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Genes within 1Mb (chr1:65914659:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 846905 sc-eQTL 1.61e-01 -0.0813 0.0578 0.353 B L1
ENSG00000184588 PDE4B 122145 sc-eQTL 8.17e-02 -0.105 0.0602 0.353 B L1
ENSG00000213625 LEPROT 494072 sc-eQTL 3.42e-02 -0.156 0.0734 0.353 B L1
ENSG00000162434 JAK1 846905 sc-eQTL 1.11e-02 -0.145 0.0567 0.353 CD4T L1
ENSG00000184588 PDE4B 122145 sc-eQTL 3.98e-01 -0.0581 0.0686 0.353 CD4T L1
ENSG00000213625 LEPROT 494072 sc-eQTL 1.18e-01 -0.14 0.0895 0.353 CD4T L1
ENSG00000116678 LEPR 494007 sc-eQTL 4.42e-01 -0.0728 0.0945 0.353 CD8T L1
ENSG00000162434 JAK1 846905 sc-eQTL 4.93e-02 -0.144 0.0727 0.353 CD8T L1
ENSG00000184588 PDE4B 122145 sc-eQTL 3.14e-01 -0.063 0.0625 0.353 CD8T L1
ENSG00000213625 LEPROT 494072 sc-eQTL 5.63e-01 -0.0563 0.0972 0.353 CD8T L1
ENSG00000116678 LEPR 494007 sc-eQTL 4.74e-01 -0.0683 0.0952 0.349 DC L1
ENSG00000162433 AK4 767110 sc-eQTL 8.44e-01 -0.0158 0.0802 0.349 DC L1
ENSG00000162434 JAK1 846905 sc-eQTL 1.08e-01 -0.107 0.0662 0.349 DC L1
ENSG00000184588 PDE4B 122145 sc-eQTL 7.91e-01 -0.0137 0.0517 0.349 DC L1
ENSG00000213625 LEPROT 494072 sc-eQTL 8.63e-01 0.0163 0.0946 0.349 DC L1
ENSG00000285079 AL513493.1 210697 sc-eQTL 7.84e-01 0.014 0.0509 0.349 DC L1
ENSG00000116678 LEPR 494007 sc-eQTL 3.71e-01 0.0838 0.0935 0.353 Mono L1
ENSG00000162433 AK4 767110 sc-eQTL 2.23e-01 0.104 0.0854 0.353 Mono L1
ENSG00000162434 JAK1 846905 sc-eQTL 2.03e-02 -0.141 0.0603 0.353 Mono L1
ENSG00000184588 PDE4B 122145 sc-eQTL 6.39e-02 -0.0625 0.0336 0.353 Mono L1
ENSG00000213625 LEPROT 494072 sc-eQTL 3.75e-01 -0.0537 0.0604 0.353 Mono L1
ENSG00000116678 LEPR 494007 sc-eQTL 6.55e-01 0.0416 0.0931 0.35 NK L1
ENSG00000162434 JAK1 846905 sc-eQTL 2.51e-01 -0.0505 0.0439 0.35 NK L1
ENSG00000184588 PDE4B 122145 sc-eQTL 2.95e-01 0.0629 0.0599 0.35 NK L1
ENSG00000213625 LEPROT 494072 sc-eQTL 3.68e-01 -0.0905 0.1 0.35 NK L1
ENSG00000162434 JAK1 846905 sc-eQTL 2.57e-01 -0.0709 0.0624 0.353 Other_T L1
ENSG00000184588 PDE4B 122145 sc-eQTL 3.12e-01 -0.0687 0.0679 0.353 Other_T L1
ENSG00000213625 LEPROT 494072 sc-eQTL 7.22e-01 -0.0351 0.0983 0.353 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 846905 sc-eQTL 2.00e-01 -0.133 0.103 0.347 B_Activated L2
ENSG00000184588 PDE4B 122145 sc-eQTL 5.16e-01 -0.0535 0.0821 0.347 B_Activated L2
ENSG00000213625 LEPROT 494072 sc-eQTL 3.02e-01 0.112 0.108 0.347 B_Activated L2
ENSG00000162434 JAK1 846905 sc-eQTL 4.60e-03 -0.23 0.0804 0.352 B_Intermediate L2
ENSG00000184588 PDE4B 122145 sc-eQTL 2.52e-01 -0.0764 0.0666 0.352 B_Intermediate L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.10e-01 -0.153 0.0955 0.352 B_Intermediate L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.70e-01 -0.112 0.0817 0.353 B_Memory L2
ENSG00000184588 PDE4B 122145 sc-eQTL 2.19e-02 -0.191 0.0828 0.353 B_Memory L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.13e-01 -0.151 0.0948 0.353 B_Memory L2
ENSG00000162434 JAK1 846905 sc-eQTL 6.96e-01 -0.0288 0.0737 0.353 B_Naive1 L2
ENSG00000184588 PDE4B 122145 sc-eQTL 1.80e-01 -0.0952 0.0707 0.353 B_Naive1 L2
ENSG00000213625 LEPROT 494072 sc-eQTL 4.41e-01 -0.0741 0.096 0.353 B_Naive1 L2
ENSG00000162434 JAK1 846905 sc-eQTL 6.81e-01 0.0321 0.0781 0.354 B_Naive2 L2
ENSG00000184588 PDE4B 122145 sc-eQTL 1.20e-01 -0.0958 0.0614 0.354 B_Naive2 L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.02e-01 -0.154 0.0936 0.354 B_Naive2 L2
ENSG00000162434 JAK1 846905 sc-eQTL 3.66e-01 -0.0827 0.0913 0.359 CD4_CTL L2
ENSG00000184588 PDE4B 122145 sc-eQTL 3.86e-01 -0.0702 0.0808 0.359 CD4_CTL L2
ENSG00000213625 LEPROT 494072 sc-eQTL 6.02e-02 -0.197 0.104 0.359 CD4_CTL L2
ENSG00000162434 JAK1 846905 sc-eQTL 2.61e-02 -0.125 0.0558 0.353 CD4_Naive L2
ENSG00000184588 PDE4B 122145 sc-eQTL 6.24e-01 -0.0347 0.0706 0.353 CD4_Naive L2
ENSG00000213625 LEPROT 494072 sc-eQTL 2.63e-01 -0.102 0.0913 0.353 CD4_Naive L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.49e-02 -0.154 0.0628 0.353 CD4_TCM L2
ENSG00000184588 PDE4B 122145 sc-eQTL 2.25e-01 -0.0885 0.0727 0.353 CD4_TCM L2
ENSG00000213625 LEPROT 494072 sc-eQTL 4.50e-01 -0.0698 0.0923 0.353 CD4_TCM L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.29e-01 -0.129 0.0846 0.353 CD4_TEM L2
ENSG00000184588 PDE4B 122145 sc-eQTL 5.46e-01 -0.0475 0.0785 0.353 CD4_TEM L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.42e-01 -0.148 0.1 0.353 CD4_TEM L2
ENSG00000116678 LEPR 494007 sc-eQTL 6.53e-01 0.042 0.0933 0.353 CD8_CTL L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.17e-01 -0.123 0.078 0.353 CD8_CTL L2
ENSG00000184588 PDE4B 122145 sc-eQTL 7.24e-02 -0.13 0.072 0.353 CD8_CTL L2
ENSG00000213625 LEPROT 494072 sc-eQTL 3.95e-01 -0.0815 0.0957 0.353 CD8_CTL L2
ENSG00000116678 LEPR 494007 sc-eQTL 6.75e-01 -0.0397 0.0944 0.353 CD8_Naive L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.28e-02 -0.195 0.0776 0.353 CD8_Naive L2
ENSG00000184588 PDE4B 122145 sc-eQTL 5.14e-01 -0.0432 0.0661 0.353 CD8_Naive L2
ENSG00000213625 LEPROT 494072 sc-eQTL 9.91e-01 -0.00103 0.0965 0.353 CD8_Naive L2
ENSG00000116678 LEPR 494007 sc-eQTL 1.51e-01 -0.136 0.0944 0.359 CD8_TCM L2
ENSG00000162434 JAK1 846905 sc-eQTL 2.16e-01 -0.102 0.0821 0.359 CD8_TCM L2
ENSG00000184588 PDE4B 122145 sc-eQTL 1.35e-01 -0.135 0.0902 0.359 CD8_TCM L2
ENSG00000213625 LEPROT 494072 sc-eQTL 5.42e-01 -0.0627 0.103 0.359 CD8_TCM L2
ENSG00000116678 LEPR 494007 sc-eQTL 9.67e-01 0.00357 0.0849 0.356 CD8_TEM L2
ENSG00000162434 JAK1 846905 sc-eQTL 3.48e-01 -0.0901 0.0958 0.356 CD8_TEM L2
ENSG00000184588 PDE4B 122145 sc-eQTL 9.05e-01 0.00978 0.0816 0.356 CD8_TEM L2
ENSG00000213625 LEPROT 494072 sc-eQTL 5.15e-01 -0.0645 0.0989 0.356 CD8_TEM L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.40e-01 -0.126 0.0848 0.353 MAIT L2
ENSG00000184588 PDE4B 122145 sc-eQTL 9.19e-01 -0.00742 0.0729 0.353 MAIT L2
ENSG00000213625 LEPROT 494072 sc-eQTL 9.02e-01 0.0121 0.0982 0.353 MAIT L2
ENSG00000116678 LEPR 494007 sc-eQTL 2.70e-01 0.101 0.0918 0.351 NK_CD56bright L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.78e-01 -0.0849 0.0628 0.351 NK_CD56bright L2
ENSG00000184588 PDE4B 122145 sc-eQTL 1.91e-01 0.0989 0.0754 0.351 NK_CD56bright L2
ENSG00000213625 LEPROT 494072 sc-eQTL 4.71e-01 -0.0747 0.103 0.351 NK_CD56bright L2
ENSG00000116678 LEPR 494007 sc-eQTL 6.87e-01 0.0395 0.0979 0.351 NK_CD56dim L2
ENSG00000162434 JAK1 846905 sc-eQTL 3.21e-01 -0.0507 0.051 0.351 NK_CD56dim L2
ENSG00000184588 PDE4B 122145 sc-eQTL 6.92e-01 0.0297 0.0747 0.351 NK_CD56dim L2
ENSG00000213625 LEPROT 494072 sc-eQTL 4.20e-01 -0.0835 0.103 0.351 NK_CD56dim L2
ENSG00000116678 LEPR 494007 sc-eQTL 4.52e-01 -0.0655 0.0868 0.354 NK_HLA L2
ENSG00000162434 JAK1 846905 sc-eQTL 8.18e-01 0.0156 0.0677 0.354 NK_HLA L2
ENSG00000184588 PDE4B 122145 sc-eQTL 7.36e-01 0.0278 0.0824 0.354 NK_HLA L2
ENSG00000213625 LEPROT 494072 sc-eQTL 5.65e-01 -0.0605 0.105 0.354 NK_HLA L2
ENSG00000116678 LEPR 494007 sc-eQTL 9.52e-01 -0.00559 0.0936 0.351 NK_cytokine L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.22e-01 -0.0841 0.0542 0.351 NK_cytokine L2
ENSG00000184588 PDE4B 122145 sc-eQTL 3.81e-01 0.0749 0.0853 0.351 NK_cytokine L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.93e-01 -0.129 0.0987 0.351 NK_cytokine L2
ENSG00000162434 JAK1 846905 sc-eQTL 2.64e-01 -0.0994 0.0885 0.307 PB L2
ENSG00000184588 PDE4B 122145 sc-eQTL 3.05e-01 -0.116 0.113 0.307 PB L2
ENSG00000213625 LEPROT 494072 sc-eQTL 6.05e-02 -0.233 0.123 0.307 PB L2
ENSG00000162434 JAK1 846905 sc-eQTL 4.23e-01 0.0501 0.0624 0.357 Pro_T L2
ENSG00000184588 PDE4B 122145 sc-eQTL 3.62e-01 -0.07 0.0766 0.357 Pro_T L2
ENSG00000213625 LEPROT 494072 sc-eQTL 3.43e-01 -0.0922 0.097 0.357 Pro_T L2
ENSG00000162434 JAK1 846905 sc-eQTL 8.81e-02 -0.135 0.0787 0.353 Treg L2
ENSG00000184588 PDE4B 122145 sc-eQTL 4.11e-01 -0.0595 0.0722 0.353 Treg L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.99e-02 -0.238 0.101 0.353 Treg L2
ENSG00000116678 LEPR 494007 sc-eQTL 5.66e-01 -0.0565 0.0983 0.341 cDC L2
ENSG00000162433 AK4 767110 sc-eQTL 7.49e-01 0.0279 0.0869 0.341 cDC L2
ENSG00000162434 JAK1 846905 sc-eQTL 3.24e-01 -0.08 0.0809 0.341 cDC L2
ENSG00000184588 PDE4B 122145 sc-eQTL 5.24e-01 -0.0347 0.0544 0.341 cDC L2
ENSG00000213625 LEPROT 494072 sc-eQTL 5.16e-01 0.0643 0.0988 0.341 cDC L2
ENSG00000285079 AL513493.1 210697 sc-eQTL 3.93e-01 0.0304 0.0355 0.341 cDC L2
ENSG00000116678 LEPR 494007 sc-eQTL 4.16e-01 0.0772 0.0947 0.353 cMono_IL1B L2
ENSG00000162433 AK4 767110 sc-eQTL 8.17e-01 0.0202 0.0873 0.353 cMono_IL1B L2
ENSG00000162434 JAK1 846905 sc-eQTL 3.93e-03 -0.227 0.0778 0.353 cMono_IL1B L2
ENSG00000184588 PDE4B 122145 sc-eQTL 8.83e-01 -0.00647 0.044 0.353 cMono_IL1B L2
ENSG00000213625 LEPROT 494072 sc-eQTL 1.89e-01 -0.0842 0.0639 0.353 cMono_IL1B L2
ENSG00000116678 LEPR 494007 sc-eQTL 3.79e-01 0.0816 0.0925 0.353 cMono_S100A L2
ENSG00000162433 AK4 767110 sc-eQTL 3.19e-01 0.0877 0.0877 0.353 cMono_S100A L2
ENSG00000162434 JAK1 846905 sc-eQTL 4.19e-01 -0.0656 0.081 0.353 cMono_S100A L2
ENSG00000184588 PDE4B 122145 sc-eQTL 7.67e-01 -0.0136 0.0459 0.353 cMono_S100A L2
ENSG00000213625 LEPROT 494072 sc-eQTL 3.89e-01 -0.0654 0.0758 0.353 cMono_S100A L2
ENSG00000162434 JAK1 846905 sc-eQTL 1.10e-01 -0.18 0.112 0.379 gdT L2
ENSG00000184588 PDE4B 122145 sc-eQTL 6.68e-01 -0.0282 0.0657 0.379 gdT L2
ENSG00000213625 LEPROT 494072 sc-eQTL 9.53e-01 0.00701 0.119 0.379 gdT L2
ENSG00000116678 LEPR 494007 sc-eQTL 8.29e-01 0.0201 0.0932 0.342 intMono L2
ENSG00000162433 AK4 767110 sc-eQTL 3.15e-01 0.0882 0.0876 0.342 intMono L2
ENSG00000162434 JAK1 846905 sc-eQTL 4.10e-01 -0.0669 0.0811 0.342 intMono L2
ENSG00000184588 PDE4B 122145 sc-eQTL 4.51e-01 -0.0354 0.0468 0.342 intMono L2
ENSG00000213625 LEPROT 494072 sc-eQTL 9.08e-01 0.0091 0.0783 0.342 intMono L2
ENSG00000116678 LEPR 494007 sc-eQTL 4.57e-01 0.068 0.0911 0.348 ncMono L2
ENSG00000162433 AK4 767110 sc-eQTL 8.71e-01 -0.0132 0.0814 0.348 ncMono L2
ENSG00000162434 JAK1 846905 sc-eQTL 4.04e-02 -0.134 0.0651 0.348 ncMono L2
ENSG00000184588 PDE4B 122145 sc-eQTL 9.80e-01 0.00133 0.0523 0.348 ncMono L2
ENSG00000213625 LEPROT 494072 sc-eQTL 3.49e-01 -0.0875 0.0932 0.348 ncMono L2
ENSG00000116678 LEPR 494007 sc-eQTL 2.36e-01 0.119 0.0997 0.333 pDC L2
ENSG00000162433 AK4 767110 sc-eQTL 1.94e-01 0.0848 0.0649 0.333 pDC L2
ENSG00000162434 JAK1 846905 sc-eQTL 6.03e-02 -0.163 0.0862 0.333 pDC L2
ENSG00000184588 PDE4B 122145 sc-eQTL 6.44e-01 0.0352 0.076 0.333 pDC L2
ENSG00000213625 LEPROT 494072 sc-eQTL 9.16e-01 -0.0114 0.108 0.333 pDC L2
ENSG00000285079 AL513493.1 210697 sc-eQTL 9.24e-01 0.00778 0.0817 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 846905 sc-eQTL 1.28e-02 -0.179 0.0711 0.353 B_Memory LOneK1K
ENSG00000184588 PDE4B 122145 sc-eQTL 1.52e-01 -0.0848 0.059 0.353 B_Memory LOneK1K
ENSG00000213625 LEPROT 494072 sc-eQTL 4.16e-02 -0.188 0.0918 0.353 B_Memory LOneK1K
ENSG00000162434 JAK1 846905 sc-eQTL 6.55e-01 -0.0318 0.071 0.353 B_Naive LOneK1K
ENSG00000184588 PDE4B 122145 sc-eQTL 6.57e-02 -0.117 0.0633 0.353 B_Naive LOneK1K
ENSG00000213625 LEPROT 494072 sc-eQTL 7.67e-02 -0.158 0.0891 0.353 B_Naive LOneK1K
ENSG00000116678 LEPR 494007 sc-eQTL 3.67e-01 0.0838 0.0927 0.353 CD14_Mono LOneK1K
ENSG00000162433 AK4 767110 sc-eQTL 2.45e-01 0.103 0.0886 0.353 CD14_Mono LOneK1K
ENSG00000162434 JAK1 846905 sc-eQTL 1.61e-02 -0.178 0.0734 0.353 CD14_Mono LOneK1K
ENSG00000184588 PDE4B 122145 sc-eQTL 5.69e-01 -0.0216 0.0379 0.353 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 494072 sc-eQTL 1.44e-01 -0.0911 0.062 0.353 CD14_Mono LOneK1K
ENSG00000116678 LEPR 494007 sc-eQTL 8.91e-01 0.0127 0.0926 0.351 CD16_Mono LOneK1K
ENSG00000162433 AK4 767110 sc-eQTL 7.02e-01 0.0321 0.0838 0.351 CD16_Mono LOneK1K
ENSG00000162434 JAK1 846905 sc-eQTL 2.75e-02 -0.124 0.0557 0.351 CD16_Mono LOneK1K
ENSG00000184588 PDE4B 122145 sc-eQTL 7.25e-01 -0.0152 0.0431 0.351 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 494072 sc-eQTL 7.04e-01 -0.0299 0.0786 0.351 CD16_Mono LOneK1K
ENSG00000116678 LEPR 494007 sc-eQTL 9.46e-01 0.0064 0.0953 0.351 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 846905 sc-eQTL 2.00e-01 -0.0572 0.0445 0.351 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B 122145 sc-eQTL 6.25e-01 0.0339 0.0692 0.351 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 494072 sc-eQTL 1.93e-01 -0.129 0.0984 0.351 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000152760 TCTEX1D1 -837800 eQTL 0.0119 -0.0752 0.0298 0.0 0.0 0.345
ENSG00000226891 LINC01359 912170 eQTL 0.0386 -0.0619 0.0299 0.0 0.0 0.345
ENSG00000231485 AL357078.1 846922 eQTL 0.0712 0.0753 0.0417 0.00103 0.0 0.345

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina