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Genes within 1Mb (chr12:100126343:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.75e-01 0.0819 0.0749 0.547 B L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 4.05e-01 -0.053 0.0636 0.547 B L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 5.42e-01 0.0388 0.0634 0.547 B L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.34e-01 -0.00474 0.0573 0.547 CD4T L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 6.20e-01 0.0265 0.0533 0.547 CD4T L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 5.09e-01 0.0301 0.0455 0.547 CD4T L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 3.09e-01 -0.0646 0.0633 0.547 CD8T L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 5.50e-02 -0.12 0.0622 0.547 CD8T L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.91e-01 -0.00809 0.0588 0.547 CD8T L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 3.96e-01 -0.0721 0.0847 0.545 DC L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.39e-01 -0.0963 0.0816 0.545 DC L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.07e-01 0.0221 0.0907 0.545 DC L1
ENSG00000139354 GAS2L3 -447340 sc-eQTL 5.05e-01 0.0563 0.0843 0.545 DC L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 8.39e-01 -0.0152 0.0747 0.547 Mono L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.06e-01 0.0151 0.0615 0.547 Mono L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.26e-01 -0.0225 0.0641 0.547 Mono L1
ENSG00000139354 GAS2L3 -447340 sc-eQTL 9.94e-01 -0.000429 0.06 0.547 Mono L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 4.44e-01 0.0524 0.0683 0.549 NK L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 1.18e-01 -0.0882 0.0561 0.549 NK L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 3.36e-01 -0.0559 0.058 0.549 NK L1
ENSG00000075089 ACTR6 -72779 sc-eQTL 1.78e-01 0.11 0.0813 0.547 Other_T L1
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 7.94e-01 -0.0203 0.0775 0.547 Other_T L1
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.40e-01 -0.0145 0.0714 0.547 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.81e-01 0.107 0.0987 0.536 B_Activated L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 3.69e-02 -0.22 0.105 0.536 B_Activated L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 4.28e-01 0.0789 0.0993 0.536 B_Activated L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 5.90e-01 0.0463 0.0858 0.547 B_Intermediate L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.25e-01 -0.111 0.0913 0.547 B_Intermediate L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.57e-01 -0.085 0.0748 0.547 B_Intermediate L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.56e-02 0.152 0.0905 0.545 B_Memory L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 9.35e-01 0.00716 0.0878 0.545 B_Memory L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 1.17e-01 0.125 0.0792 0.545 B_Memory L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.85e-01 -0.0222 0.0814 0.547 B_Naive1 L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 4.56e-01 -0.0582 0.0778 0.547 B_Naive1 L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.99e-01 -0.0765 0.0735 0.547 B_Naive1 L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 3.16e-01 0.0927 0.0922 0.547 B_Naive2 L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 7.04e-01 0.0336 0.0885 0.547 B_Naive2 L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.23e-01 0.0308 0.0865 0.547 B_Naive2 L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.94e-01 -0.000752 0.0928 0.557 CD4_CTL L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 7.30e-01 0.0318 0.092 0.557 CD4_CTL L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 4.36e-01 0.0707 0.0906 0.557 CD4_CTL L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 5.32e-01 -0.041 0.0654 0.547 CD4_Naive L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 6.97e-01 0.0241 0.0618 0.547 CD4_Naive L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.73e-01 -0.0158 0.0548 0.547 CD4_Naive L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.09e-01 0.00806 0.0701 0.547 CD4_TCM L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.57e-01 -0.0133 0.0738 0.547 CD4_TCM L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.38e-01 0.0738 0.0624 0.547 CD4_TCM L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 1.92e-01 0.107 0.0815 0.547 CD4_TEM L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.43e-01 0.016 0.0811 0.547 CD4_TEM L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 3.58e-01 0.0757 0.0822 0.547 CD4_TEM L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.90e-01 -0.000917 0.0746 0.547 CD8_CTL L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 3.07e-01 -0.0779 0.0762 0.547 CD8_CTL L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 6.78e-01 0.0312 0.0752 0.547 CD8_CTL L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 3.20e-01 -0.0726 0.0729 0.547 CD8_Naive L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 3.21e-01 -0.0778 0.0782 0.547 CD8_Naive L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.43e-01 0.0139 0.0698 0.547 CD8_Naive L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.03e-01 -0.11 0.086 0.551 CD8_TCM L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.92e-01 -0.0973 0.092 0.551 CD8_TCM L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 3.03e-01 -0.0942 0.0912 0.551 CD8_TCM L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.29e-01 0.0303 0.0872 0.55 CD8_TEM L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.56e-01 -0.106 0.0933 0.55 CD8_TEM L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 4.77e-01 0.068 0.0954 0.55 CD8_TEM L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.79e-01 0.0959 0.0884 0.545 MAIT L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 4.08e-01 -0.068 0.082 0.545 MAIT L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 5.48e-01 0.0464 0.077 0.545 MAIT L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 6.45e-01 0.0419 0.0907 0.551 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 5.32e-01 0.0543 0.0868 0.551 NK_CD56bright L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 1.86e-01 0.116 0.087 0.551 NK_CD56bright L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 1.48e-01 0.116 0.0801 0.552 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.05e-01 -0.017 0.0687 0.552 NK_CD56dim L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.65e-02 -0.16 0.0717 0.552 NK_CD56dim L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.23e-01 0.0328 0.0923 0.543 NK_HLA L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 5.08e-01 -0.0617 0.093 0.543 NK_HLA L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.53e-01 -0.03 0.0952 0.543 NK_HLA L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.68e-01 0.09 0.0811 0.552 NK_cytokine L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.92e-02 -0.164 0.0748 0.552 NK_cytokine L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.26e-01 0.0157 0.0712 0.552 NK_cytokine L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 6.60e-01 0.0519 0.118 0.526 PB L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 1.14e-01 0.178 0.112 0.526 PB L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 1.71e-01 -0.165 0.119 0.526 PB L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.53e-01 0.105 0.0912 0.55 Pro_T L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 9.45e-01 0.00627 0.0912 0.55 Pro_T L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 6.50e-01 -0.0405 0.0891 0.55 Pro_T L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 4.89e-01 0.0586 0.0846 0.547 Treg L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 9.76e-01 -0.00256 0.0867 0.547 Treg L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 4.79e-01 -0.0581 0.082 0.547 Treg L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.09e-01 -0.113 0.0898 0.544 cDC L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.20e-01 -0.0216 0.0948 0.544 cDC L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.98e-01 0.0941 0.0902 0.544 cDC L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 3.97e-01 0.0757 0.0891 0.544 cDC L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 8.13e-01 0.0178 0.0751 0.547 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 3.18e-01 -0.0602 0.0602 0.547 cMono_IL1B L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.92e-01 -0.0193 0.0732 0.547 cMono_IL1B L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 6.93e-01 -0.0252 0.0637 0.547 cMono_IL1B L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.44e-01 0.00594 0.0847 0.547 cMono_S100A L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 4.30e-01 0.0628 0.0795 0.547 cMono_S100A L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.58e-01 0.0248 0.0805 0.547 cMono_S100A L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 9.19e-01 0.0081 0.0797 0.547 cMono_S100A L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.68e-01 -0.0317 0.107 0.548 gdT L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.00e-01 0.0274 0.108 0.548 gdT L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.98e-01 -0.014 0.109 0.548 gdT L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 8.05e-01 -0.0227 0.0917 0.556 intMono L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 7.87e-02 0.164 0.0926 0.556 intMono L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 6.18e-01 -0.0464 0.093 0.556 intMono L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 4.10e-01 -0.0708 0.0857 0.556 intMono L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.55e-01 -0.0276 0.0883 0.554 ncMono L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 6.05e-01 0.0454 0.0875 0.554 ncMono L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 4.53e-01 0.0681 0.0905 0.554 ncMono L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 7.57e-01 0.0239 0.0772 0.554 ncMono L2
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.76e-01 -0.0029 0.0963 0.554 pDC L2
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 1.72e-01 -0.127 0.0924 0.554 pDC L2
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.90e-01 -0.027 0.101 0.554 pDC L2
ENSG00000139354 GAS2L3 -447340 sc-eQTL 2.40e-01 -0.0961 0.0815 0.554 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -72779 sc-eQTL 1.06e-01 0.138 0.0848 0.547 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 2.05e-01 -0.108 0.0848 0.547 B_Memory LOneK1K
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.08e-01 0.025 0.0666 0.547 B_Memory LOneK1K
ENSG00000075089 ACTR6 -72779 sc-eQTL 8.23e-01 -0.0181 0.0807 0.547 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.25e-01 -0.0162 0.0732 0.547 B_Naive LOneK1K
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.07e-01 -0.0177 0.0722 0.547 B_Naive LOneK1K
ENSG00000075089 ACTR6 -72779 sc-eQTL 7.98e-01 0.019 0.0739 0.547 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 5.65e-01 -0.0337 0.0585 0.547 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 -140797 sc-eQTL 8.89e-01 -0.0092 0.0658 0.547 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 -447340 sc-eQTL 8.08e-01 0.0154 0.0632 0.547 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 -72779 sc-eQTL 9.78e-01 -0.00238 0.0875 0.55 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 1.87e-01 0.108 0.0816 0.55 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 -140797 sc-eQTL 7.38e-01 -0.0271 0.0811 0.55 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 -447340 sc-eQTL 6.77e-01 -0.0326 0.0782 0.55 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 -72779 sc-eQTL 2.64e-01 0.0788 0.0703 0.552 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L -16531 sc-eQTL 8.46e-02 -0.102 0.0588 0.552 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 -140797 sc-eQTL 2.87e-01 -0.0638 0.0598 0.552 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075089 ACTR6 -72779 eQTL 0.0199 0.0382 0.0164 0.0 0.0 0.462
ENSG00000111647 UHRF1BP1L -16531 eQTL 2.79e-03 -0.026 0.00866 0.00204 0.0 0.462
ENSG00000280088 AC126474.2 92269 eQTL 0.0188 0.0333 0.0141 0.00179 0.0 0.462

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000238105 \N -47316 7.96e-06 9.74e-06 1.35e-06 5.14e-06 2.42e-06 4.15e-06 1.03e-05 1.91e-06 8.81e-06 5.11e-06 1.21e-05 5.26e-06 1.36e-05 3.95e-06 2.52e-06 6.54e-06 4.01e-06 6.88e-06 2.62e-06 2.65e-06 4.66e-06 8.59e-06 7.47e-06 3.35e-06 1.45e-05 3.74e-06 4.87e-06 3.43e-06 9.57e-06 8.53e-06 5.38e-06 9.9e-07 1.31e-06 3.24e-06 4.34e-06 2.59e-06 1.74e-06 1.89e-06 2.01e-06 9.35e-07 9.75e-07 1.19e-05 1.32e-06 2.52e-07 7.7e-07 1.62e-06 1.3e-06 6.55e-07 4.28e-07
ENSG00000280088 AC126474.2 92269 4.6e-06 5.1e-06 8.34e-07 3.15e-06 1.59e-06 1.6e-06 5.64e-06 1.03e-06 5.13e-06 2.5e-06 6.14e-06 3.31e-06 7.64e-06 1.97e-06 1.23e-06 3.81e-06 1.96e-06 3.83e-06 1.54e-06 1.14e-06 3.02e-06 4.78e-06 4.49e-06 1.53e-06 8.24e-06 1.96e-06 2.45e-06 1.85e-06 4.46e-06 4.71e-06 2.89e-06 4.88e-07 5.46e-07 1.59e-06 1.98e-06 1.18e-06 9.56e-07 4.56e-07 8.11e-07 5.04e-07 6.35e-07 5.79e-06 3.65e-07 1.58e-07 6.09e-07 1.03e-06 9.74e-07 6.45e-07 3.6e-07