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Genes within 1Mb (chr1:76757584:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000036549 AC118549.1 -925835 sc-eQTL 7.25e-02 0.389 0.215 0.059 B_Activated L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 1.87e-01 -0.253 0.191 0.059 B_Activated L2
ENSG00000142892 PIGK -461846 sc-eQTL 1.39e-01 -0.302 0.203 0.059 B_Activated L2
ENSG00000184005 ST6GALNAC3 682838 sc-eQTL 6.31e-01 -0.0866 0.18 0.059 B_Activated L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 5.51e-01 -0.133 0.223 0.05 CD4_CTL L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 7.78e-01 0.0538 0.191 0.05 CD4_CTL L2
ENSG00000142892 PIGK -461846 sc-eQTL 6.43e-01 -0.0991 0.213 0.05 CD4_CTL L2
ENSG00000154027 AK5 -524435 sc-eQTL 4.34e-01 0.151 0.192 0.05 CD4_CTL L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 8.74e-01 -0.0359 0.227 0.05 CD8_TEM L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 2.42e-01 0.229 0.195 0.05 CD8_TEM L2
ENSG00000142892 PIGK -461846 sc-eQTL 6.69e-01 -0.0927 0.217 0.05 CD8_TEM L2
ENSG00000154027 AK5 -524435 sc-eQTL 4.96e-01 0.105 0.154 0.05 CD8_TEM L2
ENSG00000184005 ST6GALNAC3 682838 sc-eQTL 6.87e-01 -0.0627 0.155 0.05 CD8_TEM L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 3.46e-01 0.206 0.218 0.051 NK_CD56bright L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 2.28e-01 -0.22 0.182 0.051 NK_CD56bright L2
ENSG00000142892 PIGK -461846 sc-eQTL 1.87e-01 -0.297 0.224 0.051 NK_CD56bright L2
ENSG00000154027 AK5 -524435 sc-eQTL 5.38e-01 0.12 0.194 0.051 NK_CD56bright L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 4.28e-01 0.17 0.214 0.05 NK_HLA L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 6.41e-01 -0.0803 0.172 0.05 NK_HLA L2
ENSG00000142892 PIGK -461846 sc-eQTL 5.89e-01 0.119 0.219 0.05 NK_HLA L2
ENSG00000154027 AK5 -524435 sc-eQTL 2.64e-03 0.592 0.194 0.05 NK_HLA L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 2.61e-01 0.323 0.286 0.052 PB L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 6.89e-02 -0.418 0.228 0.052 PB L2
ENSG00000142892 PIGK -461846 sc-eQTL 7.47e-01 -0.0465 0.144 0.052 PB L2
ENSG00000184005 ST6GALNAC3 682838 sc-eQTL 5.44e-01 -0.12 0.198 0.052 PB L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 3.92e-01 0.186 0.216 0.05 Pro_T L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 3.10e-01 -0.206 0.202 0.05 Pro_T L2
ENSG00000142892 PIGK -461846 sc-eQTL 6.75e-01 -0.0706 0.168 0.05 Pro_T L2
ENSG00000154027 AK5 -524435 sc-eQTL 1.06e-01 0.28 0.173 0.05 Pro_T L2
ENSG00000036549 AC118549.1 -925835 sc-eQTL 1.62e-01 0.311 0.221 0.051 intMono L2
ENSG00000137955 RABGGTB 971387 sc-eQTL 1.70e-01 -0.281 0.204 0.051 intMono L2
ENSG00000142892 PIGK -461846 sc-eQTL 5.13e-01 -0.129 0.197 0.051 intMono L2
ENSG00000184005 ST6GALNAC3 682838 sc-eQTL 8.17e-01 0.0439 0.19 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142892 PIGK -461846 eQTL 0.00437 0.104 0.0363 0.0 0.0 0.0628
ENSG00000154027 AK5 -524435 eQTL 1.49e-05 0.161 0.037 0.0 0.0 0.0628

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000154027 AK5 -524435 5.85e-07 3.12e-07 9.16e-08 2.62e-07 1.07e-07 1.5e-07 4.09e-07 1.01e-07 3.03e-07 1.89e-07 4.13e-07 2.98e-07 5.39e-07 9.48e-08 1.45e-07 1.84e-07 1.35e-07 3.3e-07 1.51e-07 8.11e-08 1.68e-07 2.86e-07 2.67e-07 1.15e-07 4.54e-07 2.33e-07 1.97e-07 1.95e-07 2.66e-07 3.15e-07 1.95e-07 6.78e-08 5.86e-08 1.19e-07 1.76e-07 6.33e-08 7.63e-08 6e-08 6.08e-08 5.64e-08 4.63e-08 3.26e-07 2.89e-08 1.56e-08 8.24e-08 9.12e-09 9.68e-08 2.71e-09 5.61e-08