logo

Genes within 1Mb (chr1:67926299:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 872151 sc-eQTL 2.04e-01 0.0905 0.0711 0.38 B L1
ENSG00000116717 GADD45A 241098 sc-eQTL 4.00e-01 0.0425 0.0503 0.38 B L1
ENSG00000142864 SERBP1 495884 sc-eQTL 7.05e-01 0.0204 0.0539 0.38 B L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 5.57e-01 -0.0353 0.06 0.38 CD4T L1
ENSG00000116717 GADD45A 241098 sc-eQTL 8.66e-01 0.00848 0.0503 0.38 CD4T L1
ENSG00000142864 SERBP1 495884 sc-eQTL 6.26e-01 0.0242 0.0496 0.38 CD4T L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 8.45e-01 -0.0125 0.0638 0.38 CD8T L1
ENSG00000116717 GADD45A 241098 sc-eQTL 6.80e-01 0.0184 0.0447 0.38 CD8T L1
ENSG00000142864 SERBP1 495884 sc-eQTL 8.61e-01 0.00822 0.0468 0.38 CD8T L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.08e-01 -0.0104 0.09 0.383 DC L1
ENSG00000116717 GADD45A 241098 sc-eQTL 9.48e-01 -0.00576 0.088 0.383 DC L1
ENSG00000116729 WLS -306821 sc-eQTL 2.10e-01 0.0982 0.0781 0.383 DC L1
ENSG00000142864 SERBP1 495884 sc-eQTL 2.97e-01 0.0744 0.0711 0.383 DC L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 8.00e-01 0.0232 0.0916 0.38 Mono L1
ENSG00000116717 GADD45A 241098 sc-eQTL 2.02e-02 -0.129 0.0552 0.38 Mono L1
ENSG00000116729 WLS -306821 sc-eQTL 6.93e-01 -0.0293 0.074 0.38 Mono L1
ENSG00000142864 SERBP1 495884 sc-eQTL 9.51e-01 0.00371 0.0597 0.38 Mono L1
ENSG00000081985 IL12RB2 618935 sc-eQTL 1.77e-01 -0.0781 0.0577 0.378 NK L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 1.47e-01 0.0908 0.0623 0.378 NK L1
ENSG00000116717 GADD45A 241098 sc-eQTL 8.89e-01 0.00946 0.068 0.378 NK L1
ENSG00000142864 SERBP1 495884 sc-eQTL 3.09e-01 -0.0628 0.0616 0.378 NK L1
ENSG00000024526 DEPDC1 -570922 sc-eQTL 8.74e-01 0.00662 0.0418 0.38 Other_T L1
ENSG00000081985 IL12RB2 618935 sc-eQTL 8.76e-01 -0.0125 0.0795 0.38 Other_T L1
ENSG00000116704 SLC35D1 872151 sc-eQTL 1.72e-01 -0.0986 0.072 0.38 Other_T L1
ENSG00000116717 GADD45A 241098 sc-eQTL 4.21e-01 -0.0434 0.0538 0.38 Other_T L1
ENSG00000142864 SERBP1 495884 sc-eQTL 3.15e-01 0.0616 0.0612 0.38 Other_T L1
ENSG00000162594 IL23R 787392 sc-eQTL 2.85e-01 -0.0572 0.0534 0.38 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 872151 sc-eQTL 1.73e-01 0.131 0.0955 0.388 B_Activated L2
ENSG00000116717 GADD45A 241098 sc-eQTL 2.99e-01 -0.0918 0.0881 0.388 B_Activated L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.17e-01 0.0654 0.101 0.388 B_Activated L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 6.17e-01 0.0438 0.0874 0.38 B_Intermediate L2
ENSG00000116717 GADD45A 241098 sc-eQTL 6.72e-01 0.0327 0.0771 0.38 B_Intermediate L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.21e-01 0.0543 0.0845 0.38 B_Intermediate L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 6.57e-01 0.0393 0.0884 0.379 B_Memory L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.82e-01 -0.00192 0.0839 0.379 B_Memory L2
ENSG00000142864 SERBP1 495884 sc-eQTL 8.54e-01 -0.0156 0.0843 0.379 B_Memory L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 7.19e-01 0.0295 0.0819 0.38 B_Naive1 L2
ENSG00000116717 GADD45A 241098 sc-eQTL 2.67e-01 -0.0663 0.0596 0.38 B_Naive1 L2
ENSG00000142864 SERBP1 495884 sc-eQTL 8.54e-01 0.0137 0.0743 0.38 B_Naive1 L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.78e-01 -0.00255 0.0908 0.38 B_Naive2 L2
ENSG00000116717 GADD45A 241098 sc-eQTL 7.96e-01 0.0226 0.087 0.38 B_Naive2 L2
ENSG00000142864 SERBP1 495884 sc-eQTL 9.80e-01 -0.00179 0.0731 0.38 B_Naive2 L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 2.80e-01 0.0945 0.0873 0.375 CD4_CTL L2
ENSG00000116717 GADD45A 241098 sc-eQTL 6.59e-01 0.0357 0.0809 0.375 CD4_CTL L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.83e-01 0.0512 0.0933 0.375 CD4_CTL L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 8.18e-01 0.0148 0.0642 0.38 CD4_Naive L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.50e-01 -0.00329 0.0528 0.38 CD4_Naive L2
ENSG00000142864 SERBP1 495884 sc-eQTL 4.49e-01 0.0393 0.0518 0.38 CD4_Naive L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 1.35e-01 -0.117 0.0778 0.38 CD4_TCM L2
ENSG00000116717 GADD45A 241098 sc-eQTL 8.01e-01 -0.0129 0.051 0.38 CD4_TCM L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.53e-01 0.0219 0.0697 0.38 CD4_TCM L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 8.32e-01 -0.018 0.085 0.38 CD4_TEM L2
ENSG00000116717 GADD45A 241098 sc-eQTL 1.98e-01 -0.0705 0.0546 0.38 CD4_TEM L2
ENSG00000142864 SERBP1 495884 sc-eQTL 3.93e-01 0.0724 0.0846 0.38 CD4_TEM L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 7.76e-01 0.0215 0.0754 0.38 CD8_CTL L2
ENSG00000116717 GADD45A 241098 sc-eQTL 5.84e-02 -0.118 0.0621 0.38 CD8_CTL L2
ENSG00000142864 SERBP1 495884 sc-eQTL 1.29e-01 0.129 0.0847 0.38 CD8_CTL L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 7.66e-01 -0.0238 0.0797 0.38 CD8_Naive L2
ENSG00000116717 GADD45A 241098 sc-eQTL 1.67e-01 0.074 0.0534 0.38 CD8_Naive L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.41e-01 0.0415 0.0678 0.38 CD8_Naive L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 4.84e-01 0.0622 0.0887 0.394 CD8_TCM L2
ENSG00000116717 GADD45A 241098 sc-eQTL 5.79e-01 -0.0344 0.0619 0.394 CD8_TCM L2
ENSG00000142864 SERBP1 495884 sc-eQTL 8.87e-01 0.0138 0.0972 0.394 CD8_TCM L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 2.29e-01 0.113 0.0935 0.377 CD8_TEM L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.42e-01 0.00551 0.0754 0.377 CD8_TEM L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.58e-01 0.0294 0.0953 0.377 CD8_TEM L2
ENSG00000024526 DEPDC1 -570922 sc-eQTL 6.28e-01 0.0162 0.0334 0.379 MAIT L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 7.55e-01 -0.0288 0.0921 0.379 MAIT L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.62e-02 -0.131 0.0786 0.379 MAIT L2
ENSG00000116717 GADD45A 241098 sc-eQTL 3.41e-01 -0.0658 0.0689 0.379 MAIT L2
ENSG00000142864 SERBP1 495884 sc-eQTL 8.86e-01 -0.0124 0.0864 0.379 MAIT L2
ENSG00000162594 IL23R 787392 sc-eQTL 4.91e-01 -0.0472 0.0683 0.379 MAIT L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 6.18e-01 0.0356 0.0713 0.376 NK_CD56bright L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 4.97e-01 0.0563 0.0828 0.376 NK_CD56bright L2
ENSG00000116717 GADD45A 241098 sc-eQTL 4.92e-01 -0.0567 0.0825 0.376 NK_CD56bright L2
ENSG00000142864 SERBP1 495884 sc-eQTL 6.45e-01 -0.0392 0.085 0.376 NK_CD56bright L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 2.80e-01 -0.069 0.0637 0.377 NK_CD56dim L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 6.57e-01 0.0329 0.0738 0.377 NK_CD56dim L2
ENSG00000116717 GADD45A 241098 sc-eQTL 6.80e-01 -0.03 0.0727 0.377 NK_CD56dim L2
ENSG00000142864 SERBP1 495884 sc-eQTL 1.40e-01 -0.102 0.069 0.377 NK_CD56dim L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 4.61e-01 0.0451 0.061 0.374 NK_HLA L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 4.75e-01 -0.0613 0.0856 0.374 NK_HLA L2
ENSG00000116717 GADD45A 241098 sc-eQTL 6.92e-01 -0.0356 0.0897 0.374 NK_HLA L2
ENSG00000142864 SERBP1 495884 sc-eQTL 9.46e-01 -0.00557 0.082 0.374 NK_HLA L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 2.30e-01 -0.0875 0.0728 0.377 NK_cytokine L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 5.72e-01 0.0453 0.0801 0.377 NK_cytokine L2
ENSG00000116717 GADD45A 241098 sc-eQTL 6.92e-01 0.0312 0.0785 0.377 NK_cytokine L2
ENSG00000142864 SERBP1 495884 sc-eQTL 6.09e-01 -0.0385 0.0751 0.377 NK_cytokine L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 4.57e-01 0.0755 0.101 0.396 PB L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.66e-01 -0.00398 0.093 0.396 PB L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.66e-01 0.0203 0.0682 0.396 PB L2
ENSG00000024526 DEPDC1 -570922 sc-eQTL 4.17e-01 0.0454 0.0558 0.38 Pro_T L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 8.30e-01 0.018 0.0838 0.38 Pro_T L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 1.18e-01 0.143 0.0909 0.38 Pro_T L2
ENSG00000116717 GADD45A 241098 sc-eQTL 4.16e-01 -0.0701 0.0861 0.38 Pro_T L2
ENSG00000142864 SERBP1 495884 sc-eQTL 4.37e-01 0.0472 0.0606 0.38 Pro_T L2
ENSG00000162594 IL23R 787392 sc-eQTL 9.46e-01 -0.004 0.0586 0.38 Pro_T L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 3.41e-01 -0.0866 0.0908 0.38 Treg L2
ENSG00000116717 GADD45A 241098 sc-eQTL 7.27e-01 0.0241 0.0689 0.38 Treg L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.45e-01 -0.0252 0.0775 0.38 Treg L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 5.38e-02 0.173 0.0889 0.39 cDC L2
ENSG00000116717 GADD45A 241098 sc-eQTL 1.19e-01 0.15 0.0958 0.39 cDC L2
ENSG00000116729 WLS -306821 sc-eQTL 3.18e-01 0.0828 0.0827 0.39 cDC L2
ENSG00000142864 SERBP1 495884 sc-eQTL 4.92e-01 0.0531 0.0771 0.39 cDC L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 6.67e-01 0.04 0.093 0.38 cMono_IL1B L2
ENSG00000116717 GADD45A 241098 sc-eQTL 4.30e-02 -0.121 0.0596 0.38 cMono_IL1B L2
ENSG00000116729 WLS -306821 sc-eQTL 6.92e-01 -0.031 0.0782 0.38 cMono_IL1B L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.63e-01 -0.0398 0.0687 0.38 cMono_IL1B L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 5.30e-01 -0.0579 0.092 0.38 cMono_S100A L2
ENSG00000116717 GADD45A 241098 sc-eQTL 3.21e-01 -0.0766 0.0769 0.38 cMono_S100A L2
ENSG00000116729 WLS -306821 sc-eQTL 3.64e-01 0.0656 0.0721 0.38 cMono_S100A L2
ENSG00000142864 SERBP1 495884 sc-eQTL 2.61e-01 0.0873 0.0775 0.38 cMono_S100A L2
ENSG00000081985 IL12RB2 618935 sc-eQTL 7.70e-01 0.0244 0.0833 0.364 gdT L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 3.31e-01 -0.11 0.113 0.364 gdT L2
ENSG00000116717 GADD45A 241098 sc-eQTL 7.00e-01 0.0398 0.103 0.364 gdT L2
ENSG00000142864 SERBP1 495884 sc-eQTL 5.75e-01 0.0684 0.122 0.364 gdT L2
ENSG00000162594 IL23R 787392 sc-eQTL 8.23e-01 -0.0232 0.103 0.364 gdT L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 7.02e-01 0.0348 0.0907 0.373 intMono L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.76e-01 -0.00248 0.0828 0.373 intMono L2
ENSG00000116729 WLS -306821 sc-eQTL 8.26e-01 -0.0194 0.0883 0.373 intMono L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.04e-01 0.0326 0.0858 0.373 intMono L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.45e-01 0.00599 0.0864 0.373 ncMono L2
ENSG00000116717 GADD45A 241098 sc-eQTL 7.93e-01 -0.0231 0.0877 0.373 ncMono L2
ENSG00000116729 WLS -306821 sc-eQTL 9.52e-02 -0.134 0.0799 0.373 ncMono L2
ENSG00000142864 SERBP1 495884 sc-eQTL 7.49e-01 -0.0252 0.0785 0.373 ncMono L2
ENSG00000116704 SLC35D1 872151 sc-eQTL 3.60e-01 -0.0877 0.0955 0.384 pDC L2
ENSG00000116717 GADD45A 241098 sc-eQTL 9.77e-01 0.00255 0.0884 0.384 pDC L2
ENSG00000116729 WLS -306821 sc-eQTL 9.25e-01 0.00698 0.074 0.384 pDC L2
ENSG00000142864 SERBP1 495884 sc-eQTL 4.38e-02 0.17 0.0835 0.384 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 872151 sc-eQTL 2.01e-01 0.111 0.0863 0.38 B_Memory LOneK1K
ENSG00000116717 GADD45A 241098 sc-eQTL 3.34e-01 0.0708 0.0731 0.38 B_Memory LOneK1K
ENSG00000142864 SERBP1 495884 sc-eQTL 3.54e-01 0.0719 0.0774 0.38 B_Memory LOneK1K
ENSG00000116704 SLC35D1 872151 sc-eQTL 8.71e-01 0.0129 0.0791 0.38 B_Naive LOneK1K
ENSG00000116717 GADD45A 241098 sc-eQTL 4.61e-01 -0.0438 0.0593 0.38 B_Naive LOneK1K
ENSG00000142864 SERBP1 495884 sc-eQTL 9.87e-01 0.00101 0.0644 0.38 B_Naive LOneK1K
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.38e-01 0.00751 0.0959 0.38 CD14_Mono LOneK1K
ENSG00000116717 GADD45A 241098 sc-eQTL 2.04e-02 -0.138 0.059 0.38 CD14_Mono LOneK1K
ENSG00000116729 WLS -306821 sc-eQTL 7.72e-01 -0.0205 0.0707 0.38 CD14_Mono LOneK1K
ENSG00000142864 SERBP1 495884 sc-eQTL 9.13e-01 0.00684 0.0626 0.38 CD14_Mono LOneK1K
ENSG00000116704 SLC35D1 872151 sc-eQTL 9.39e-01 0.00687 0.09 0.379 CD16_Mono LOneK1K
ENSG00000116717 GADD45A 241098 sc-eQTL 7.40e-01 -0.0269 0.081 0.379 CD16_Mono LOneK1K
ENSG00000116729 WLS -306821 sc-eQTL 7.21e-02 -0.152 0.0842 0.379 CD16_Mono LOneK1K
ENSG00000142864 SERBP1 495884 sc-eQTL 3.66e-01 0.06 0.0662 0.379 CD16_Mono LOneK1K
ENSG00000081985 IL12RB2 618935 sc-eQTL 1.41e-01 -0.0904 0.0612 0.377 NK_CD56dim LOneK1K
ENSG00000116704 SLC35D1 872151 sc-eQTL 3.03e-01 0.0679 0.0657 0.377 NK_CD56dim LOneK1K
ENSG00000116717 GADD45A 241098 sc-eQTL 6.64e-01 0.0305 0.0699 0.377 NK_CD56dim LOneK1K
ENSG00000142864 SERBP1 495884 sc-eQTL 3.72e-01 -0.0574 0.0642 0.377 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116704 SLC35D1 872151 eQTL 0.00961 -0.0444 0.0171 0.0 0.0 0.393
ENSG00000116729 WLS -306821 eQTL 0.0287 0.0524 0.0239 0.0 0.0 0.393

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142864 \N 495884 3.77e-07 2.5e-07 6.72e-08 2.36e-07 1.01e-07 8.75e-08 3.25e-07 5.78e-08 1.86e-07 1.11e-07 2.18e-07 1.82e-07 2.94e-07 8.42e-08 7.98e-08 1.01e-07 6.63e-08 2.33e-07 7.11e-08 6.16e-08 1.33e-07 1.98e-07 2e-07 4.15e-08 2.86e-07 1.51e-07 1.31e-07 1.42e-07 1.44e-07 1.85e-07 1.39e-07 5.22e-08 3.8e-08 9.72e-08 4.04e-08 3.3e-08 6.04e-08 8.25e-08 5.25e-08 6.79e-08 4.07e-08 2.71e-07 3.09e-08 1.11e-08 4e-08 6.39e-09 7e-08 0.0 4.94e-08