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Genes within 1Mb (chr1:67938900:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 884752 sc-eQTL 9.27e-02 0.125 0.0742 0.35 B L1
ENSG00000116717 GADD45A 253699 sc-eQTL 3.29e-01 0.0515 0.0527 0.35 B L1
ENSG00000142864 SERBP1 508485 sc-eQTL 4.95e-01 -0.0386 0.0564 0.35 B L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 5.44e-01 -0.0383 0.0629 0.35 CD4T L1
ENSG00000116717 GADD45A 253699 sc-eQTL 9.58e-01 -0.00276 0.0527 0.35 CD4T L1
ENSG00000142864 SERBP1 508485 sc-eQTL 5.61e-01 -0.0303 0.052 0.35 CD4T L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 9.88e-01 -0.000972 0.0672 0.35 CD8T L1
ENSG00000116717 GADD45A 253699 sc-eQTL 8.08e-01 -0.0114 0.047 0.35 CD8T L1
ENSG00000142864 SERBP1 508485 sc-eQTL 9.92e-02 -0.0812 0.049 0.35 CD8T L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 8.25e-01 0.0209 0.0943 0.349 DC L1
ENSG00000116717 GADD45A 253699 sc-eQTL 9.24e-01 -0.00885 0.0922 0.349 DC L1
ENSG00000116729 WLS -294220 sc-eQTL 8.75e-02 0.14 0.0816 0.349 DC L1
ENSG00000142864 SERBP1 508485 sc-eQTL 6.01e-01 0.0392 0.0747 0.349 DC L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.66e-01 0.0699 0.0957 0.35 Mono L1
ENSG00000116717 GADD45A 253699 sc-eQTL 6.92e-02 -0.106 0.058 0.35 Mono L1
ENSG00000116729 WLS -294220 sc-eQTL 9.02e-01 -0.00957 0.0774 0.35 Mono L1
ENSG00000142864 SERBP1 508485 sc-eQTL 7.37e-01 -0.021 0.0625 0.35 Mono L1
ENSG00000081985 IL12RB2 631536 sc-eQTL 3.21e-01 -0.0606 0.061 0.348 NK L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.75e-01 0.0473 0.066 0.348 NK L1
ENSG00000116717 GADD45A 253699 sc-eQTL 8.81e-01 -0.0108 0.0717 0.348 NK L1
ENSG00000142864 SERBP1 508485 sc-eQTL 1.34e-01 -0.0975 0.0648 0.348 NK L1
ENSG00000024526 DEPDC1 -558321 sc-eQTL 7.90e-01 0.0117 0.044 0.35 Other_T L1
ENSG00000081985 IL12RB2 631536 sc-eQTL 7.94e-01 -0.0219 0.0837 0.35 Other_T L1
ENSG00000116704 SLC35D1 884752 sc-eQTL 7.15e-01 -0.0278 0.0761 0.35 Other_T L1
ENSG00000116717 GADD45A 253699 sc-eQTL 3.79e-01 -0.0499 0.0566 0.35 Other_T L1
ENSG00000142864 SERBP1 508485 sc-eQTL 5.04e-01 0.0432 0.0646 0.35 Other_T L1
ENSG00000162594 IL23R 799993 sc-eQTL 6.82e-02 -0.103 0.056 0.35 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 884752 sc-eQTL 5.10e-01 0.0677 0.102 0.36 B_Activated L2
ENSG00000116717 GADD45A 253699 sc-eQTL 6.87e-01 -0.0381 0.0944 0.36 B_Activated L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.64e-01 0.0049 0.108 0.36 B_Activated L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 7.89e-01 -0.0247 0.0923 0.35 B_Intermediate L2
ENSG00000116717 GADD45A 253699 sc-eQTL 7.96e-01 0.0211 0.0815 0.35 B_Intermediate L2
ENSG00000142864 SERBP1 508485 sc-eQTL 6.11e-01 0.0455 0.0892 0.35 B_Intermediate L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.40e-01 0.0716 0.0924 0.349 B_Memory L2
ENSG00000116717 GADD45A 253699 sc-eQTL 7.32e-01 -0.0301 0.0878 0.349 B_Memory L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.99e-01 -0.000153 0.0882 0.349 B_Memory L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 3.66e-01 0.0782 0.0864 0.35 B_Naive1 L2
ENSG00000116717 GADD45A 253699 sc-eQTL 9.12e-01 -0.00697 0.0631 0.35 B_Naive1 L2
ENSG00000142864 SERBP1 508485 sc-eQTL 7.24e-01 -0.0277 0.0785 0.35 B_Naive1 L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 6.16e-01 0.0482 0.0958 0.35 B_Naive2 L2
ENSG00000116717 GADD45A 253699 sc-eQTL 6.62e-01 0.0402 0.0919 0.35 B_Naive2 L2
ENSG00000142864 SERBP1 508485 sc-eQTL 4.60e-01 -0.057 0.0771 0.35 B_Naive2 L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.43e-01 0.0687 0.0893 0.352 CD4_CTL L2
ENSG00000116717 GADD45A 253699 sc-eQTL 8.43e-01 0.0164 0.0827 0.352 CD4_CTL L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.01e-01 -0.0118 0.0954 0.352 CD4_CTL L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 8.52e-01 0.0126 0.0672 0.35 CD4_Naive L2
ENSG00000116717 GADD45A 253699 sc-eQTL 7.34e-01 -0.0188 0.0553 0.35 CD4_Naive L2
ENSG00000142864 SERBP1 508485 sc-eQTL 4.78e-01 -0.0385 0.0542 0.35 CD4_Naive L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 1.40e-01 -0.121 0.0817 0.35 CD4_TCM L2
ENSG00000116717 GADD45A 253699 sc-eQTL 6.96e-01 0.021 0.0536 0.35 CD4_TCM L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.08e-01 -0.0178 0.0733 0.35 CD4_TCM L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 9.08e-01 -0.0103 0.0889 0.35 CD4_TEM L2
ENSG00000116717 GADD45A 253699 sc-eQTL 6.23e-02 -0.107 0.0569 0.35 CD4_TEM L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.07e-01 -0.0217 0.0887 0.35 CD4_TEM L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 7.93e-01 -0.0209 0.0797 0.35 CD8_CTL L2
ENSG00000116717 GADD45A 253699 sc-eQTL 2.34e-01 -0.0786 0.0659 0.35 CD8_CTL L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.72e-01 -0.00317 0.09 0.35 CD8_CTL L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 8.86e-01 0.012 0.0833 0.35 CD8_Naive L2
ENSG00000116717 GADD45A 253699 sc-eQTL 9.62e-01 0.00267 0.056 0.35 CD8_Naive L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.83e-01 -0.0104 0.0709 0.35 CD8_Naive L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 2.66e-01 0.102 0.0915 0.361 CD8_TCM L2
ENSG00000116717 GADD45A 253699 sc-eQTL 6.50e-01 -0.0291 0.064 0.361 CD8_TCM L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.17e-01 0.0105 0.1 0.361 CD8_TCM L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 1.19e-01 0.15 0.0958 0.349 CD8_TEM L2
ENSG00000116717 GADD45A 253699 sc-eQTL 4.73e-01 0.0556 0.0774 0.349 CD8_TEM L2
ENSG00000142864 SERBP1 508485 sc-eQTL 7.37e-01 -0.0329 0.0979 0.349 CD8_TEM L2
ENSG00000024526 DEPDC1 -558321 sc-eQTL 8.05e-01 -0.00856 0.0346 0.351 MAIT L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 8.27e-01 0.0208 0.0952 0.351 MAIT L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 3.56e-01 -0.0754 0.0816 0.351 MAIT L2
ENSG00000116717 GADD45A 253699 sc-eQTL 3.03e-01 -0.0736 0.0712 0.351 MAIT L2
ENSG00000142864 SERBP1 508485 sc-eQTL 9.61e-01 0.00436 0.0893 0.351 MAIT L2
ENSG00000162594 IL23R 799993 sc-eQTL 4.89e-02 -0.139 0.07 0.351 MAIT L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 4.35e-01 0.0593 0.0758 0.347 NK_CD56bright L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 6.30e-01 -0.0426 0.0882 0.347 NK_CD56bright L2
ENSG00000116717 GADD45A 253699 sc-eQTL 8.49e-01 0.0168 0.0879 0.347 NK_CD56bright L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.54e-01 -0.0167 0.0905 0.347 NK_CD56bright L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 7.80e-01 -0.0188 0.0672 0.347 NK_CD56dim L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 8.65e-01 0.0132 0.0778 0.347 NK_CD56dim L2
ENSG00000116717 GADD45A 253699 sc-eQTL 7.94e-01 -0.0201 0.0766 0.347 NK_CD56dim L2
ENSG00000142864 SERBP1 508485 sc-eQTL 4.18e-02 -0.148 0.0723 0.347 NK_CD56dim L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 5.80e-01 0.0357 0.0645 0.342 NK_HLA L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 1.64e-01 -0.126 0.0901 0.342 NK_HLA L2
ENSG00000116717 GADD45A 253699 sc-eQTL 2.40e-01 -0.111 0.0944 0.342 NK_HLA L2
ENSG00000142864 SERBP1 508485 sc-eQTL 3.49e-01 0.081 0.0864 0.342 NK_HLA L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 2.99e-01 -0.0802 0.0771 0.347 NK_cytokine L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 2.71e-01 0.0933 0.0846 0.347 NK_cytokine L2
ENSG00000116717 GADD45A 253699 sc-eQTL 9.05e-01 -0.0099 0.0831 0.347 NK_cytokine L2
ENSG00000142864 SERBP1 508485 sc-eQTL 3.18e-01 -0.0794 0.0793 0.347 NK_cytokine L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 3.40e-01 0.105 0.109 0.356 PB L2
ENSG00000116717 GADD45A 253699 sc-eQTL 7.59e-01 -0.0308 0.1 0.356 PB L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.79e-01 0.0112 0.0736 0.356 PB L2
ENSG00000024526 DEPDC1 -558321 sc-eQTL 3.26e-01 0.0566 0.0575 0.352 Pro_T L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 4.47e-01 0.0656 0.0861 0.352 Pro_T L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 3.93e-02 0.193 0.0932 0.352 Pro_T L2
ENSG00000116717 GADD45A 253699 sc-eQTL 3.24e-01 -0.0876 0.0886 0.352 Pro_T L2
ENSG00000142864 SERBP1 508485 sc-eQTL 5.47e-01 0.0377 0.0625 0.352 Pro_T L2
ENSG00000162594 IL23R 799993 sc-eQTL 5.33e-01 -0.0376 0.0603 0.352 Pro_T L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 2.76e-01 -0.103 0.0947 0.35 Treg L2
ENSG00000116717 GADD45A 253699 sc-eQTL 9.13e-01 -0.00789 0.0719 0.35 Treg L2
ENSG00000142864 SERBP1 508485 sc-eQTL 2.49e-01 -0.0932 0.0807 0.35 Treg L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 1.32e-02 0.233 0.0929 0.359 cDC L2
ENSG00000116717 GADD45A 253699 sc-eQTL 8.11e-02 0.176 0.101 0.359 cDC L2
ENSG00000116729 WLS -294220 sc-eQTL 2.38e-01 0.103 0.0869 0.359 cDC L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.43e-01 -0.0161 0.0812 0.359 cDC L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 5.83e-01 0.0536 0.0975 0.35 cMono_IL1B L2
ENSG00000116717 GADD45A 253699 sc-eQTL 3.17e-02 -0.135 0.0624 0.35 cMono_IL1B L2
ENSG00000116729 WLS -294220 sc-eQTL 8.66e-01 -0.0139 0.082 0.35 cMono_IL1B L2
ENSG00000142864 SERBP1 508485 sc-eQTL 4.50e-01 -0.0545 0.072 0.35 cMono_IL1B L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 6.46e-01 -0.0441 0.096 0.35 cMono_S100A L2
ENSG00000116717 GADD45A 253699 sc-eQTL 8.95e-01 -0.0106 0.0805 0.35 cMono_S100A L2
ENSG00000116729 WLS -294220 sc-eQTL 1.77e-01 0.102 0.0751 0.35 cMono_S100A L2
ENSG00000142864 SERBP1 508485 sc-eQTL 7.02e-01 0.0311 0.0811 0.35 cMono_S100A L2
ENSG00000081985 IL12RB2 631536 sc-eQTL 8.55e-01 -0.0151 0.0821 0.342 gdT L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 9.84e-01 -0.00228 0.112 0.342 gdT L2
ENSG00000116717 GADD45A 253699 sc-eQTL 4.33e-01 0.0797 0.102 0.342 gdT L2
ENSG00000142864 SERBP1 508485 sc-eQTL 3.45e-01 0.113 0.12 0.342 gdT L2
ENSG00000162594 IL23R 799993 sc-eQTL 1.25e-01 -0.156 0.101 0.342 gdT L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 7.49e-01 0.0301 0.0941 0.342 intMono L2
ENSG00000116717 GADD45A 253699 sc-eQTL 9.72e-01 0.00297 0.0858 0.342 intMono L2
ENSG00000116729 WLS -294220 sc-eQTL 4.33e-01 -0.0718 0.0914 0.342 intMono L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.56e-01 -0.0162 0.0891 0.342 intMono L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 1.52e-01 0.13 0.0905 0.346 ncMono L2
ENSG00000116717 GADD45A 253699 sc-eQTL 1.41e-01 0.136 0.0918 0.346 ncMono L2
ENSG00000116729 WLS -294220 sc-eQTL 3.02e-01 -0.0874 0.0845 0.346 ncMono L2
ENSG00000142864 SERBP1 508485 sc-eQTL 5.68e-01 -0.0472 0.0826 0.346 ncMono L2
ENSG00000116704 SLC35D1 884752 sc-eQTL 5.80e-01 -0.0564 0.102 0.35 pDC L2
ENSG00000116717 GADD45A 253699 sc-eQTL 4.79e-01 -0.0667 0.094 0.35 pDC L2
ENSG00000116729 WLS -294220 sc-eQTL 7.75e-01 0.0225 0.0788 0.35 pDC L2
ENSG00000142864 SERBP1 508485 sc-eQTL 8.13e-03 0.236 0.088 0.35 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.52e-01 0.0684 0.0908 0.35 B_Memory LOneK1K
ENSG00000116717 GADD45A 253699 sc-eQTL 6.28e-01 0.0373 0.0768 0.35 B_Memory LOneK1K
ENSG00000142864 SERBP1 508485 sc-eQTL 5.16e-01 0.0528 0.0813 0.35 B_Memory LOneK1K
ENSG00000116704 SLC35D1 884752 sc-eQTL 2.78e-01 0.0902 0.083 0.35 B_Naive LOneK1K
ENSG00000116717 GADD45A 253699 sc-eQTL 6.27e-01 0.0304 0.0624 0.35 B_Naive LOneK1K
ENSG00000142864 SERBP1 508485 sc-eQTL 4.04e-01 -0.0566 0.0676 0.35 B_Naive LOneK1K
ENSG00000116704 SLC35D1 884752 sc-eQTL 8.19e-01 0.0229 0.1 0.35 CD14_Mono LOneK1K
ENSG00000116717 GADD45A 253699 sc-eQTL 4.73e-02 -0.123 0.0618 0.35 CD14_Mono LOneK1K
ENSG00000116729 WLS -294220 sc-eQTL 9.63e-01 -0.00341 0.0738 0.35 CD14_Mono LOneK1K
ENSG00000142864 SERBP1 508485 sc-eQTL 7.51e-01 -0.0207 0.0653 0.35 CD14_Mono LOneK1K
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.55e-01 0.0704 0.094 0.349 CD16_Mono LOneK1K
ENSG00000116717 GADD45A 253699 sc-eQTL 5.63e-01 0.0491 0.0847 0.349 CD16_Mono LOneK1K
ENSG00000116729 WLS -294220 sc-eQTL 1.00e-01 -0.146 0.0882 0.349 CD16_Mono LOneK1K
ENSG00000142864 SERBP1 508485 sc-eQTL 8.22e-01 0.0156 0.0694 0.349 CD16_Mono LOneK1K
ENSG00000081985 IL12RB2 631536 sc-eQTL 3.44e-01 -0.0615 0.0649 0.347 NK_CD56dim LOneK1K
ENSG00000116704 SLC35D1 884752 sc-eQTL 4.08e-01 0.0578 0.0696 0.347 NK_CD56dim LOneK1K
ENSG00000116717 GADD45A 253699 sc-eQTL 9.87e-01 -0.00121 0.074 0.347 NK_CD56dim LOneK1K
ENSG00000142864 SERBP1 508485 sc-eQTL 1.75e-01 -0.0923 0.0678 0.347 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116704 SLC35D1 884752 eQTL 0.019 -0.0409 0.0174 0.0 0.0 0.358

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina