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Genes within 1Mb (chr1:78748894:GA:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000077254 USP33 989042 sc-eQTL 2.22e-01 0.109 0.0892 0.87 B L1
ENSG00000137959 IFI44L 128972 sc-eQTL 3.29e-01 0.102 0.104 0.87 B L1
ENSG00000137965 IFI44 99098 sc-eQTL 5.03e-01 0.0636 0.0949 0.87 B L1
ENSG00000162613 FUBP1 769784 sc-eQTL 1.65e-01 -0.124 0.0887 0.87 B L1
ENSG00000162614 NEXN 860381 sc-eQTL 8.81e-01 0.0178 0.119 0.87 B L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 8.90e-02 0.211 0.123 0.87 B L1
ENSG00000180488 MIGA1 969270 sc-eQTL 9.21e-01 0.0106 0.107 0.87 B L1
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.72e-01 0.0395 0.0932 0.87 B L1
ENSG00000077254 USP33 989042 sc-eQTL 3.52e-01 0.067 0.0719 0.87 CD4T L1
ENSG00000137959 IFI44L 128972 sc-eQTL 8.91e-02 0.166 0.097 0.87 CD4T L1
ENSG00000137965 IFI44 99098 sc-eQTL 1.19e-02 0.233 0.0919 0.87 CD4T L1
ENSG00000162613 FUBP1 769784 sc-eQTL 1.43e-01 -0.0996 0.0677 0.87 CD4T L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.84e-03 0.225 0.0807 0.87 CD4T L1
ENSG00000180488 MIGA1 969270 sc-eQTL 9.35e-01 -0.00692 0.0849 0.87 CD4T L1
ENSG00000077254 USP33 989042 sc-eQTL 4.87e-02 0.195 0.0982 0.87 CD8T L1
ENSG00000137959 IFI44L 128972 sc-eQTL 2.39e-01 0.116 0.0979 0.87 CD8T L1
ENSG00000137965 IFI44 99098 sc-eQTL 7.23e-02 0.172 0.0955 0.87 CD8T L1
ENSG00000162613 FUBP1 769784 sc-eQTL 5.62e-02 -0.152 0.0792 0.87 CD8T L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 6.53e-01 0.0492 0.109 0.87 CD8T L1
ENSG00000180488 MIGA1 969270 sc-eQTL 8.24e-01 0.0244 0.11 0.87 CD8T L1
ENSG00000273338 AC103591.3 744340 sc-eQTL 2.33e-01 0.128 0.107 0.87 CD8T L1
ENSG00000077254 USP33 989042 sc-eQTL 5.18e-01 0.0712 0.11 0.872 DC L1
ENSG00000137959 IFI44L 128972 sc-eQTL 2.91e-02 0.202 0.0918 0.872 DC L1
ENSG00000137965 IFI44 99098 sc-eQTL 7.66e-01 0.0272 0.0911 0.872 DC L1
ENSG00000162613 FUBP1 769784 sc-eQTL 4.16e-01 -0.0985 0.121 0.872 DC L1
ENSG00000162614 NEXN 860381 sc-eQTL 2.53e-01 0.133 0.116 0.872 DC L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 9.87e-01 -0.00209 0.126 0.872 DC L1
ENSG00000180488 MIGA1 969270 sc-eQTL 5.13e-01 0.089 0.136 0.872 DC L1
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.05e-01 0.0672 0.13 0.872 DC L1
ENSG00000077254 USP33 989042 sc-eQTL 9.22e-01 -0.00722 0.0741 0.87 Mono L1
ENSG00000137959 IFI44L 128972 sc-eQTL 7.01e-01 0.028 0.0728 0.87 Mono L1
ENSG00000137965 IFI44 99098 sc-eQTL 5.89e-01 0.0406 0.075 0.87 Mono L1
ENSG00000162613 FUBP1 769784 sc-eQTL 9.19e-01 -0.0105 0.102 0.87 Mono L1
ENSG00000162614 NEXN 860381 sc-eQTL 3.19e-01 0.0828 0.0829 0.87 Mono L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 7.31e-01 0.0388 0.113 0.87 Mono L1
ENSG00000180488 MIGA1 969270 sc-eQTL 8.28e-01 -0.0249 0.114 0.87 Mono L1
ENSG00000273338 AC103591.3 744340 sc-eQTL 7.95e-01 0.0306 0.117 0.87 Mono L1
ENSG00000077254 USP33 989042 sc-eQTL 2.29e-01 0.126 0.104 0.869 NK L1
ENSG00000137959 IFI44L 128972 sc-eQTL 1.37e-01 0.127 0.0852 0.869 NK L1
ENSG00000137965 IFI44 99098 sc-eQTL 6.66e-01 0.0388 0.0899 0.869 NK L1
ENSG00000162613 FUBP1 769784 sc-eQTL 7.29e-01 -0.0301 0.0868 0.869 NK L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 7.06e-01 0.045 0.119 0.869 NK L1
ENSG00000180488 MIGA1 969270 sc-eQTL 8.54e-01 -0.0211 0.115 0.869 NK L1
ENSG00000077254 USP33 989042 sc-eQTL 5.03e-01 0.0688 0.103 0.87 Other_T L1
ENSG00000137959 IFI44L 128972 sc-eQTL 9.12e-01 0.0122 0.111 0.87 Other_T L1
ENSG00000137965 IFI44 99098 sc-eQTL 2.21e-02 0.257 0.111 0.87 Other_T L1
ENSG00000162613 FUBP1 769784 sc-eQTL 1.94e-01 0.117 0.0896 0.87 Other_T L1
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.30e-01 0.0862 0.137 0.87 Other_T L1
ENSG00000180488 MIGA1 969270 sc-eQTL 2.08e-02 0.306 0.131 0.87 Other_T L1
ENSG00000273338 AC103591.3 744340 sc-eQTL 3.92e-01 0.104 0.122 0.87 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000077254 USP33 989042 sc-eQTL 7.12e-01 -0.0556 0.15 0.872 B_Activated L2
ENSG00000137959 IFI44L 128972 sc-eQTL 3.70e-01 0.112 0.124 0.872 B_Activated L2
ENSG00000137965 IFI44 99098 sc-eQTL 3.68e-02 0.261 0.124 0.872 B_Activated L2
ENSG00000162613 FUBP1 769784 sc-eQTL 1.81e-01 -0.194 0.145 0.872 B_Activated L2
ENSG00000162614 NEXN 860381 sc-eQTL 2.19e-01 0.145 0.118 0.872 B_Activated L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.06e-01 0.228 0.14 0.872 B_Activated L2
ENSG00000180488 MIGA1 969270 sc-eQTL 3.81e-01 0.133 0.152 0.872 B_Activated L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.11e-01 -0.069 0.135 0.872 B_Activated L2
ENSG00000077254 USP33 989042 sc-eQTL 1.73e-01 -0.162 0.118 0.869 B_Intermediate L2
ENSG00000137959 IFI44L 128972 sc-eQTL 7.66e-01 0.0337 0.113 0.869 B_Intermediate L2
ENSG00000137965 IFI44 99098 sc-eQTL 4.50e-01 0.0864 0.114 0.869 B_Intermediate L2
ENSG00000162613 FUBP1 769784 sc-eQTL 8.98e-01 0.0145 0.113 0.869 B_Intermediate L2
ENSG00000162614 NEXN 860381 sc-eQTL 3.17e-01 0.126 0.126 0.869 B_Intermediate L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.86e-01 0.176 0.133 0.869 B_Intermediate L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.39e-01 0.097 0.125 0.869 B_Intermediate L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 4.20e-01 0.087 0.108 0.869 B_Intermediate L2
ENSG00000077254 USP33 989042 sc-eQTL 5.30e-01 -0.0788 0.125 0.869 B_Memory L2
ENSG00000137959 IFI44L 128972 sc-eQTL 3.79e-01 -0.087 0.0987 0.869 B_Memory L2
ENSG00000137965 IFI44 99098 sc-eQTL 2.41e-01 0.116 0.0986 0.869 B_Memory L2
ENSG00000162613 FUBP1 769784 sc-eQTL 6.88e-01 -0.0518 0.129 0.869 B_Memory L2
ENSG00000162614 NEXN 860381 sc-eQTL 1.31e-01 0.189 0.125 0.869 B_Memory L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 4.28e-01 -0.103 0.13 0.869 B_Memory L2
ENSG00000180488 MIGA1 969270 sc-eQTL 9.35e-01 0.0106 0.13 0.869 B_Memory L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.70e-01 0.0471 0.111 0.869 B_Memory L2
ENSG00000077254 USP33 989042 sc-eQTL 1.28e-02 0.266 0.106 0.87 B_Naive1 L2
ENSG00000137959 IFI44L 128972 sc-eQTL 3.84e-01 0.0845 0.0969 0.87 B_Naive1 L2
ENSG00000137965 IFI44 99098 sc-eQTL 7.11e-01 -0.0374 0.101 0.87 B_Naive1 L2
ENSG00000162613 FUBP1 769784 sc-eQTL 7.01e-01 -0.0382 0.0996 0.87 B_Naive1 L2
ENSG00000162614 NEXN 860381 sc-eQTL 6.45e-01 -0.0552 0.12 0.87 B_Naive1 L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.72e-01 0.178 0.13 0.87 B_Naive1 L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.33e-01 -0.0988 0.126 0.87 B_Naive1 L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 7.79e-01 0.0276 0.0981 0.87 B_Naive1 L2
ENSG00000077254 USP33 989042 sc-eQTL 8.79e-01 -0.0183 0.12 0.869 B_Naive2 L2
ENSG00000137959 IFI44L 128972 sc-eQTL 5.95e-02 0.186 0.098 0.869 B_Naive2 L2
ENSG00000137965 IFI44 99098 sc-eQTL 6.56e-01 0.0482 0.108 0.869 B_Naive2 L2
ENSG00000162613 FUBP1 769784 sc-eQTL 3.57e-01 -0.105 0.114 0.869 B_Naive2 L2
ENSG00000162614 NEXN 860381 sc-eQTL 9.71e-01 0.0043 0.116 0.869 B_Naive2 L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 8.59e-01 0.0241 0.135 0.869 B_Naive2 L2
ENSG00000180488 MIGA1 969270 sc-eQTL 9.70e-01 0.00498 0.134 0.869 B_Naive2 L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 3.35e-01 0.11 0.114 0.869 B_Naive2 L2
ENSG00000077254 USP33 989042 sc-eQTL 4.71e-01 0.1 0.138 0.873 CD4_CTL L2
ENSG00000137959 IFI44L 128972 sc-eQTL 5.87e-01 -0.0589 0.108 0.873 CD4_CTL L2
ENSG00000137965 IFI44 99098 sc-eQTL 1.00e-01 -0.205 0.124 0.873 CD4_CTL L2
ENSG00000162613 FUBP1 769784 sc-eQTL 7.34e-01 -0.0469 0.138 0.873 CD4_CTL L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 3.40e-01 0.129 0.135 0.873 CD4_CTL L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.66e-01 0.103 0.141 0.873 CD4_CTL L2
ENSG00000077254 USP33 989042 sc-eQTL 4.71e-01 0.0635 0.088 0.87 CD4_Naive L2
ENSG00000137959 IFI44L 128972 sc-eQTL 4.30e-02 0.209 0.103 0.87 CD4_Naive L2
ENSG00000137965 IFI44 99098 sc-eQTL 2.85e-03 0.311 0.103 0.87 CD4_Naive L2
ENSG00000162613 FUBP1 769784 sc-eQTL 7.63e-02 -0.133 0.0747 0.87 CD4_Naive L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 6.77e-02 0.146 0.0797 0.87 CD4_Naive L2
ENSG00000180488 MIGA1 969270 sc-eQTL 1.22e-01 0.142 0.0917 0.87 CD4_Naive L2
ENSG00000077254 USP33 989042 sc-eQTL 8.86e-01 -0.0134 0.0939 0.87 CD4_TCM L2
ENSG00000137959 IFI44L 128972 sc-eQTL 4.38e-01 0.0743 0.0957 0.87 CD4_TCM L2
ENSG00000137965 IFI44 99098 sc-eQTL 8.13e-02 0.174 0.0995 0.87 CD4_TCM L2
ENSG00000162613 FUBP1 769784 sc-eQTL 2.15e-01 -0.116 0.0934 0.87 CD4_TCM L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 2.79e-01 0.127 0.117 0.87 CD4_TCM L2
ENSG00000180488 MIGA1 969270 sc-eQTL 1.06e-02 -0.313 0.121 0.87 CD4_TCM L2
ENSG00000077254 USP33 989042 sc-eQTL 7.36e-01 -0.0419 0.124 0.87 CD4_TEM L2
ENSG00000137959 IFI44L 128972 sc-eQTL 8.42e-01 0.0229 0.115 0.87 CD4_TEM L2
ENSG00000137965 IFI44 99098 sc-eQTL 5.02e-01 0.0778 0.116 0.87 CD4_TEM L2
ENSG00000162613 FUBP1 769784 sc-eQTL 2.44e-01 -0.13 0.111 0.87 CD4_TEM L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 6.92e-01 0.0518 0.131 0.87 CD4_TEM L2
ENSG00000180488 MIGA1 969270 sc-eQTL 9.61e-01 -0.00656 0.134 0.87 CD4_TEM L2
ENSG00000077254 USP33 989042 sc-eQTL 6.98e-01 0.0444 0.114 0.87 CD8_CTL L2
ENSG00000137959 IFI44L 128972 sc-eQTL 4.17e-01 0.08 0.0984 0.87 CD8_CTL L2
ENSG00000137965 IFI44 99098 sc-eQTL 4.19e-01 0.0894 0.11 0.87 CD8_CTL L2
ENSG00000162613 FUBP1 769784 sc-eQTL 1.01e-01 -0.171 0.104 0.87 CD8_CTL L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 4.05e-01 -0.103 0.123 0.87 CD8_CTL L2
ENSG00000180488 MIGA1 969270 sc-eQTL 6.25e-01 -0.0558 0.114 0.87 CD8_CTL L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 2.99e-02 0.254 0.116 0.87 CD8_CTL L2
ENSG00000077254 USP33 989042 sc-eQTL 1.02e-01 0.189 0.115 0.87 CD8_Naive L2
ENSG00000137959 IFI44L 128972 sc-eQTL 6.38e-02 0.193 0.104 0.87 CD8_Naive L2
ENSG00000137965 IFI44 99098 sc-eQTL 5.28e-01 0.0678 0.107 0.87 CD8_Naive L2
ENSG00000162613 FUBP1 769784 sc-eQTL 7.84e-01 -0.027 0.0984 0.87 CD8_Naive L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 4.94e-01 0.081 0.118 0.87 CD8_Naive L2
ENSG00000180488 MIGA1 969270 sc-eQTL 8.50e-01 0.0227 0.12 0.87 CD8_Naive L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 9.23e-01 0.0113 0.116 0.87 CD8_Naive L2
ENSG00000077254 USP33 989042 sc-eQTL 9.37e-01 0.0104 0.132 0.866 CD8_TCM L2
ENSG00000137959 IFI44L 128972 sc-eQTL 3.54e-02 0.266 0.125 0.866 CD8_TCM L2
ENSG00000137965 IFI44 99098 sc-eQTL 1.37e-01 0.171 0.114 0.866 CD8_TCM L2
ENSG00000162613 FUBP1 769784 sc-eQTL 1.16e-01 -0.189 0.12 0.866 CD8_TCM L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.66e-01 -0.182 0.131 0.866 CD8_TCM L2
ENSG00000180488 MIGA1 969270 sc-eQTL 7.53e-01 -0.0425 0.135 0.866 CD8_TCM L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.66e-02 0.216 0.117 0.866 CD8_TCM L2
ENSG00000077254 USP33 989042 sc-eQTL 1.26e-01 0.232 0.151 0.87 CD8_TEM L2
ENSG00000137959 IFI44L 128972 sc-eQTL 2.16e-01 -0.138 0.111 0.87 CD8_TEM L2
ENSG00000137965 IFI44 99098 sc-eQTL 4.37e-01 -0.0901 0.116 0.87 CD8_TEM L2
ENSG00000162613 FUBP1 769784 sc-eQTL 8.57e-01 -0.0252 0.14 0.87 CD8_TEM L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.61e-02 0.268 0.139 0.87 CD8_TEM L2
ENSG00000180488 MIGA1 969270 sc-eQTL 5.25e-01 -0.0949 0.149 0.87 CD8_TEM L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 8.54e-01 0.0224 0.122 0.87 CD8_TEM L2
ENSG00000077254 USP33 989042 sc-eQTL 5.39e-01 -0.0719 0.117 0.872 MAIT L2
ENSG00000137959 IFI44L 128972 sc-eQTL 4.22e-01 -0.0864 0.107 0.872 MAIT L2
ENSG00000137965 IFI44 99098 sc-eQTL 6.37e-01 0.0565 0.119 0.872 MAIT L2
ENSG00000162613 FUBP1 769784 sc-eQTL 4.49e-01 0.0962 0.127 0.872 MAIT L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 8.94e-01 -0.0173 0.13 0.872 MAIT L2
ENSG00000180488 MIGA1 969270 sc-eQTL 3.29e-02 0.275 0.128 0.872 MAIT L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 7.19e-01 0.0427 0.119 0.872 MAIT L2
ENSG00000077254 USP33 989042 sc-eQTL 9.21e-01 0.0138 0.139 0.864 NK_CD56bright L2
ENSG00000137959 IFI44L 128972 sc-eQTL 2.18e-02 0.234 0.101 0.864 NK_CD56bright L2
ENSG00000137965 IFI44 99098 sc-eQTL 4.98e-01 -0.0818 0.12 0.864 NK_CD56bright L2
ENSG00000162613 FUBP1 769784 sc-eQTL 2.18e-01 0.157 0.127 0.864 NK_CD56bright L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.86e-01 -0.0727 0.133 0.864 NK_CD56bright L2
ENSG00000180488 MIGA1 969270 sc-eQTL 6.13e-01 0.0653 0.129 0.864 NK_CD56bright L2
ENSG00000077254 USP33 989042 sc-eQTL 6.06e-01 0.0577 0.112 0.869 NK_CD56dim L2
ENSG00000137959 IFI44L 128972 sc-eQTL 6.91e-01 0.0346 0.0871 0.869 NK_CD56dim L2
ENSG00000137965 IFI44 99098 sc-eQTL 8.41e-01 0.0187 0.0931 0.869 NK_CD56dim L2
ENSG00000162613 FUBP1 769784 sc-eQTL 7.55e-01 0.0318 0.102 0.869 NK_CD56dim L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 2.73e-01 -0.143 0.13 0.869 NK_CD56dim L2
ENSG00000180488 MIGA1 969270 sc-eQTL 8.84e-01 -0.0179 0.123 0.869 NK_CD56dim L2
ENSG00000077254 USP33 989042 sc-eQTL 9.97e-01 0.000483 0.141 0.87 NK_HLA L2
ENSG00000137959 IFI44L 128972 sc-eQTL 9.58e-02 0.183 0.109 0.87 NK_HLA L2
ENSG00000137965 IFI44 99098 sc-eQTL 2.89e-02 0.27 0.122 0.87 NK_HLA L2
ENSG00000162613 FUBP1 769784 sc-eQTL 4.87e-01 -0.0936 0.134 0.87 NK_HLA L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 8.39e-01 0.0267 0.131 0.87 NK_HLA L2
ENSG00000180488 MIGA1 969270 sc-eQTL 6.65e-01 -0.0593 0.137 0.87 NK_HLA L2
ENSG00000077254 USP33 989042 sc-eQTL 5.42e-02 0.229 0.118 0.869 NK_cytokine L2
ENSG00000137959 IFI44L 128972 sc-eQTL 7.30e-01 0.0292 0.0844 0.869 NK_cytokine L2
ENSG00000137965 IFI44 99098 sc-eQTL 6.86e-01 0.0363 0.0897 0.869 NK_cytokine L2
ENSG00000162613 FUBP1 769784 sc-eQTL 3.52e-01 -0.105 0.113 0.869 NK_cytokine L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 7.72e-01 0.0344 0.118 0.869 NK_cytokine L2
ENSG00000180488 MIGA1 969270 sc-eQTL 7.91e-01 -0.0344 0.129 0.869 NK_cytokine L2
ENSG00000077254 USP33 989042 sc-eQTL 3.64e-01 0.153 0.167 0.867 PB L2
ENSG00000137959 IFI44L 128972 sc-eQTL 6.32e-01 -0.0701 0.146 0.867 PB L2
ENSG00000137965 IFI44 99098 sc-eQTL 4.61e-01 0.0967 0.131 0.867 PB L2
ENSG00000162613 FUBP1 769784 sc-eQTL 3.89e-02 -0.325 0.156 0.867 PB L2
ENSG00000162614 NEXN 860381 sc-eQTL 9.36e-01 -0.0117 0.145 0.867 PB L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.06e-02 0.305 0.154 0.867 PB L2
ENSG00000180488 MIGA1 969270 sc-eQTL 1.78e-01 -0.245 0.181 0.867 PB L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 5.49e-01 -0.0961 0.16 0.867 PB L2
ENSG00000077254 USP33 989042 sc-eQTL 3.41e-01 0.124 0.13 0.87 Pro_T L2
ENSG00000137959 IFI44L 128972 sc-eQTL 3.23e-01 -0.0985 0.0995 0.87 Pro_T L2
ENSG00000137965 IFI44 99098 sc-eQTL 3.37e-02 0.229 0.107 0.87 Pro_T L2
ENSG00000162613 FUBP1 769784 sc-eQTL 1.92e-01 0.155 0.119 0.87 Pro_T L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 8.70e-01 0.0223 0.136 0.87 Pro_T L2
ENSG00000180488 MIGA1 969270 sc-eQTL 5.66e-01 0.0759 0.132 0.87 Pro_T L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 2.17e-01 0.127 0.102 0.87 Pro_T L2
ENSG00000077254 USP33 989042 sc-eQTL 4.08e-01 0.0994 0.12 0.87 Treg L2
ENSG00000137959 IFI44L 128972 sc-eQTL 6.64e-01 0.0409 0.094 0.87 Treg L2
ENSG00000137965 IFI44 99098 sc-eQTL 3.16e-01 0.0976 0.097 0.87 Treg L2
ENSG00000162613 FUBP1 769784 sc-eQTL 6.04e-01 0.0598 0.115 0.87 Treg L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.22e-01 0.198 0.127 0.87 Treg L2
ENSG00000180488 MIGA1 969270 sc-eQTL 9.93e-01 0.00108 0.131 0.87 Treg L2
ENSG00000077254 USP33 989042 sc-eQTL 8.83e-01 -0.0181 0.123 0.873 cDC L2
ENSG00000137959 IFI44L 128972 sc-eQTL 1.08e-01 0.149 0.092 0.873 cDC L2
ENSG00000137965 IFI44 99098 sc-eQTL 8.21e-01 -0.0212 0.0937 0.873 cDC L2
ENSG00000162613 FUBP1 769784 sc-eQTL 8.18e-01 0.0295 0.128 0.873 cDC L2
ENSG00000162614 NEXN 860381 sc-eQTL 1.13e-01 0.165 0.103 0.873 cDC L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.85e-01 -0.172 0.129 0.873 cDC L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.81e-01 -0.101 0.142 0.873 cDC L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 7.58e-01 -0.0404 0.131 0.873 cDC L2
ENSG00000077254 USP33 989042 sc-eQTL 1.98e-01 0.104 0.0807 0.87 cMono_IL1B L2
ENSG00000137959 IFI44L 128972 sc-eQTL 8.88e-01 0.0112 0.0791 0.87 cMono_IL1B L2
ENSG00000137965 IFI44 99098 sc-eQTL 3.31e-01 0.0805 0.0827 0.87 cMono_IL1B L2
ENSG00000162613 FUBP1 769784 sc-eQTL 9.44e-01 -0.00839 0.118 0.87 cMono_IL1B L2
ENSG00000162614 NEXN 860381 sc-eQTL 2.79e-01 0.103 0.0946 0.87 cMono_IL1B L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.73e-01 -0.068 0.121 0.87 cMono_IL1B L2
ENSG00000180488 MIGA1 969270 sc-eQTL 7.54e-01 0.041 0.131 0.87 cMono_IL1B L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 8.51e-01 0.0226 0.12 0.87 cMono_IL1B L2
ENSG00000077254 USP33 989042 sc-eQTL 5.08e-01 -0.0653 0.0987 0.87 cMono_S100A L2
ENSG00000137959 IFI44L 128972 sc-eQTL 4.02e-01 0.0681 0.081 0.87 cMono_S100A L2
ENSG00000137965 IFI44 99098 sc-eQTL 9.67e-01 -0.00329 0.0798 0.87 cMono_S100A L2
ENSG00000162613 FUBP1 769784 sc-eQTL 9.98e-01 -0.000305 0.119 0.87 cMono_S100A L2
ENSG00000162614 NEXN 860381 sc-eQTL 2.67e-01 0.114 0.102 0.87 cMono_S100A L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 7.11e-01 -0.0481 0.13 0.87 cMono_S100A L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.75e-01 -0.0947 0.132 0.87 cMono_S100A L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 9.48e-01 0.00848 0.129 0.87 cMono_S100A L2
ENSG00000077254 USP33 989042 sc-eQTL 7.27e-01 -0.0521 0.149 0.864 gdT L2
ENSG00000137959 IFI44L 128972 sc-eQTL 9.98e-01 -0.000378 0.136 0.864 gdT L2
ENSG00000137965 IFI44 99098 sc-eQTL 2.49e-02 0.308 0.136 0.864 gdT L2
ENSG00000162613 FUBP1 769784 sc-eQTL 6.94e-01 0.0601 0.153 0.864 gdT L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 3.24e-01 -0.144 0.146 0.864 gdT L2
ENSG00000180488 MIGA1 969270 sc-eQTL 3.63e-01 0.141 0.154 0.864 gdT L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 5.35e-01 0.0838 0.135 0.864 gdT L2
ENSG00000077254 USP33 989042 sc-eQTL 5.83e-02 -0.222 0.117 0.869 intMono L2
ENSG00000137959 IFI44L 128972 sc-eQTL 9.15e-01 0.00918 0.086 0.869 intMono L2
ENSG00000137965 IFI44 99098 sc-eQTL 7.06e-01 0.0317 0.0838 0.869 intMono L2
ENSG00000162613 FUBP1 769784 sc-eQTL 3.77e-01 -0.114 0.129 0.869 intMono L2
ENSG00000162614 NEXN 860381 sc-eQTL 4.62e-01 -0.0737 0.0999 0.869 intMono L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 9.28e-01 -0.0109 0.12 0.869 intMono L2
ENSG00000180488 MIGA1 969270 sc-eQTL 5.08e-01 0.0878 0.132 0.869 intMono L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 5.19e-01 0.0822 0.127 0.869 intMono L2
ENSG00000077254 USP33 989042 sc-eQTL 1.47e-01 -0.15 0.103 0.871 ncMono L2
ENSG00000137959 IFI44L 128972 sc-eQTL 7.60e-01 0.0248 0.0811 0.871 ncMono L2
ENSG00000137965 IFI44 99098 sc-eQTL 6.84e-01 0.0349 0.0855 0.871 ncMono L2
ENSG00000162613 FUBP1 769784 sc-eQTL 8.89e-01 0.0179 0.128 0.871 ncMono L2
ENSG00000162614 NEXN 860381 sc-eQTL 9.43e-02 0.182 0.108 0.871 ncMono L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 2.78e-02 0.272 0.123 0.871 ncMono L2
ENSG00000180488 MIGA1 969270 sc-eQTL 1.98e-01 0.173 0.134 0.871 ncMono L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 2.30e-01 0.151 0.125 0.871 ncMono L2
ENSG00000077254 USP33 989042 sc-eQTL 4.65e-01 0.103 0.14 0.864 pDC L2
ENSG00000137959 IFI44L 128972 sc-eQTL 5.49e-01 0.0643 0.107 0.864 pDC L2
ENSG00000137965 IFI44 99098 sc-eQTL 5.98e-01 0.0576 0.109 0.864 pDC L2
ENSG00000162613 FUBP1 769784 sc-eQTL 6.36e-01 -0.0648 0.137 0.864 pDC L2
ENSG00000162614 NEXN 860381 sc-eQTL 5.88e-01 0.0724 0.133 0.864 pDC L2
ENSG00000162616 DNAJB4 769719 sc-eQTL 7.98e-01 0.0356 0.138 0.864 pDC L2
ENSG00000180488 MIGA1 969270 sc-eQTL 4.62e-02 0.307 0.153 0.864 pDC L2
ENSG00000273338 AC103591.3 744340 sc-eQTL 3.68e-01 0.124 0.137 0.864 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000077254 USP33 989042 sc-eQTL 2.20e-01 -0.125 0.102 0.87 B_Memory LOneK1K
ENSG00000137959 IFI44L 128972 sc-eQTL 5.63e-01 0.0623 0.108 0.87 B_Memory LOneK1K
ENSG00000137965 IFI44 99098 sc-eQTL 1.93e-01 0.146 0.112 0.87 B_Memory LOneK1K
ENSG00000162613 FUBP1 769784 sc-eQTL 6.41e-01 -0.0519 0.111 0.87 B_Memory LOneK1K
ENSG00000162614 NEXN 860381 sc-eQTL 2.70e-01 0.14 0.127 0.87 B_Memory LOneK1K
ENSG00000162616 DNAJB4 769719 sc-eQTL 1.23e-01 0.204 0.132 0.87 B_Memory LOneK1K
ENSG00000180488 MIGA1 969270 sc-eQTL 2.65e-01 0.136 0.122 0.87 B_Memory LOneK1K
ENSG00000273338 AC103591.3 744340 sc-eQTL 9.19e-01 -0.0104 0.102 0.87 B_Memory LOneK1K
ENSG00000077254 USP33 989042 sc-eQTL 6.81e-02 0.183 0.0996 0.87 B_Naive LOneK1K
ENSG00000137959 IFI44L 128972 sc-eQTL 1.69e-01 0.136 0.0987 0.87 B_Naive LOneK1K
ENSG00000137965 IFI44 99098 sc-eQTL 9.73e-01 0.00343 0.103 0.87 B_Naive LOneK1K
ENSG00000162613 FUBP1 769784 sc-eQTL 4.32e-01 -0.0743 0.0943 0.87 B_Naive LOneK1K
ENSG00000162614 NEXN 860381 sc-eQTL 6.30e-01 -0.0584 0.121 0.87 B_Naive LOneK1K
ENSG00000162616 DNAJB4 769719 sc-eQTL 3.83e-01 0.116 0.132 0.87 B_Naive LOneK1K
ENSG00000180488 MIGA1 969270 sc-eQTL 6.23e-01 -0.0602 0.122 0.87 B_Naive LOneK1K
ENSG00000273338 AC103591.3 744340 sc-eQTL 6.88e-01 0.0381 0.0948 0.87 B_Naive LOneK1K
ENSG00000077254 USP33 989042 sc-eQTL 5.92e-01 0.0422 0.0785 0.87 CD14_Mono LOneK1K
ENSG00000137959 IFI44L 128972 sc-eQTL 6.31e-01 0.0374 0.0778 0.87 CD14_Mono LOneK1K
ENSG00000137965 IFI44 99098 sc-eQTL 4.79e-01 0.0567 0.0801 0.87 CD14_Mono LOneK1K
ENSG00000162613 FUBP1 769784 sc-eQTL 9.88e-01 -0.00162 0.104 0.87 CD14_Mono LOneK1K
ENSG00000162614 NEXN 860381 sc-eQTL 1.08e-01 0.148 0.0917 0.87 CD14_Mono LOneK1K
ENSG00000162616 DNAJB4 769719 sc-eQTL 5.46e-01 -0.0719 0.119 0.87 CD14_Mono LOneK1K
ENSG00000180488 MIGA1 969270 sc-eQTL 6.16e-01 -0.0615 0.122 0.87 CD14_Mono LOneK1K
ENSG00000273338 AC103591.3 744340 sc-eQTL 9.11e-01 0.0134 0.12 0.87 CD14_Mono LOneK1K
ENSG00000077254 USP33 989042 sc-eQTL 3.16e-02 -0.187 0.0865 0.871 CD16_Mono LOneK1K
ENSG00000137959 IFI44L 128972 sc-eQTL 7.03e-01 0.0313 0.082 0.871 CD16_Mono LOneK1K
ENSG00000137965 IFI44 99098 sc-eQTL 8.42e-01 0.0155 0.0779 0.871 CD16_Mono LOneK1K
ENSG00000162613 FUBP1 769784 sc-eQTL 7.37e-01 -0.0407 0.121 0.871 CD16_Mono LOneK1K
ENSG00000162614 NEXN 860381 sc-eQTL 9.55e-01 -0.00568 0.101 0.871 CD16_Mono LOneK1K
ENSG00000162616 DNAJB4 769719 sc-eQTL 2.72e-01 0.133 0.121 0.871 CD16_Mono LOneK1K
ENSG00000180488 MIGA1 969270 sc-eQTL 3.35e-01 0.121 0.125 0.871 CD16_Mono LOneK1K
ENSG00000273338 AC103591.3 744340 sc-eQTL 3.47e-01 0.121 0.128 0.871 CD16_Mono LOneK1K
ENSG00000077254 USP33 989042 sc-eQTL 2.05e-01 0.133 0.104 0.869 NK_CD56dim LOneK1K
ENSG00000137959 IFI44L 128972 sc-eQTL 4.70e-01 0.0612 0.0845 0.869 NK_CD56dim LOneK1K
ENSG00000137965 IFI44 99098 sc-eQTL 6.03e-01 0.0462 0.0886 0.869 NK_CD56dim LOneK1K
ENSG00000162613 FUBP1 769784 sc-eQTL 5.36e-01 -0.0554 0.0894 0.869 NK_CD56dim LOneK1K
ENSG00000162616 DNAJB4 769719 sc-eQTL 9.91e-01 -0.0012 0.112 0.869 NK_CD56dim LOneK1K
ENSG00000180488 MIGA1 969270 sc-eQTL 8.24e-01 -0.0264 0.119 0.869 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162613 \N 769784 2.74e-07 1.3e-07 3.59e-08 1.82e-07 9.65e-08 9.57e-08 1.44e-07 5.24e-08 1.41e-07 4.23e-08 1.56e-07 7.6e-08 1.47e-07 6.38e-08 6.25e-08 7.26e-08 5.1e-08 1.18e-07 5.21e-08 3.29e-08 1.05e-07 1.23e-07 1.26e-07 5.01e-08 1.31e-07 1.13e-07 1.1e-07 9.15e-08 9.88e-08 1.11e-07 9.58e-08 3.19e-08 2.74e-08 8.82e-08 9.24e-08 4.12e-08 4.95e-08 8.48e-08 8.42e-08 3.64e-08 3.58e-08 3.06e-07 4.01e-08 0.0 1.12e-07 1.68e-08 1.46e-07 4.96e-09 4.72e-08