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Genes within 1Mb (chr12:100743792:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 544670 sc-eQTL 1.69e-01 0.0946 0.0685 0.474 B L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 8.82e-01 0.00865 0.0584 0.474 B L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.25e-01 0.0034 0.0362 0.474 B L1
ENSG00000120800 UTP20 -536313 sc-eQTL 6.26e-02 -0.111 0.0591 0.474 B L1
ENSG00000120805 ARL1 -663980 sc-eQTL 5.53e-01 0.0304 0.0512 0.474 B L1
ENSG00000136021 SCYL2 476652 sc-eQTL 5.54e-01 0.0345 0.0581 0.474 B L1
ENSG00000139351 SYCP3 -995680 sc-eQTL 2.56e-01 0.0838 0.0737 0.474 B L1
ENSG00000075089 ACTR6 544670 sc-eQTL 7.70e-01 -0.0156 0.0534 0.474 CD4T L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.42e-01 0.0164 0.0497 0.474 CD4T L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 6.49e-01 -0.0339 0.0742 0.474 CD4T L1
ENSG00000120800 UTP20 -536313 sc-eQTL 3.28e-01 -0.0557 0.0568 0.474 CD4T L1
ENSG00000120805 ARL1 -663980 sc-eQTL 3.14e-01 -0.0561 0.0556 0.474 CD4T L1
ENSG00000136021 SCYL2 476652 sc-eQTL 7.52e-01 -0.0135 0.0425 0.474 CD4T L1
ENSG00000075089 ACTR6 544670 sc-eQTL 7.98e-01 -0.0149 0.0583 0.474 CD8T L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 3.30e-01 -0.0562 0.0576 0.474 CD8T L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 8.27e-01 0.0159 0.0729 0.474 CD8T L1
ENSG00000120800 UTP20 -536313 sc-eQTL 2.09e-01 -0.0758 0.0602 0.474 CD8T L1
ENSG00000120805 ARL1 -663980 sc-eQTL 7.42e-01 -0.022 0.0667 0.474 CD8T L1
ENSG00000136021 SCYL2 476652 sc-eQTL 6.16e-01 -0.0271 0.054 0.474 CD8T L1
ENSG00000075089 ACTR6 544670 sc-eQTL 4.41e-01 -0.0584 0.0757 0.482 DC L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.50e-01 -0.0438 0.0731 0.482 DC L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 5.91e-01 0.0372 0.0692 0.482 DC L1
ENSG00000120800 UTP20 -536313 sc-eQTL 8.05e-01 0.0202 0.0816 0.482 DC L1
ENSG00000120805 ARL1 -663980 sc-eQTL 8.15e-01 0.0197 0.0844 0.482 DC L1
ENSG00000136021 SCYL2 476652 sc-eQTL 5.24e-01 0.0517 0.081 0.482 DC L1
ENSG00000139354 GAS2L3 170109 sc-eQTL 9.42e-01 0.00551 0.0754 0.482 DC L1
ENSG00000075089 ACTR6 544670 sc-eQTL 8.61e-01 0.0118 0.0672 0.474 Mono L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 9.63e-01 -0.00257 0.0552 0.474 Mono L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.88e-01 -0.0463 0.0536 0.474 Mono L1
ENSG00000120800 UTP20 -536313 sc-eQTL 8.11e-01 0.018 0.075 0.474 Mono L1
ENSG00000120805 ARL1 -663980 sc-eQTL 3.73e-01 -0.0615 0.0689 0.474 Mono L1
ENSG00000136021 SCYL2 476652 sc-eQTL 3.52e-01 -0.0537 0.0575 0.474 Mono L1
ENSG00000139354 GAS2L3 170109 sc-eQTL 2.55e-01 0.0613 0.0537 0.474 Mono L1
ENSG00000075089 ACTR6 544670 sc-eQTL 1.35e-01 0.092 0.0613 0.474 NK L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 3.53e-01 -0.0473 0.0508 0.474 NK L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 6.80e-01 0.0262 0.0634 0.474 NK L1
ENSG00000120800 UTP20 -536313 sc-eQTL 1.42e-02 -0.18 0.0729 0.474 NK L1
ENSG00000120805 ARL1 -663980 sc-eQTL 7.99e-01 -0.0173 0.068 0.474 NK L1
ENSG00000136021 SCYL2 476652 sc-eQTL 7.67e-01 0.0155 0.0523 0.474 NK L1
ENSG00000075089 ACTR6 544670 sc-eQTL 1.13e-01 0.118 0.0741 0.474 Other_T L1
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.55e-01 -0.0418 0.0707 0.474 Other_T L1
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.19e-01 -0.00736 0.0727 0.474 Other_T L1
ENSG00000120800 UTP20 -536313 sc-eQTL 1.84e-01 -0.109 0.0816 0.474 Other_T L1
ENSG00000120805 ARL1 -663980 sc-eQTL 7.94e-01 -0.0156 0.0597 0.474 Other_T L1
ENSG00000136021 SCYL2 476652 sc-eQTL 6.74e-01 0.0275 0.0652 0.474 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 544670 sc-eQTL 5.50e-01 -0.0551 0.0919 0.482 B_Activated L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.02e-01 0.0661 0.0982 0.482 B_Activated L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 1.29e-01 0.0968 0.0635 0.482 B_Activated L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.40e-01 -0.0839 0.0876 0.482 B_Activated L2
ENSG00000120805 ARL1 -663980 sc-eQTL 2.42e-01 0.106 0.0904 0.482 B_Activated L2
ENSG00000136021 SCYL2 476652 sc-eQTL 7.23e-01 0.0329 0.0925 0.482 B_Activated L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 6.85e-01 0.029 0.0713 0.482 B_Activated L2
ENSG00000075089 ACTR6 544670 sc-eQTL 2.39e-02 0.18 0.0793 0.476 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.03e-01 0.0327 0.0856 0.476 B_Intermediate L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.49e-01 0.0437 0.0465 0.476 B_Intermediate L2
ENSG00000120800 UTP20 -536313 sc-eQTL 1.65e-01 -0.106 0.0762 0.476 B_Intermediate L2
ENSG00000120805 ARL1 -663980 sc-eQTL 2.54e-01 0.0983 0.0859 0.476 B_Intermediate L2
ENSG00000136021 SCYL2 476652 sc-eQTL 1.97e-01 -0.0906 0.0699 0.476 B_Intermediate L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 8.15e-01 0.0188 0.0803 0.476 B_Intermediate L2
ENSG00000075089 ACTR6 544670 sc-eQTL 4.76e-01 -0.061 0.0855 0.472 B_Memory L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.05e-01 0.055 0.0825 0.472 B_Memory L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 7.26e-01 -0.0193 0.055 0.472 B_Memory L2
ENSG00000120800 UTP20 -536313 sc-eQTL 2.30e-01 -0.0992 0.0824 0.472 B_Memory L2
ENSG00000120805 ARL1 -663980 sc-eQTL 7.44e-01 0.0269 0.0822 0.472 B_Memory L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.62e-01 0.0435 0.0748 0.472 B_Memory L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 5.20e-01 0.0512 0.0793 0.472 B_Memory L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.21e-01 0.0168 0.0743 0.474 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 9.05e-01 -0.00854 0.0712 0.474 B_Naive1 L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 4.70e-01 0.0296 0.0409 0.474 B_Naive1 L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.12e-02 -0.147 0.068 0.474 B_Naive1 L2
ENSG00000120805 ARL1 -663980 sc-eQTL 6.88e-01 -0.0308 0.0767 0.474 B_Naive1 L2
ENSG00000136021 SCYL2 476652 sc-eQTL 8.38e-01 -0.0137 0.0673 0.474 B_Naive1 L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 6.47e-01 0.0392 0.0854 0.474 B_Naive1 L2
ENSG00000075089 ACTR6 544670 sc-eQTL 7.03e-01 0.0324 0.0849 0.474 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 6.16e-01 0.0409 0.0813 0.474 B_Naive2 L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.72e-01 0.0379 0.0424 0.474 B_Naive2 L2
ENSG00000120800 UTP20 -536313 sc-eQTL 1.44e-01 -0.111 0.0759 0.474 B_Naive2 L2
ENSG00000120805 ARL1 -663980 sc-eQTL 6.03e-01 -0.0436 0.0836 0.474 B_Naive2 L2
ENSG00000136021 SCYL2 476652 sc-eQTL 4.18e-01 0.0644 0.0794 0.474 B_Naive2 L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 7.27e-01 -0.0266 0.076 0.474 B_Naive2 L2
ENSG00000075089 ACTR6 544670 sc-eQTL 5.90e-01 0.0445 0.0825 0.477 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 6.85e-01 0.0332 0.0818 0.477 CD4_CTL L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 8.74e-01 -0.0131 0.0825 0.477 CD4_CTL L2
ENSG00000120800 UTP20 -536313 sc-eQTL 4.33e-01 0.0623 0.0792 0.477 CD4_CTL L2
ENSG00000120805 ARL1 -663980 sc-eQTL 5.78e-01 -0.0468 0.084 0.477 CD4_CTL L2
ENSG00000136021 SCYL2 476652 sc-eQTL 4.64e-01 0.0592 0.0806 0.477 CD4_CTL L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.69e-01 -0.0101 0.0612 0.474 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 9.39e-01 0.00444 0.0578 0.474 CD4_Naive L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 5.47e-01 -0.0442 0.0731 0.474 CD4_Naive L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.55e-01 -0.0569 0.0613 0.474 CD4_Naive L2
ENSG00000120805 ARL1 -663980 sc-eQTL 9.19e-01 -0.00676 0.0666 0.474 CD4_Naive L2
ENSG00000136021 SCYL2 476652 sc-eQTL 9.68e-01 0.00204 0.0513 0.474 CD4_Naive L2
ENSG00000075089 ACTR6 544670 sc-eQTL 9.44e-01 0.00457 0.0655 0.474 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 4.74e-02 0.136 0.0682 0.474 CD4_TCM L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 5.55e-01 -0.0454 0.0767 0.474 CD4_TCM L2
ENSG00000120800 UTP20 -536313 sc-eQTL 7.87e-01 0.0201 0.0744 0.474 CD4_TCM L2
ENSG00000120805 ARL1 -663980 sc-eQTL 1.65e-01 -0.0966 0.0693 0.474 CD4_TCM L2
ENSG00000136021 SCYL2 476652 sc-eQTL 6.92e-02 -0.106 0.058 0.474 CD4_TCM L2
ENSG00000075089 ACTR6 544670 sc-eQTL 3.65e-01 -0.0686 0.0756 0.474 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 2.87e-02 -0.163 0.0742 0.474 CD4_TEM L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 5.84e-01 -0.0413 0.0755 0.474 CD4_TEM L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.55e-01 -0.0728 0.0785 0.474 CD4_TEM L2
ENSG00000120805 ARL1 -663980 sc-eQTL 9.45e-01 0.00515 0.0743 0.474 CD4_TEM L2
ENSG00000136021 SCYL2 476652 sc-eQTL 8.24e-01 0.017 0.0762 0.474 CD4_TEM L2
ENSG00000075089 ACTR6 544670 sc-eQTL 1.54e-01 0.0944 0.066 0.474 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 8.95e-01 -0.00902 0.0679 0.474 CD8_CTL L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.53e-01 -0.00429 0.0723 0.474 CD8_CTL L2
ENSG00000120800 UTP20 -536313 sc-eQTL 5.05e-01 -0.0522 0.0782 0.474 CD8_CTL L2
ENSG00000120805 ARL1 -663980 sc-eQTL 3.54e-01 0.0717 0.0772 0.474 CD8_CTL L2
ENSG00000136021 SCYL2 476652 sc-eQTL 4.44e-01 0.0513 0.0669 0.474 CD8_CTL L2
ENSG00000075089 ACTR6 544670 sc-eQTL 6.15e-02 -0.126 0.0673 0.474 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 4.17e-02 -0.148 0.0721 0.474 CD8_Naive L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.86e-01 -0.0658 0.0756 0.474 CD8_Naive L2
ENSG00000120800 UTP20 -536313 sc-eQTL 5.92e-01 0.0388 0.0723 0.474 CD8_Naive L2
ENSG00000120805 ARL1 -663980 sc-eQTL 4.58e-01 -0.0584 0.0785 0.474 CD8_Naive L2
ENSG00000136021 SCYL2 476652 sc-eQTL 9.88e-01 0.000999 0.0647 0.474 CD8_Naive L2
ENSG00000075089 ACTR6 544670 sc-eQTL 5.52e-01 0.047 0.079 0.481 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.03e-01 0.0323 0.0845 0.481 CD8_TCM L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 2.63e-01 -0.0826 0.0736 0.481 CD8_TCM L2
ENSG00000120800 UTP20 -536313 sc-eQTL 1.57e-01 -0.118 0.0829 0.481 CD8_TCM L2
ENSG00000120805 ARL1 -663980 sc-eQTL 4.48e-01 0.0621 0.0817 0.481 CD8_TCM L2
ENSG00000136021 SCYL2 476652 sc-eQTL 2.78e-01 -0.0909 0.0835 0.481 CD8_TCM L2
ENSG00000075089 ACTR6 544670 sc-eQTL 3.24e-01 0.08 0.0809 0.475 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.09e-02 0.169 0.0862 0.475 CD8_TEM L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.67e-01 0.0702 0.0777 0.475 CD8_TEM L2
ENSG00000120800 UTP20 -536313 sc-eQTL 6.68e-01 -0.0384 0.0894 0.475 CD8_TEM L2
ENSG00000120805 ARL1 -663980 sc-eQTL 8.52e-01 0.0159 0.0855 0.475 CD8_TEM L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.67e-01 0.0509 0.0888 0.475 CD8_TEM L2
ENSG00000075089 ACTR6 544670 sc-eQTL 7.50e-01 -0.0265 0.0828 0.474 MAIT L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.88e-01 -0.0206 0.0767 0.474 MAIT L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 8.30e-01 -0.0168 0.0783 0.474 MAIT L2
ENSG00000120800 UTP20 -536313 sc-eQTL 8.14e-01 0.0195 0.0832 0.474 MAIT L2
ENSG00000120805 ARL1 -663980 sc-eQTL 4.23e-01 -0.068 0.0847 0.474 MAIT L2
ENSG00000136021 SCYL2 476652 sc-eQTL 1.64e-01 0.1 0.0717 0.474 MAIT L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.52e-01 0.0152 0.0811 0.476 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 1.28e-01 -0.118 0.0773 0.476 NK_CD56bright L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.25e-01 0.062 0.0629 0.476 NK_CD56bright L2
ENSG00000120800 UTP20 -536313 sc-eQTL 1.39e-01 -0.126 0.0846 0.476 NK_CD56bright L2
ENSG00000120805 ARL1 -663980 sc-eQTL 8.15e-01 0.0195 0.0831 0.476 NK_CD56bright L2
ENSG00000136021 SCYL2 476652 sc-eQTL 7.16e-01 0.0285 0.0781 0.476 NK_CD56bright L2
ENSG00000075089 ACTR6 544670 sc-eQTL 4.47e-02 0.146 0.0725 0.474 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 1.87e-01 0.0825 0.0622 0.474 NK_CD56dim L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.13e-01 -0.00816 0.0744 0.474 NK_CD56dim L2
ENSG00000120800 UTP20 -536313 sc-eQTL 2.19e-01 -0.0961 0.0779 0.474 NK_CD56dim L2
ENSG00000120805 ARL1 -663980 sc-eQTL 7.20e-01 -0.0271 0.0756 0.474 NK_CD56dim L2
ENSG00000136021 SCYL2 476652 sc-eQTL 6.51e-01 -0.0299 0.066 0.474 NK_CD56dim L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.40e-01 0.0171 0.0846 0.461 NK_HLA L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.46e-02 -0.152 0.0846 0.461 NK_HLA L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 6.36e-01 0.039 0.0822 0.461 NK_HLA L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.03e-01 -0.089 0.0862 0.461 NK_HLA L2
ENSG00000120805 ARL1 -663980 sc-eQTL 9.37e-01 -0.00696 0.0883 0.461 NK_HLA L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.69e-02 0.166 0.0864 0.461 NK_HLA L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.62e-01 -0.0126 0.0725 0.474 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 2.67e-01 -0.0749 0.0673 0.474 NK_cytokine L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 6.75e-01 0.0299 0.0713 0.474 NK_cytokine L2
ENSG00000120800 UTP20 -536313 sc-eQTL 6.26e-02 -0.14 0.0749 0.474 NK_cytokine L2
ENSG00000120805 ARL1 -663980 sc-eQTL 6.76e-01 0.0318 0.0759 0.474 NK_cytokine L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.49e-01 -0.0381 0.0635 0.474 NK_cytokine L2
ENSG00000075089 ACTR6 544670 sc-eQTL 4.39e-01 -0.0886 0.114 0.478 PB L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 1.44e-01 -0.161 0.109 0.478 PB L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 7.87e-01 -0.0184 0.0679 0.478 PB L2
ENSG00000120800 UTP20 -536313 sc-eQTL 7.24e-01 0.0398 0.112 0.478 PB L2
ENSG00000120805 ARL1 -663980 sc-eQTL 9.99e-01 -0.000124 0.0689 0.478 PB L2
ENSG00000136021 SCYL2 476652 sc-eQTL 8.56e-01 0.0214 0.117 0.478 PB L2
ENSG00000139351 SYCP3 -995680 sc-eQTL 3.46e-02 0.197 0.0919 0.478 PB L2
ENSG00000075089 ACTR6 544670 sc-eQTL 4.52e-01 -0.0618 0.0821 0.474 Pro_T L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 9.31e-01 -0.00712 0.082 0.474 Pro_T L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 2.68e-01 0.0833 0.0749 0.474 Pro_T L2
ENSG00000120800 UTP20 -536313 sc-eQTL 6.80e-02 -0.144 0.0787 0.474 Pro_T L2
ENSG00000120805 ARL1 -663980 sc-eQTL 7.44e-01 0.0196 0.06 0.474 Pro_T L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.76e-01 -0.0449 0.08 0.474 Pro_T L2
ENSG00000075089 ACTR6 544670 sc-eQTL 7.13e-01 -0.029 0.0789 0.474 Treg L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 1.47e-01 -0.117 0.0804 0.474 Treg L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 1.60e-01 -0.119 0.0843 0.474 Treg L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.78e-01 -0.0711 0.0804 0.474 Treg L2
ENSG00000120805 ARL1 -663980 sc-eQTL 5.18e-03 -0.231 0.0818 0.474 Treg L2
ENSG00000136021 SCYL2 476652 sc-eQTL 7.59e-02 0.135 0.0759 0.474 Treg L2
ENSG00000075089 ACTR6 544670 sc-eQTL 9.76e-01 0.00251 0.0823 0.478 cDC L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.41e-01 -0.0286 0.0865 0.478 cDC L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 1.66e-01 -0.104 0.0747 0.478 cDC L2
ENSG00000120800 UTP20 -536313 sc-eQTL 9.15e-01 0.00939 0.0879 0.478 cDC L2
ENSG00000120805 ARL1 -663980 sc-eQTL 8.81e-01 -0.0137 0.0911 0.478 cDC L2
ENSG00000136021 SCYL2 476652 sc-eQTL 3.43e-01 0.0782 0.0823 0.478 cDC L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 5.07e-01 0.0541 0.0814 0.478 cDC L2
ENSG00000075089 ACTR6 544670 sc-eQTL 7.19e-01 -0.025 0.0696 0.474 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 8.48e-01 -0.0108 0.0559 0.474 cMono_IL1B L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 2.86e-01 -0.0586 0.0548 0.474 cMono_IL1B L2
ENSG00000120800 UTP20 -536313 sc-eQTL 1.32e-01 -0.123 0.0815 0.474 cMono_IL1B L2
ENSG00000120805 ARL1 -663980 sc-eQTL 8.33e-01 -0.0155 0.0734 0.474 cMono_IL1B L2
ENSG00000136021 SCYL2 476652 sc-eQTL 9.83e-01 0.00147 0.0678 0.474 cMono_IL1B L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 9.87e-01 0.000933 0.0591 0.474 cMono_IL1B L2
ENSG00000075089 ACTR6 544670 sc-eQTL 3.79e-01 0.0675 0.0766 0.474 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.18e-01 -0.0261 0.0721 0.474 cMono_S100A L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 6.91e-01 -0.0238 0.0597 0.474 cMono_S100A L2
ENSG00000120800 UTP20 -536313 sc-eQTL 9.88e-02 0.14 0.0846 0.474 cMono_S100A L2
ENSG00000120805 ARL1 -663980 sc-eQTL 9.32e-02 -0.134 0.0794 0.474 cMono_S100A L2
ENSG00000136021 SCYL2 476652 sc-eQTL 5.34e-02 -0.14 0.0723 0.474 cMono_S100A L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 2.46e-01 0.0837 0.072 0.474 cMono_S100A L2
ENSG00000075089 ACTR6 544670 sc-eQTL 8.36e-01 0.0204 0.0986 0.473 gdT L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.99e-01 -0.0253 0.0991 0.473 gdT L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.52e-01 -0.00564 0.0942 0.473 gdT L2
ENSG00000120800 UTP20 -536313 sc-eQTL 2.69e-01 0.104 0.0934 0.473 gdT L2
ENSG00000120805 ARL1 -663980 sc-eQTL 7.69e-01 -0.0289 0.0983 0.473 gdT L2
ENSG00000136021 SCYL2 476652 sc-eQTL 2.08e-01 -0.126 0.0997 0.473 gdT L2
ENSG00000075089 ACTR6 544670 sc-eQTL 1.15e-01 -0.129 0.0818 0.482 intMono L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 6.75e-01 0.0352 0.0837 0.482 intMono L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 8.09e-01 0.0175 0.0724 0.482 intMono L2
ENSG00000120800 UTP20 -536313 sc-eQTL 3.70e-01 0.0714 0.0795 0.482 intMono L2
ENSG00000120805 ARL1 -663980 sc-eQTL 5.57e-01 -0.0485 0.0824 0.482 intMono L2
ENSG00000136021 SCYL2 476652 sc-eQTL 3.83e-01 0.0729 0.0833 0.482 intMono L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 2.99e-01 0.08 0.0769 0.482 intMono L2
ENSG00000075089 ACTR6 544670 sc-eQTL 4.47e-01 0.0595 0.078 0.484 ncMono L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 4.72e-01 0.0558 0.0773 0.484 ncMono L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 4.21e-01 0.0587 0.0727 0.484 ncMono L2
ENSG00000120800 UTP20 -536313 sc-eQTL 4.55e-01 -0.057 0.0762 0.484 ncMono L2
ENSG00000120805 ARL1 -663980 sc-eQTL 6.23e-01 -0.0361 0.0733 0.484 ncMono L2
ENSG00000136021 SCYL2 476652 sc-eQTL 4.21e-01 -0.0645 0.08 0.484 ncMono L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 5.64e-01 -0.0395 0.0682 0.484 ncMono L2
ENSG00000075089 ACTR6 544670 sc-eQTL 3.27e-01 0.0864 0.088 0.472 pDC L2
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 9.16e-01 -0.00902 0.0852 0.472 pDC L2
ENSG00000111666 CHPT1 -953155 sc-eQTL 7.07e-01 0.0316 0.084 0.472 pDC L2
ENSG00000120800 UTP20 -536313 sc-eQTL 2.94e-02 0.192 0.0872 0.472 pDC L2
ENSG00000120805 ARL1 -663980 sc-eQTL 5.64e-01 0.0538 0.0931 0.472 pDC L2
ENSG00000136021 SCYL2 476652 sc-eQTL 8.38e-02 0.16 0.0917 0.472 pDC L2
ENSG00000139354 GAS2L3 170109 sc-eQTL 1.36e-01 -0.112 0.0745 0.472 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 544670 sc-eQTL 5.69e-01 0.0452 0.0792 0.474 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 5.47e-01 0.0477 0.079 0.474 B_Memory LOneK1K
ENSG00000111666 CHPT1 -953155 sc-eQTL 9.68e-01 0.00171 0.0422 0.474 B_Memory LOneK1K
ENSG00000120800 UTP20 -536313 sc-eQTL 1.69e-01 -0.0939 0.068 0.474 B_Memory LOneK1K
ENSG00000120805 ARL1 -663980 sc-eQTL 1.98e-01 0.0995 0.077 0.474 B_Memory LOneK1K
ENSG00000136021 SCYL2 476652 sc-eQTL 5.60e-01 -0.0361 0.0618 0.474 B_Memory LOneK1K
ENSG00000139351 SYCP3 -995680 sc-eQTL 1.91e-01 0.104 0.0793 0.474 B_Memory LOneK1K
ENSG00000075089 ACTR6 544670 sc-eQTL 5.08e-01 0.0491 0.0741 0.474 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 8.98e-01 0.00864 0.0674 0.474 B_Naive LOneK1K
ENSG00000111666 CHPT1 -953155 sc-eQTL 5.33e-01 0.0233 0.0373 0.474 B_Naive LOneK1K
ENSG00000120800 UTP20 -536313 sc-eQTL 3.07e-02 -0.141 0.0647 0.474 B_Naive LOneK1K
ENSG00000120805 ARL1 -663980 sc-eQTL 8.50e-01 -0.0141 0.0746 0.474 B_Naive LOneK1K
ENSG00000136021 SCYL2 476652 sc-eQTL 3.26e-01 0.0652 0.0663 0.474 B_Naive LOneK1K
ENSG00000139351 SYCP3 -995680 sc-eQTL 3.71e-01 0.0757 0.0844 0.474 B_Naive LOneK1K
ENSG00000075089 ACTR6 544670 sc-eQTL 7.83e-01 0.0186 0.0675 0.474 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 8.32e-01 -0.0114 0.0535 0.474 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.27e-01 -0.0531 0.054 0.474 CD14_Mono LOneK1K
ENSG00000120800 UTP20 -536313 sc-eQTL 6.72e-01 0.0349 0.0823 0.474 CD14_Mono LOneK1K
ENSG00000120805 ARL1 -663980 sc-eQTL 3.01e-01 -0.0728 0.0702 0.474 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 476652 sc-eQTL 3.34e-01 -0.0581 0.06 0.474 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 170109 sc-eQTL 8.09e-01 0.014 0.0577 0.474 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 544670 sc-eQTL 4.51e-01 -0.0594 0.0787 0.474 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 2.31e-01 0.0883 0.0736 0.474 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -953155 sc-eQTL 3.54e-01 0.0618 0.0665 0.474 CD16_Mono LOneK1K
ENSG00000120800 UTP20 -536313 sc-eQTL 7.89e-01 0.0208 0.0776 0.474 CD16_Mono LOneK1K
ENSG00000120805 ARL1 -663980 sc-eQTL 8.18e-01 -0.0178 0.0771 0.474 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 476652 sc-eQTL 9.17e-01 -0.00766 0.0731 0.474 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 170109 sc-eQTL 3.10e-01 0.0716 0.0703 0.474 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 544670 sc-eQTL 1.12e-01 0.102 0.0636 0.474 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 600918 sc-eQTL 7.60e-01 -0.0164 0.0538 0.474 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -953155 sc-eQTL 7.09e-01 0.0264 0.0707 0.474 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 -536313 sc-eQTL 9.76e-02 -0.123 0.0738 0.474 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 -663980 sc-eQTL 7.76e-01 -0.0196 0.069 0.474 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 476652 sc-eQTL 9.08e-01 0.00627 0.0544 0.474 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 -953155 eQTL 1.85e-05 -0.104 0.0242 0.0 0.0 0.499

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 -953155 2.67e-07 1.1e-07 3.65e-08 1.79e-07 9.02e-08 9.57e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.59e-07 7.75e-08 1.3e-07 6.21e-08 5.55e-08 7.5e-08 4.63e-08 1.14e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.26e-07 4.26e-08 1.31e-07 1.15e-07 1.12e-07 8.71e-08 1.02e-07 1.1e-07 9.73e-08 4.1e-08 2.91e-08 8.82e-08 9.07e-08 3.97e-08 4.63e-08 9.25e-08 8e-08 3.01e-08 4.36e-08 1.33e-07 3.93e-08 3.48e-08 7.79e-08 1.7e-08 1.26e-07 4.2e-09 5.04e-08