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Genes within 1Mb (chr1:68687574:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116729 WLS 454454 sc-eQTL 5.93e-01 -0.042 0.0784 0.651 DC L1
ENSG00000116729 WLS 454454 sc-eQTL 3.62e-01 -0.0659 0.0722 0.643 Mono L1
ENSG00000024526 DEPDC1 190353 sc-eQTL 8.85e-01 -0.00604 0.0419 0.643 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024526 DEPDC1 190353 sc-eQTL 2.34e-01 -0.0386 0.0324 0.645 MAIT L2
ENSG00000024526 DEPDC1 190353 sc-eQTL 7.11e-01 -0.0205 0.0553 0.641 Pro_T L2
ENSG00000116729 WLS 454454 sc-eQTL 8.36e-01 -0.0172 0.0829 0.656 cDC L2
ENSG00000116729 WLS 454454 sc-eQTL 3.11e-01 -0.0763 0.0751 0.643 cMono_IL1B L2
ENSG00000116729 WLS 454454 sc-eQTL 6.27e-01 -0.0342 0.0702 0.643 cMono_S100A L2
ENSG00000116729 WLS 454454 sc-eQTL 5.60e-01 -0.0494 0.0845 0.64 intMono L2
ENSG00000116729 WLS 454454 sc-eQTL 5.31e-01 0.0498 0.0794 0.652 ncMono L2
ENSG00000116729 WLS 454454 sc-eQTL 8.99e-01 -0.00964 0.0758 0.653 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116729 WLS 454454 sc-eQTL 2.68e-01 -0.0755 0.068 0.643 CD14_Mono LOneK1K
ENSG00000116729 WLS 454454 sc-eQTL 5.50e-01 0.0499 0.0834 0.647 CD16_Mono LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116729 WLS 454454 eQTL 0.0139 0.0649 0.0263 0.0 0.0 0.332
ENSG00000234383 CTBP2P8 524484 eQTL 0.0249 0.0693 0.0308 0.0 0.0 0.332

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000033122 \N -880687 2.8e-07 1.27e-07 5.64e-08 1.82e-07 9.8e-08 9.91e-08 1.6e-07 5.43e-08 1.47e-07 6.08e-08 1.63e-07 1.05e-07 1.59e-07 7.13e-08 6.25e-08 7.74e-08 4.12e-08 1.44e-07 6.32e-08 4.78e-08 1.26e-07 1.25e-07 1.44e-07 2.79e-08 1.63e-07 1.26e-07 1.18e-07 9.92e-08 1.22e-07 9.49e-08 1.06e-07 3.1e-08 3.73e-08 8.56e-08 5.64e-08 3.28e-08 5.31e-08 8.63e-08 6.63e-08 3.82e-08 5.34e-08 1.46e-07 5.2e-08 1.13e-08 3.81e-08 1.87e-08 1.2e-07 1.88e-09 4.99e-08
ENSG00000116729 WLS 454454 8.85e-07 5.67e-07 1.22e-07 3.66e-07 1.09e-07 2.09e-07 5.49e-07 1.62e-07 5.06e-07 2.62e-07 7.44e-07 3.91e-07 7.71e-07 1.34e-07 2.81e-07 2.85e-07 3.63e-07 4.11e-07 2.6e-07 1.76e-07 2.3e-07 4.14e-07 3.77e-07 2.17e-07 7.94e-07 2.74e-07 3.26e-07 2.69e-07 4.22e-07 6.03e-07 3.13e-07 6.42e-08 5.63e-08 1.54e-07 3.4e-07 1.36e-07 1.08e-07 9.33e-08 6.63e-08 2.26e-08 1.01e-07 5.29e-07 4.12e-08 1.92e-08 1.71e-07 1.33e-08 1.17e-07 1.2e-08 6.17e-08