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Genes within 1Mb (chr12:100873333:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674211 sc-eQTL 4.96e-02 -0.145 0.0732 0.365 B L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.92e-01 -0.00848 0.0627 0.365 B L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.54e-01 -0.023 0.0389 0.365 B L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 8.08e-01 0.0137 0.0563 0.365 B L1
ENSG00000120800 UTP20 -406772 sc-eQTL 1.48e-01 0.0924 0.0637 0.365 B L1
ENSG00000120805 ARL1 -534439 sc-eQTL 3.75e-01 0.0488 0.0549 0.365 B L1
ENSG00000136021 SCYL2 606193 sc-eQTL 4.12e-01 0.0512 0.0624 0.365 B L1
ENSG00000139351 SYCP3 -866139 sc-eQTL 3.45e-01 0.0749 0.0791 0.365 B L1
ENSG00000075089 ACTR6 674211 sc-eQTL 5.18e-01 -0.0367 0.0567 0.365 CD4T L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 4.12e-01 -0.0434 0.0528 0.365 CD4T L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.06e-01 -0.0809 0.0788 0.365 CD4T L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 8.78e-01 -0.00843 0.0548 0.365 CD4T L1
ENSG00000120800 UTP20 -406772 sc-eQTL 4.51e-01 0.0457 0.0605 0.365 CD4T L1
ENSG00000120805 ARL1 -534439 sc-eQTL 6.16e-01 0.0297 0.0592 0.365 CD4T L1
ENSG00000136021 SCYL2 606193 sc-eQTL 4.15e-02 -0.0918 0.0448 0.365 CD4T L1
ENSG00000075089 ACTR6 674211 sc-eQTL 9.06e-01 -0.00741 0.063 0.365 CD8T L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 4.38e-01 0.0484 0.0623 0.365 CD8T L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.60e-01 -0.0139 0.0788 0.365 CD8T L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.38e-01 0.0173 0.0517 0.365 CD8T L1
ENSG00000120800 UTP20 -406772 sc-eQTL 4.06e-01 0.0542 0.0652 0.365 CD8T L1
ENSG00000120805 ARL1 -534439 sc-eQTL 4.32e-02 -0.145 0.0713 0.365 CD8T L1
ENSG00000136021 SCYL2 606193 sc-eQTL 6.40e-01 -0.0273 0.0584 0.365 CD8T L1
ENSG00000075089 ACTR6 674211 sc-eQTL 5.18e-01 0.0528 0.0816 0.369 DC L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.03e-01 -0.0301 0.0788 0.369 DC L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 4.33e-01 -0.0585 0.0744 0.369 DC L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.22e-01 -0.0658 0.0818 0.369 DC L1
ENSG00000120800 UTP20 -406772 sc-eQTL 7.13e-01 0.0324 0.0878 0.369 DC L1
ENSG00000120805 ARL1 -534439 sc-eQTL 6.08e-02 0.17 0.0901 0.369 DC L1
ENSG00000136021 SCYL2 606193 sc-eQTL 6.22e-01 0.0432 0.0873 0.369 DC L1
ENSG00000139354 GAS2L3 299650 sc-eQTL 8.04e-02 -0.142 0.0806 0.369 DC L1
ENSG00000075089 ACTR6 674211 sc-eQTL 9.91e-01 0.000797 0.0722 0.365 Mono L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.70e-01 -0.0654 0.0592 0.365 Mono L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.24e-01 -0.0129 0.0577 0.365 Mono L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 9.56e-01 0.00403 0.0723 0.365 Mono L1
ENSG00000120800 UTP20 -406772 sc-eQTL 4.11e-02 0.164 0.0799 0.365 Mono L1
ENSG00000120805 ARL1 -534439 sc-eQTL 5.36e-01 -0.046 0.0742 0.365 Mono L1
ENSG00000136021 SCYL2 606193 sc-eQTL 1.72e-01 0.0845 0.0616 0.365 Mono L1
ENSG00000139354 GAS2L3 299650 sc-eQTL 3.53e-01 0.0538 0.0578 0.365 Mono L1
ENSG00000075089 ACTR6 674211 sc-eQTL 5.60e-01 -0.0392 0.067 0.363 NK L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.64e-01 0.00947 0.0553 0.363 NK L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.46e-01 -0.0417 0.0689 0.363 NK L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.34e-01 0.0239 0.05 0.363 NK L1
ENSG00000120800 UTP20 -406772 sc-eQTL 2.54e-01 0.0917 0.0802 0.363 NK L1
ENSG00000120805 ARL1 -534439 sc-eQTL 1.16e-01 -0.116 0.0735 0.363 NK L1
ENSG00000136021 SCYL2 606193 sc-eQTL 6.03e-01 -0.0297 0.0569 0.363 NK L1
ENSG00000075089 ACTR6 674211 sc-eQTL 9.27e-01 -0.00731 0.0795 0.365 Other_T L1
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 5.16e-01 -0.0491 0.0754 0.365 Other_T L1
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.20e-01 -0.0771 0.0773 0.365 Other_T L1
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.67e-01 0.0407 0.0559 0.365 Other_T L1
ENSG00000120800 UTP20 -406772 sc-eQTL 6.41e-01 -0.0408 0.0873 0.365 Other_T L1
ENSG00000120805 ARL1 -534439 sc-eQTL 1.34e-01 -0.0953 0.0633 0.365 Other_T L1
ENSG00000136021 SCYL2 606193 sc-eQTL 6.86e-01 -0.0281 0.0695 0.365 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674211 sc-eQTL 3.39e-01 -0.0935 0.0976 0.385 B_Activated L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.12e-01 -0.0249 0.105 0.385 B_Activated L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.23e-01 0.0153 0.068 0.385 B_Activated L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 3.68e-01 -0.0869 0.0963 0.385 B_Activated L2
ENSG00000120800 UTP20 -406772 sc-eQTL 1.64e-01 0.13 0.0929 0.385 B_Activated L2
ENSG00000120805 ARL1 -534439 sc-eQTL 3.71e-01 0.0863 0.0963 0.385 B_Activated L2
ENSG00000136021 SCYL2 606193 sc-eQTL 8.09e-01 0.0239 0.0983 0.385 B_Activated L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 2.73e-01 0.0831 0.0756 0.385 B_Activated L2
ENSG00000075089 ACTR6 674211 sc-eQTL 1.66e-01 -0.117 0.0838 0.367 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 4.92e-01 -0.0618 0.0897 0.367 B_Intermediate L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 4.13e-01 0.04 0.0488 0.367 B_Intermediate L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 1.56e-02 0.174 0.0712 0.367 B_Intermediate L2
ENSG00000120800 UTP20 -406772 sc-eQTL 6.63e-01 0.035 0.0802 0.367 B_Intermediate L2
ENSG00000120805 ARL1 -534439 sc-eQTL 4.99e-01 0.0611 0.0902 0.367 B_Intermediate L2
ENSG00000136021 SCYL2 606193 sc-eQTL 5.76e-01 0.0412 0.0736 0.367 B_Intermediate L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 2.64e-01 0.0941 0.0839 0.367 B_Intermediate L2
ENSG00000075089 ACTR6 674211 sc-eQTL 4.08e-01 -0.0746 0.09 0.366 B_Memory L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 9.78e-01 -0.00243 0.0869 0.366 B_Memory L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.23e-01 0.0572 0.0578 0.366 B_Memory L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.07e-01 -0.0408 0.0792 0.366 B_Memory L2
ENSG00000120800 UTP20 -406772 sc-eQTL 6.74e-02 0.159 0.0864 0.366 B_Memory L2
ENSG00000120805 ARL1 -534439 sc-eQTL 9.99e-02 0.142 0.086 0.366 B_Memory L2
ENSG00000136021 SCYL2 606193 sc-eQTL 9.81e-01 0.00186 0.0788 0.366 B_Memory L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 9.26e-01 0.00774 0.0836 0.366 B_Memory L2
ENSG00000075089 ACTR6 674211 sc-eQTL 7.33e-02 -0.141 0.0785 0.365 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.27e-01 0.0265 0.0758 0.365 B_Naive1 L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.51e-01 0.026 0.0435 0.365 B_Naive1 L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.00e-01 0.0324 0.0616 0.365 B_Naive1 L2
ENSG00000120800 UTP20 -406772 sc-eQTL 2.87e-01 0.0779 0.073 0.365 B_Naive1 L2
ENSG00000120805 ARL1 -534439 sc-eQTL 2.65e-01 -0.0909 0.0814 0.365 B_Naive1 L2
ENSG00000136021 SCYL2 606193 sc-eQTL 8.02e-01 0.018 0.0716 0.365 B_Naive1 L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 4.39e-01 -0.0704 0.0909 0.365 B_Naive1 L2
ENSG00000075089 ACTR6 674211 sc-eQTL 2.25e-01 0.111 0.0908 0.365 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 9.70e-01 0.00331 0.0874 0.365 B_Naive2 L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 7.54e-01 0.0143 0.0456 0.365 B_Naive2 L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 9.58e-01 0.00371 0.0706 0.365 B_Naive2 L2
ENSG00000120800 UTP20 -406772 sc-eQTL 9.42e-01 0.00595 0.0819 0.365 B_Naive2 L2
ENSG00000120805 ARL1 -534439 sc-eQTL 9.51e-01 -0.00555 0.0899 0.365 B_Naive2 L2
ENSG00000136021 SCYL2 606193 sc-eQTL 5.95e-01 -0.0454 0.0853 0.365 B_Naive2 L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 9.76e-01 0.00248 0.0817 0.365 B_Naive2 L2
ENSG00000075089 ACTR6 674211 sc-eQTL 4.81e-01 -0.0641 0.0908 0.357 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 6.62e-01 -0.0394 0.0901 0.357 CD4_CTL L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 6.97e-01 0.0354 0.0908 0.357 CD4_CTL L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.66e-01 -0.0236 0.0794 0.357 CD4_CTL L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.46e-01 0.0528 0.0873 0.357 CD4_CTL L2
ENSG00000120805 ARL1 -534439 sc-eQTL 8.10e-01 -0.0223 0.0926 0.357 CD4_CTL L2
ENSG00000136021 SCYL2 606193 sc-eQTL 4.13e-01 0.0728 0.0887 0.357 CD4_CTL L2
ENSG00000075089 ACTR6 674211 sc-eQTL 9.39e-01 -0.00495 0.065 0.365 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 3.45e-01 -0.058 0.0612 0.365 CD4_Naive L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.27e-01 -0.0761 0.0775 0.365 CD4_Naive L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 3.18e-01 0.0598 0.0598 0.365 CD4_Naive L2
ENSG00000120800 UTP20 -406772 sc-eQTL 2.20e-01 0.0799 0.065 0.365 CD4_Naive L2
ENSG00000120805 ARL1 -534439 sc-eQTL 9.92e-01 0.000741 0.0707 0.365 CD4_Naive L2
ENSG00000136021 SCYL2 606193 sc-eQTL 6.61e-01 -0.0239 0.0544 0.365 CD4_Naive L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.93e-01 -0.0275 0.0695 0.365 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 5.20e-01 -0.0471 0.0731 0.365 CD4_TCM L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.42e-01 -0.0497 0.0815 0.365 CD4_TCM L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 5.25e-01 -0.0401 0.0631 0.365 CD4_TCM L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.62e-01 0.0459 0.079 0.365 CD4_TCM L2
ENSG00000120805 ARL1 -534439 sc-eQTL 2.16e-01 0.0914 0.0737 0.365 CD4_TCM L2
ENSG00000136021 SCYL2 606193 sc-eQTL 9.12e-02 -0.105 0.0616 0.365 CD4_TCM L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.27e-01 -0.0394 0.0809 0.365 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.23e-01 0.0285 0.0801 0.365 CD4_TEM L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 1.58e-01 -0.114 0.0803 0.365 CD4_TEM L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.44e-01 -0.0254 0.0777 0.365 CD4_TEM L2
ENSG00000120800 UTP20 -406772 sc-eQTL 3.06e-01 -0.0861 0.0839 0.365 CD4_TEM L2
ENSG00000120805 ARL1 -534439 sc-eQTL 9.65e-01 -0.00344 0.0794 0.365 CD4_TEM L2
ENSG00000136021 SCYL2 606193 sc-eQTL 1.52e-02 -0.197 0.0803 0.365 CD4_TEM L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.39e-01 -0.0348 0.074 0.365 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 9.94e-01 0.000611 0.0758 0.365 CD8_CTL L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 1.30e-01 -0.122 0.0803 0.365 CD8_CTL L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.41e-01 -0.0301 0.0646 0.365 CD8_CTL L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.35e-01 0.0543 0.0873 0.365 CD8_CTL L2
ENSG00000120805 ARL1 -534439 sc-eQTL 2.07e-01 -0.109 0.0861 0.365 CD8_CTL L2
ENSG00000136021 SCYL2 606193 sc-eQTL 8.62e-01 0.013 0.0747 0.365 CD8_CTL L2
ENSG00000075089 ACTR6 674211 sc-eQTL 9.15e-01 -0.00781 0.0727 0.365 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.01e-01 0.03 0.078 0.365 CD8_Naive L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.27e-01 -0.0178 0.0812 0.365 CD8_Naive L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.21e-01 -0.0261 0.0729 0.365 CD8_Naive L2
ENSG00000120800 UTP20 -406772 sc-eQTL 1.50e-01 0.112 0.0772 0.365 CD8_Naive L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.26e-01 -0.129 0.0838 0.365 CD8_Naive L2
ENSG00000136021 SCYL2 606193 sc-eQTL 9.43e-01 -0.00499 0.0694 0.365 CD8_Naive L2
ENSG00000075089 ACTR6 674211 sc-eQTL 7.56e-01 -0.0265 0.085 0.359 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 9.51e-02 -0.151 0.0902 0.359 CD8_TCM L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 4.18e-01 -0.0644 0.0792 0.359 CD8_TCM L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.67e-01 0.0598 0.082 0.359 CD8_TCM L2
ENSG00000120800 UTP20 -406772 sc-eQTL 2.85e-01 0.0957 0.0893 0.359 CD8_TCM L2
ENSG00000120805 ARL1 -534439 sc-eQTL 8.92e-02 -0.149 0.0874 0.359 CD8_TCM L2
ENSG00000136021 SCYL2 606193 sc-eQTL 1.59e-01 -0.127 0.0896 0.359 CD8_TCM L2
ENSG00000075089 ACTR6 674211 sc-eQTL 3.43e-01 -0.0824 0.0867 0.368 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.13e-01 0.116 0.0928 0.368 CD8_TEM L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 1.76e-01 0.113 0.083 0.368 CD8_TEM L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 5.71e-01 0.0507 0.0892 0.368 CD8_TEM L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.59e-01 -0.056 0.0957 0.368 CD8_TEM L2
ENSG00000120805 ARL1 -534439 sc-eQTL 3.03e-01 -0.0943 0.0914 0.368 CD8_TEM L2
ENSG00000136021 SCYL2 606193 sc-eQTL 1.65e-01 -0.132 0.0947 0.368 CD8_TEM L2
ENSG00000075089 ACTR6 674211 sc-eQTL 2.87e-01 -0.0949 0.0889 0.366 MAIT L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.46e-01 0.0268 0.0826 0.366 MAIT L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 1.87e-01 -0.111 0.0839 0.366 MAIT L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.47e-01 0.0568 0.0746 0.366 MAIT L2
ENSG00000120800 UTP20 -406772 sc-eQTL 7.07e-01 -0.0337 0.0895 0.366 MAIT L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.80e-01 -0.122 0.091 0.366 MAIT L2
ENSG00000136021 SCYL2 606193 sc-eQTL 9.66e-01 0.00328 0.0776 0.366 MAIT L2
ENSG00000075089 ACTR6 674211 sc-eQTL 4.47e-01 -0.0665 0.0873 0.364 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.74e-01 0.0917 0.0835 0.364 NK_CD56bright L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 7.56e-01 -0.0212 0.068 0.364 NK_CD56bright L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.05e-01 0.0655 0.0784 0.364 NK_CD56bright L2
ENSG00000120800 UTP20 -406772 sc-eQTL 6.12e-01 0.0466 0.0916 0.364 NK_CD56bright L2
ENSG00000120805 ARL1 -534439 sc-eQTL 2.72e-02 -0.197 0.0885 0.364 NK_CD56bright L2
ENSG00000136021 SCYL2 606193 sc-eQTL 7.53e-01 -0.0266 0.0842 0.364 NK_CD56bright L2
ENSG00000075089 ACTR6 674211 sc-eQTL 9.89e-01 -0.00104 0.0785 0.362 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.80e-01 -0.0187 0.0671 0.362 NK_CD56dim L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.27e-01 -0.0505 0.0798 0.362 NK_CD56dim L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.54e-01 0.0452 0.0603 0.362 NK_CD56dim L2
ENSG00000120800 UTP20 -406772 sc-eQTL 4.52e-02 0.167 0.083 0.362 NK_CD56dim L2
ENSG00000120805 ARL1 -534439 sc-eQTL 7.84e-01 -0.0223 0.0811 0.362 NK_CD56dim L2
ENSG00000136021 SCYL2 606193 sc-eQTL 2.39e-01 -0.0833 0.0706 0.362 NK_CD56dim L2
ENSG00000075089 ACTR6 674211 sc-eQTL 2.10e-01 -0.11 0.0875 0.37 NK_HLA L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 5.45e-01 -0.0536 0.0885 0.37 NK_HLA L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.07e-01 0.0871 0.0851 0.37 NK_HLA L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 2.41e-01 -0.0805 0.0684 0.37 NK_HLA L2
ENSG00000120800 UTP20 -406772 sc-eQTL 7.35e-01 -0.0304 0.0897 0.37 NK_HLA L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.56e-02 -0.22 0.0903 0.37 NK_HLA L2
ENSG00000136021 SCYL2 606193 sc-eQTL 3.46e-01 0.0853 0.0903 0.37 NK_HLA L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.12e-02 -0.146 0.0776 0.362 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.42e-01 -0.0145 0.0728 0.362 NK_cytokine L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 7.73e-01 -0.0222 0.0769 0.362 NK_cytokine L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 5.34e-01 -0.0363 0.0583 0.362 NK_cytokine L2
ENSG00000120800 UTP20 -406772 sc-eQTL 4.73e-01 -0.0585 0.0813 0.362 NK_cytokine L2
ENSG00000120805 ARL1 -534439 sc-eQTL 9.77e-01 0.00234 0.0819 0.362 NK_cytokine L2
ENSG00000136021 SCYL2 606193 sc-eQTL 4.20e-01 0.0553 0.0684 0.362 NK_cytokine L2
ENSG00000075089 ACTR6 674211 sc-eQTL 3.83e-02 -0.234 0.112 0.385 PB L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.65e-01 -0.122 0.109 0.385 PB L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.13e-01 -0.016 0.0676 0.385 PB L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.40e-01 0.0455 0.0971 0.385 PB L2
ENSG00000120800 UTP20 -406772 sc-eQTL 7.87e-01 -0.0303 0.112 0.385 PB L2
ENSG00000120805 ARL1 -534439 sc-eQTL 3.16e-01 -0.0688 0.0683 0.385 PB L2
ENSG00000136021 SCYL2 606193 sc-eQTL 7.95e-01 0.0305 0.117 0.385 PB L2
ENSG00000139351 SYCP3 -866139 sc-eQTL 4.75e-01 -0.0668 0.0931 0.385 PB L2
ENSG00000075089 ACTR6 674211 sc-eQTL 8.67e-01 -0.0146 0.0873 0.365 Pro_T L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 9.73e-01 -0.00292 0.087 0.365 Pro_T L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.72e-02 -0.151 0.079 0.365 Pro_T L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 3.00e-02 0.127 0.0583 0.365 Pro_T L2
ENSG00000120800 UTP20 -406772 sc-eQTL 9.06e-01 0.00997 0.0842 0.365 Pro_T L2
ENSG00000120805 ARL1 -534439 sc-eQTL 8.63e-01 -0.011 0.0637 0.365 Pro_T L2
ENSG00000136021 SCYL2 606193 sc-eQTL 1.08e-01 -0.136 0.0845 0.365 Pro_T L2
ENSG00000075089 ACTR6 674211 sc-eQTL 2.58e-01 -0.0948 0.0836 0.365 Treg L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 5.62e-01 -0.0498 0.0858 0.365 Treg L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.60e-01 -0.0525 0.0899 0.365 Treg L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 1.57e-01 -0.111 0.0782 0.365 Treg L2
ENSG00000120800 UTP20 -406772 sc-eQTL 7.98e-01 0.0219 0.0856 0.365 Treg L2
ENSG00000120805 ARL1 -534439 sc-eQTL 8.01e-01 0.0224 0.0885 0.365 Treg L2
ENSG00000136021 SCYL2 606193 sc-eQTL 4.63e-01 -0.0596 0.0811 0.365 Treg L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.96e-01 0.0344 0.0881 0.368 cDC L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 4.80e-01 -0.0655 0.0925 0.368 cDC L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 2.05e-01 -0.102 0.0801 0.368 cDC L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 8.42e-01 -0.0207 0.104 0.368 cDC L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.07e-01 0.0624 0.0939 0.368 cDC L2
ENSG00000120805 ARL1 -534439 sc-eQTL 6.12e-02 0.182 0.0966 0.368 cDC L2
ENSG00000136021 SCYL2 606193 sc-eQTL 8.95e-01 -0.0116 0.0883 0.368 cDC L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 1.62e-01 -0.122 0.0868 0.368 cDC L2
ENSG00000075089 ACTR6 674211 sc-eQTL 4.40e-01 0.0571 0.0737 0.365 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.60e-01 -0.0182 0.0593 0.365 cMono_IL1B L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 9.61e-01 0.00286 0.0583 0.365 cMono_IL1B L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.67e-01 0.0229 0.0773 0.365 cMono_IL1B L2
ENSG00000120800 UTP20 -406772 sc-eQTL 3.43e-01 0.0825 0.0867 0.365 cMono_IL1B L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.79e-01 0.105 0.0775 0.365 cMono_IL1B L2
ENSG00000136021 SCYL2 606193 sc-eQTL 1.71e-02 0.171 0.071 0.365 cMono_IL1B L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 3.42e-01 0.0595 0.0625 0.365 cMono_IL1B L2
ENSG00000075089 ACTR6 674211 sc-eQTL 3.20e-01 -0.082 0.0822 0.365 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.12e-01 -0.0185 0.0774 0.365 cMono_S100A L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 7.43e-01 -0.0211 0.0641 0.365 cMono_S100A L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.13e-01 -0.0287 0.0779 0.365 cMono_S100A L2
ENSG00000120800 UTP20 -406772 sc-eQTL 2.85e-02 0.199 0.0903 0.365 cMono_S100A L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.79e-01 -0.115 0.0854 0.365 cMono_S100A L2
ENSG00000136021 SCYL2 606193 sc-eQTL 7.19e-01 -0.0282 0.0782 0.365 cMono_S100A L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 7.42e-01 0.0255 0.0775 0.365 cMono_S100A L2
ENSG00000075089 ACTR6 674211 sc-eQTL 3.53e-01 -0.0956 0.103 0.364 gdT L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 1.94e-02 -0.24 0.102 0.364 gdT L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 6.14e-01 0.0497 0.0982 0.364 gdT L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.34e-01 0.0252 0.074 0.364 gdT L2
ENSG00000120800 UTP20 -406772 sc-eQTL 4.92e-01 -0.0673 0.0977 0.364 gdT L2
ENSG00000120805 ARL1 -534439 sc-eQTL 6.18e-01 0.0513 0.102 0.364 gdT L2
ENSG00000136021 SCYL2 606193 sc-eQTL 9.81e-01 -0.00249 0.105 0.364 gdT L2
ENSG00000075089 ACTR6 674211 sc-eQTL 5.14e-01 -0.0576 0.088 0.362 intMono L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.03e-03 -0.274 0.0875 0.362 intMono L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.04e-01 0.0797 0.0773 0.362 intMono L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 8.33e-01 0.0192 0.0911 0.362 intMono L2
ENSG00000120800 UTP20 -406772 sc-eQTL 6.29e-01 -0.0413 0.0852 0.362 intMono L2
ENSG00000120805 ARL1 -534439 sc-eQTL 2.45e-01 -0.103 0.0879 0.362 intMono L2
ENSG00000136021 SCYL2 606193 sc-eQTL 5.25e-01 0.0569 0.0893 0.362 intMono L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 2.24e-01 0.1 0.0822 0.362 intMono L2
ENSG00000075089 ACTR6 674211 sc-eQTL 6.12e-01 -0.0429 0.0845 0.362 ncMono L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 1.61e-01 0.117 0.0834 0.362 ncMono L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 8.30e-01 -0.0169 0.0789 0.362 ncMono L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 4.41e-01 0.0729 0.0944 0.362 ncMono L2
ENSG00000120800 UTP20 -406772 sc-eQTL 5.13e-01 0.0541 0.0825 0.362 ncMono L2
ENSG00000120805 ARL1 -534439 sc-eQTL 4.60e-01 -0.0587 0.0793 0.362 ncMono L2
ENSG00000136021 SCYL2 606193 sc-eQTL 4.70e-01 -0.0628 0.0867 0.362 ncMono L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 7.99e-01 -0.0189 0.0739 0.362 ncMono L2
ENSG00000075089 ACTR6 674211 sc-eQTL 3.07e-01 0.0922 0.09 0.373 pDC L2
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.70e-01 -0.0255 0.0871 0.373 pDC L2
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.15e-02 -0.167 0.085 0.373 pDC L2
ENSG00000111670 GNPTAB -957626 sc-eQTL 3.54e-01 -0.0844 0.0908 0.373 pDC L2
ENSG00000120800 UTP20 -406772 sc-eQTL 9.06e-01 0.0108 0.0906 0.373 pDC L2
ENSG00000120805 ARL1 -534439 sc-eQTL 1.34e-01 0.143 0.0947 0.373 pDC L2
ENSG00000136021 SCYL2 606193 sc-eQTL 3.55e-01 0.0878 0.0945 0.373 pDC L2
ENSG00000139354 GAS2L3 299650 sc-eQTL 7.49e-01 -0.0246 0.0767 0.373 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674211 sc-eQTL 1.39e-01 -0.124 0.0834 0.365 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.03e-01 -0.0209 0.0836 0.365 B_Memory LOneK1K
ENSG00000111666 CHPT1 -823614 sc-eQTL 3.48e-01 0.042 0.0446 0.365 B_Memory LOneK1K
ENSG00000111670 GNPTAB -957626 sc-eQTL 1.90e-01 0.0919 0.07 0.365 B_Memory LOneK1K
ENSG00000120800 UTP20 -406772 sc-eQTL 1.92e-02 0.169 0.0714 0.365 B_Memory LOneK1K
ENSG00000120805 ARL1 -534439 sc-eQTL 9.21e-02 0.138 0.0813 0.365 B_Memory LOneK1K
ENSG00000136021 SCYL2 606193 sc-eQTL 6.85e-01 0.0266 0.0655 0.365 B_Memory LOneK1K
ENSG00000139351 SYCP3 -866139 sc-eQTL 1.28e-01 0.128 0.0839 0.365 B_Memory LOneK1K
ENSG00000075089 ACTR6 674211 sc-eQTL 5.19e-01 -0.0511 0.0791 0.365 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 5.55e-01 0.0424 0.0718 0.365 B_Naive LOneK1K
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.86e-01 0.0217 0.0398 0.365 B_Naive LOneK1K
ENSG00000111670 GNPTAB -957626 sc-eQTL 7.27e-01 0.0199 0.057 0.365 B_Naive LOneK1K
ENSG00000120800 UTP20 -406772 sc-eQTL 5.05e-01 0.0466 0.0697 0.365 B_Naive LOneK1K
ENSG00000120805 ARL1 -534439 sc-eQTL 5.86e-01 -0.0434 0.0795 0.365 B_Naive LOneK1K
ENSG00000136021 SCYL2 606193 sc-eQTL 8.17e-01 0.0165 0.0708 0.365 B_Naive LOneK1K
ENSG00000139351 SYCP3 -866139 sc-eQTL 5.37e-01 -0.0557 0.0901 0.365 B_Naive LOneK1K
ENSG00000075089 ACTR6 674211 sc-eQTL 9.35e-01 -0.00585 0.0717 0.365 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 8.27e-01 -0.0124 0.0568 0.365 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -823614 sc-eQTL 1.00e+00 -6.07e-06 0.0574 0.365 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -957626 sc-eQTL 9.61e-01 -0.00357 0.0739 0.365 CD14_Mono LOneK1K
ENSG00000120800 UTP20 -406772 sc-eQTL 5.47e-02 0.167 0.0866 0.365 CD14_Mono LOneK1K
ENSG00000120805 ARL1 -534439 sc-eQTL 9.62e-01 -0.0036 0.0748 0.365 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 606193 sc-eQTL 5.59e-02 0.122 0.0633 0.365 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 299650 sc-eQTL 2.87e-01 0.0652 0.0611 0.365 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 674211 sc-eQTL 3.58e-01 -0.0791 0.0858 0.362 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 2.87e-01 -0.0857 0.0803 0.362 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -823614 sc-eQTL 6.57e-01 -0.0323 0.0727 0.362 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -957626 sc-eQTL 9.05e-01 0.0105 0.088 0.362 CD16_Mono LOneK1K
ENSG00000120800 UTP20 -406772 sc-eQTL 9.86e-01 0.00151 0.0847 0.362 CD16_Mono LOneK1K
ENSG00000120805 ARL1 -534439 sc-eQTL 3.72e-01 -0.0751 0.084 0.362 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 606193 sc-eQTL 7.82e-01 -0.0221 0.0797 0.362 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 299650 sc-eQTL 8.58e-01 0.0138 0.0768 0.362 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 674211 sc-eQTL 6.08e-01 -0.0356 0.0692 0.362 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 730459 sc-eQTL 7.07e-01 -0.0219 0.0581 0.362 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -823614 sc-eQTL 5.28e-01 -0.0483 0.0764 0.362 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -957626 sc-eQTL 6.34e-01 0.025 0.0524 0.362 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 -406772 sc-eQTL 4.21e-01 0.0647 0.0803 0.362 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 -534439 sc-eQTL 3.17e-01 -0.0746 0.0744 0.362 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 606193 sc-eQTL 6.96e-01 -0.023 0.0589 0.362 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 \N -823614 2.91e-07 1.42e-07 6.26e-08 2.05e-07 1.01e-07 8.21e-08 1.9e-07 5.68e-08 1.59e-07 7.6e-08 1.63e-07 1.2e-07 1.95e-07 7.95e-08 5.43e-08 8.08e-08 4.18e-08 1.72e-07 7.18e-08 5.2e-08 1.22e-07 1.42e-07 1.62e-07 3.4e-08 1.85e-07 1.31e-07 1.19e-07 1.04e-07 1.31e-07 1.06e-07 1.09e-07 3.55e-08 3.38e-08 9.76e-08 3.12e-08 3.07e-08 5.65e-08 8.51e-08 6.42e-08 4.24e-08 5.81e-08 1.48e-07 5.39e-08 1.09e-08 3.29e-08 1.71e-08 8.81e-08 1.93e-09 4.69e-08
ENSG00000139351 \N -866136 2.77e-07 1.36e-07 5.93e-08 1.97e-07 9.94e-08 8.45e-08 1.73e-07 5.62e-08 1.44e-07 6.75e-08 1.67e-07 1.15e-07 1.79e-07 7.64e-08 5.82e-08 7.89e-08 4.31e-08 1.56e-07 6.92e-08 5.04e-08 1.27e-07 1.31e-07 1.58e-07 2.68e-08 1.68e-07 1.26e-07 1.17e-07 1.06e-07 1.26e-07 1.05e-07 1.07e-07 3.59e-08 3.13e-08 8.89e-08 3.4e-08 2.69e-08 5.3e-08 9.17e-08 6.58e-08 3.67e-08 5.48e-08 1.46e-07 5.27e-08 7.43e-09 3.2e-08 1.8e-08 1e-07 1.9e-09 4.82e-08