JOB

Genes within 1Mb (chr1:70477179:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution
ENSG00000066557	LRRC40	271600	sc-eQTL	1.68e-01	-0.281	0.203	0.051	B_Activated	L2
ENSG00000116754	SRSF11	271497	sc-eQTL	7.31e-01	0.0746	0.216	0.051	B_Activated	L2
ENSG00000118454	ANKRD13C	122445	sc-eQTL	4.29e-01	0.172	0.217	0.051	B_Activated	L2
ENSG00000132485	ZRANB2	-604110	sc-eQTL	9.03e-01	0.0268	0.22	0.051	B_Activated	L2
ENSG00000197568	HHLA3	122374	sc-eQTL	5.04e-01	-0.122	0.182	0.051	B_Activated	L2
ENSG00000066557	LRRC40	271600	sc-eQTL	1.91e-01	-0.286	0.217	0.05	CD4_CTL	L2
ENSG00000116754	SRSF11	271497	sc-eQTL	4.24e-01	-0.181	0.226	0.05	CD4_CTL	L2
ENSG00000116761	CTH	65961	sc-eQTL	8.50e-01	-0.0358	0.19	0.05	CD4_CTL	L2
ENSG00000118454	ANKRD13C	122445	sc-eQTL	5.40e-01	-0.128	0.209	0.05	CD4_CTL	L2
ENSG00000132485	ZRANB2	-604110	sc-eQTL	5.98e-01	-0.12	0.226	0.05	CD4_CTL	L2
ENSG00000197568	HHLA3	122374	sc-eQTL	2.60e-01	0.238	0.211	0.05	CD4_CTL	L2
ENSG00000066557	LRRC40	271600	sc-eQTL	1.30e-01	0.37	0.243	0.056	PB	L2
ENSG00000116754	SRSF11	271497	sc-eQTL	1.65e-01	0.305	0.219	0.056	PB	L2
ENSG00000118454	ANKRD13C	122445	sc-eQTL	7.52e-01	-0.0789	0.249	0.056	PB	L2
ENSG00000132485	ZRANB2	-604110	sc-eQTL	2.50e-01	0.202	0.174	0.056	PB	L2
ENSG00000197568	HHLA3	122374	sc-eQTL	3.08e-01	0.24	0.235	0.056	PB	L2

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
ENSG00000116761	CTH	65961	eQTL	0.0229	-0.165	0.0725	0.0	0.0	0.0481

Expression Modifier Score(EMS) for GTEx 49tissues

Gene ID	Gene Symbol	TSS Distance	Whole Blood	Muscle Skeletal	Liver	Brain Cerebellum	Prostate	Spleen	Skin Sun Exposed Lower leg	Artery Coronary	Esophagus Muscularis	Esophagus Gastroesophageal Junction	Artery Tibial	Heart Atrial Appendage	Nerve Tibial	Heart Left Ventricle	Adrenal Gland	Adipose Visceral Omentum	Pancreas	Lung	Pituitary	Brain Nucleus accumbens basal ganglia	Colon Transverse	Adipose Subcutaneous	Esophagus Mucosa	Brain Cortex	Thyroid	Stomach	Breast Mammary Tissue	Colon Sigmoid	Skin Not Sun Exposed Suprapubic	Testis	Artery Aorta	Brain Amygdala	Brain Anterior cingulate cortex BA24	Brain Caudate basal ganglia	Brain Cerebellar Hemisphere	Brain Frontal Cortex BA9	Brain Hippocampus	Brain Hypothalamus	Brain Putamen basal ganglia	Brain Spinal cord cervical c-1	Brain Substantia nigra	Cells Cultured fibroblasts	Cells EBV-transformed lymphocytes	Kidney Cortex	Minor Salivary Gland	Ovary	Small Intestine Terminal Ileum	Uterus	Vagina