logo

Genes within 1Mb (chr12:100173460:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -25662 sc-eQTL 5.05e-01 0.0514 0.0769 0.402 B L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 4.37e-01 0.0507 0.0652 0.402 B L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.73e-01 -0.0367 0.065 0.402 B L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 4.99e-02 0.113 0.0575 0.402 CD4T L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 8.69e-01 -0.00892 0.054 0.402 CD4T L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 9.64e-01 -0.00208 0.0462 0.402 CD4T L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.15e-02 0.162 0.0637 0.402 CD8T L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 3.97e-01 0.0543 0.0639 0.402 CD8T L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 2.48e-01 0.0693 0.0598 0.402 CD8T L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 7.19e-02 0.154 0.0852 0.399 DC L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 6.00e-01 0.0435 0.0828 0.399 DC L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 4.08e-01 -0.076 0.0917 0.399 DC L1
ENSG00000139354 GAS2L3 -400223 sc-eQTL 3.22e-01 -0.0845 0.0851 0.399 DC L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.34e-01 0.016 0.0762 0.402 Mono L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 2.93e-01 -0.0659 0.0625 0.402 Mono L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.78e-01 0.0364 0.0653 0.402 Mono L1
ENSG00000139354 GAS2L3 -400223 sc-eQTL 7.76e-01 -0.0174 0.0611 0.402 Mono L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 5.11e-01 -0.0456 0.0693 0.399 NK L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 2.21e-01 0.07 0.057 0.399 NK L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.78e-01 0.0245 0.0589 0.399 NK L1
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.62e-01 0.0146 0.0835 0.402 Other_T L1
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.92e-01 0.000792 0.0792 0.402 Other_T L1
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.98e-01 0.0284 0.073 0.402 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -25662 sc-eQTL 6.98e-01 -0.0385 0.0992 0.403 B_Activated L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.06e-01 0.171 0.105 0.403 B_Activated L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 2.72e-01 -0.109 0.0994 0.403 B_Activated L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.42e-01 -0.0174 0.0872 0.401 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 4.76e-01 0.0664 0.0929 0.401 B_Intermediate L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 2.20e-01 0.0935 0.076 0.401 B_Intermediate L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 3.31e-01 -0.0902 0.0925 0.403 B_Memory L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.25e-01 0.00839 0.0894 0.403 B_Memory L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 3.89e-02 -0.167 0.0802 0.403 B_Memory L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.08e-01 0.134 0.0827 0.402 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 6.88e-01 0.032 0.0797 0.402 B_Naive1 L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 2.07e-01 0.0951 0.0751 0.402 B_Naive1 L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 7.35e-01 -0.0319 0.0941 0.401 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 8.67e-01 -0.0151 0.0902 0.401 B_Naive2 L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 8.06e-01 -0.0217 0.0882 0.401 B_Naive2 L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 9.73e-01 0.00322 0.0947 0.389 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.26e-01 -0.00868 0.0939 0.389 CD4_CTL L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 4.30e-01 -0.0731 0.0925 0.389 CD4_CTL L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 4.92e-02 0.131 0.0663 0.402 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.46e-01 -0.00427 0.0631 0.402 CD4_Naive L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 9.52e-01 0.00337 0.056 0.402 CD4_Naive L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 5.22e-01 0.0457 0.0712 0.402 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.84e-01 0.00148 0.075 0.402 CD4_TCM L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 4.92e-01 -0.0437 0.0635 0.402 CD4_TCM L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 4.35e-01 -0.0647 0.0826 0.402 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.23e-01 0.00792 0.0819 0.402 CD4_TEM L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 8.87e-01 -0.0119 0.0833 0.402 CD4_TEM L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 3.07e-01 0.0771 0.0753 0.402 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 6.50e-01 0.0351 0.0773 0.402 CD8_CTL L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.84e-01 0.031 0.0762 0.402 CD8_CTL L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 9.97e-02 0.122 0.0739 0.402 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 3.92e-01 0.0683 0.0796 0.402 CD8_Naive L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.65e-01 0.0308 0.071 0.402 CD8_Naive L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.69e-01 -0.0142 0.0863 0.396 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 7.99e-01 0.0236 0.0922 0.396 CD8_TCM L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 2.72e-01 0.1 0.0912 0.396 CD8_TCM L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.94e-01 0.0118 0.0883 0.402 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 4.79e-01 0.0671 0.0947 0.402 CD8_TEM L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 8.03e-01 -0.0242 0.0967 0.402 CD8_TEM L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 9.88e-01 -0.00131 0.0904 0.403 MAIT L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 5.06e-01 0.0558 0.0837 0.403 MAIT L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 9.52e-01 0.00475 0.0786 0.403 MAIT L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 6.24e-01 -0.0449 0.0916 0.398 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 6.07e-01 -0.0452 0.0878 0.398 NK_CD56bright L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 1.23e-01 -0.136 0.0878 0.398 NK_CD56bright L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 3.34e-01 -0.0787 0.0812 0.397 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 8.99e-01 0.00882 0.0695 0.397 NK_CD56dim L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 8.49e-02 0.126 0.0729 0.397 NK_CD56dim L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.50e-01 -0.0176 0.0929 0.404 NK_HLA L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 2.32e-01 0.112 0.0933 0.404 NK_HLA L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 8.38e-01 -0.0197 0.0958 0.404 NK_HLA L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.66e-01 -0.113 0.0815 0.397 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.09e-01 0.122 0.0757 0.397 NK_cytokine L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.81e-01 -0.0396 0.0717 0.397 NK_cytokine L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.00e+00 6.77e-05 0.119 0.422 PB L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.06e-01 -0.185 0.114 0.422 PB L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.33e-02 0.235 0.12 0.422 PB L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 2.81e-01 -0.101 0.0936 0.398 Pro_T L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.72e-01 0.00328 0.0936 0.398 Pro_T L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.30e-01 0.0575 0.0913 0.398 Pro_T L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 7.20e-01 -0.031 0.0864 0.402 Treg L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 7.91e-01 0.0234 0.0884 0.402 Treg L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 3.40e-01 0.0799 0.0835 0.402 Treg L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.61e-01 0.127 0.0901 0.4 cDC L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.74e-01 -0.00305 0.0952 0.4 cDC L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 1.76e-01 -0.123 0.0903 0.4 cDC L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 2.99e-01 -0.0931 0.0894 0.4 cDC L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 9.40e-01 0.00578 0.0764 0.402 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.04e-01 0.00739 0.0614 0.402 cMono_IL1B L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.17e-01 0.0483 0.0744 0.402 cMono_IL1B L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 7.03e-01 0.0247 0.0648 0.402 cMono_IL1B L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.70e-01 -0.014 0.0856 0.402 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 2.07e-01 -0.101 0.0801 0.402 cMono_S100A L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.83e-01 -0.0333 0.0813 0.402 cMono_S100A L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 4.21e-01 -0.0648 0.0804 0.402 cMono_S100A L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 2.79e-01 0.118 0.108 0.4 gdT L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 4.03e-01 -0.0914 0.109 0.4 gdT L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 9.70e-01 0.00412 0.11 0.4 gdT L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.11e-01 0.0221 0.0922 0.398 intMono L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 4.62e-02 -0.186 0.0929 0.398 intMono L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.54e-01 0.0554 0.0935 0.398 intMono L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 5.23e-01 0.0552 0.0863 0.398 intMono L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 9.66e-01 -0.00376 0.0875 0.396 ncMono L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.47e-01 -0.126 0.0864 0.396 ncMono L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 7.85e-01 -0.0245 0.0898 0.396 ncMono L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 7.77e-01 0.0217 0.0765 0.396 ncMono L2
ENSG00000075089 ACTR6 -25662 sc-eQTL 4.44e-01 0.0734 0.0957 0.401 pDC L2
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.38e-01 0.137 0.0919 0.401 pDC L2
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.71e-01 0.0428 0.101 0.401 pDC L2
ENSG00000139354 GAS2L3 -400223 sc-eQTL 2.25e-01 0.0988 0.0811 0.401 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -25662 sc-eQTL 4.29e-01 -0.0686 0.0865 0.402 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 3.79e-01 0.076 0.0863 0.402 B_Memory LOneK1K
ENSG00000136021 SCYL2 -93680 sc-eQTL 4.69e-01 -0.0491 0.0676 0.402 B_Memory LOneK1K
ENSG00000075089 ACTR6 -25662 sc-eQTL 1.27e-01 0.126 0.0821 0.402 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 9.13e-01 0.0082 0.0749 0.402 B_Naive LOneK1K
ENSG00000136021 SCYL2 -93680 sc-eQTL 6.68e-01 0.0318 0.0739 0.402 B_Naive LOneK1K
ENSG00000075089 ACTR6 -25662 sc-eQTL 8.90e-01 -0.0104 0.075 0.402 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 7.10e-01 -0.0221 0.0594 0.402 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 -93680 sc-eQTL 7.15e-01 0.0244 0.0668 0.402 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 -400223 sc-eQTL 4.60e-01 -0.0475 0.0641 0.402 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 -25662 sc-eQTL 7.86e-01 -0.024 0.0883 0.399 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 2.99e-02 -0.179 0.0818 0.399 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.51e-01 0.0489 0.0818 0.399 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 -400223 sc-eQTL 4.80e-01 0.0557 0.0789 0.399 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 -25662 sc-eQTL 3.63e-01 -0.0652 0.0715 0.397 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 30586 sc-eQTL 1.69e-01 0.0827 0.0599 0.397 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 -93680 sc-eQTL 5.01e-01 0.0411 0.0608 0.397 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075089 ACTR6 -25662 eQTL 0.0334 0.0352 0.0165 0.0 0.0 0.403
ENSG00000238105 GOLGA2P5 -199 eQTL 0.0221 -0.0303 0.0132 0.0 0.0 0.403
ENSG00000280088 AC126474.2 139386 eQTL 0.00497 -0.0401 0.0142 0.00338 0.00139 0.403

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000280088 AC126474.2 139386 6.2e-06 9.39e-06 1.21e-06 4.96e-06 2.35e-06 3.52e-06 9.71e-06 2.21e-06 9.1e-06 5.31e-06 1.08e-05 4.99e-06 1.16e-05 3.47e-06 2.17e-06 6.42e-06 3.8e-06 5e-06 2.65e-06 2.8e-06 5.12e-06 8.66e-06 6.24e-06 3.24e-06 1.18e-05 3.73e-06 4.87e-06 3.88e-06 7.34e-06 7.02e-06 4.73e-06 9.86e-07 1.29e-06 2.99e-06 4.23e-06 2.51e-06 1.76e-06 1.93e-06 2.16e-06 9.97e-07 1.14e-06 9.56e-06 1.28e-06 2.86e-07 7.93e-07 1.72e-06 1.5e-06 7.73e-07 4.73e-07