Genes within 1Mb (chr1:77610394:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 -73025 sc-eQTL 7.82e-01 -0.0565 0.204 0.051 CD8_TCM L2
ENSG00000077254 USP33 -149458 sc-eQTL 7.91e-01 -0.0545 0.205 0.051 CD8_TCM L2
ENSG00000142892 PIGK 390964 sc-eQTL 8.66e-02 -0.378 0.22 0.051 CD8_TCM L2
ENSG00000154027 AK5 328375 sc-eQTL 1.50e-01 0.289 0.2 0.051 CD8_TCM L2
ENSG00000162613 FUBP1 -368716 sc-eQTL 4.36e-02 0.376 0.185 0.051 CD8_TCM L2
ENSG00000162616 DNAJB4 -368781 sc-eQTL 9.93e-01 -0.00174 0.205 0.051 CD8_TCM L2
ENSG00000180488 MIGA1 -169230 sc-eQTL 5.50e-01 -0.125 0.209 0.051 CD8_TCM L2
ENSG00000273338 AC103591.3 -394160 sc-eQTL 6.72e-01 0.078 0.184 0.051 CD8_TCM L2
ENSG00000036549 AC118549.1 -73025 sc-eQTL 6.55e-01 -0.124 0.277 0.052 PB L2
ENSG00000077254 USP33 -149458 sc-eQTL 1.66e-01 -0.336 0.241 0.052 PB L2
ENSG00000142892 PIGK 390964 sc-eQTL 6.74e-01 0.0586 0.139 0.052 PB L2
ENSG00000162613 FUBP1 -368716 sc-eQTL 1.16e-01 0.361 0.227 0.052 PB L2
ENSG00000162614 NEXN -278119 sc-eQTL 6.87e-02 -0.38 0.207 0.052 PB L2
ENSG00000162616 DNAJB4 -368781 sc-eQTL 7.00e-01 -0.0878 0.228 0.052 PB L2
ENSG00000180488 MIGA1 -169230 sc-eQTL 6.19e-01 0.132 0.264 0.052 PB L2
ENSG00000273338 AC103591.3 -394160 sc-eQTL 6.17e-01 0.116 0.232 0.052 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000154027 AK5 328375 eQTL 0.000808 0.192 0.0571 0.0 0.0 0.026
ENSG00000162616 DNAJB4 -368781 eQTL 0.000144 -0.235 0.0615 0.0 0.0 0.026
ENSG00000226415 TPI1P1 910605 eQTL 2.95e-02 0.186 0.0851 0.0 0.0 0.026
ENSG00000273338 AC103591.3 -394160 eQTL 3.67e-02 -0.127 0.0606 0.0026 0.0 0.026


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000154027 AK5 328375 1.24e-06 9.44e-07 2.88e-07 4.03e-07 2.46e-07 4.63e-07 1.02e-06 3.45e-07 1.14e-06 3.76e-07 1.25e-06 5.71e-07 1.49e-06 2.65e-07 4.28e-07 5.69e-07 7.77e-07 5.53e-07 5.26e-07 6.39e-07 3.8e-07 9.57e-07 7.39e-07 5.25e-07 1.8e-06 3.02e-07 6.37e-07 5.67e-07 8.81e-07 1.08e-06 5.37e-07 1.86e-07 1.95e-07 3.91e-07 4.15e-07 3.36e-07 3.96e-07 1.67e-07 2.95e-07 8.98e-08 2.84e-07 1.22e-06 5.77e-08 2.61e-08 1.88e-07 1.34e-07 2.1e-07 8.18e-08 8.38e-08
ENSG00000273338 AC103591.3 -394160 1.04e-06 7.46e-07 1.59e-07 4.35e-07 9.9e-08 3.36e-07 6.23e-07 2.03e-07 6.53e-07 3.16e-07 9.46e-07 5.15e-07 9.79e-07 1.76e-07 3.35e-07 2.89e-07 5.63e-07 4.33e-07 3.06e-07 3.06e-07 2.55e-07 5.18e-07 4.4e-07 2.65e-07 1.14e-06 2.54e-07 4.34e-07 3.9e-07 5.03e-07 8.48e-07 3.77e-07 3.9e-08 6.78e-08 1.88e-07 3.68e-07 1.71e-07 1.86e-07 1.39e-07 1.14e-07 8.8e-09 1.45e-07 7.04e-07 6.68e-08 5.68e-09 1.89e-07 6.01e-08 1.41e-07 8.34e-08 6.03e-08