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Genes within 1Mb (chr1:70059953:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -145626 sc-eQTL 5.57e-01 -0.0446 0.0759 0.504 B L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 7.99e-04 0.195 0.0573 0.504 B L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.62e-01 0.077 0.0684 0.504 B L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.14e-01 0.094 0.0754 0.504 B L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 5.85e-01 0.0345 0.063 0.504 CD4T L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.04e-06 0.235 0.0468 0.504 CD4T L1
ENSG00000116761 CTH -351265 sc-eQTL 1.26e-02 0.125 0.0495 0.504 CD4T L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.14e-01 0.0463 0.0458 0.504 CD4T L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.27e-01 -0.0771 0.0635 0.504 CD4T L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 5.65e-01 -0.0408 0.0708 0.504 CD8T L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 2.78e-02 0.129 0.0583 0.504 CD8T L1
ENSG00000116761 CTH -351265 sc-eQTL 1.46e-03 0.182 0.0563 0.504 CD8T L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.36e-01 -0.0536 0.0556 0.504 CD8T L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.50e-01 0.03 0.0661 0.504 CD8T L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 3.95e-01 -0.0763 0.0895 0.502 DC L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 4.83e-01 -0.042 0.0598 0.502 DC L1
ENSG00000116761 CTH -351265 sc-eQTL 6.40e-01 -0.0361 0.0772 0.502 DC L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 5.70e-01 -0.0464 0.0816 0.502 DC L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 4.66e-01 0.059 0.0809 0.502 DC L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 9.18e-02 -0.138 0.0813 0.504 Mono L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 5.52e-01 -0.0282 0.0474 0.504 Mono L1
ENSG00000116761 CTH -351265 sc-eQTL 1.68e-01 0.0896 0.0647 0.504 Mono L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 1.20e-01 0.119 0.0765 0.504 Mono L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 9.68e-01 -0.00291 0.0717 0.504 NK L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 4.43e-02 0.127 0.0626 0.504 NK L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 4.41e-01 0.0489 0.0634 0.504 NK L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 5.68e-01 -0.0456 0.0797 0.504 NK L1
ENSG00000066557 LRRC40 -145626 sc-eQTL 1.34e-01 -0.127 0.0848 0.504 Other_T L1
ENSG00000116754 SRSF11 -145729 sc-eQTL 8.13e-01 0.0159 0.067 0.504 Other_T L1
ENSG00000116761 CTH -351265 sc-eQTL 5.09e-01 0.0503 0.0761 0.504 Other_T L1
ENSG00000118454 ANKRD13C -294781 sc-eQTL 4.48e-01 0.0613 0.0807 0.504 Other_T L1
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.71e-01 -0.0364 0.0855 0.504 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -145626 sc-eQTL 7.81e-02 -0.16 0.0902 0.51 B_Activated L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 2.60e-01 0.108 0.0961 0.51 B_Activated L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.61e-01 0.0888 0.0969 0.51 B_Activated L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 1.38e-01 0.121 0.0809 0.51 B_Activated L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 9.21e-01 -0.00857 0.0869 0.504 B_Intermediate L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 2.68e-01 0.0819 0.0738 0.504 B_Intermediate L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.89e-02 0.173 0.0833 0.504 B_Intermediate L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 4.25e-02 0.178 0.0874 0.504 B_Intermediate L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.61e-01 -0.102 0.0909 0.502 B_Memory L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.19e-01 0.126 0.0803 0.502 B_Memory L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 9.51e-01 0.00463 0.0748 0.502 B_Memory L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 8.02e-01 0.0215 0.0858 0.502 B_Memory L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 4.51e-01 -0.0645 0.0854 0.504 B_Naive1 L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.15e-01 0.107 0.0675 0.504 B_Naive1 L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 9.64e-01 -0.0033 0.0724 0.504 B_Naive1 L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.21e-01 -0.0411 0.0828 0.504 B_Naive1 L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 6.16e-01 0.0454 0.0905 0.502 B_Naive2 L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.45e-03 0.232 0.0783 0.502 B_Naive2 L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.73e-01 0.0835 0.0935 0.502 B_Naive2 L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 7.61e-01 -0.0262 0.0859 0.502 B_Naive2 L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 3.09e-02 0.188 0.0864 0.495 CD4_CTL L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 2.71e-01 0.0999 0.0905 0.495 CD4_CTL L2
ENSG00000116761 CTH -351265 sc-eQTL 8.61e-01 -0.0133 0.0761 0.495 CD4_CTL L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 1.81e-02 0.197 0.0827 0.495 CD4_CTL L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 1.04e-01 -0.138 0.0843 0.495 CD4_CTL L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 6.75e-01 0.0298 0.071 0.504 CD4_Naive L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 7.13e-07 0.248 0.0486 0.504 CD4_Naive L2
ENSG00000116761 CTH -351265 sc-eQTL 3.62e-02 0.114 0.054 0.504 CD4_Naive L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 4.37e-01 0.0423 0.0542 0.504 CD4_Naive L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 4.49e-01 -0.0515 0.0679 0.504 CD4_Naive L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.65e-01 0.0929 0.0832 0.504 CD4_TCM L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.22e-03 0.197 0.0601 0.504 CD4_TCM L2
ENSG00000116761 CTH -351265 sc-eQTL 3.78e-01 0.0596 0.0674 0.504 CD4_TCM L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 7.77e-01 0.0181 0.064 0.504 CD4_TCM L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.61e-01 -0.0942 0.0836 0.504 CD4_TCM L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 1.40e-01 -0.125 0.0845 0.504 CD4_TEM L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.54e-01 0.106 0.0737 0.504 CD4_TEM L2
ENSG00000116761 CTH -351265 sc-eQTL 2.03e-01 0.096 0.0752 0.504 CD4_TEM L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.28e-01 0.0903 0.0746 0.504 CD4_TEM L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.50e-01 0.0387 0.0851 0.504 CD4_TEM L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 5.40e-01 0.0485 0.0789 0.504 CD8_CTL L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.10e-01 0.119 0.0743 0.504 CD8_CTL L2
ENSG00000116761 CTH -351265 sc-eQTL 1.92e-01 0.0948 0.0725 0.504 CD8_CTL L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 6.07e-02 0.159 0.0846 0.504 CD8_CTL L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.27e-01 0.0414 0.085 0.504 CD8_CTL L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 5.29e-01 -0.055 0.0872 0.504 CD8_Naive L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.11e-01 0.0659 0.0648 0.504 CD8_Naive L2
ENSG00000116761 CTH -351265 sc-eQTL 9.43e-04 0.222 0.0662 0.504 CD8_Naive L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 9.36e-02 -0.106 0.0631 0.504 CD8_Naive L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 6.58e-01 0.0322 0.0727 0.504 CD8_Naive L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 7.38e-01 0.0315 0.094 0.505 CD8_TCM L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 9.34e-01 0.00716 0.0866 0.505 CD8_TCM L2
ENSG00000116761 CTH -351265 sc-eQTL 5.06e-01 0.0575 0.0863 0.505 CD8_TCM L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 8.69e-01 0.015 0.0903 0.505 CD8_TCM L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 9.57e-01 0.00496 0.0917 0.505 CD8_TCM L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.51e-01 0.102 0.0883 0.505 CD8_TEM L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 7.76e-01 -0.0236 0.0827 0.505 CD8_TEM L2
ENSG00000116761 CTH -351265 sc-eQTL 5.08e-01 0.0527 0.0796 0.505 CD8_TEM L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 8.13e-01 0.0218 0.0918 0.505 CD8_TEM L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.27e-01 -0.105 0.087 0.505 CD8_TEM L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 4.47e-01 -0.067 0.0879 0.504 MAIT L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 8.44e-01 0.017 0.0863 0.504 MAIT L2
ENSG00000116761 CTH -351265 sc-eQTL 1.76e-01 0.0986 0.0727 0.504 MAIT L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 9.42e-01 -0.00594 0.0809 0.504 MAIT L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 4.93e-01 -0.0539 0.0784 0.504 MAIT L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 7.75e-01 0.0262 0.0915 0.5 NK_CD56bright L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 6.97e-03 0.216 0.0792 0.5 NK_CD56bright L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 9.08e-01 -0.0104 0.0907 0.5 NK_CD56bright L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.14e-01 0.108 0.0869 0.5 NK_CD56bright L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 9.68e-01 0.00308 0.0767 0.502 NK_CD56dim L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.63e-01 0.0678 0.0744 0.502 NK_CD56dim L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.03e-01 0.0951 0.0745 0.502 NK_CD56dim L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 4.04e-01 -0.0736 0.0881 0.502 NK_CD56dim L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 3.86e-02 -0.185 0.0891 0.5 NK_HLA L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 4.57e-01 0.0605 0.0811 0.5 NK_HLA L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.37e-01 0.109 0.0918 0.5 NK_HLA L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 7.35e-01 -0.0306 0.0903 0.5 NK_HLA L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 3.88e-01 -0.0754 0.0872 0.502 NK_cytokine L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.78e-01 0.101 0.0743 0.502 NK_cytokine L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.34e-01 -0.0997 0.0835 0.502 NK_cytokine L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.95e-01 -0.0852 0.0812 0.502 NK_cytokine L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 4.62e-01 0.0816 0.111 0.493 PB L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 8.98e-01 -0.0128 0.0998 0.493 PB L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.86e-01 -0.0977 0.112 0.493 PB L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 5.59e-01 0.0624 0.106 0.493 PB L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 1.32e-01 -0.131 0.0869 0.509 Pro_T L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.89e-01 -0.0989 0.0751 0.509 Pro_T L2
ENSG00000116761 CTH -351265 sc-eQTL 2.31e-01 -0.0824 0.0685 0.509 Pro_T L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 3.16e-01 -0.0884 0.088 0.509 Pro_T L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.89e-01 -0.0927 0.0872 0.509 Pro_T L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 6.98e-01 0.0353 0.0908 0.504 Treg L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 6.09e-01 -0.0389 0.0759 0.504 Treg L2
ENSG00000116761 CTH -351265 sc-eQTL 6.41e-02 0.112 0.0602 0.504 Treg L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 8.97e-01 -0.0103 0.0797 0.504 Treg L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 9.14e-01 -0.00953 0.0881 0.504 Treg L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 8.96e-01 0.0114 0.087 0.515 cDC L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.58e-01 -0.0598 0.065 0.515 cDC L2
ENSG00000116761 CTH -351265 sc-eQTL 5.56e-01 -0.0465 0.0789 0.515 cDC L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 1.74e-01 -0.126 0.0919 0.515 cDC L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 1.64e-01 -0.117 0.0839 0.515 cDC L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.34e-01 -0.099 0.0829 0.504 cMono_IL1B L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 9.23e-02 -0.0924 0.0547 0.504 cMono_IL1B L2
ENSG00000116761 CTH -351265 sc-eQTL 1.53e-01 0.0977 0.0681 0.504 cMono_IL1B L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.79e-01 0.0877 0.0808 0.504 cMono_IL1B L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.09e-02 -0.206 0.0884 0.504 cMono_S100A L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 7.78e-01 0.0181 0.064 0.504 cMono_S100A L2
ENSG00000116761 CTH -351265 sc-eQTL 8.16e-02 -0.135 0.0772 0.504 cMono_S100A L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 1.00e+00 -1.68e-05 0.0913 0.504 cMono_S100A L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 4.53e-01 -0.0804 0.107 0.494 gdT L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.84e-02 0.238 0.0998 0.494 gdT L2
ENSG00000116761 CTH -351265 sc-eQTL 4.32e-01 0.0772 0.0979 0.494 gdT L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 5.52e-01 0.0631 0.106 0.494 gdT L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 8.68e-01 0.0165 0.0991 0.494 gdT L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 4.75e-01 0.0622 0.0869 0.509 intMono L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.89e-01 0.0654 0.0759 0.509 intMono L2
ENSG00000116761 CTH -351265 sc-eQTL 5.80e-01 0.0376 0.0679 0.509 intMono L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 2.03e-01 0.112 0.0881 0.509 intMono L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 9.69e-01 -0.00349 0.0907 0.511 ncMono L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 4.66e-01 0.051 0.0699 0.511 ncMono L2
ENSG00000116761 CTH -351265 sc-eQTL 8.10e-02 0.122 0.0694 0.511 ncMono L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 5.13e-02 0.153 0.078 0.511 ncMono L2
ENSG00000066557 LRRC40 -145626 sc-eQTL 7.17e-01 -0.0362 0.0996 0.503 pDC L2
ENSG00000116754 SRSF11 -145729 sc-eQTL 8.33e-01 -0.0178 0.0843 0.503 pDC L2
ENSG00000116761 CTH -351265 sc-eQTL 9.54e-01 -0.00442 0.0767 0.503 pDC L2
ENSG00000118454 ANKRD13C -294781 sc-eQTL 7.61e-01 -0.0309 0.101 0.503 pDC L2
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.67e-01 0.0988 0.0887 0.503 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.56e-01 -0.0948 0.0831 0.504 B_Memory LOneK1K
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.55e-01 0.104 0.0728 0.504 B_Memory LOneK1K
ENSG00000118454 ANKRD13C -294781 sc-eQTL 7.15e-03 0.21 0.0774 0.504 B_Memory LOneK1K
ENSG00000197568 HHLA3 -294852 sc-eQTL 1.10e-01 0.138 0.0858 0.504 B_Memory LOneK1K
ENSG00000066557 LRRC40 -145626 sc-eQTL 8.75e-01 -0.0129 0.0824 0.504 B_Naive LOneK1K
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.43e-02 0.148 0.0692 0.504 B_Naive LOneK1K
ENSG00000118454 ANKRD13C -294781 sc-eQTL 8.91e-01 0.00974 0.0707 0.504 B_Naive LOneK1K
ENSG00000197568 HHLA3 -294852 sc-eQTL 7.10e-01 -0.0296 0.0794 0.504 B_Naive LOneK1K
ENSG00000066557 LRRC40 -145626 sc-eQTL 2.93e-02 -0.181 0.0823 0.504 CD14_Mono LOneK1K
ENSG00000116754 SRSF11 -145729 sc-eQTL 3.46e-01 -0.0471 0.0498 0.504 CD14_Mono LOneK1K
ENSG00000116761 CTH -351265 sc-eQTL 2.75e-01 0.0716 0.0655 0.504 CD14_Mono LOneK1K
ENSG00000118454 ANKRD13C -294781 sc-eQTL 6.37e-01 0.0394 0.0835 0.504 CD14_Mono LOneK1K
ENSG00000066557 LRRC40 -145626 sc-eQTL 7.33e-01 0.0287 0.0839 0.506 CD16_Mono LOneK1K
ENSG00000116754 SRSF11 -145729 sc-eQTL 4.83e-01 0.0456 0.0649 0.506 CD16_Mono LOneK1K
ENSG00000116761 CTH -351265 sc-eQTL 1.34e-01 0.0949 0.0631 0.506 CD16_Mono LOneK1K
ENSG00000118454 ANKRD13C -294781 sc-eQTL 1.21e-01 0.122 0.0781 0.506 CD16_Mono LOneK1K
ENSG00000066557 LRRC40 -145626 sc-eQTL 6.18e-01 -0.0374 0.075 0.502 NK_CD56dim LOneK1K
ENSG00000116754 SRSF11 -145729 sc-eQTL 1.32e-01 0.0981 0.065 0.502 NK_CD56dim LOneK1K
ENSG00000118454 ANKRD13C -294781 sc-eQTL 4.95e-01 0.0453 0.0662 0.502 NK_CD56dim LOneK1K
ENSG00000197568 HHLA3 -294852 sc-eQTL 2.92e-01 -0.0852 0.0806 0.502 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000033122 LRRC7 491692 eQTL 0.0334 -0.082 0.0385 0.0 0.0 0.497
ENSG00000066557 LRRC40 -145626 eQTL 0.000545 0.0499 0.0144 0.0 0.0 0.497
ENSG00000116761 CTH -351265 eQTL 0.646 0.0135 0.0293 0.00121 0.0 0.497

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066557 LRRC40 -145626 4.32e-06 4.35e-06 7.1e-07 2.46e-06 1.59e-06 1.23e-06 3.33e-06 1.14e-06 4.96e-06 2.44e-06 4.33e-06 3.56e-06 7.06e-06 1.96e-06 1.39e-06 3.81e-06 2e-06 3.18e-06 1.55e-06 1.19e-06 3.06e-06 4.73e-06 3.67e-06 1.47e-06 4.84e-06 1.95e-06 2.49e-06 1.78e-06 4.28e-06 3.86e-06 2.19e-06 4.51e-07 5.21e-07 1.95e-06 2e-06 1.18e-06 1.08e-06 4.59e-07 8.6e-07 5.64e-07 8.27e-07 4.8e-06 4.01e-07 1.53e-07 7.7e-07 9.16e-07 1.08e-06 7.35e-07 5.83e-07