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Genes within 1Mb (chr12:100840232:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 641110 sc-eQTL 5.35e-01 -0.0455 0.0732 0.62 B L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 9.08e-01 0.00718 0.0622 0.62 B L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.48e-02 0.0771 0.0382 0.62 B L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 3.41e-01 0.0532 0.0557 0.62 B L1
ENSG00000120800 UTP20 -439873 sc-eQTL 1.86e-01 0.0839 0.0632 0.62 B L1
ENSG00000120805 ARL1 -567540 sc-eQTL 3.06e-01 0.0558 0.0544 0.62 B L1
ENSG00000136021 SCYL2 573092 sc-eQTL 4.49e-01 0.0469 0.0619 0.62 B L1
ENSG00000139351 SYCP3 -899240 sc-eQTL 3.39e-01 0.0752 0.0785 0.62 B L1
ENSG00000075089 ACTR6 641110 sc-eQTL 1.63e-01 -0.0781 0.0557 0.62 CD4T L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.00e-01 0.0201 0.0521 0.62 CD4T L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 7.16e-01 0.0284 0.0779 0.62 CD4T L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.21e-02 0.101 0.0536 0.62 CD4T L1
ENSG00000120800 UTP20 -439873 sc-eQTL 9.94e-01 0.000481 0.0598 0.62 CD4T L1
ENSG00000120805 ARL1 -567540 sc-eQTL 8.52e-02 0.1 0.058 0.62 CD4T L1
ENSG00000136021 SCYL2 573092 sc-eQTL 8.73e-01 0.00711 0.0446 0.62 CD4T L1
ENSG00000075089 ACTR6 641110 sc-eQTL 3.68e-01 -0.056 0.062 0.62 CD8T L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 8.44e-01 0.0121 0.0615 0.62 CD8T L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.25e-01 0.0172 0.0777 0.62 CD8T L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.29e-01 0.0772 0.0507 0.62 CD8T L1
ENSG00000120800 UTP20 -439873 sc-eQTL 2.07e-02 0.148 0.0636 0.62 CD8T L1
ENSG00000120805 ARL1 -567540 sc-eQTL 3.19e-01 0.0708 0.0709 0.62 CD8T L1
ENSG00000136021 SCYL2 573092 sc-eQTL 5.22e-01 -0.0369 0.0576 0.62 CD8T L1
ENSG00000075089 ACTR6 641110 sc-eQTL 8.73e-01 -0.0132 0.0824 0.622 DC L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 1.73e-01 -0.108 0.0791 0.622 DC L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 3.93e-01 0.0642 0.075 0.622 DC L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.01e-01 -0.0318 0.0826 0.622 DC L1
ENSG00000120800 UTP20 -439873 sc-eQTL 3.14e-02 0.19 0.0876 0.622 DC L1
ENSG00000120805 ARL1 -567540 sc-eQTL 7.60e-01 -0.0281 0.0916 0.622 DC L1
ENSG00000136021 SCYL2 573092 sc-eQTL 2.23e-01 0.107 0.0877 0.622 DC L1
ENSG00000139354 GAS2L3 266549 sc-eQTL 6.21e-01 -0.0405 0.0818 0.622 DC L1
ENSG00000075089 ACTR6 641110 sc-eQTL 7.04e-01 -0.0276 0.0725 0.62 Mono L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.91e-01 -0.0412 0.0596 0.62 Mono L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.98e-01 -0.0393 0.0579 0.62 Mono L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.83e-01 -0.02 0.0727 0.62 Mono L1
ENSG00000120800 UTP20 -439873 sc-eQTL 7.49e-01 -0.026 0.081 0.62 Mono L1
ENSG00000120805 ARL1 -567540 sc-eQTL 2.39e-01 0.0879 0.0743 0.62 Mono L1
ENSG00000136021 SCYL2 573092 sc-eQTL 7.58e-01 -0.0192 0.0622 0.62 Mono L1
ENSG00000139354 GAS2L3 266549 sc-eQTL 1.33e-01 0.0874 0.0579 0.62 Mono L1
ENSG00000075089 ACTR6 641110 sc-eQTL 6.19e-01 -0.033 0.0661 0.618 NK L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 9.96e-01 0.000277 0.0546 0.618 NK L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.51e-01 0.0513 0.0679 0.618 NK L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.47e-01 0.0715 0.0491 0.618 NK L1
ENSG00000120800 UTP20 -439873 sc-eQTL 1.53e-01 0.113 0.0789 0.618 NK L1
ENSG00000120805 ARL1 -567540 sc-eQTL 8.85e-01 0.0106 0.0729 0.618 NK L1
ENSG00000136021 SCYL2 573092 sc-eQTL 1.83e-01 -0.0747 0.0559 0.618 NK L1
ENSG00000075089 ACTR6 641110 sc-eQTL 2.31e-01 0.0947 0.0788 0.62 Other_T L1
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.55e-01 0.0443 0.075 0.62 Other_T L1
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.52e-01 0.0144 0.0771 0.62 Other_T L1
ENSG00000111670 GNPTAB -990727 sc-eQTL 2.27e-01 0.0671 0.0554 0.62 Other_T L1
ENSG00000120800 UTP20 -439873 sc-eQTL 3.76e-01 -0.077 0.0867 0.62 Other_T L1
ENSG00000120805 ARL1 -567540 sc-eQTL 7.28e-01 0.022 0.0633 0.62 Other_T L1
ENSG00000136021 SCYL2 573092 sc-eQTL 6.32e-01 -0.0332 0.0691 0.62 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 641110 sc-eQTL 9.34e-01 0.00786 0.0951 0.597 B_Activated L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 8.85e-02 -0.173 0.101 0.597 B_Activated L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 2.91e-01 0.0698 0.0659 0.597 B_Activated L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.92e-01 -0.0373 0.0939 0.597 B_Activated L2
ENSG00000120800 UTP20 -439873 sc-eQTL 7.13e-01 -0.0335 0.0908 0.597 B_Activated L2
ENSG00000120805 ARL1 -567540 sc-eQTL 3.50e-01 0.0876 0.0936 0.597 B_Activated L2
ENSG00000136021 SCYL2 573092 sc-eQTL 5.12e-02 -0.186 0.0946 0.597 B_Activated L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 2.92e-02 0.16 0.0727 0.597 B_Activated L2
ENSG00000075089 ACTR6 641110 sc-eQTL 9.23e-01 -0.00818 0.0846 0.62 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 6.75e-01 0.0378 0.0902 0.62 B_Intermediate L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 1.07e-01 0.079 0.0488 0.62 B_Intermediate L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 8.37e-02 0.125 0.072 0.62 B_Intermediate L2
ENSG00000120800 UTP20 -439873 sc-eQTL 7.22e-01 0.0287 0.0806 0.62 B_Intermediate L2
ENSG00000120805 ARL1 -567540 sc-eQTL 3.73e-01 0.0809 0.0906 0.62 B_Intermediate L2
ENSG00000136021 SCYL2 573092 sc-eQTL 6.49e-01 0.0337 0.0739 0.62 B_Intermediate L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 1.75e-01 0.114 0.0842 0.62 B_Intermediate L2
ENSG00000075089 ACTR6 641110 sc-eQTL 8.18e-01 -0.0205 0.0889 0.625 B_Memory L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 3.71e-01 -0.0767 0.0855 0.625 B_Memory L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 2.68e-01 0.0633 0.0569 0.625 B_Memory L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.05e-01 -0.0405 0.0781 0.625 B_Memory L2
ENSG00000120800 UTP20 -439873 sc-eQTL 9.45e-01 0.00592 0.0858 0.625 B_Memory L2
ENSG00000120805 ARL1 -567540 sc-eQTL 4.69e-01 0.0618 0.0852 0.625 B_Memory L2
ENSG00000136021 SCYL2 573092 sc-eQTL 2.18e-01 0.0958 0.0774 0.625 B_Memory L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 4.48e-01 -0.0626 0.0823 0.625 B_Memory L2
ENSG00000075089 ACTR6 641110 sc-eQTL 2.51e-01 -0.0919 0.0798 0.62 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 2.77e-01 0.0834 0.0764 0.62 B_Naive1 L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 7.33e-02 0.0787 0.0437 0.62 B_Naive1 L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.66e-01 0.027 0.0623 0.62 B_Naive1 L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.54e-01 0.0686 0.0739 0.62 B_Naive1 L2
ENSG00000120805 ARL1 -567540 sc-eQTL 4.07e-01 0.0685 0.0825 0.62 B_Naive1 L2
ENSG00000136021 SCYL2 573092 sc-eQTL 5.41e-01 0.0443 0.0724 0.62 B_Naive1 L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 1.58e-01 0.13 0.0916 0.62 B_Naive1 L2
ENSG00000075089 ACTR6 641110 sc-eQTL 7.03e-01 -0.0341 0.0892 0.622 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 9.13e-01 0.00934 0.0856 0.622 B_Naive2 L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 3.66e-02 0.0929 0.0442 0.622 B_Naive2 L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 4.33e-01 0.0543 0.0691 0.622 B_Naive2 L2
ENSG00000120800 UTP20 -439873 sc-eQTL 5.05e-01 0.0535 0.0801 0.622 B_Naive2 L2
ENSG00000120805 ARL1 -567540 sc-eQTL 9.39e-01 0.00669 0.088 0.622 B_Naive2 L2
ENSG00000136021 SCYL2 573092 sc-eQTL 9.48e-01 0.00544 0.0836 0.622 B_Naive2 L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 3.97e-01 -0.0677 0.0798 0.622 B_Naive2 L2
ENSG00000075089 ACTR6 641110 sc-eQTL 1.91e-01 -0.117 0.0896 0.62 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.04e-01 0.0339 0.0891 0.62 CD4_CTL L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 9.50e-01 0.00565 0.0899 0.62 CD4_CTL L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.81e-01 -0.105 0.0782 0.62 CD4_CTL L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.84e-01 -0.0753 0.0863 0.62 CD4_CTL L2
ENSG00000120805 ARL1 -567540 sc-eQTL 5.96e-01 0.0486 0.0915 0.62 CD4_CTL L2
ENSG00000136021 SCYL2 573092 sc-eQTL 8.69e-01 0.0145 0.0879 0.62 CD4_CTL L2
ENSG00000075089 ACTR6 641110 sc-eQTL 4.18e-01 -0.0522 0.0643 0.62 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.10e-01 0.0501 0.0607 0.62 CD4_Naive L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.46e-01 0.0149 0.0769 0.62 CD4_Naive L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.16e-01 0.0931 0.059 0.62 CD4_Naive L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.11e-01 0.0655 0.0645 0.62 CD4_Naive L2
ENSG00000120805 ARL1 -567540 sc-eQTL 4.29e-01 0.0554 0.0699 0.62 CD4_Naive L2
ENSG00000136021 SCYL2 573092 sc-eQTL 9.98e-01 0.000114 0.0539 0.62 CD4_Naive L2
ENSG00000075089 ACTR6 641110 sc-eQTL 7.40e-01 -0.0228 0.0686 0.62 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.24e-01 -0.046 0.0721 0.62 CD4_TCM L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.76e-01 0.0575 0.0804 0.62 CD4_TCM L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.92e-02 0.113 0.0619 0.62 CD4_TCM L2
ENSG00000120800 UTP20 -439873 sc-eQTL 8.44e-01 0.0154 0.078 0.62 CD4_TCM L2
ENSG00000120805 ARL1 -567540 sc-eQTL 2.20e-01 0.0895 0.0727 0.62 CD4_TCM L2
ENSG00000136021 SCYL2 573092 sc-eQTL 7.07e-01 0.023 0.0612 0.62 CD4_TCM L2
ENSG00000075089 ACTR6 641110 sc-eQTL 1.85e-01 -0.107 0.0805 0.62 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 8.89e-01 -0.0112 0.08 0.62 CD4_TEM L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.64e-01 -0.0138 0.0806 0.62 CD4_TEM L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 4.43e-01 0.0595 0.0775 0.62 CD4_TEM L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.75e-02 -0.174 0.0831 0.62 CD4_TEM L2
ENSG00000120805 ARL1 -567540 sc-eQTL 6.75e-01 0.0332 0.0793 0.62 CD4_TEM L2
ENSG00000136021 SCYL2 573092 sc-eQTL 2.79e-01 -0.088 0.0811 0.62 CD4_TEM L2
ENSG00000075089 ACTR6 641110 sc-eQTL 4.26e-02 -0.146 0.0714 0.62 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 3.57e-01 0.068 0.0737 0.62 CD8_CTL L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 6.79e-01 -0.0326 0.0786 0.62 CD8_CTL L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.05e-01 0.102 0.0625 0.62 CD8_CTL L2
ENSG00000120800 UTP20 -439873 sc-eQTL 6.15e-02 0.159 0.0844 0.62 CD8_CTL L2
ENSG00000120805 ARL1 -567540 sc-eQTL 2.96e-01 0.0879 0.0839 0.62 CD8_CTL L2
ENSG00000136021 SCYL2 573092 sc-eQTL 3.56e-01 -0.0672 0.0726 0.62 CD8_CTL L2
ENSG00000075089 ACTR6 641110 sc-eQTL 4.66e-01 -0.0532 0.0728 0.62 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 6.79e-01 0.0324 0.0781 0.62 CD8_Naive L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 9.60e-01 0.00408 0.0814 0.62 CD8_Naive L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 5.21e-01 0.0469 0.073 0.62 CD8_Naive L2
ENSG00000120800 UTP20 -439873 sc-eQTL 9.61e-02 0.129 0.0772 0.62 CD8_Naive L2
ENSG00000120805 ARL1 -567540 sc-eQTL 5.33e-01 -0.0526 0.0843 0.62 CD8_Naive L2
ENSG00000136021 SCYL2 573092 sc-eQTL 6.16e-01 -0.0349 0.0695 0.62 CD8_Naive L2
ENSG00000075089 ACTR6 641110 sc-eQTL 2.38e-01 0.0989 0.0835 0.616 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.45e-01 -0.0685 0.0894 0.616 CD8_TCM L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 9.87e-01 -0.0013 0.0782 0.616 CD8_TCM L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.22e-02 0.145 0.0803 0.616 CD8_TCM L2
ENSG00000120800 UTP20 -439873 sc-eQTL 4.40e-01 0.0682 0.0882 0.616 CD8_TCM L2
ENSG00000120805 ARL1 -567540 sc-eQTL 3.43e-01 0.0822 0.0866 0.616 CD8_TCM L2
ENSG00000136021 SCYL2 573092 sc-eQTL 6.36e-01 0.042 0.0888 0.616 CD8_TCM L2
ENSG00000075089 ACTR6 641110 sc-eQTL 2.82e-01 -0.0902 0.0836 0.616 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 6.82e-01 -0.0369 0.09 0.616 CD8_TEM L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 5.43e-01 -0.0491 0.0805 0.616 CD8_TEM L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 8.02e-01 -0.0217 0.0862 0.616 CD8_TEM L2
ENSG00000120800 UTP20 -439873 sc-eQTL 8.88e-01 -0.013 0.0925 0.616 CD8_TEM L2
ENSG00000120805 ARL1 -567540 sc-eQTL 7.38e-01 0.0296 0.0885 0.616 CD8_TEM L2
ENSG00000136021 SCYL2 573092 sc-eQTL 8.37e-01 0.019 0.0919 0.616 CD8_TEM L2
ENSG00000075089 ACTR6 641110 sc-eQTL 8.21e-01 -0.0199 0.0876 0.621 MAIT L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.64e-01 0.0594 0.081 0.621 MAIT L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 6.97e-01 0.0322 0.0827 0.621 MAIT L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.88e-01 -0.0197 0.0734 0.621 MAIT L2
ENSG00000120800 UTP20 -439873 sc-eQTL 1.55e-01 -0.125 0.0875 0.621 MAIT L2
ENSG00000120805 ARL1 -567540 sc-eQTL 4.69e-01 -0.0651 0.0896 0.621 MAIT L2
ENSG00000136021 SCYL2 573092 sc-eQTL 7.11e-01 -0.0282 0.0761 0.621 MAIT L2
ENSG00000075089 ACTR6 641110 sc-eQTL 7.36e-01 -0.0292 0.0867 0.62 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 3.05e-01 0.0852 0.0829 0.62 NK_CD56bright L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.58e-01 0.0121 0.0674 0.62 NK_CD56bright L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 5.87e-01 0.0423 0.0778 0.62 NK_CD56bright L2
ENSG00000120800 UTP20 -439873 sc-eQTL 8.98e-01 0.0116 0.0909 0.62 NK_CD56bright L2
ENSG00000120805 ARL1 -567540 sc-eQTL 7.54e-01 -0.0279 0.0888 0.62 NK_CD56bright L2
ENSG00000136021 SCYL2 573092 sc-eQTL 1.85e-01 0.111 0.0832 0.62 NK_CD56bright L2
ENSG00000075089 ACTR6 641110 sc-eQTL 4.27e-01 -0.0623 0.0784 0.616 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 9.79e-01 0.00176 0.067 0.616 NK_CD56dim L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 2.93e-01 0.0839 0.0796 0.616 NK_CD56dim L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 2.30e-01 0.0723 0.0601 0.616 NK_CD56dim L2
ENSG00000120800 UTP20 -439873 sc-eQTL 7.95e-01 -0.0218 0.0838 0.616 NK_CD56dim L2
ENSG00000120805 ARL1 -567540 sc-eQTL 3.12e-01 -0.0819 0.0808 0.616 NK_CD56dim L2
ENSG00000136021 SCYL2 573092 sc-eQTL 3.78e-02 -0.146 0.07 0.616 NK_CD56dim L2
ENSG00000075089 ACTR6 641110 sc-eQTL 1.56e-01 -0.127 0.089 0.619 NK_HLA L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.21e-01 -0.0323 0.0902 0.619 NK_HLA L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 1.34e-01 0.13 0.0865 0.619 NK_HLA L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.58e-01 0.0986 0.0696 0.619 NK_HLA L2
ENSG00000120800 UTP20 -439873 sc-eQTL 2.25e-01 0.111 0.0911 0.619 NK_HLA L2
ENSG00000120805 ARL1 -567540 sc-eQTL 6.47e-01 0.0429 0.0934 0.619 NK_HLA L2
ENSG00000136021 SCYL2 573092 sc-eQTL 6.17e-01 -0.0462 0.0922 0.619 NK_HLA L2
ENSG00000075089 ACTR6 641110 sc-eQTL 1.76e-01 0.107 0.0789 0.616 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.41e-01 -0.0568 0.0736 0.616 NK_cytokine L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 7.94e-01 0.0204 0.0779 0.616 NK_cytokine L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.37e-01 0.0199 0.0591 0.616 NK_cytokine L2
ENSG00000120800 UTP20 -439873 sc-eQTL 2.70e-02 0.182 0.0815 0.616 NK_cytokine L2
ENSG00000120805 ARL1 -567540 sc-eQTL 1.28e-01 0.126 0.0825 0.616 NK_cytokine L2
ENSG00000136021 SCYL2 573092 sc-eQTL 9.21e-01 -0.00692 0.0694 0.616 NK_cytokine L2
ENSG00000075089 ACTR6 641110 sc-eQTL 1.76e-01 -0.159 0.117 0.641 PB L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.91e-01 -0.0784 0.113 0.641 PB L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.08e-01 0.017 0.07 0.641 PB L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 4.53e-01 0.0756 0.1 0.641 PB L2
ENSG00000120800 UTP20 -439873 sc-eQTL 6.91e-01 -0.046 0.116 0.641 PB L2
ENSG00000120805 ARL1 -567540 sc-eQTL 7.60e-01 -0.0217 0.071 0.641 PB L2
ENSG00000136021 SCYL2 573092 sc-eQTL 9.93e-01 0.00102 0.121 0.641 PB L2
ENSG00000139351 SYCP3 -899240 sc-eQTL 5.05e-01 0.0645 0.0964 0.641 PB L2
ENSG00000075089 ACTR6 641110 sc-eQTL 6.70e-01 -0.038 0.089 0.622 Pro_T L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.99e-01 0.0467 0.0887 0.622 Pro_T L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 7.35e-01 -0.0276 0.0813 0.622 Pro_T L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 9.70e-01 0.00223 0.0601 0.622 Pro_T L2
ENSG00000120800 UTP20 -439873 sc-eQTL 4.71e-01 -0.0619 0.0858 0.622 Pro_T L2
ENSG00000120805 ARL1 -567540 sc-eQTL 2.30e-01 -0.078 0.0647 0.622 Pro_T L2
ENSG00000136021 SCYL2 573092 sc-eQTL 4.87e-01 0.0603 0.0866 0.622 Pro_T L2
ENSG00000075089 ACTR6 641110 sc-eQTL 7.74e-01 -0.024 0.0836 0.62 Treg L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 2.87e-01 -0.0911 0.0854 0.62 Treg L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 2.34e-01 0.107 0.0894 0.62 Treg L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 2.65e-02 0.173 0.0775 0.62 Treg L2
ENSG00000120800 UTP20 -439873 sc-eQTL 2.76e-01 -0.093 0.0852 0.62 Treg L2
ENSG00000120805 ARL1 -567540 sc-eQTL 6.34e-01 -0.0421 0.0883 0.62 Treg L2
ENSG00000136021 SCYL2 573092 sc-eQTL 7.19e-01 0.0292 0.081 0.62 Treg L2
ENSG00000075089 ACTR6 641110 sc-eQTL 2.22e-01 -0.106 0.0862 0.617 cDC L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 2.63e-01 -0.102 0.0907 0.617 cDC L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.21e-01 0.0635 0.0789 0.617 cDC L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 9.22e-01 0.00999 0.102 0.617 cDC L2
ENSG00000120800 UTP20 -439873 sc-eQTL 6.51e-02 0.17 0.0915 0.617 cDC L2
ENSG00000120805 ARL1 -567540 sc-eQTL 8.02e-01 -0.0241 0.0958 0.617 cDC L2
ENSG00000136021 SCYL2 573092 sc-eQTL 4.88e-01 0.0602 0.0867 0.617 cDC L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 4.23e-01 -0.0687 0.0855 0.617 cDC L2
ENSG00000075089 ACTR6 641110 sc-eQTL 6.77e-01 -0.0312 0.0746 0.62 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.34e-01 0.0204 0.06 0.62 cMono_IL1B L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 5.59e-01 -0.0344 0.0589 0.62 cMono_IL1B L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.03e-01 0.0407 0.0781 0.62 cMono_IL1B L2
ENSG00000120800 UTP20 -439873 sc-eQTL 2.64e-01 -0.0982 0.0877 0.62 cMono_IL1B L2
ENSG00000120805 ARL1 -567540 sc-eQTL 3.30e-02 0.167 0.0779 0.62 cMono_IL1B L2
ENSG00000136021 SCYL2 573092 sc-eQTL 8.41e-01 0.0146 0.0728 0.62 cMono_IL1B L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 4.43e-02 0.127 0.0628 0.62 cMono_IL1B L2
ENSG00000075089 ACTR6 641110 sc-eQTL 7.59e-01 -0.0254 0.0828 0.62 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.65e-01 0.0233 0.0778 0.62 cMono_S100A L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.48e-01 -0.0124 0.0644 0.62 cMono_S100A L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 8.94e-01 0.0104 0.0784 0.62 cMono_S100A L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.07e-01 0.0938 0.0916 0.62 cMono_S100A L2
ENSG00000120805 ARL1 -567540 sc-eQTL 2.58e-01 -0.0975 0.086 0.62 cMono_S100A L2
ENSG00000136021 SCYL2 573092 sc-eQTL 6.19e-01 -0.0392 0.0786 0.62 cMono_S100A L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 7.77e-01 0.0221 0.0779 0.62 cMono_S100A L2
ENSG00000075089 ACTR6 641110 sc-eQTL 9.69e-01 0.00411 0.107 0.612 gdT L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 3.63e-01 -0.0976 0.107 0.612 gdT L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 8.75e-01 -0.016 0.102 0.612 gdT L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 3.80e-01 0.0674 0.0765 0.612 gdT L2
ENSG00000120800 UTP20 -439873 sc-eQTL 8.25e-01 -0.0225 0.101 0.612 gdT L2
ENSG00000120805 ARL1 -567540 sc-eQTL 6.84e-01 0.0434 0.106 0.612 gdT L2
ENSG00000136021 SCYL2 573092 sc-eQTL 7.08e-01 0.0407 0.108 0.612 gdT L2
ENSG00000075089 ACTR6 641110 sc-eQTL 8.63e-01 -0.0155 0.0901 0.618 intMono L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 4.39e-01 -0.0711 0.0916 0.618 intMono L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 2.95e-01 0.0831 0.0792 0.618 intMono L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 5.57e-01 -0.0549 0.0932 0.618 intMono L2
ENSG00000120800 UTP20 -439873 sc-eQTL 5.03e-01 -0.0585 0.0872 0.618 intMono L2
ENSG00000120805 ARL1 -567540 sc-eQTL 7.77e-02 0.159 0.0896 0.618 intMono L2
ENSG00000136021 SCYL2 573092 sc-eQTL 4.14e-01 0.0747 0.0913 0.618 intMono L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 6.33e-02 0.156 0.0837 0.618 intMono L2
ENSG00000075089 ACTR6 641110 sc-eQTL 4.93e-01 0.0581 0.0847 0.618 ncMono L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 8.59e-01 -0.0149 0.0841 0.618 ncMono L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 7.78e-01 0.0224 0.0791 0.618 ncMono L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 2.55e-01 -0.108 0.0945 0.618 ncMono L2
ENSG00000120800 UTP20 -439873 sc-eQTL 8.79e-01 -0.0126 0.0829 0.618 ncMono L2
ENSG00000120805 ARL1 -567540 sc-eQTL 8.85e-01 -0.0115 0.0797 0.618 ncMono L2
ENSG00000136021 SCYL2 573092 sc-eQTL 1.05e-01 -0.141 0.0865 0.618 ncMono L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 2.35e-01 -0.088 0.0739 0.618 ncMono L2
ENSG00000075089 ACTR6 641110 sc-eQTL 6.75e-01 0.0393 0.0936 0.63 pDC L2
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.41e-01 -0.0553 0.0903 0.63 pDC L2
ENSG00000111666 CHPT1 -856715 sc-eQTL 5.23e-02 0.172 0.0881 0.63 pDC L2
ENSG00000111670 GNPTAB -990727 sc-eQTL 7.09e-01 -0.0353 0.0944 0.63 pDC L2
ENSG00000120800 UTP20 -439873 sc-eQTL 3.77e-01 0.083 0.0938 0.63 pDC L2
ENSG00000120805 ARL1 -567540 sc-eQTL 9.64e-01 -0.00447 0.0989 0.63 pDC L2
ENSG00000136021 SCYL2 573092 sc-eQTL 7.67e-01 0.0292 0.0983 0.63 pDC L2
ENSG00000139354 GAS2L3 266549 sc-eQTL 1.07e-01 -0.128 0.079 0.63 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 641110 sc-eQTL 4.89e-01 0.0579 0.0835 0.62 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 8.41e-01 0.0168 0.0834 0.62 B_Memory LOneK1K
ENSG00000111666 CHPT1 -856715 sc-eQTL 9.52e-02 0.0742 0.0443 0.62 B_Memory LOneK1K
ENSG00000111670 GNPTAB -990727 sc-eQTL 6.23e-01 0.0344 0.07 0.62 B_Memory LOneK1K
ENSG00000120800 UTP20 -439873 sc-eQTL 9.14e-01 0.00782 0.0721 0.62 B_Memory LOneK1K
ENSG00000120805 ARL1 -567540 sc-eQTL 4.95e-02 0.16 0.0808 0.62 B_Memory LOneK1K
ENSG00000136021 SCYL2 573092 sc-eQTL 5.47e-01 0.0394 0.0653 0.62 B_Memory LOneK1K
ENSG00000139351 SYCP3 -899240 sc-eQTL 2.91e-01 0.0888 0.0838 0.62 B_Memory LOneK1K
ENSG00000075089 ACTR6 641110 sc-eQTL 1.79e-01 -0.105 0.0782 0.62 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.72e-01 0.0403 0.0713 0.62 B_Naive LOneK1K
ENSG00000111666 CHPT1 -856715 sc-eQTL 9.13e-03 0.102 0.0389 0.62 B_Naive LOneK1K
ENSG00000111670 GNPTAB -990727 sc-eQTL 4.33e-01 0.0444 0.0565 0.62 B_Naive LOneK1K
ENSG00000120800 UTP20 -439873 sc-eQTL 1.19e-01 0.108 0.0689 0.62 B_Naive LOneK1K
ENSG00000120805 ARL1 -567540 sc-eQTL 6.06e-01 0.0408 0.079 0.62 B_Naive LOneK1K
ENSG00000136021 SCYL2 573092 sc-eQTL 8.47e-01 -0.0136 0.0704 0.62 B_Naive LOneK1K
ENSG00000139351 SYCP3 -899240 sc-eQTL 4.09e-01 0.074 0.0894 0.62 B_Naive LOneK1K
ENSG00000075089 ACTR6 641110 sc-eQTL 4.92e-01 -0.0497 0.0723 0.62 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 9.28e-01 0.00521 0.0573 0.62 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -856715 sc-eQTL 5.27e-01 -0.0367 0.0579 0.62 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -990727 sc-eQTL 9.41e-01 0.00557 0.0746 0.62 CD14_Mono LOneK1K
ENSG00000120800 UTP20 -439873 sc-eQTL 9.40e-01 -0.00669 0.0882 0.62 CD14_Mono LOneK1K
ENSG00000120805 ARL1 -567540 sc-eQTL 3.60e-01 0.069 0.0753 0.62 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 573092 sc-eQTL 9.30e-01 -0.00563 0.0645 0.62 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 266549 sc-eQTL 5.52e-02 0.118 0.0613 0.62 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 641110 sc-eQTL 9.24e-01 0.00812 0.0854 0.616 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 7.82e-01 -0.0221 0.08 0.616 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.79e-01 0.0512 0.0722 0.616 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -990727 sc-eQTL 3.70e-01 -0.0784 0.0873 0.616 CD16_Mono LOneK1K
ENSG00000120800 UTP20 -439873 sc-eQTL 3.91e-01 -0.0722 0.084 0.616 CD16_Mono LOneK1K
ENSG00000120805 ARL1 -567540 sc-eQTL 3.41e-01 0.0796 0.0834 0.616 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 573092 sc-eQTL 6.54e-01 -0.0355 0.0791 0.616 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 266549 sc-eQTL 4.84e-01 -0.0534 0.0763 0.616 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 641110 sc-eQTL 4.82e-01 -0.0482 0.0685 0.616 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 697358 sc-eQTL 5.40e-01 -0.0353 0.0576 0.616 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -856715 sc-eQTL 4.33e-01 0.0594 0.0757 0.616 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -990727 sc-eQTL 1.19e-01 0.0808 0.0516 0.616 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 -439873 sc-eQTL 1.23e-01 0.123 0.0792 0.616 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 -567540 sc-eQTL 5.08e-01 0.0489 0.0738 0.616 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 573092 sc-eQTL 1.02e-01 -0.0951 0.058 0.616 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -856715 eQTL 1.46e-02 -0.0636 0.026 0.0 0.0 0.362

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina