Genes within 1Mb (chr1:78259707:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 576288 sc-eQTL 6.60e-01 0.125 0.283 0.052 PB L2
ENSG00000077254 USP33 499855 sc-eQTL 4.98e-02 -0.486 0.245 0.052 PB L2
ENSG00000137959 IFI44L -360215 sc-eQTL 2.54e-01 -0.247 0.215 0.052 PB L2
ENSG00000137965 IFI44 -390089 sc-eQTL 6.75e-01 -0.0817 0.194 0.052 PB L2
ENSG00000162613 FUBP1 280597 sc-eQTL 9.55e-01 -0.0132 0.235 0.052 PB L2
ENSG00000162614 NEXN 371194 sc-eQTL 8.25e-01 0.0476 0.214 0.052 PB L2
ENSG00000162616 DNAJB4 280532 sc-eQTL 8.96e-01 -0.0306 0.233 0.052 PB L2
ENSG00000180488 MIGA1 480083 sc-eQTL 2.35e-01 -0.321 0.269 0.052 PB L2
ENSG00000273338 AC103591.3 255153 sc-eQTL 6.94e-01 0.0936 0.237 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000036549 AC118549.1 576288 eQTL 0.0001 0.0858 0.022 0.00144 0.0 0.0623
ENSG00000077254 USP33 499855 eQTL 0.0134 -0.0529 0.0213 0.0 0.0 0.0623
ENSG00000137960 GIPC2 280165 pQTL 0.0103 0.11 0.0427 0.0 0.0 0.0632
ENSG00000154027 AK5 977688 eQTL 8e-07 0.189 0.0381 0.0 0.0 0.0623
ENSG00000162614 NEXN 371194 eQTL 0.0117 0.0781 0.0309 0.00212 0.0 0.0623


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000036549 AC118549.1 576288 4.89e-07 2.4e-07 7.72e-08 2.41e-07 1.09e-07 1.25e-07 3.33e-07 7.65e-08 2.53e-07 1.39e-07 2.84e-07 2.09e-07 3.95e-07 8.26e-08 1.01e-07 1.33e-07 8.64e-08 2.83e-07 9.19e-08 7.49e-08 1.35e-07 2.3e-07 2.11e-07 5.11e-08 3.41e-07 2e-07 1.72e-07 1.68e-07 1.76e-07 2.01e-07 1.71e-07 5.4e-08 4.98e-08 1.03e-07 1.22e-07 5.14e-08 5.76e-08 5.71e-08 4.74e-08 7.9e-08 3.27e-08 2.41e-07 3.46e-08 1.08e-08 6.21e-08 8.24e-09 8.94e-08 0.0 4.52e-08
ENSG00000154027 AK5 977688 2.74e-07 1.3e-07 4.69e-08 1.8e-07 9.24e-08 9.8e-08 1.53e-07 5.43e-08 1.45e-07 4.94e-08 1.54e-07 9e-08 1.47e-07 6.76e-08 6.04e-08 7.36e-08 3.93e-08 1.27e-07 5.82e-08 4.1e-08 1.13e-07 1.27e-07 1.39e-07 3.23e-08 1.46e-07 1.21e-07 1.07e-07 9.61e-08 1.12e-07 1.03e-07 9.7e-08 3.64e-08 3.56e-08 8.34e-08 7.51e-08 3.62e-08 5.03e-08 9.26e-08 6.54e-08 3.71e-08 5.14e-08 1.35e-07 5.27e-08 1.97e-08 5.15e-08 1.83e-08 1.21e-07 3.83e-09 4.9e-08