.81e-09 4.94e-08