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Genes within 1Mb (chr1:69907279:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.73e-01 -0.0116 0.0729 0.47 B L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 2.16e-01 -0.0699 0.0563 0.47 B L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.80e-01 0.0883 0.0656 0.47 B L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.36e-01 0.0861 0.0724 0.47 B L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.86e-01 -0.0166 0.0612 0.47 CD4T L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 2.17e-02 -0.11 0.0475 0.47 CD4T L1
ENSG00000116761 CTH -503939 sc-eQTL 7.11e-01 0.0181 0.0487 0.47 CD4T L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.08e-01 0.0716 0.0443 0.47 CD4T L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 6.23e-03 0.168 0.0608 0.47 CD4T L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 1.80e-01 0.0926 0.0688 0.47 CD8T L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.03e-01 -0.0936 0.0572 0.47 CD8T L1
ENSG00000116761 CTH -503939 sc-eQTL 2.42e-02 0.126 0.0556 0.47 CD8T L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 4.38e-02 0.109 0.0538 0.47 CD8T L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.75e-02 0.152 0.0636 0.47 CD8T L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 1.21e-01 0.139 0.0893 0.484 DC L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 7.01e-01 -0.0231 0.06 0.484 DC L1
ENSG00000116761 CTH -503939 sc-eQTL 9.08e-01 -0.00893 0.0774 0.484 DC L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.35e-01 0.0277 0.0818 0.484 DC L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 8.23e-01 0.0182 0.0812 0.484 DC L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.95e-01 0.021 0.0805 0.47 Mono L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 6.46e-02 -0.0859 0.0463 0.47 Mono L1
ENSG00000116761 CTH -503939 sc-eQTL 8.32e-01 0.0136 0.0639 0.47 Mono L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.26e-01 0.115 0.0752 0.47 Mono L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.43e-01 0.0226 0.069 0.47 NK L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 2.51e-02 -0.136 0.0602 0.47 NK L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 9.16e-01 0.00648 0.0612 0.47 NK L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.55e-02 0.185 0.0758 0.47 NK L1
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.04e-01 0.0202 0.0814 0.47 Other_T L1
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.51e-02 -0.128 0.0634 0.47 Other_T L1
ENSG00000116761 CTH -503939 sc-eQTL 3.61e-02 -0.152 0.072 0.47 Other_T L1
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.98e-01 -0.0198 0.0771 0.47 Other_T L1
ENSG00000197568 HHLA3 -447526 sc-eQTL 9.20e-01 -0.00817 0.0816 0.47 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -298300 sc-eQTL 3.87e-01 0.0784 0.0904 0.487 B_Activated L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.85e-02 0.225 0.0944 0.487 B_Activated L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.31e-01 0.0332 0.0966 0.487 B_Activated L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 7.17e-01 0.0294 0.081 0.487 B_Activated L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.03e-01 -0.0211 0.0848 0.47 B_Intermediate L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.95e-02 -0.168 0.0713 0.47 B_Intermediate L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.89e-01 0.108 0.0819 0.47 B_Intermediate L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.67e-01 0.0956 0.0859 0.47 B_Intermediate L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.56e-01 -0.0276 0.0889 0.468 B_Memory L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.64e-01 -0.0578 0.0786 0.468 B_Memory L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 3.77e-01 0.0645 0.0729 0.468 B_Memory L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 9.84e-01 0.00169 0.0836 0.468 B_Memory L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 4.98e-01 0.0553 0.0815 0.47 B_Naive1 L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 6.04e-01 -0.0337 0.0648 0.47 B_Naive1 L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 9.78e-01 0.00194 0.0691 0.47 B_Naive1 L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 4.60e-01 0.0585 0.079 0.47 B_Naive1 L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.56e-01 -0.0157 0.0863 0.468 B_Naive2 L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.48e-01 -0.11 0.0758 0.468 B_Naive2 L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.36e-01 0.133 0.0889 0.468 B_Naive2 L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 9.15e-01 -0.00875 0.0819 0.468 B_Naive2 L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.21e-01 0.0195 0.0862 0.475 CD4_CTL L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.06e-01 -0.0744 0.0893 0.475 CD4_CTL L2
ENSG00000116761 CTH -503939 sc-eQTL 7.60e-01 -0.023 0.0749 0.475 CD4_CTL L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 3.24e-01 -0.0815 0.0824 0.475 CD4_CTL L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 3.66e-01 -0.0756 0.0834 0.475 CD4_CTL L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 9.64e-01 0.00306 0.0687 0.47 CD4_Naive L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 2.17e-02 -0.114 0.0492 0.47 CD4_Naive L2
ENSG00000116761 CTH -503939 sc-eQTL 8.99e-01 -0.00672 0.0528 0.47 CD4_Naive L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.68e-01 0.0724 0.0523 0.47 CD4_Naive L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.18e-01 0.103 0.0654 0.47 CD4_Naive L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 5.06e-03 -0.227 0.08 0.47 CD4_TCM L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.29e-02 -0.121 0.0595 0.47 CD4_TCM L2
ENSG00000116761 CTH -503939 sc-eQTL 3.74e-02 0.137 0.0653 0.47 CD4_TCM L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 5.14e-01 0.0408 0.0624 0.47 CD4_TCM L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.97e-01 0.105 0.0815 0.47 CD4_TCM L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.75e-01 0.0236 0.0826 0.47 CD4_TEM L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.39e-01 -0.107 0.0717 0.47 CD4_TEM L2
ENSG00000116761 CTH -503939 sc-eQTL 5.59e-01 -0.043 0.0734 0.47 CD4_TEM L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 3.62e-01 -0.0665 0.0727 0.47 CD4_TEM L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 8.49e-02 0.142 0.0822 0.47 CD4_TEM L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 3.52e-01 -0.0711 0.0762 0.47 CD8_CTL L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.36e-02 -0.145 0.0717 0.47 CD8_CTL L2
ENSG00000116761 CTH -503939 sc-eQTL 1.68e-02 0.167 0.0695 0.47 CD8_CTL L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 5.67e-03 0.227 0.0811 0.47 CD8_CTL L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.74e-02 0.195 0.0812 0.47 CD8_CTL L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 1.86e-01 0.112 0.0842 0.47 CD8_Naive L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 3.90e-02 -0.129 0.0623 0.47 CD8_Naive L2
ENSG00000116761 CTH -503939 sc-eQTL 6.72e-01 0.0278 0.0657 0.47 CD8_Naive L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 2.79e-01 0.0666 0.0614 0.47 CD8_Naive L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.60e-01 0.0989 0.0701 0.47 CD8_Naive L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 9.23e-01 -0.00861 0.0888 0.47 CD8_TCM L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 8.78e-01 -0.0126 0.0818 0.47 CD8_TCM L2
ENSG00000116761 CTH -503939 sc-eQTL 4.64e-01 0.0598 0.0815 0.47 CD8_TCM L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 6.86e-01 0.0345 0.0853 0.47 CD8_TCM L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 7.63e-02 0.153 0.086 0.47 CD8_TCM L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 1.21e-01 0.131 0.0841 0.475 CD8_TEM L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 7.75e-01 0.0226 0.0789 0.475 CD8_TEM L2
ENSG00000116761 CTH -503939 sc-eQTL 7.27e-01 -0.0266 0.076 0.475 CD8_TEM L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 9.04e-01 0.0106 0.0876 0.475 CD8_TEM L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 3.95e-01 0.0709 0.0832 0.475 CD8_TEM L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 9.76e-01 0.00254 0.0846 0.47 MAIT L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 7.54e-03 -0.22 0.0815 0.47 MAIT L2
ENSG00000116761 CTH -503939 sc-eQTL 1.49e-01 -0.101 0.0698 0.47 MAIT L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 2.64e-01 -0.0868 0.0775 0.47 MAIT L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 6.00e-01 -0.0397 0.0754 0.47 MAIT L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 5.84e-01 -0.0489 0.0892 0.467 NK_CD56bright L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 6.67e-01 -0.0339 0.0787 0.467 NK_CD56bright L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.35e-01 0.03 0.0885 0.467 NK_CD56bright L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.19e-01 0.105 0.0848 0.467 NK_CD56bright L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 5.52e-01 0.0438 0.0734 0.47 NK_CD56dim L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 8.60e-02 -0.122 0.0709 0.47 NK_CD56dim L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.18e-01 -0.0259 0.0716 0.47 NK_CD56dim L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.77e-01 0.0919 0.0842 0.47 NK_CD56dim L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.28e-01 -0.0302 0.0868 0.466 NK_HLA L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.72e-02 -0.155 0.0776 0.466 NK_HLA L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.95e-02 0.155 0.0882 0.466 NK_HLA L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 7.93e-02 0.152 0.0864 0.466 NK_HLA L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 5.71e-01 -0.0478 0.0842 0.47 NK_cytokine L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 5.46e-02 -0.138 0.0713 0.47 NK_cytokine L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.93e-01 -0.0212 0.0807 0.47 NK_cytokine L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.31e-01 0.118 0.078 0.47 NK_cytokine L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 5.34e-01 0.0661 0.106 0.441 PB L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 9.28e-01 0.00869 0.0955 0.441 PB L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 3.11e-01 -0.109 0.107 0.441 PB L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 5.37e-01 0.063 0.102 0.441 PB L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.29e-01 -0.0288 0.0831 0.472 Pro_T L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.17e-01 -0.0582 0.0716 0.472 Pro_T L2
ENSG00000116761 CTH -503939 sc-eQTL 4.87e-01 -0.0455 0.0653 0.472 Pro_T L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 8.95e-01 -0.0111 0.0839 0.472 Pro_T L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.82e-01 0.0895 0.0829 0.472 Pro_T L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 2.23e-01 0.106 0.0866 0.47 Treg L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.82e-02 -0.143 0.072 0.47 Treg L2
ENSG00000116761 CTH -503939 sc-eQTL 7.65e-01 -0.0174 0.058 0.47 Treg L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.11e-01 -0.0283 0.0762 0.47 Treg L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.49e-02 0.204 0.0831 0.47 Treg L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 2.63e-01 0.0981 0.0873 0.485 cDC L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 8.10e-01 -0.0158 0.0655 0.485 cDC L2
ENSG00000116761 CTH -503939 sc-eQTL 8.27e-01 -0.0174 0.0794 0.485 cDC L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 8.81e-01 0.014 0.093 0.485 cDC L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 4.27e-01 0.0675 0.0848 0.485 cDC L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.11e-01 0.0305 0.0824 0.47 cMono_IL1B L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.17e-01 -0.0443 0.0545 0.47 cMono_IL1B L2
ENSG00000116761 CTH -503939 sc-eQTL 8.27e-01 0.0148 0.0678 0.47 cMono_IL1B L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 7.85e-01 0.022 0.0803 0.47 cMono_IL1B L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.31e-01 -0.0303 0.0882 0.47 cMono_S100A L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 3.49e-01 -0.059 0.0629 0.47 cMono_S100A L2
ENSG00000116761 CTH -503939 sc-eQTL 3.69e-01 -0.0689 0.0765 0.47 cMono_S100A L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 2.40e-01 0.106 0.0897 0.47 cMono_S100A L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 4.13e-01 0.0875 0.106 0.464 gdT L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 7.98e-01 0.0261 0.102 0.464 gdT L2
ENSG00000116761 CTH -503939 sc-eQTL 4.26e-01 0.078 0.0977 0.464 gdT L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 4.12e-01 0.0868 0.105 0.464 gdT L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 9.79e-01 -0.00264 0.099 0.464 gdT L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 6.35e-02 0.159 0.0853 0.476 intMono L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 3.05e-01 -0.0771 0.075 0.476 intMono L2
ENSG00000116761 CTH -503939 sc-eQTL 2.99e-01 -0.0698 0.067 0.476 intMono L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 8.78e-01 -0.0134 0.0875 0.476 intMono L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 9.14e-01 -0.00928 0.0857 0.473 ncMono L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.98e-02 -0.129 0.0654 0.473 ncMono L2
ENSG00000116761 CTH -503939 sc-eQTL 5.82e-01 0.0364 0.066 0.473 ncMono L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 3.10e-03 0.218 0.0728 0.473 ncMono L2
ENSG00000066557 LRRC40 -298300 sc-eQTL 4.09e-01 0.079 0.0955 0.469 pDC L2
ENSG00000116754 SRSF11 -298403 sc-eQTL 5.79e-01 -0.045 0.0809 0.469 pDC L2
ENSG00000116761 CTH -503939 sc-eQTL 2.93e-01 0.0775 0.0735 0.469 pDC L2
ENSG00000118454 ANKRD13C -447455 sc-eQTL 6.08e-01 0.0499 0.0972 0.469 pDC L2
ENSG00000197568 HHLA3 -447526 sc-eQTL 4.45e-01 0.0654 0.0854 0.469 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -298300 sc-eQTL 7.15e-01 -0.0297 0.0812 0.47 B_Memory LOneK1K
ENSG00000116754 SRSF11 -298403 sc-eQTL 6.80e-02 -0.13 0.0707 0.47 B_Memory LOneK1K
ENSG00000118454 ANKRD13C -447455 sc-eQTL 1.05e-01 0.124 0.0762 0.47 B_Memory LOneK1K
ENSG00000197568 HHLA3 -447526 sc-eQTL 2.33e-01 0.1 0.0837 0.47 B_Memory LOneK1K
ENSG00000066557 LRRC40 -298300 sc-eQTL 9.82e-01 0.00182 0.0789 0.47 B_Naive LOneK1K
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.75e-01 -0.0907 0.0667 0.47 B_Naive LOneK1K
ENSG00000118454 ANKRD13C -447455 sc-eQTL 5.61e-01 0.0393 0.0676 0.47 B_Naive LOneK1K
ENSG00000197568 HHLA3 -447526 sc-eQTL 7.86e-01 0.0207 0.076 0.47 B_Naive LOneK1K
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.67e-01 -0.0138 0.0823 0.47 CD14_Mono LOneK1K
ENSG00000116754 SRSF11 -298403 sc-eQTL 2.94e-01 -0.0518 0.0493 0.47 CD14_Mono LOneK1K
ENSG00000116761 CTH -503939 sc-eQTL 9.94e-01 0.000505 0.065 0.47 CD14_Mono LOneK1K
ENSG00000118454 ANKRD13C -447455 sc-eQTL 5.17e-01 0.0537 0.0826 0.47 CD14_Mono LOneK1K
ENSG00000066557 LRRC40 -298300 sc-eQTL 1.97e-01 0.106 0.0822 0.472 CD16_Mono LOneK1K
ENSG00000116754 SRSF11 -298403 sc-eQTL 4.05e-02 -0.13 0.0632 0.472 CD16_Mono LOneK1K
ENSG00000116761 CTH -503939 sc-eQTL 7.94e-01 0.0163 0.0624 0.472 CD16_Mono LOneK1K
ENSG00000118454 ANKRD13C -447455 sc-eQTL 4.83e-02 0.152 0.0765 0.472 CD16_Mono LOneK1K
ENSG00000066557 LRRC40 -298300 sc-eQTL 8.80e-01 0.0109 0.0723 0.47 NK_CD56dim LOneK1K
ENSG00000116754 SRSF11 -298403 sc-eQTL 1.48e-02 -0.152 0.062 0.47 NK_CD56dim LOneK1K
ENSG00000118454 ANKRD13C -447455 sc-eQTL 8.71e-01 -0.0104 0.0638 0.47 NK_CD56dim LOneK1K
ENSG00000197568 HHLA3 -447526 sc-eQTL 1.82e-02 0.183 0.0768 0.47 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066557 LRRC40 -298300 eQTL 0.00674 0.0396 0.0146 0.0 0.0 0.438
ENSG00000116761 CTH -503939 eQTL 5.78e-08 0.16 0.0292 0.00636 0.00412 0.438
ENSG00000197568 HHLA3 -447526 eQTL 0.000637 0.0836 0.0244 0.0 0.0 0.438

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116754 \N -298403 1.3e-06 9.59e-07 3.58e-07 1e-06 3.37e-07 5.4e-07 1.55e-06 3.75e-07 1.49e-06 4.78e-07 1.89e-06 7.32e-07 2.33e-06 3.07e-07 5.35e-07 9.33e-07 8.25e-07 7.21e-07 7.73e-07 6.33e-07 6.17e-07 1.6e-06 8.66e-07 5.74e-07 2.23e-06 4.79e-07 9.02e-07 7.03e-07 1.31e-06 1.25e-06 7.05e-07 1.54e-07 2e-07 6.95e-07 6.22e-07 4.53e-07 5.12e-07 1.69e-07 3.73e-07 3.24e-07 2.84e-07 1.64e-06 5.07e-08 5.67e-08 2.5e-07 1.26e-07 2.3e-07 7.69e-08 1.04e-07
ENSG00000116761 CTH -503939 9.14e-07 5.18e-07 1.03e-07 3.62e-07 1.13e-07 1.85e-07 5.49e-07 1.21e-07 4.43e-07 2.34e-07 7.67e-07 3.65e-07 8.16e-07 1.1e-07 1.78e-07 2.23e-07 2.34e-07 3.74e-07 1.77e-07 1.28e-07 1.86e-07 3.71e-07 3.3e-07 1.44e-07 7.94e-07 2.34e-07 2.52e-07 2.44e-07 3.56e-07 5.17e-07 3.1e-07 7.91e-08 5.73e-08 1.38e-07 3.04e-07 7.92e-08 1e-07 6.67e-08 4.11e-08 5.61e-08 7.48e-08 5.09e-07 1.67e-08 1.75e-08 1.17e-07 1.78e-08 8.75e-08 2.8e-09 5.49e-08