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Genes within 1Mb (chr1:68182033:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116717 GADD45A 496832 sc-eQTL 2.02e-01 0.0783 0.0612 0.218 B L1
ENSG00000142864 SERBP1 751618 sc-eQTL 2.47e-01 0.0759 0.0655 0.218 B L1
ENSG00000116717 GADD45A 496832 sc-eQTL 2.31e-01 0.0723 0.0601 0.218 CD4T L1
ENSG00000142864 SERBP1 751618 sc-eQTL 8.52e-01 0.0111 0.0596 0.218 CD4T L1
ENSG00000116717 GADD45A 496832 sc-eQTL 1.27e-01 0.0819 0.0535 0.218 CD8T L1
ENSG00000142864 SERBP1 751618 sc-eQTL 5.10e-01 -0.0371 0.0563 0.218 CD8T L1
ENSG00000116717 GADD45A 496832 sc-eQTL 5.70e-01 -0.0619 0.109 0.218 DC L1
ENSG00000116729 WLS -51087 sc-eQTL 7.38e-01 0.0325 0.0971 0.218 DC L1
ENSG00000142864 SERBP1 751618 sc-eQTL 3.75e-01 0.0784 0.0881 0.218 DC L1
ENSG00000116717 GADD45A 496832 sc-eQTL 8.27e-01 0.0149 0.0682 0.218 Mono L1
ENSG00000116729 WLS -51087 sc-eQTL 6.50e-02 0.166 0.0895 0.218 Mono L1
ENSG00000142864 SERBP1 751618 sc-eQTL 3.11e-01 0.0738 0.0726 0.218 Mono L1
ENSG00000081985 IL12RB2 874669 sc-eQTL 3.91e-01 -0.0596 0.0694 0.219 NK L1
ENSG00000116717 GADD45A 496832 sc-eQTL 6.41e-01 -0.0381 0.0815 0.219 NK L1
ENSG00000142864 SERBP1 751618 sc-eQTL 4.02e-01 -0.0621 0.074 0.219 NK L1
ENSG00000024526 DEPDC1 -315188 sc-eQTL 9.01e-01 -0.00644 0.0515 0.218 Other_T L1
ENSG00000081985 IL12RB2 874669 sc-eQTL 9.53e-01 -0.00576 0.0981 0.218 Other_T L1
ENSG00000116717 GADD45A 496832 sc-eQTL 2.88e-02 0.145 0.0657 0.218 Other_T L1
ENSG00000142864 SERBP1 751618 sc-eQTL 3.51e-01 -0.0706 0.0756 0.218 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116717 GADD45A 496832 sc-eQTL 2.94e-01 -0.117 0.111 0.219 B_Activated L2
ENSG00000142864 SERBP1 751618 sc-eQTL 2.18e-01 -0.157 0.127 0.219 B_Activated L2
ENSG00000116717 GADD45A 496832 sc-eQTL 4.73e-01 0.0684 0.0953 0.219 B_Intermediate L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.51e-01 -0.00637 0.105 0.219 B_Intermediate L2
ENSG00000116717 GADD45A 496832 sc-eQTL 5.41e-02 0.2 0.103 0.22 B_Memory L2
ENSG00000142864 SERBP1 751618 sc-eQTL 2.75e-01 0.114 0.104 0.22 B_Memory L2
ENSG00000116717 GADD45A 496832 sc-eQTL 3.53e-01 0.0677 0.0727 0.218 B_Naive1 L2
ENSG00000142864 SERBP1 751618 sc-eQTL 6.46e-01 -0.0416 0.0906 0.218 B_Naive1 L2
ENSG00000116717 GADD45A 496832 sc-eQTL 1.21e-01 0.166 0.107 0.219 B_Naive2 L2
ENSG00000142864 SERBP1 751618 sc-eQTL 1.42e-01 0.132 0.0897 0.219 B_Naive2 L2
ENSG00000116717 GADD45A 496832 sc-eQTL 9.24e-01 -0.00925 0.0963 0.22 CD4_CTL L2
ENSG00000142864 SERBP1 751618 sc-eQTL 3.02e-01 0.115 0.111 0.22 CD4_CTL L2
ENSG00000116717 GADD45A 496832 sc-eQTL 1.60e-01 0.0888 0.063 0.218 CD4_Naive L2
ENSG00000142864 SERBP1 751618 sc-eQTL 8.06e-01 0.0153 0.0621 0.218 CD4_Naive L2
ENSG00000116717 GADD45A 496832 sc-eQTL 1.79e-01 0.0817 0.0606 0.218 CD4_TCM L2
ENSG00000142864 SERBP1 751618 sc-eQTL 3.84e-01 0.0725 0.0831 0.218 CD4_TCM L2
ENSG00000116717 GADD45A 496832 sc-eQTL 9.64e-01 -0.00305 0.0668 0.218 CD4_TEM L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.44e-02 -0.172 0.103 0.218 CD4_TEM L2
ENSG00000116717 GADD45A 496832 sc-eQTL 1.86e-01 0.102 0.0768 0.218 CD8_CTL L2
ENSG00000142864 SERBP1 751618 sc-eQTL 6.78e-01 0.0436 0.105 0.218 CD8_CTL L2
ENSG00000116717 GADD45A 496832 sc-eQTL 8.91e-02 0.11 0.0646 0.218 CD8_Naive L2
ENSG00000142864 SERBP1 751618 sc-eQTL 6.92e-01 -0.0326 0.0824 0.218 CD8_Naive L2
ENSG00000116717 GADD45A 496832 sc-eQTL 2.83e-01 0.0802 0.0745 0.215 CD8_TCM L2
ENSG00000142864 SERBP1 751618 sc-eQTL 7.83e-01 0.0324 0.117 0.215 CD8_TCM L2
ENSG00000116717 GADD45A 496832 sc-eQTL 8.74e-01 -0.0143 0.0901 0.221 CD8_TEM L2
ENSG00000142864 SERBP1 751618 sc-eQTL 1.77e-01 -0.154 0.113 0.221 CD8_TEM L2
ENSG00000024526 DEPDC1 -315188 sc-eQTL 7.13e-01 -0.0147 0.0398 0.221 MAIT L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 4.02e-01 0.0918 0.109 0.221 MAIT L2
ENSG00000116717 GADD45A 496832 sc-eQTL 1.38e-01 0.122 0.0818 0.221 MAIT L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.74e-01 -0.00332 0.103 0.221 MAIT L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 7.59e-01 -0.0267 0.0871 0.224 NK_CD56bright L2
ENSG00000116717 GADD45A 496832 sc-eQTL 7.73e-02 0.178 0.1 0.224 NK_CD56bright L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.62e-01 0.00494 0.104 0.224 NK_CD56bright L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 5.19e-01 -0.0502 0.0779 0.22 NK_CD56dim L2
ENSG00000116717 GADD45A 496832 sc-eQTL 2.01e-01 -0.113 0.0884 0.22 NK_CD56dim L2
ENSG00000142864 SERBP1 751618 sc-eQTL 4.96e-01 -0.0576 0.0846 0.22 NK_CD56dim L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 9.81e-01 0.00178 0.0736 0.221 NK_HLA L2
ENSG00000116717 GADD45A 496832 sc-eQTL 6.64e-01 0.0469 0.108 0.221 NK_HLA L2
ENSG00000142864 SERBP1 751618 sc-eQTL 4.63e-01 0.0725 0.0986 0.221 NK_HLA L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 2.17e-01 -0.108 0.0874 0.22 NK_cytokine L2
ENSG00000116717 GADD45A 496832 sc-eQTL 6.55e-01 -0.0422 0.0943 0.22 NK_cytokine L2
ENSG00000142864 SERBP1 751618 sc-eQTL 4.75e-01 -0.0645 0.0901 0.22 NK_cytokine L2
ENSG00000116717 GADD45A 496832 sc-eQTL 2.26e-01 0.153 0.126 0.211 PB L2
ENSG00000142864 SERBP1 751618 sc-eQTL 8.82e-01 0.0138 0.0931 0.211 PB L2
ENSG00000024526 DEPDC1 -315188 sc-eQTL 8.46e-01 0.0133 0.068 0.217 Pro_T L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 6.52e-01 0.046 0.102 0.217 Pro_T L2
ENSG00000116717 GADD45A 496832 sc-eQTL 8.75e-01 0.0165 0.105 0.217 Pro_T L2
ENSG00000142864 SERBP1 751618 sc-eQTL 5.69e-01 -0.042 0.0737 0.217 Pro_T L2
ENSG00000116717 GADD45A 496832 sc-eQTL 9.29e-01 -0.00757 0.0843 0.218 Treg L2
ENSG00000142864 SERBP1 751618 sc-eQTL 7.94e-01 -0.0248 0.0948 0.218 Treg L2
ENSG00000116717 GADD45A 496832 sc-eQTL 6.58e-01 -0.0527 0.119 0.222 cDC L2
ENSG00000116729 WLS -51087 sc-eQTL 7.51e-01 -0.0324 0.102 0.222 cDC L2
ENSG00000142864 SERBP1 751618 sc-eQTL 3.77e-01 0.0841 0.0949 0.222 cDC L2
ENSG00000116717 GADD45A 496832 sc-eQTL 7.31e-01 -0.0251 0.0729 0.218 cMono_IL1B L2
ENSG00000116729 WLS -51087 sc-eQTL 7.06e-02 0.171 0.0941 0.218 cMono_IL1B L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.88e-01 -0.00127 0.0834 0.218 cMono_IL1B L2
ENSG00000116717 GADD45A 496832 sc-eQTL 7.45e-01 0.0305 0.0937 0.218 cMono_S100A L2
ENSG00000116729 WLS -51087 sc-eQTL 3.56e-02 0.184 0.0869 0.218 cMono_S100A L2
ENSG00000142864 SERBP1 751618 sc-eQTL 3.19e-01 0.0942 0.0942 0.218 cMono_S100A L2
ENSG00000081985 IL12RB2 874669 sc-eQTL 2.30e-01 -0.122 0.101 0.203 gdT L2
ENSG00000116717 GADD45A 496832 sc-eQTL 8.52e-02 0.216 0.125 0.203 gdT L2
ENSG00000142864 SERBP1 751618 sc-eQTL 4.04e-01 0.124 0.148 0.203 gdT L2
ENSG00000116717 GADD45A 496832 sc-eQTL 9.49e-01 -0.00627 0.0989 0.211 intMono L2
ENSG00000116729 WLS -51087 sc-eQTL 6.90e-02 -0.191 0.105 0.211 intMono L2
ENSG00000142864 SERBP1 751618 sc-eQTL 3.71e-01 0.0918 0.102 0.211 intMono L2
ENSG00000116717 GADD45A 496832 sc-eQTL 2.38e-01 0.129 0.109 0.222 ncMono L2
ENSG00000116729 WLS -51087 sc-eQTL 9.30e-01 0.00891 0.101 0.222 ncMono L2
ENSG00000142864 SERBP1 751618 sc-eQTL 9.30e-01 -0.0087 0.0983 0.222 ncMono L2
ENSG00000116717 GADD45A 496832 sc-eQTL 4.55e-01 -0.0849 0.113 0.237 pDC L2
ENSG00000116729 WLS -51087 sc-eQTL 8.62e-01 0.0166 0.095 0.237 pDC L2
ENSG00000142864 SERBP1 751618 sc-eQTL 4.92e-01 0.0747 0.109 0.237 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116717 GADD45A 496832 sc-eQTL 1.95e-01 0.116 0.0897 0.218 B_Memory LOneK1K
ENSG00000142864 SERBP1 751618 sc-eQTL 5.05e-01 0.0635 0.0952 0.218 B_Memory LOneK1K
ENSG00000116717 GADD45A 496832 sc-eQTL 1.78e-01 0.0964 0.0713 0.218 B_Naive LOneK1K
ENSG00000142864 SERBP1 751618 sc-eQTL 6.77e-01 0.0324 0.0777 0.218 B_Naive LOneK1K
ENSG00000116717 GADD45A 496832 sc-eQTL 6.81e-01 -0.0295 0.0718 0.218 CD14_Mono LOneK1K
ENSG00000116729 WLS -51087 sc-eQTL 6.00e-02 0.159 0.0843 0.218 CD14_Mono LOneK1K
ENSG00000142864 SERBP1 751618 sc-eQTL 4.82e-01 0.0529 0.0752 0.218 CD14_Mono LOneK1K
ENSG00000116717 GADD45A 496832 sc-eQTL 6.20e-01 0.0497 0.1 0.218 CD16_Mono LOneK1K
ENSG00000116729 WLS -51087 sc-eQTL 7.22e-01 -0.0373 0.105 0.218 CD16_Mono LOneK1K
ENSG00000142864 SERBP1 751618 sc-eQTL 2.31e-01 0.098 0.0816 0.218 CD16_Mono LOneK1K
ENSG00000081985 IL12RB2 874669 sc-eQTL 5.65e-01 -0.0431 0.0746 0.22 NK_CD56dim LOneK1K
ENSG00000116717 GADD45A 496832 sc-eQTL 6.54e-01 -0.0381 0.085 0.22 NK_CD56dim LOneK1K
ENSG00000142864 SERBP1 751618 sc-eQTL 5.08e-01 -0.0518 0.0781 0.22 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116729 WLS -51087 eQTL 0.00012 -0.107 0.0277 0.0 0.0 0.217
ENSG00000232284 GNG12-AS1 349730 eQTL 0.185 0.0495 0.0373 0.00141 0.0 0.217
ENSG00000234383 CTBP2P8 18943 eQTL 5.32e-05 -0.132 0.0325 0.0 0.0 0.217

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116729 WLS -51087 7.62e-06 9.91e-06 1.32e-06 4.4e-06 2.1e-06 3.93e-06 1.02e-05 1.46e-06 8.03e-06 4.47e-06 1.12e-05 4.99e-06 1.38e-05 3.84e-06 2.11e-06 5.65e-06 3.77e-06 5.56e-06 2.55e-06 2.62e-06 4.54e-06 8e-06 6.98e-06 2.98e-06 1.27e-05 2.8e-06 4.35e-06 3.3e-06 8.37e-06 8.58e-06 5.38e-06 5.57e-07 1.14e-06 2.77e-06 3.19e-06 2.22e-06 1.65e-06 1.57e-06 1.64e-06 1.03e-06 8.13e-07 1.16e-05 1.28e-06 1.68e-07 7.71e-07 1.21e-06 1.02e-06 6.61e-07 6.14e-07
ENSG00000234383 CTBP2P8 18943 1.41e-05 2.01e-05 3.01e-06 9.91e-06 2.75e-06 7.51e-06 2.32e-05 2.58e-06 1.67e-05 7.94e-06 2.13e-05 8.18e-06 3.22e-05 7.58e-06 4.91e-06 9.44e-06 8.87e-06 1.27e-05 5.37e-06 4.23e-06 7.96e-06 1.6e-05 1.64e-05 5.44e-06 2.78e-05 5.23e-06 7.76e-06 7.29e-06 1.78e-05 2.06e-05 1.24e-05 1.19e-06 1.73e-06 4.2e-06 6.94e-06 4.37e-06 2.24e-06 2.72e-06 3.24e-06 2.54e-06 1.3e-06 2.12e-05 2.46e-06 2.86e-07 1.76e-06 2.49e-06 2.08e-06 1.17e-06 8.3e-07