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Genes within 1Mb (chr1:69649241:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.39e-01 0.117 0.0786 0.47 B L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 1.53e-01 -0.0874 0.061 0.47 B L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.64e-01 0.0412 0.0714 0.47 B L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 9.06e-01 -0.00926 0.0788 0.47 B L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 3.15e-01 0.0671 0.0666 0.47 CD4T L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 3.24e-01 0.0518 0.0524 0.47 CD4T L1
ENSG00000116761 CTH -761977 sc-eQTL 2.82e-01 0.0572 0.0531 0.47 CD4T L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 4.29e-01 0.0385 0.0486 0.47 CD4T L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 8.70e-01 -0.0111 0.0676 0.47 CD4T L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 3.00e-01 0.0793 0.0764 0.47 CD8T L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 8.38e-01 0.013 0.0638 0.47 CD8T L1
ENSG00000116761 CTH -761977 sc-eQTL 9.87e-01 0.00105 0.0624 0.47 CD8T L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 2.98e-01 0.0627 0.0601 0.47 CD8T L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.34e-01 0.0559 0.0714 0.47 CD8T L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 3.45e-01 0.0915 0.0967 0.475 DC L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 7.54e-01 0.0203 0.0647 0.475 DC L1
ENSG00000116761 CTH -761977 sc-eQTL 6.03e-01 -0.0434 0.0834 0.475 DC L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 3.32e-01 0.0856 0.0881 0.475 DC L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.86e-01 -0.061 0.0875 0.475 DC L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.41e-01 0.0176 0.0878 0.47 Mono L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.08e-01 -0.0337 0.0508 0.47 Mono L1
ENSG00000116761 CTH -761977 sc-eQTL 7.30e-01 -0.0241 0.0697 0.47 Mono L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.72e-01 0.035 0.0825 0.47 Mono L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 6.31e-01 -0.0363 0.0754 0.468 NK L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 3.43e-01 -0.0631 0.0665 0.468 NK L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.13e-01 0.0339 0.0669 0.468 NK L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 2.80e-01 -0.0908 0.0838 0.468 NK L1
ENSG00000066557 LRRC40 -556338 sc-eQTL 9.63e-01 0.004 0.0871 0.47 Other_T L1
ENSG00000116754 SRSF11 -556441 sc-eQTL 6.83e-01 -0.028 0.0684 0.47 Other_T L1
ENSG00000116761 CTH -761977 sc-eQTL 6.30e-01 0.0376 0.0778 0.47 Other_T L1
ENSG00000118454 ANKRD13C -705493 sc-eQTL 4.18e-01 0.0669 0.0824 0.47 Other_T L1
ENSG00000197568 HHLA3 -705564 sc-eQTL 7.79e-01 -0.0246 0.0873 0.47 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -556338 sc-eQTL 9.09e-02 0.17 0.0998 0.454 B_Activated L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 9.71e-01 -0.00385 0.107 0.454 B_Activated L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.60e-01 0.0328 0.107 0.454 B_Activated L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 3.16e-01 -0.0902 0.0897 0.454 B_Activated L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 6.79e-01 0.0382 0.0921 0.468 B_Intermediate L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.15e-01 -0.0511 0.0784 0.468 B_Intermediate L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.42e-01 0.0545 0.0892 0.468 B_Intermediate L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 2.19e-01 -0.115 0.0933 0.468 B_Intermediate L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.27e-01 -0.0215 0.0982 0.47 B_Memory L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.34e-02 -0.167 0.0862 0.47 B_Memory L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.44e-01 0.0264 0.0806 0.47 B_Memory L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.76e-01 -0.0659 0.0923 0.47 B_Memory L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.40e-01 0.0687 0.0888 0.47 B_Naive1 L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 7.87e-01 -0.0191 0.0706 0.47 B_Naive1 L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.33e-01 -0.047 0.0752 0.47 B_Naive1 L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 1.18e-01 0.134 0.0857 0.47 B_Naive1 L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.99e-01 0.121 0.0937 0.468 B_Naive2 L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 1.51e-01 -0.119 0.0826 0.468 B_Naive2 L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 1.43e-01 0.142 0.0968 0.468 B_Naive2 L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 6.08e-01 -0.0458 0.0892 0.468 B_Naive2 L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.96e-01 0.121 0.093 0.468 CD4_CTL L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.36e-01 -0.0601 0.0969 0.468 CD4_CTL L2
ENSG00000116761 CTH -761977 sc-eQTL 3.95e-01 0.0691 0.0811 0.468 CD4_CTL L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.18e-01 -0.0447 0.0895 0.468 CD4_CTL L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.11e-01 -0.0745 0.0905 0.468 CD4_CTL L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.53e-01 0.107 0.0749 0.47 CD4_Naive L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.99e-01 0.0369 0.0545 0.47 CD4_Naive L2
ENSG00000116761 CTH -761977 sc-eQTL 8.18e-02 0.1 0.0574 0.47 CD4_Naive L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 9.71e-01 0.0021 0.0576 0.47 CD4_Naive L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 6.09e-01 -0.0369 0.072 0.47 CD4_Naive L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.63e-02 -0.213 0.0881 0.47 CD4_TCM L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 1.54e-01 0.0939 0.0656 0.47 CD4_TCM L2
ENSG00000116761 CTH -761977 sc-eQTL 9.49e-01 0.00466 0.0723 0.47 CD4_TCM L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.80e-01 0.0379 0.0685 0.47 CD4_TCM L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 1.96e-01 -0.116 0.0894 0.47 CD4_TCM L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 6.49e-01 -0.0408 0.0895 0.47 CD4_TEM L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.26e-01 0.0496 0.078 0.47 CD4_TEM L2
ENSG00000116761 CTH -761977 sc-eQTL 7.32e-02 -0.142 0.079 0.47 CD4_TEM L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.59e-01 -0.0349 0.0789 0.47 CD4_TEM L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.09e-01 0.0741 0.0896 0.47 CD4_TEM L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 5.31e-01 0.0521 0.083 0.47 CD8_CTL L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 9.63e-02 -0.131 0.0781 0.47 CD8_CTL L2
ENSG00000116761 CTH -761977 sc-eQTL 6.60e-01 -0.0337 0.0765 0.47 CD8_CTL L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.14e-02 0.167 0.089 0.47 CD8_CTL L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 2.02e-01 0.114 0.0891 0.47 CD8_CTL L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 6.29e-01 0.0453 0.0935 0.47 CD8_Naive L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 9.71e-01 0.00254 0.0696 0.47 CD8_Naive L2
ENSG00000116761 CTH -761977 sc-eQTL 2.46e-01 -0.0845 0.0725 0.47 CD8_Naive L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.50e-01 0.0217 0.0681 0.47 CD8_Naive L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 9.99e-01 0.000128 0.0779 0.47 CD8_Naive L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 5.62e-01 -0.0584 0.101 0.463 CD8_TCM L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.72e-01 -0.0666 0.0926 0.463 CD8_TCM L2
ENSG00000116761 CTH -761977 sc-eQTL 6.48e-01 -0.0422 0.0925 0.463 CD8_TCM L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 9.48e-01 0.00628 0.0967 0.463 CD8_TCM L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 5.33e-03 0.271 0.0963 0.463 CD8_TCM L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 9.40e-01 -0.00707 0.0939 0.463 CD8_TEM L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 6.96e-01 -0.0342 0.0876 0.463 CD8_TEM L2
ENSG00000116761 CTH -761977 sc-eQTL 2.52e-01 0.0966 0.0841 0.463 CD8_TEM L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.73e-01 -0.0281 0.0972 0.463 CD8_TEM L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 5.03e-01 -0.062 0.0924 0.463 CD8_TEM L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 7.71e-01 -0.0272 0.0933 0.468 MAIT L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.64e-01 0.067 0.0914 0.468 MAIT L2
ENSG00000116761 CTH -761977 sc-eQTL 9.75e-01 0.00242 0.0774 0.468 MAIT L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 8.97e-01 0.0111 0.0858 0.468 MAIT L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 7.09e-01 -0.0311 0.0832 0.468 MAIT L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 7.62e-02 0.174 0.0976 0.46 NK_CD56bright L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.96e-01 0.046 0.0866 0.46 NK_CD56bright L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.12e-01 -0.036 0.0975 0.46 NK_CD56bright L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.95e-01 -0.064 0.0937 0.46 NK_CD56bright L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 7.27e-02 -0.142 0.0789 0.466 NK_CD56dim L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 6.45e-01 -0.0356 0.0772 0.466 NK_CD56dim L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 6.39e-01 -0.0364 0.0774 0.466 NK_CD56dim L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 8.02e-01 0.023 0.0914 0.466 NK_CD56dim L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.18e-01 -0.0768 0.0947 0.452 NK_HLA L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.70e-01 -0.0619 0.0855 0.452 NK_HLA L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.95e-01 0.0517 0.097 0.452 NK_HLA L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 2.52e-01 -0.109 0.0948 0.452 NK_HLA L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.76e-01 0.0143 0.0915 0.466 NK_cytokine L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.55e-01 -0.0584 0.0781 0.466 NK_cytokine L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 5.54e-01 -0.052 0.0876 0.466 NK_cytokine L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 3.40e-01 -0.0813 0.085 0.466 NK_cytokine L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 5.18e-01 0.0729 0.112 0.507 PB L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.98e-02 -0.198 0.0996 0.507 PB L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 3.86e-01 -0.0992 0.114 0.507 PB L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.86e-01 -0.0755 0.108 0.507 PB L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 6.89e-01 0.0366 0.0911 0.47 Pro_T L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.78e-01 0.0439 0.0787 0.47 Pro_T L2
ENSG00000116761 CTH -761977 sc-eQTL 4.46e-01 0.0547 0.0717 0.47 Pro_T L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.90e-01 -0.0245 0.092 0.47 Pro_T L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 7.88e-01 0.0246 0.0912 0.47 Pro_T L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 2.52e-01 0.109 0.0946 0.47 Treg L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 6.09e-01 0.0406 0.0793 0.47 Treg L2
ENSG00000116761 CTH -761977 sc-eQTL 3.70e-01 -0.0568 0.0633 0.47 Treg L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 9.87e-01 -0.00131 0.0833 0.47 Treg L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 1.45e-02 0.224 0.0907 0.47 Treg L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.01e-01 0.0792 0.094 0.466 cDC L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 5.97e-01 -0.0373 0.0704 0.466 cDC L2
ENSG00000116761 CTH -761977 sc-eQTL 3.54e-01 -0.0792 0.0852 0.466 cDC L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 9.03e-01 -0.0122 0.1 0.466 cDC L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 5.70e-01 -0.052 0.0912 0.466 cDC L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.14e-01 0.141 0.0888 0.47 cMono_IL1B L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 6.63e-01 -0.0258 0.0591 0.47 cMono_IL1B L2
ENSG00000116761 CTH -761977 sc-eQTL 9.77e-01 0.00211 0.0735 0.47 cMono_IL1B L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.98e-01 0.0222 0.087 0.47 cMono_IL1B L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 1.72e-01 -0.129 0.0942 0.47 cMono_S100A L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 7.80e-01 -0.0189 0.0676 0.47 cMono_S100A L2
ENSG00000116761 CTH -761977 sc-eQTL 8.77e-02 -0.14 0.0816 0.47 cMono_S100A L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 1.08e-01 0.155 0.0959 0.47 cMono_S100A L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 5.88e-01 -0.0621 0.114 0.452 gdT L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 8.95e-02 -0.185 0.108 0.452 gdT L2
ENSG00000116761 CTH -761977 sc-eQTL 9.50e-01 0.0066 0.105 0.452 gdT L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 1.01e-01 0.186 0.112 0.452 gdT L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 1.14e-01 -0.168 0.105 0.452 gdT L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.01e-01 0.0235 0.0931 0.471 intMono L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 9.50e-01 -0.00512 0.0813 0.471 intMono L2
ENSG00000116761 CTH -761977 sc-eQTL 2.51e-01 0.0835 0.0725 0.471 intMono L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 9.73e-01 -0.00322 0.0946 0.471 intMono L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.00e-01 -0.0812 0.0962 0.471 ncMono L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 8.96e-01 -0.00977 0.0743 0.471 ncMono L2
ENSG00000116761 CTH -761977 sc-eQTL 9.41e-01 -0.00548 0.0743 0.471 ncMono L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 3.66e-01 -0.0758 0.0835 0.471 ncMono L2
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.39e-01 0.0227 0.112 0.432 pDC L2
ENSG00000116754 SRSF11 -556441 sc-eQTL 8.68e-01 0.0157 0.0945 0.432 pDC L2
ENSG00000116761 CTH -761977 sc-eQTL 9.88e-01 0.00135 0.086 0.432 pDC L2
ENSG00000118454 ANKRD13C -705493 sc-eQTL 2.62e-01 0.127 0.113 0.432 pDC L2
ENSG00000197568 HHLA3 -705564 sc-eQTL 6.32e-01 -0.0479 0.0998 0.432 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.44e-01 0.0676 0.0882 0.47 B_Memory LOneK1K
ENSG00000116754 SRSF11 -556441 sc-eQTL 3.07e-01 -0.0791 0.0773 0.47 B_Memory LOneK1K
ENSG00000118454 ANKRD13C -705493 sc-eQTL 3.22e-01 0.0825 0.0832 0.47 B_Memory LOneK1K
ENSG00000197568 HHLA3 -705564 sc-eQTL 8.97e-02 -0.155 0.0907 0.47 B_Memory LOneK1K
ENSG00000066557 LRRC40 -556338 sc-eQTL 2.23e-01 0.105 0.0861 0.47 B_Naive LOneK1K
ENSG00000116754 SRSF11 -556441 sc-eQTL 4.73e-01 -0.0526 0.0732 0.47 B_Naive LOneK1K
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.57e-01 0.023 0.0741 0.47 B_Naive LOneK1K
ENSG00000197568 HHLA3 -705564 sc-eQTL 3.41e-01 0.0792 0.083 0.47 B_Naive LOneK1K
ENSG00000066557 LRRC40 -556338 sc-eQTL 8.01e-01 0.0225 0.0889 0.47 CD14_Mono LOneK1K
ENSG00000116754 SRSF11 -556441 sc-eQTL 7.58e-01 -0.0164 0.0533 0.47 CD14_Mono LOneK1K
ENSG00000116761 CTH -761977 sc-eQTL 7.28e-01 -0.0244 0.0701 0.47 CD14_Mono LOneK1K
ENSG00000118454 ANKRD13C -705493 sc-eQTL 2.62e-01 0.1 0.089 0.47 CD14_Mono LOneK1K
ENSG00000066557 LRRC40 -556338 sc-eQTL 4.82e-01 -0.0636 0.0902 0.468 CD16_Mono LOneK1K
ENSG00000116754 SRSF11 -556441 sc-eQTL 8.36e-01 -0.0145 0.0699 0.468 CD16_Mono LOneK1K
ENSG00000116761 CTH -761977 sc-eQTL 5.80e-01 0.0378 0.0683 0.468 CD16_Mono LOneK1K
ENSG00000118454 ANKRD13C -705493 sc-eQTL 2.89e-01 -0.0896 0.0844 0.468 CD16_Mono LOneK1K
ENSG00000066557 LRRC40 -556338 sc-eQTL 2.43e-01 -0.0919 0.0786 0.466 NK_CD56dim LOneK1K
ENSG00000116754 SRSF11 -556441 sc-eQTL 3.52e-01 -0.0639 0.0685 0.466 NK_CD56dim LOneK1K
ENSG00000118454 ANKRD13C -705493 sc-eQTL 7.28e-01 0.0242 0.0696 0.466 NK_CD56dim LOneK1K
ENSG00000197568 HHLA3 -705564 sc-eQTL 4.45e-01 -0.0649 0.0848 0.466 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000033122 LRRC7 80980 eQTL 9.83e-13 -0.281 0.0388 0.0 0.0 0.47

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000033122 LRRC7 80980 5.46e-06 5.1e-06 5.86e-07 3.38e-06 1.67e-06 1.52e-06 7.3e-06 1.18e-06 5.06e-06 2.97e-06 6.38e-06 3.29e-06 8.21e-06 1.78e-06 1.02e-06 3.98e-06 2e-06 3.95e-06 1.51e-06 1.44e-06 2.77e-06 5.09e-06 4.82e-06 1.88e-06 8.24e-06 2.16e-06 2.34e-06 1.44e-06 5.34e-06 6.2e-06 2.74e-06 4.18e-07 6.95e-07 2.24e-06 1.98e-06 1.16e-06 1.07e-06 4.36e-07 9.81e-07 6.18e-07 8.36e-07 7.2e-06 5.62e-07 1.56e-07 6.96e-07 1.21e-06 1.14e-06 7.35e-07 4.68e-07
ENSG00000197568 \N -705564 3.07e-07 1.5e-07 5.91e-08 2.09e-07 1.03e-07 8.45e-08 1.99e-07 5.62e-08 1.44e-07 7.6e-08 1.62e-07 1.2e-07 2.05e-07 7.95e-08 5.94e-08 7.98e-08 4.18e-08 1.72e-07 7.18e-08 4.95e-08 1.27e-07 1.42e-07 1.62e-07 3.07e-08 1.85e-07 1.31e-07 1.17e-07 1.04e-07 1.31e-07 1.06e-07 1.09e-07 3.59e-08 3.59e-08 9.52e-08 3.07e-08 3.07e-08 5.42e-08 9.03e-08 6.3e-08 3.99e-08 5.77e-08 1.52e-07 5.39e-08 1.88e-08 2.64e-08 1.71e-08 8.81e-08 1.9e-09 4.81e-08