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Genes within 1Mb (chr1:67092677:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116704 SLC35D1 38529 sc-eQTL 3.69e-02 -0.444 0.211 0.054 B_Activated L2
ENSG00000116717 GADD45A -592524 sc-eQTL 4.52e-01 -0.148 0.197 0.054 B_Activated L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 6.38e-03 0.608 0.22 0.054 B_Activated L2
ENSG00000198160 MIER1 167782 sc-eQTL 9.02e-02 -0.391 0.23 0.054 B_Activated L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 6.53e-01 0.0818 0.182 0.052 CD4_CTL L2
ENSG00000116717 GADD45A -592524 sc-eQTL 5.49e-01 0.101 0.168 0.052 CD4_CTL L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 4.74e-01 0.139 0.194 0.052 CD4_CTL L2
ENSG00000198160 MIER1 167782 sc-eQTL 8.18e-01 -0.0448 0.195 0.052 CD4_CTL L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 4.79e-03 0.558 0.195 0.051 CD8_TCM L2
ENSG00000116717 GADD45A -592524 sc-eQTL 2.96e-01 0.145 0.139 0.051 CD8_TCM L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 6.72e-01 0.0927 0.218 0.051 CD8_TCM L2
ENSG00000198160 MIER1 167782 sc-eQTL 3.91e-01 -0.162 0.188 0.051 CD8_TCM L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 3.13e-01 0.201 0.199 0.05 CD8_TEM L2
ENSG00000116717 GADD45A -592524 sc-eQTL 8.09e-01 0.0386 0.16 0.05 CD8_TEM L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 7.90e-01 0.054 0.202 0.05 CD8_TEM L2
ENSG00000198160 MIER1 167782 sc-eQTL 5.28e-01 -0.122 0.193 0.05 CD8_TEM L2
ENSG00000081985 IL12RB2 -214687 sc-eQTL 8.88e-01 0.0189 0.134 0.053 NK_HLA L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 4.64e-01 0.138 0.188 0.053 NK_HLA L2
ENSG00000116717 GADD45A -592524 sc-eQTL 7.61e-02 0.348 0.195 0.053 NK_HLA L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 9.31e-02 -0.301 0.179 0.053 NK_HLA L2
ENSG00000198160 MIER1 167782 sc-eQTL 3.18e-01 0.179 0.178 0.053 NK_HLA L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 2.05e-01 -0.274 0.215 0.056 PB L2
ENSG00000116717 GADD45A -592524 sc-eQTL 9.51e-01 -0.0122 0.199 0.056 PB L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 8.91e-01 0.0199 0.146 0.056 PB L2
ENSG00000198160 MIER1 167782 sc-eQTL 3.02e-01 -0.248 0.239 0.056 PB L2
ENSG00000081985 IL12RB2 -214687 sc-eQTL 1.75e-02 -0.444 0.186 0.05 Pro_T L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 5.80e-01 0.114 0.205 0.05 Pro_T L2
ENSG00000116717 GADD45A -592524 sc-eQTL 7.29e-01 -0.0671 0.194 0.05 Pro_T L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 3.90e-01 0.117 0.136 0.05 Pro_T L2
ENSG00000162594 IL23R -46230 sc-eQTL 6.15e-01 0.0662 0.132 0.05 Pro_T L2
ENSG00000198160 MIER1 167782 sc-eQTL 6.43e-01 0.0929 0.2 0.05 Pro_T L2
ENSG00000116704 SLC35D1 38529 sc-eQTL 1.97e-01 0.245 0.19 0.051 intMono L2
ENSG00000116717 GADD45A -592524 sc-eQTL 9.64e-01 -0.00778 0.174 0.051 intMono L2
ENSG00000142864 SERBP1 -337738 sc-eQTL 2.29e-01 0.217 0.179 0.051 intMono L2
ENSG00000198160 MIER1 167782 sc-eQTL 1.33e-01 -0.28 0.186 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116704 SLC35D1 38529 eQTL 5.11e-06 0.185 0.0404 0.0 0.0 0.0471
ENSG00000198160 MIER1 167782 eQTL 0.00778 0.0522 0.0196 0.0 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116704 SLC35D1 38529 8.39e-06 1.13e-05 1.29e-06 6.74e-06 2.12e-06 4.14e-06 1.02e-05 1.52e-06 6.4e-06 4.62e-06 1.08e-05 4.9e-06 1.64e-05 3.72e-06 2.19e-06 6.06e-06 4.79e-06 5.9e-06 2.69e-06 2.94e-06 4.66e-06 8.06e-06 7.14e-06 3.21e-06 1.37e-05 2.55e-06 4.48e-06 3.68e-06 9.94e-06 1.02e-05 5.14e-06 5.55e-07 1.19e-06 3.06e-06 4.48e-06 2.62e-06 1.74e-06 1.84e-06 2.19e-06 1.03e-06 7.18e-07 1.3e-05 1.14e-06 1.64e-07 7.63e-07 1.36e-06 8.75e-07 7.55e-07 4.82e-07
ENSG00000152760 \N 340218 1.27e-06 9.36e-07 2.84e-07 6.31e-07 1.04e-07 3.54e-07 6.72e-07 1.65e-07 7.15e-07 3.12e-07 1.1e-06 4.94e-07 1.58e-06 2.61e-07 3.94e-07 3.57e-07 7.68e-07 4.65e-07 2.88e-07 4.13e-07 2.55e-07 5.36e-07 4.69e-07 3.53e-07 1.64e-06 2.74e-07 4.37e-07 4.96e-07 5.41e-07 8.63e-07 4.59e-07 1.86e-07 9.36e-08 4.54e-07 3.96e-07 4.34e-07 5.17e-07 1.18e-07 1.49e-07 8.93e-08 9.77e-08 1.01e-06 5.84e-08 1.99e-08 1.48e-07 5.38e-08 1.32e-07 7.75e-08 5.39e-08
ENSG00000198160 MIER1 167782 2.69e-06 2.63e-06 3.29e-07 1.96e-06 4.51e-07 8.24e-07 1.29e-06 3.95e-07 1.78e-06 7.58e-07 1.93e-06 1.45e-06 3.75e-06 1.4e-06 4.8e-07 1.1e-06 1.18e-06 1.55e-06 6.25e-07 1.11e-06 6.56e-07 2.02e-06 1.75e-06 9.38e-07 3.4e-06 9.19e-07 1.15e-06 1.54e-06 1.69e-06 1.93e-06 1.25e-06 2.49e-07 3.95e-07 1.25e-06 1.31e-06 1e-06 8.38e-07 3.46e-07 1.21e-06 4.17e-07 2.58e-07 3.06e-06 4.24e-07 9.69e-08 2.74e-07 2.82e-07 2.71e-07 2.45e-07 2.47e-07