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Genes within 1Mb (chr1:65877391:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 809637 sc-eQTL 4.21e-01 0.0438 0.0543 0.421 B L1
ENSG00000184588 PDE4B 84877 sc-eQTL 3.77e-02 0.118 0.0562 0.421 B L1
ENSG00000213625 LEPROT 456804 sc-eQTL 8.02e-01 0.0174 0.0695 0.421 B L1
ENSG00000162434 JAK1 809637 sc-eQTL 7.75e-02 0.0961 0.0542 0.421 CD4T L1
ENSG00000184588 PDE4B 84877 sc-eQTL 5.72e-01 -0.0368 0.065 0.421 CD4T L1
ENSG00000213625 LEPROT 456804 sc-eQTL 1.36e-01 0.127 0.0849 0.421 CD4T L1
ENSG00000116678 LEPR 456739 sc-eQTL 5.00e-01 -0.0603 0.0893 0.421 CD8T L1
ENSG00000162434 JAK1 809637 sc-eQTL 2.46e-03 0.208 0.0678 0.421 CD8T L1
ENSG00000184588 PDE4B 84877 sc-eQTL 7.34e-01 -0.0201 0.0591 0.421 CD8T L1
ENSG00000213625 LEPROT 456804 sc-eQTL 5.31e-01 0.0576 0.0918 0.421 CD8T L1
ENSG00000116678 LEPR 456739 sc-eQTL 6.97e-01 0.0345 0.0885 0.423 DC L1
ENSG00000162433 AK4 729842 sc-eQTL 1.07e-01 0.12 0.0739 0.423 DC L1
ENSG00000162434 JAK1 809637 sc-eQTL 4.39e-01 0.0479 0.0618 0.423 DC L1
ENSG00000184588 PDE4B 84877 sc-eQTL 1.34e-01 0.0717 0.0477 0.423 DC L1
ENSG00000213625 LEPROT 456804 sc-eQTL 4.52e-01 0.066 0.0877 0.423 DC L1
ENSG00000285079 AL513493.1 173429 sc-eQTL 5.29e-01 -0.0298 0.0472 0.423 DC L1
ENSG00000116678 LEPR 456739 sc-eQTL 6.73e-01 0.0377 0.089 0.421 Mono L1
ENSG00000162433 AK4 729842 sc-eQTL 5.34e-01 -0.0507 0.0814 0.421 Mono L1
ENSG00000162434 JAK1 809637 sc-eQTL 2.28e-01 0.07 0.0579 0.421 Mono L1
ENSG00000184588 PDE4B 84877 sc-eQTL 2.08e-01 0.0405 0.032 0.421 Mono L1
ENSG00000213625 LEPROT 456804 sc-eQTL 8.74e-01 0.00911 0.0575 0.421 Mono L1
ENSG00000116678 LEPR 456739 sc-eQTL 6.64e-01 0.0377 0.0868 0.423 NK L1
ENSG00000162434 JAK1 809637 sc-eQTL 2.01e-02 0.0949 0.0405 0.423 NK L1
ENSG00000184588 PDE4B 84877 sc-eQTL 5.00e-01 -0.0378 0.0559 0.423 NK L1
ENSG00000213625 LEPROT 456804 sc-eQTL 7.54e-01 0.0293 0.0936 0.423 NK L1
ENSG00000162434 JAK1 809637 sc-eQTL 2.66e-01 0.0659 0.059 0.421 Other_T L1
ENSG00000184588 PDE4B 84877 sc-eQTL 3.84e-01 0.056 0.0642 0.421 Other_T L1
ENSG00000213625 LEPROT 456804 sc-eQTL 4.53e-01 0.0697 0.0928 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 809637 sc-eQTL 4.02e-01 0.0805 0.0958 0.444 B_Activated L2
ENSG00000184588 PDE4B 84877 sc-eQTL 8.14e-01 -0.018 0.0762 0.444 B_Activated L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.98e-01 -0.039 0.1 0.444 B_Activated L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.30e-01 0.118 0.0774 0.423 B_Intermediate L2
ENSG00000184588 PDE4B 84877 sc-eQTL 4.36e-01 0.0494 0.0633 0.423 B_Intermediate L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.41e-01 -0.0183 0.0913 0.423 B_Intermediate L2
ENSG00000162434 JAK1 809637 sc-eQTL 3.00e-01 0.0828 0.0797 0.422 B_Memory L2
ENSG00000184588 PDE4B 84877 sc-eQTL 2.31e-02 0.185 0.0807 0.422 B_Memory L2
ENSG00000213625 LEPROT 456804 sc-eQTL 4.08e-01 0.0769 0.0927 0.422 B_Memory L2
ENSG00000162434 JAK1 809637 sc-eQTL 3.45e-01 0.0661 0.0699 0.421 B_Naive1 L2
ENSG00000184588 PDE4B 84877 sc-eQTL 7.11e-02 0.122 0.067 0.421 B_Naive1 L2
ENSG00000213625 LEPROT 456804 sc-eQTL 5.54e-01 -0.0542 0.0913 0.421 B_Naive1 L2
ENSG00000162434 JAK1 809637 sc-eQTL 7.76e-01 -0.021 0.0737 0.423 B_Naive2 L2
ENSG00000184588 PDE4B 84877 sc-eQTL 1.39e-01 0.086 0.058 0.423 B_Naive2 L2
ENSG00000213625 LEPROT 456804 sc-eQTL 3.51e-01 0.0829 0.0887 0.423 B_Naive2 L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.71e-01 0.118 0.0858 0.418 CD4_CTL L2
ENSG00000184588 PDE4B 84877 sc-eQTL 7.24e-01 -0.027 0.0762 0.418 CD4_CTL L2
ENSG00000213625 LEPROT 456804 sc-eQTL 2.49e-01 0.114 0.0987 0.418 CD4_CTL L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.22e-01 0.0831 0.0535 0.421 CD4_Naive L2
ENSG00000184588 PDE4B 84877 sc-eQTL 5.55e-01 -0.0397 0.0673 0.421 CD4_Naive L2
ENSG00000213625 LEPROT 456804 sc-eQTL 1.92e-01 0.114 0.0869 0.421 CD4_Naive L2
ENSG00000162434 JAK1 809637 sc-eQTL 2.52e-01 0.0695 0.0605 0.421 CD4_TCM L2
ENSG00000184588 PDE4B 84877 sc-eQTL 6.04e-01 -0.0361 0.0694 0.421 CD4_TCM L2
ENSG00000213625 LEPROT 456804 sc-eQTL 7.00e-01 -0.034 0.0879 0.421 CD4_TCM L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.89e-01 0.103 0.0785 0.421 CD4_TEM L2
ENSG00000184588 PDE4B 84877 sc-eQTL 8.42e-01 0.0146 0.0728 0.421 CD4_TEM L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.33e-01 0.0447 0.0936 0.421 CD4_TEM L2
ENSG00000116678 LEPR 456739 sc-eQTL 1.95e-01 -0.113 0.087 0.421 CD8_CTL L2
ENSG00000162434 JAK1 809637 sc-eQTL 5.70e-02 0.139 0.0727 0.421 CD8_CTL L2
ENSG00000184588 PDE4B 84877 sc-eQTL 6.05e-01 0.0352 0.0678 0.421 CD8_CTL L2
ENSG00000213625 LEPROT 456804 sc-eQTL 3.33e-01 0.0867 0.0894 0.421 CD8_CTL L2
ENSG00000116678 LEPR 456739 sc-eQTL 5.81e-01 -0.0491 0.0889 0.421 CD8_Naive L2
ENSG00000162434 JAK1 809637 sc-eQTL 5.61e-02 0.141 0.0735 0.421 CD8_Naive L2
ENSG00000184588 PDE4B 84877 sc-eQTL 2.36e-01 -0.0738 0.0621 0.421 CD8_Naive L2
ENSG00000213625 LEPROT 456804 sc-eQTL 7.61e-01 0.0276 0.0908 0.421 CD8_Naive L2
ENSG00000116678 LEPR 456739 sc-eQTL 4.01e-01 0.077 0.0914 0.414 CD8_TCM L2
ENSG00000162434 JAK1 809637 sc-eQTL 3.90e-01 0.0684 0.0794 0.414 CD8_TCM L2
ENSG00000184588 PDE4B 84877 sc-eQTL 4.18e-01 -0.071 0.0874 0.414 CD8_TCM L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.51e-01 -0.0449 0.0992 0.414 CD8_TCM L2
ENSG00000116678 LEPR 456739 sc-eQTL 9.14e-01 0.00875 0.0805 0.418 CD8_TEM L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.35e-01 0.136 0.0905 0.418 CD8_TEM L2
ENSG00000184588 PDE4B 84877 sc-eQTL 3.17e-01 0.0775 0.0772 0.418 CD8_TEM L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.41e-01 -0.0189 0.0938 0.418 CD8_TEM L2
ENSG00000162434 JAK1 809637 sc-eQTL 9.87e-02 0.132 0.0797 0.42 MAIT L2
ENSG00000184588 PDE4B 84877 sc-eQTL 2.03e-01 0.0872 0.0684 0.42 MAIT L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.17e-01 0.0214 0.0924 0.42 MAIT L2
ENSG00000116678 LEPR 456739 sc-eQTL 7.17e-01 -0.0313 0.0864 0.424 NK_CD56bright L2
ENSG00000162434 JAK1 809637 sc-eQTL 2.67e-01 0.0656 0.059 0.424 NK_CD56bright L2
ENSG00000184588 PDE4B 84877 sc-eQTL 8.21e-01 -0.0161 0.071 0.424 NK_CD56bright L2
ENSG00000213625 LEPROT 456804 sc-eQTL 2.42e-01 0.114 0.0969 0.424 NK_CD56bright L2
ENSG00000116678 LEPR 456739 sc-eQTL 5.07e-01 0.061 0.0918 0.422 NK_CD56dim L2
ENSG00000162434 JAK1 809637 sc-eQTL 5.23e-02 0.0929 0.0476 0.422 NK_CD56dim L2
ENSG00000184588 PDE4B 84877 sc-eQTL 9.58e-01 0.00366 0.0701 0.422 NK_CD56dim L2
ENSG00000213625 LEPROT 456804 sc-eQTL 4.54e-01 -0.0727 0.097 0.422 NK_CD56dim L2
ENSG00000116678 LEPR 456739 sc-eQTL 6.26e-01 -0.0393 0.0804 0.42 NK_HLA L2
ENSG00000162434 JAK1 809637 sc-eQTL 5.46e-01 -0.0379 0.0626 0.42 NK_HLA L2
ENSG00000184588 PDE4B 84877 sc-eQTL 6.19e-01 -0.038 0.0762 0.42 NK_HLA L2
ENSG00000213625 LEPROT 456804 sc-eQTL 4.15e-01 -0.0792 0.097 0.42 NK_HLA L2
ENSG00000116678 LEPR 456739 sc-eQTL 5.13e-01 0.0571 0.0871 0.422 NK_cytokine L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.29e-01 0.077 0.0505 0.422 NK_cytokine L2
ENSG00000184588 PDE4B 84877 sc-eQTL 8.37e-01 -0.0164 0.0796 0.422 NK_cytokine L2
ENSG00000213625 LEPROT 456804 sc-eQTL 4.30e-02 0.186 0.0914 0.422 NK_cytokine L2
ENSG00000162434 JAK1 809637 sc-eQTL 9.28e-01 -0.00739 0.0814 0.478 PB L2
ENSG00000184588 PDE4B 84877 sc-eQTL 3.56e-01 0.0954 0.103 0.478 PB L2
ENSG00000213625 LEPROT 456804 sc-eQTL 2.12e-01 0.142 0.113 0.478 PB L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.86e-01 -0.0799 0.0602 0.42 Pro_T L2
ENSG00000184588 PDE4B 84877 sc-eQTL 5.06e-01 0.0494 0.0742 0.42 Pro_T L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.58e-01 0.0417 0.0941 0.42 Pro_T L2
ENSG00000162434 JAK1 809637 sc-eQTL 1.13e-02 0.187 0.073 0.421 Treg L2
ENSG00000184588 PDE4B 84877 sc-eQTL 7.59e-01 0.0208 0.0677 0.421 Treg L2
ENSG00000213625 LEPROT 456804 sc-eQTL 5.00e-01 0.065 0.0961 0.421 Treg L2
ENSG00000116678 LEPR 456739 sc-eQTL 5.62e-01 0.0526 0.0906 0.427 cDC L2
ENSG00000162433 AK4 729842 sc-eQTL 2.84e-01 0.0857 0.0798 0.427 cDC L2
ENSG00000162434 JAK1 809637 sc-eQTL 9.25e-02 0.125 0.0742 0.427 cDC L2
ENSG00000184588 PDE4B 84877 sc-eQTL 2.91e-01 0.0529 0.05 0.427 cDC L2
ENSG00000213625 LEPROT 456804 sc-eQTL 4.70e-01 0.0659 0.091 0.427 cDC L2
ENSG00000285079 AL513493.1 173429 sc-eQTL 2.34e-01 -0.0389 0.0326 0.427 cDC L2
ENSG00000116678 LEPR 456739 sc-eQTL 2.51e-01 0.103 0.0897 0.421 cMono_IL1B L2
ENSG00000162433 AK4 729842 sc-eQTL 9.95e-01 0.000478 0.0828 0.421 cMono_IL1B L2
ENSG00000162434 JAK1 809637 sc-eQTL 7.80e-02 0.132 0.0748 0.421 cMono_IL1B L2
ENSG00000184588 PDE4B 84877 sc-eQTL 6.22e-01 0.0206 0.0417 0.421 cMono_IL1B L2
ENSG00000213625 LEPROT 456804 sc-eQTL 1.14e-01 0.096 0.0605 0.421 cMono_IL1B L2
ENSG00000116678 LEPR 456739 sc-eQTL 6.08e-01 -0.0454 0.0885 0.421 cMono_S100A L2
ENSG00000162433 AK4 729842 sc-eQTL 9.87e-01 -0.00133 0.084 0.421 cMono_S100A L2
ENSG00000162434 JAK1 809637 sc-eQTL 6.24e-01 0.038 0.0775 0.421 cMono_S100A L2
ENSG00000184588 PDE4B 84877 sc-eQTL 4.93e-01 0.0301 0.0438 0.421 cMono_S100A L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.64e-01 0.0125 0.0725 0.421 cMono_S100A L2
ENSG00000162434 JAK1 809637 sc-eQTL 5.32e-01 0.0684 0.109 0.382 gdT L2
ENSG00000184588 PDE4B 84877 sc-eQTL 8.71e-01 0.0104 0.0637 0.382 gdT L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.36e-01 -0.0239 0.115 0.382 gdT L2
ENSG00000116678 LEPR 456739 sc-eQTL 5.07e-01 -0.0584 0.088 0.431 intMono L2
ENSG00000162433 AK4 729842 sc-eQTL 2.61e-01 -0.0932 0.0827 0.431 intMono L2
ENSG00000162434 JAK1 809637 sc-eQTL 9.44e-01 0.0054 0.0767 0.431 intMono L2
ENSG00000184588 PDE4B 84877 sc-eQTL 7.08e-01 0.0166 0.0443 0.431 intMono L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.57e-01 -0.0329 0.0739 0.431 intMono L2
ENSG00000116678 LEPR 456739 sc-eQTL 7.30e-01 -0.0297 0.0862 0.421 ncMono L2
ENSG00000162433 AK4 729842 sc-eQTL 4.66e-01 0.0561 0.0767 0.421 ncMono L2
ENSG00000162434 JAK1 809637 sc-eQTL 9.01e-01 -0.00774 0.0622 0.421 ncMono L2
ENSG00000184588 PDE4B 84877 sc-eQTL 7.41e-01 -0.0163 0.0494 0.421 ncMono L2
ENSG00000213625 LEPROT 456804 sc-eQTL 8.38e-01 -0.0181 0.0882 0.421 ncMono L2
ENSG00000116678 LEPR 456739 sc-eQTL 4.30e-01 -0.0716 0.0905 0.412 pDC L2
ENSG00000162433 AK4 729842 sc-eQTL 3.98e-01 -0.0499 0.059 0.412 pDC L2
ENSG00000162434 JAK1 809637 sc-eQTL 7.11e-01 -0.0292 0.0789 0.412 pDC L2
ENSG00000184588 PDE4B 84877 sc-eQTL 5.09e-01 0.0455 0.0688 0.412 pDC L2
ENSG00000213625 LEPROT 456804 sc-eQTL 6.15e-01 -0.0493 0.0978 0.412 pDC L2
ENSG00000285079 AL513493.1 173429 sc-eQTL 5.59e-01 -0.0432 0.0739 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 809637 sc-eQTL 1.15e-01 0.109 0.069 0.421 B_Memory LOneK1K
ENSG00000184588 PDE4B 84877 sc-eQTL 1.29e-01 0.0865 0.0567 0.421 B_Memory LOneK1K
ENSG00000213625 LEPROT 456804 sc-eQTL 8.86e-01 -0.0127 0.0891 0.421 B_Memory LOneK1K
ENSG00000162434 JAK1 809637 sc-eQTL 4.47e-01 0.0514 0.0675 0.421 B_Naive LOneK1K
ENSG00000184588 PDE4B 84877 sc-eQTL 4.23e-02 0.123 0.0601 0.421 B_Naive LOneK1K
ENSG00000213625 LEPROT 456804 sc-eQTL 8.14e-01 0.0201 0.0855 0.421 B_Naive LOneK1K
ENSG00000116678 LEPR 456739 sc-eQTL 6.62e-01 0.0386 0.0882 0.421 CD14_Mono LOneK1K
ENSG00000162433 AK4 729842 sc-eQTL 7.15e-01 -0.0309 0.0844 0.421 CD14_Mono LOneK1K
ENSG00000162434 JAK1 809637 sc-eQTL 1.43e-01 0.103 0.0703 0.421 CD14_Mono LOneK1K
ENSG00000184588 PDE4B 84877 sc-eQTL 8.19e-01 0.00828 0.036 0.421 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 456804 sc-eQTL 2.34e-01 0.0704 0.059 0.421 CD14_Mono LOneK1K
ENSG00000116678 LEPR 456739 sc-eQTL 8.77e-01 -0.0137 0.0884 0.422 CD16_Mono LOneK1K
ENSG00000162433 AK4 729842 sc-eQTL 8.75e-01 0.0126 0.0801 0.422 CD16_Mono LOneK1K
ENSG00000162434 JAK1 809637 sc-eQTL 9.96e-01 0.000296 0.0539 0.422 CD16_Mono LOneK1K
ENSG00000184588 PDE4B 84877 sc-eQTL 7.95e-01 -0.0107 0.0412 0.422 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 456804 sc-eQTL 3.93e-01 -0.0642 0.075 0.422 CD16_Mono LOneK1K
ENSG00000116678 LEPR 456739 sc-eQTL 4.90e-01 0.0614 0.0887 0.422 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 809637 sc-eQTL 1.96e-02 0.0967 0.0411 0.422 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B 84877 sc-eQTL 8.87e-01 -0.00918 0.0646 0.422 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 456804 sc-eQTL 6.60e-01 0.0406 0.0921 0.422 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116678 LEPR 456739 eQTL 0.00788 0.062 0.0233 0.0 0.0 0.425

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina