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Genes within 1Mb (chr1:76998889:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 -684530 sc-eQTL 3.21e-01 0.154 0.155 0.927 B L1
ENSG00000077254 USP33 -760963 sc-eQTL 4.02e-01 0.094 0.112 0.927 B L1
ENSG00000142892 PIGK -220541 sc-eQTL 8.23e-01 0.0268 0.12 0.927 B L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 1.79e-01 -0.15 0.111 0.927 B L1
ENSG00000162614 NEXN -889624 sc-eQTL 2.81e-01 0.16 0.148 0.927 B L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.33e-01 0.233 0.155 0.927 B L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 7.00e-01 -0.0515 0.133 0.927 B L1
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 6.19e-01 -0.0648 0.13 0.927 B L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.64e-01 0.197 0.141 0.927 CD4T L1
ENSG00000077254 USP33 -760963 sc-eQTL 3.00e-01 0.0934 0.0899 0.927 CD4T L1
ENSG00000142892 PIGK -220541 sc-eQTL 9.94e-01 0.000881 0.121 0.927 CD4T L1
ENSG00000154027 AK5 -283130 sc-eQTL 9.37e-01 -0.00735 0.0926 0.927 CD4T L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.60e-01 0.0261 0.0851 0.927 CD4T L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 2.49e-01 0.118 0.102 0.927 CD4T L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 4.63e-01 0.078 0.106 0.927 CD4T L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.05e-01 0.0876 0.131 0.927 CD8T L1
ENSG00000077254 USP33 -760963 sc-eQTL 3.25e-01 -0.123 0.125 0.927 CD8T L1
ENSG00000142892 PIGK -220541 sc-eQTL 1.20e-02 0.333 0.131 0.927 CD8T L1
ENSG00000154027 AK5 -283130 sc-eQTL 9.48e-01 -0.00536 0.0825 0.927 CD8T L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.79e-01 -0.0283 0.101 0.927 CD8T L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 6.83e-01 -0.0564 0.138 0.927 CD8T L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 6.38e-01 0.0654 0.139 0.927 CD8T L1
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 4.97e-01 -0.0872 0.128 0.927 CD8T L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.22e-01 0.101 0.158 0.932 DC L1
ENSG00000077254 USP33 -760963 sc-eQTL 5.03e-02 0.278 0.141 0.932 DC L1
ENSG00000142892 PIGK -220541 sc-eQTL 2.59e-01 0.188 0.166 0.932 DC L1
ENSG00000154027 AK5 -283130 sc-eQTL 2.39e-01 0.158 0.134 0.932 DC L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 8.99e-01 -0.0199 0.157 0.932 DC L1
ENSG00000162614 NEXN -889624 sc-eQTL 5.61e-01 -0.0875 0.15 0.932 DC L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 2.51e-01 0.188 0.163 0.932 DC L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.79e-01 -0.0979 0.176 0.932 DC L1
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 1.98e-01 -0.166 0.128 0.932 DC L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 9.98e-01 0.000416 0.162 0.927 Mono L1
ENSG00000077254 USP33 -760963 sc-eQTL 1.69e-01 -0.131 0.095 0.927 Mono L1
ENSG00000142892 PIGK -220541 sc-eQTL 2.00e-02 0.377 0.161 0.927 Mono L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 6.80e-01 -0.0545 0.132 0.927 Mono L1
ENSG00000162614 NEXN -889624 sc-eQTL 6.82e-01 -0.044 0.107 0.927 Mono L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 6.99e-01 0.0563 0.146 0.927 Mono L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 4.49e-01 0.112 0.147 0.927 Mono L1
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 7.49e-01 -0.0388 0.121 0.927 Mono L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.41e-01 0.126 0.163 0.927 NK L1
ENSG00000077254 USP33 -760963 sc-eQTL 7.76e-01 0.0366 0.129 0.927 NK L1
ENSG00000142892 PIGK -220541 sc-eQTL 1.81e-01 0.202 0.15 0.927 NK L1
ENSG00000154027 AK5 -283130 sc-eQTL 4.30e-01 0.126 0.16 0.927 NK L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 8.33e-01 0.0225 0.107 0.927 NK L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 8.66e-01 0.0247 0.147 0.927 NK L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 4.02e-01 0.118 0.141 0.927 NK L1
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.42e-01 0.231 0.156 0.927 Other_T L1
ENSG00000077254 USP33 -760963 sc-eQTL 7.73e-01 -0.0361 0.125 0.927 Other_T L1
ENSG00000142892 PIGK -220541 sc-eQTL 7.42e-02 0.222 0.124 0.927 Other_T L1
ENSG00000154027 AK5 -283130 sc-eQTL 3.91e-01 0.135 0.158 0.927 Other_T L1
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.60e-01 -0.00554 0.11 0.927 Other_T L1
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.15e-01 -0.263 0.166 0.927 Other_T L1
ENSG00000180488 MIGA1 -780735 sc-eQTL 6.76e-01 0.0678 0.162 0.927 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.77e-01 -0.102 0.183 0.923 B_Activated L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.24e-01 -0.0403 0.181 0.923 B_Activated L2
ENSG00000142892 PIGK -220541 sc-eQTL 7.76e-01 -0.049 0.172 0.923 B_Activated L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 2.02e-01 -0.223 0.174 0.923 B_Activated L2
ENSG00000162614 NEXN -889624 sc-eQTL 4.96e-01 -0.0969 0.142 0.923 B_Activated L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 4.56e-01 0.127 0.17 0.923 B_Activated L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 7.29e-01 -0.0635 0.183 0.923 B_Activated L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 3.06e-01 -0.155 0.151 0.923 B_Activated L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 8.06e-01 0.0409 0.166 0.927 B_Intermediate L2
ENSG00000077254 USP33 -760963 sc-eQTL 9.63e-01 -0.00688 0.15 0.927 B_Intermediate L2
ENSG00000142892 PIGK -220541 sc-eQTL 2.25e-01 -0.211 0.173 0.927 B_Intermediate L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 4.15e-01 -0.116 0.142 0.927 B_Intermediate L2
ENSG00000162614 NEXN -889624 sc-eQTL 9.67e-01 -0.00652 0.159 0.927 B_Intermediate L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 8.19e-01 0.0386 0.168 0.927 B_Intermediate L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 7.28e-01 0.0549 0.158 0.927 B_Intermediate L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 1.34e-01 -0.234 0.156 0.927 B_Intermediate L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.17e-01 -0.132 0.162 0.927 B_Memory L2
ENSG00000077254 USP33 -760963 sc-eQTL 5.86e-01 0.0857 0.157 0.927 B_Memory L2
ENSG00000142892 PIGK -220541 sc-eQTL 8.83e-01 -0.0255 0.174 0.927 B_Memory L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 8.22e-01 -0.0363 0.161 0.927 B_Memory L2
ENSG00000162614 NEXN -889624 sc-eQTL 4.49e-01 0.119 0.157 0.927 B_Memory L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 8.15e-01 -0.0382 0.163 0.927 B_Memory L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.15e-01 -0.164 0.163 0.927 B_Memory L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 7.38e-01 -0.0483 0.144 0.927 B_Memory L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.57e-01 0.119 0.16 0.927 B_Naive1 L2
ENSG00000077254 USP33 -760963 sc-eQTL 9.77e-01 0.00397 0.135 0.927 B_Naive1 L2
ENSG00000142892 PIGK -220541 sc-eQTL 7.83e-01 0.0456 0.166 0.927 B_Naive1 L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 5.03e-01 -0.0839 0.125 0.927 B_Naive1 L2
ENSG00000162614 NEXN -889624 sc-eQTL 5.63e-01 0.087 0.15 0.927 B_Naive1 L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.61e-01 0.229 0.163 0.927 B_Naive1 L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.33e-01 -0.0987 0.158 0.927 B_Naive1 L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 9.96e-01 -0.0007 0.143 0.927 B_Naive1 L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 2.25e-02 0.38 0.165 0.927 B_Naive2 L2
ENSG00000077254 USP33 -760963 sc-eQTL 2.02e-01 0.192 0.15 0.927 B_Naive2 L2
ENSG00000142892 PIGK -220541 sc-eQTL 9.71e-01 -0.0062 0.173 0.927 B_Naive2 L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 6.50e-01 -0.0653 0.144 0.927 B_Naive2 L2
ENSG00000162614 NEXN -889624 sc-eQTL 3.97e-01 0.124 0.147 0.927 B_Naive2 L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.20e-01 0.17 0.171 0.927 B_Naive2 L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.33e-01 -0.164 0.169 0.927 B_Naive2 L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 8.05e-01 -0.0389 0.158 0.927 B_Naive2 L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.01e-01 0.124 0.184 0.925 CD4_CTL L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.47e-01 -0.0336 0.174 0.925 CD4_CTL L2
ENSG00000142892 PIGK -220541 sc-eQTL 5.55e-01 -0.104 0.176 0.925 CD4_CTL L2
ENSG00000154027 AK5 -283130 sc-eQTL 5.99e-01 0.0833 0.158 0.925 CD4_CTL L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 5.76e-01 -0.0972 0.173 0.925 CD4_CTL L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.25e-01 0.168 0.17 0.925 CD4_CTL L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 2.03e-02 0.41 0.175 0.925 CD4_CTL L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 7.95e-02 0.257 0.146 0.927 CD4_Naive L2
ENSG00000077254 USP33 -760963 sc-eQTL 2.45e-01 0.128 0.109 0.927 CD4_Naive L2
ENSG00000142892 PIGK -220541 sc-eQTL 3.57e-01 0.115 0.125 0.927 CD4_Naive L2
ENSG00000154027 AK5 -283130 sc-eQTL 6.62e-01 -0.0469 0.107 0.927 CD4_Naive L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.48e-01 0.00609 0.0938 0.927 CD4_Naive L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.77e-01 0.0886 0.1 0.927 CD4_Naive L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.54e-01 0.0681 0.115 0.927 CD4_Naive L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 6.04e-01 0.083 0.16 0.927 CD4_TCM L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.04e-01 0.0298 0.12 0.927 CD4_TCM L2
ENSG00000142892 PIGK -220541 sc-eQTL 7.86e-01 -0.0468 0.172 0.927 CD4_TCM L2
ENSG00000154027 AK5 -283130 sc-eQTL 7.99e-01 0.0287 0.112 0.927 CD4_TCM L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.77e-01 0.034 0.12 0.927 CD4_TCM L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.40e-01 0.143 0.149 0.927 CD4_TCM L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 4.01e-01 -0.132 0.157 0.927 CD4_TCM L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 9.16e-01 0.0161 0.152 0.927 CD4_TEM L2
ENSG00000077254 USP33 -760963 sc-eQTL 4.70e-01 -0.113 0.156 0.927 CD4_TEM L2
ENSG00000142892 PIGK -220541 sc-eQTL 9.96e-02 -0.272 0.165 0.927 CD4_TEM L2
ENSG00000154027 AK5 -283130 sc-eQTL 8.69e-01 -0.0258 0.156 0.927 CD4_TEM L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 6.52e-01 0.0638 0.141 0.927 CD4_TEM L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.69e-01 -0.148 0.165 0.927 CD4_TEM L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.08e-01 -0.173 0.169 0.927 CD4_TEM L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 9.80e-01 0.00399 0.162 0.927 CD8_CTL L2
ENSG00000077254 USP33 -760963 sc-eQTL 7.28e-01 -0.0498 0.143 0.927 CD8_CTL L2
ENSG00000142892 PIGK -220541 sc-eQTL 1.29e-01 0.242 0.159 0.927 CD8_CTL L2
ENSG00000154027 AK5 -283130 sc-eQTL 7.81e-01 0.0419 0.15 0.927 CD8_CTL L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.22e-01 0.0128 0.131 0.927 CD8_CTL L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 5.53e-01 -0.0915 0.154 0.927 CD8_CTL L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 8.62e-01 -0.0249 0.143 0.927 CD8_CTL L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 2.68e-01 0.153 0.137 0.927 CD8_CTL L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.66e-01 0.0895 0.156 0.927 CD8_Naive L2
ENSG00000077254 USP33 -760963 sc-eQTL 9.65e-01 0.00646 0.146 0.927 CD8_Naive L2
ENSG00000142892 PIGK -220541 sc-eQTL 1.81e-01 0.198 0.148 0.927 CD8_Naive L2
ENSG00000154027 AK5 -283130 sc-eQTL 8.83e-01 0.0167 0.113 0.927 CD8_Naive L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.54e-01 -0.00713 0.124 0.927 CD8_Naive L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 6.10e-01 0.0758 0.148 0.927 CD8_Naive L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 7.05e-01 -0.0568 0.15 0.927 CD8_Naive L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 8.62e-01 0.0273 0.157 0.927 CD8_Naive L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 8.24e-01 -0.0406 0.182 0.928 CD8_TCM L2
ENSG00000077254 USP33 -760963 sc-eQTL 1.76e-01 -0.247 0.182 0.928 CD8_TCM L2
ENSG00000142892 PIGK -220541 sc-eQTL 5.13e-01 0.129 0.197 0.928 CD8_TCM L2
ENSG00000154027 AK5 -283130 sc-eQTL 6.77e-01 -0.0746 0.179 0.928 CD8_TCM L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.24e-01 0.0588 0.166 0.928 CD8_TCM L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 4.17e-01 -0.148 0.182 0.928 CD8_TCM L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 8.09e-01 -0.0452 0.186 0.928 CD8_TCM L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 5.11e-01 0.0843 0.128 0.928 CD8_TCM L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 3.44e-01 0.171 0.18 0.922 CD8_TEM L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.04e-02 -0.316 0.18 0.922 CD8_TEM L2
ENSG00000142892 PIGK -220541 sc-eQTL 5.19e-01 0.111 0.172 0.922 CD8_TEM L2
ENSG00000154027 AK5 -283130 sc-eQTL 5.09e-01 -0.0808 0.122 0.922 CD8_TEM L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.86e-01 0.00303 0.167 0.922 CD8_TEM L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 4.97e-01 -0.114 0.168 0.922 CD8_TEM L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 2.98e-01 0.186 0.178 0.922 CD8_TEM L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 4.36e-01 -0.0965 0.124 0.922 CD8_TEM L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 8.62e-01 -0.0292 0.168 0.929 MAIT L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.63e-01 0.0255 0.148 0.929 MAIT L2
ENSG00000142892 PIGK -220541 sc-eQTL 3.66e-01 0.151 0.167 0.929 MAIT L2
ENSG00000154027 AK5 -283130 sc-eQTL 9.77e-01 -0.00372 0.131 0.929 MAIT L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 6.88e-01 0.0646 0.16 0.929 MAIT L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.04e-03 -0.482 0.161 0.929 MAIT L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 1.55e-01 -0.233 0.163 0.929 MAIT L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 2.22e-01 -0.217 0.177 0.929 NK_CD56bright L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.67e-01 0.0298 0.177 0.929 NK_CD56bright L2
ENSG00000142892 PIGK -220541 sc-eQTL 9.02e-01 0.0226 0.183 0.929 NK_CD56bright L2
ENSG00000154027 AK5 -283130 sc-eQTL 3.50e-01 -0.148 0.158 0.929 NK_CD56bright L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 3.52e-01 -0.152 0.163 0.929 NK_CD56bright L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.78e-01 -0.228 0.169 0.929 NK_CD56bright L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 6.43e-01 -0.0761 0.164 0.929 NK_CD56bright L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.07e-01 0.275 0.17 0.927 NK_CD56dim L2
ENSG00000077254 USP33 -760963 sc-eQTL 3.74e-01 0.126 0.142 0.927 NK_CD56dim L2
ENSG00000142892 PIGK -220541 sc-eQTL 1.29e-01 0.244 0.16 0.927 NK_CD56dim L2
ENSG00000154027 AK5 -283130 sc-eQTL 4.16e-01 0.133 0.163 0.927 NK_CD56dim L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 4.10e-01 0.107 0.129 0.927 NK_CD56dim L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.99e-01 0.14 0.166 0.927 NK_CD56dim L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 2.45e-01 0.181 0.156 0.927 NK_CD56dim L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 9.18e-02 0.308 0.182 0.934 NK_HLA L2
ENSG00000077254 USP33 -760963 sc-eQTL 4.77e-01 0.128 0.18 0.934 NK_HLA L2
ENSG00000142892 PIGK -220541 sc-eQTL 2.77e-01 0.204 0.187 0.934 NK_HLA L2
ENSG00000154027 AK5 -283130 sc-eQTL 1.67e-01 0.235 0.169 0.934 NK_HLA L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 6.81e-02 -0.312 0.17 0.934 NK_HLA L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.78e-01 -0.225 0.166 0.934 NK_HLA L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 1.04e-01 -0.283 0.173 0.934 NK_HLA L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 6.79e-01 0.0719 0.173 0.927 NK_cytokine L2
ENSG00000077254 USP33 -760963 sc-eQTL 1.61e-01 0.217 0.154 0.927 NK_cytokine L2
ENSG00000142892 PIGK -220541 sc-eQTL 3.29e-01 0.159 0.162 0.927 NK_cytokine L2
ENSG00000154027 AK5 -283130 sc-eQTL 6.03e-01 0.0866 0.166 0.927 NK_cytokine L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 3.47e-01 0.138 0.146 0.927 NK_cytokine L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 2.63e-01 -0.172 0.154 0.927 NK_cytokine L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.89e-01 0.091 0.168 0.927 NK_cytokine L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 2.34e-01 0.253 0.211 0.915 PB L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.27e-01 -0.0408 0.187 0.915 PB L2
ENSG00000142892 PIGK -220541 sc-eQTL 4.82e-01 0.0751 0.106 0.915 PB L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 4.44e-01 0.135 0.176 0.915 PB L2
ENSG00000162614 NEXN -889624 sc-eQTL 3.59e-01 0.148 0.16 0.915 PB L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 7.86e-01 -0.0476 0.175 0.915 PB L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.88e-01 0.175 0.202 0.915 PB L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 6.92e-01 0.0583 0.147 0.915 PB L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.36e-02 0.329 0.169 0.926 Pro_T L2
ENSG00000077254 USP33 -760963 sc-eQTL 4.16e-01 -0.129 0.158 0.926 Pro_T L2
ENSG00000142892 PIGK -220541 sc-eQTL 1.43e-01 0.195 0.132 0.926 Pro_T L2
ENSG00000154027 AK5 -283130 sc-eQTL 3.61e-01 0.125 0.137 0.926 Pro_T L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.97e-01 -0.0374 0.145 0.926 Pro_T L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 5.56e-01 -0.0973 0.165 0.926 Pro_T L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 8.69e-01 0.0264 0.161 0.926 Pro_T L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 7.15e-01 0.0627 0.172 0.927 Treg L2
ENSG00000077254 USP33 -760963 sc-eQTL 8.67e-01 0.026 0.155 0.927 Treg L2
ENSG00000142892 PIGK -220541 sc-eQTL 5.31e-01 0.107 0.17 0.927 Treg L2
ENSG00000154027 AK5 -283130 sc-eQTL 8.36e-01 -0.0218 0.105 0.927 Treg L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.19e-01 0.0535 0.148 0.927 Treg L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 9.09e-01 -0.0188 0.165 0.927 Treg L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 8.61e-01 -0.0296 0.169 0.927 Treg L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.00e-01 0.133 0.196 0.934 cDC L2
ENSG00000077254 USP33 -760963 sc-eQTL 3.75e-01 0.15 0.168 0.934 cDC L2
ENSG00000142892 PIGK -220541 sc-eQTL 6.42e-01 0.0842 0.181 0.934 cDC L2
ENSG00000154027 AK5 -283130 sc-eQTL 8.20e-01 0.0337 0.148 0.934 cDC L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.25e-01 -0.0618 0.175 0.934 cDC L2
ENSG00000162614 NEXN -889624 sc-eQTL 9.78e-01 0.00393 0.142 0.934 cDC L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 9.25e-02 0.298 0.176 0.934 cDC L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.24e-01 -0.125 0.195 0.934 cDC L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 6.26e-01 0.0714 0.146 0.934 cDC L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.40e-02 0.407 0.164 0.927 cMono_IL1B L2
ENSG00000077254 USP33 -760963 sc-eQTL 3.93e-01 -0.0893 0.104 0.927 cMono_IL1B L2
ENSG00000142892 PIGK -220541 sc-eQTL 4.38e-01 0.13 0.167 0.927 cMono_IL1B L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 2.03e-01 -0.194 0.152 0.927 cMono_IL1B L2
ENSG00000162614 NEXN -889624 sc-eQTL 7.42e-01 -0.0403 0.123 0.927 cMono_IL1B L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 6.80e-01 0.0643 0.156 0.927 cMono_IL1B L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 5.93e-01 0.0904 0.169 0.927 cMono_IL1B L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 7.87e-01 -0.0366 0.135 0.927 cMono_IL1B L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.30e-01 -0.139 0.175 0.927 cMono_S100A L2
ENSG00000077254 USP33 -760963 sc-eQTL 1.43e-01 -0.186 0.126 0.927 cMono_S100A L2
ENSG00000142892 PIGK -220541 sc-eQTL 2.04e-02 0.371 0.159 0.927 cMono_S100A L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 5.81e-01 0.0846 0.153 0.927 cMono_S100A L2
ENSG00000162614 NEXN -889624 sc-eQTL 6.38e-01 0.0619 0.131 0.927 cMono_S100A L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 9.67e-01 0.00694 0.166 0.927 cMono_S100A L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.74e-01 0.151 0.17 0.927 cMono_S100A L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 9.08e-01 0.0158 0.137 0.927 cMono_S100A L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.98e-01 0.277 0.215 0.927 gdT L2
ENSG00000077254 USP33 -760963 sc-eQTL 2.08e-01 -0.257 0.203 0.927 gdT L2
ENSG00000142892 PIGK -220541 sc-eQTL 9.71e-01 -0.00799 0.218 0.927 gdT L2
ENSG00000154027 AK5 -283130 sc-eQTL 4.29e-01 0.129 0.163 0.927 gdT L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 2.26e-01 0.253 0.208 0.927 gdT L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 2.27e-01 0.242 0.2 0.927 gdT L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 9.95e-01 0.00123 0.212 0.927 gdT L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.60e-01 -0.141 0.19 0.927 intMono L2
ENSG00000077254 USP33 -760963 sc-eQTL 2.59e-01 -0.179 0.158 0.927 intMono L2
ENSG00000142892 PIGK -220541 sc-eQTL 5.32e-01 0.105 0.168 0.927 intMono L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 1.92e-02 -0.404 0.171 0.927 intMono L2
ENSG00000162614 NEXN -889624 sc-eQTL 9.15e-01 -0.0143 0.134 0.927 intMono L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 2.54e-01 -0.184 0.161 0.927 intMono L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 9.98e-02 0.292 0.177 0.927 intMono L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 8.85e-01 0.0234 0.162 0.927 intMono L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 5.20e-01 -0.118 0.183 0.93 ncMono L2
ENSG00000077254 USP33 -760963 sc-eQTL 1.05e-01 0.226 0.139 0.93 ncMono L2
ENSG00000142892 PIGK -220541 sc-eQTL 4.47e-01 -0.128 0.168 0.93 ncMono L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 9.81e-01 0.00411 0.173 0.93 ncMono L2
ENSG00000162614 NEXN -889624 sc-eQTL 4.58e-01 0.109 0.147 0.93 ncMono L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 7.74e-01 0.0482 0.168 0.93 ncMono L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 9.42e-01 -0.0133 0.181 0.93 ncMono L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 3.35e-02 -0.363 0.17 0.93 ncMono L2
ENSG00000036549 AC118549.1 -684530 sc-eQTL 7.77e-01 0.0566 0.199 0.941 pDC L2
ENSG00000077254 USP33 -760963 sc-eQTL 1.61e-01 0.286 0.203 0.941 pDC L2
ENSG00000142892 PIGK -220541 sc-eQTL 9.47e-01 0.0143 0.216 0.941 pDC L2
ENSG00000154027 AK5 -283130 sc-eQTL 3.45e-01 0.133 0.14 0.941 pDC L2
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.68e-01 0.0587 0.198 0.941 pDC L2
ENSG00000162614 NEXN -889624 sc-eQTL 1.14e-01 -0.305 0.192 0.941 pDC L2
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.73e-01 -0.179 0.2 0.941 pDC L2
ENSG00000180488 MIGA1 -780735 sc-eQTL 6.36e-01 0.106 0.224 0.941 pDC L2
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 7.93e-01 -0.0336 0.128 0.941 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 -684530 sc-eQTL 8.01e-01 -0.0405 0.161 0.927 B_Memory LOneK1K
ENSG00000077254 USP33 -760963 sc-eQTL 7.48e-01 0.0413 0.128 0.927 B_Memory LOneK1K
ENSG00000142892 PIGK -220541 sc-eQTL 2.49e-01 -0.194 0.168 0.927 B_Memory LOneK1K
ENSG00000162613 FUBP1 -980221 sc-eQTL 8.51e-02 -0.239 0.138 0.927 B_Memory LOneK1K
ENSG00000162614 NEXN -889624 sc-eQTL 3.53e-01 0.148 0.159 0.927 B_Memory LOneK1K
ENSG00000162616 DNAJB4 -980286 sc-eQTL 7.06e-01 0.0627 0.166 0.927 B_Memory LOneK1K
ENSG00000180488 MIGA1 -780735 sc-eQTL 6.29e-01 -0.074 0.153 0.927 B_Memory LOneK1K
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 3.11e-01 -0.157 0.155 0.927 B_Memory LOneK1K
ENSG00000036549 AC118549.1 -684530 sc-eQTL 1.03e-01 0.258 0.158 0.927 B_Naive LOneK1K
ENSG00000077254 USP33 -760963 sc-eQTL 6.26e-01 0.062 0.127 0.927 B_Naive LOneK1K
ENSG00000142892 PIGK -220541 sc-eQTL 8.69e-01 -0.0272 0.165 0.927 B_Naive LOneK1K
ENSG00000162613 FUBP1 -980221 sc-eQTL 4.75e-01 -0.0854 0.119 0.927 B_Naive LOneK1K
ENSG00000162614 NEXN -889624 sc-eQTL 4.04e-01 0.128 0.153 0.927 B_Naive LOneK1K
ENSG00000162616 DNAJB4 -980286 sc-eQTL 1.04e-01 0.271 0.166 0.927 B_Naive LOneK1K
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.33e-01 -0.15 0.154 0.927 B_Naive LOneK1K
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 6.24e-01 -0.0684 0.139 0.927 B_Naive LOneK1K
ENSG00000036549 AC118549.1 -684530 sc-eQTL 3.65e-01 0.149 0.165 0.927 CD14_Mono LOneK1K
ENSG00000077254 USP33 -760963 sc-eQTL 7.58e-02 -0.178 0.0998 0.927 CD14_Mono LOneK1K
ENSG00000142892 PIGK -220541 sc-eQTL 5.55e-02 0.306 0.159 0.927 CD14_Mono LOneK1K
ENSG00000162613 FUBP1 -980221 sc-eQTL 2.44e-01 -0.155 0.133 0.927 CD14_Mono LOneK1K
ENSG00000162614 NEXN -889624 sc-eQTL 7.67e-01 -0.0351 0.118 0.927 CD14_Mono LOneK1K
ENSG00000162616 DNAJB4 -980286 sc-eQTL 4.54e-01 0.114 0.152 0.927 CD14_Mono LOneK1K
ENSG00000180488 MIGA1 -780735 sc-eQTL 2.87e-01 0.167 0.156 0.927 CD14_Mono LOneK1K
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 8.47e-01 -0.024 0.124 0.927 CD14_Mono LOneK1K
ENSG00000036549 AC118549.1 -684530 sc-eQTL 4.96e-01 -0.121 0.178 0.927 CD16_Mono LOneK1K
ENSG00000077254 USP33 -760963 sc-eQTL 6.78e-01 -0.0491 0.118 0.927 CD16_Mono LOneK1K
ENSG00000142892 PIGK -220541 sc-eQTL 8.79e-01 0.0259 0.17 0.927 CD16_Mono LOneK1K
ENSG00000162613 FUBP1 -980221 sc-eQTL 3.20e-01 -0.162 0.163 0.927 CD16_Mono LOneK1K
ENSG00000162614 NEXN -889624 sc-eQTL 8.51e-01 -0.0255 0.136 0.927 CD16_Mono LOneK1K
ENSG00000162616 DNAJB4 -980286 sc-eQTL 3.34e-01 -0.158 0.163 0.927 CD16_Mono LOneK1K
ENSG00000180488 MIGA1 -780735 sc-eQTL 8.64e-01 0.029 0.169 0.927 CD16_Mono LOneK1K
ENSG00000184005 ST6GALNAC3 924143 sc-eQTL 5.32e-01 -0.107 0.171 0.927 CD16_Mono LOneK1K
ENSG00000036549 AC118549.1 -684530 sc-eQTL 2.08e-01 0.209 0.165 0.927 NK_CD56dim LOneK1K
ENSG00000077254 USP33 -760963 sc-eQTL 5.21e-01 0.0836 0.13 0.927 NK_CD56dim LOneK1K
ENSG00000142892 PIGK -220541 sc-eQTL 1.19e-01 0.229 0.147 0.927 NK_CD56dim LOneK1K
ENSG00000154027 AK5 -283130 sc-eQTL 3.24e-01 0.158 0.16 0.927 NK_CD56dim LOneK1K
ENSG00000162613 FUBP1 -980221 sc-eQTL 7.38e-01 0.0373 0.111 0.927 NK_CD56dim LOneK1K
ENSG00000162616 DNAJB4 -980286 sc-eQTL 7.73e-01 -0.0403 0.14 0.927 NK_CD56dim LOneK1K
ENSG00000180488 MIGA1 -780735 sc-eQTL 3.00e-01 0.153 0.147 0.927 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162616 DNAJB4 -980286 eQTL 0.0396 0.0935 0.0454 0.00103 0.0 0.0525
ENSG00000184005 ST6GALNAC3 924143 eQTL 0.00891 -0.0953 0.0364 0.00251 0.0 0.0525
ENSG00000235927 NEXN-AS1 -890650 eQTL 0.0433 0.0982 0.0485 0.0 0.0 0.0525

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina