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Genes within 1Mb (chr1:65789351:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 721597 sc-eQTL 1.68e-01 0.0868 0.0627 0.739 B L1
ENSG00000184588 PDE4B -3163 sc-eQTL 2.34e-01 0.0783 0.0656 0.739 B L1
ENSG00000213625 LEPROT 368764 sc-eQTL 5.41e-01 0.0493 0.0804 0.739 B L1
ENSG00000162434 JAK1 721597 sc-eQTL 6.87e-02 0.109 0.0598 0.739 CD4T L1
ENSG00000184588 PDE4B -3163 sc-eQTL 4.74e-01 0.0515 0.0718 0.739 CD4T L1
ENSG00000213625 LEPROT 368764 sc-eQTL 3.92e-01 0.0807 0.0941 0.739 CD4T L1
ENSG00000116678 LEPR 368699 sc-eQTL 9.56e-01 0.00573 0.103 0.739 CD8T L1
ENSG00000162434 JAK1 721597 sc-eQTL 5.62e-01 0.0462 0.0795 0.739 CD8T L1
ENSG00000184588 PDE4B -3163 sc-eQTL 7.96e-01 0.0176 0.0679 0.739 CD8T L1
ENSG00000213625 LEPROT 368764 sc-eQTL 4.55e-01 0.0788 0.105 0.739 CD8T L1
ENSG00000116678 LEPR 368699 sc-eQTL 6.39e-01 0.048 0.102 0.732 DC L1
ENSG00000162433 AK4 641802 sc-eQTL 5.14e-01 -0.0561 0.0859 0.732 DC L1
ENSG00000162434 JAK1 721597 sc-eQTL 2.47e-01 -0.0828 0.0713 0.732 DC L1
ENSG00000184588 PDE4B -3163 sc-eQTL 6.45e-01 0.0256 0.0554 0.732 DC L1
ENSG00000213625 LEPROT 368764 sc-eQTL 8.40e-02 0.175 0.101 0.732 DC L1
ENSG00000285079 AL513493.1 85389 sc-eQTL 5.55e-01 0.0323 0.0546 0.732 DC L1
ENSG00000116678 LEPR 368699 sc-eQTL 2.30e-01 0.12 0.0995 0.739 Mono L1
ENSG00000162433 AK4 641802 sc-eQTL 6.78e-01 0.038 0.0914 0.739 Mono L1
ENSG00000162434 JAK1 721597 sc-eQTL 3.98e-02 0.133 0.0645 0.739 Mono L1
ENSG00000184588 PDE4B -3163 sc-eQTL 4.20e-01 0.0291 0.036 0.739 Mono L1
ENSG00000213625 LEPROT 368764 sc-eQTL 8.30e-02 0.112 0.0641 0.739 Mono L1
ENSG00000116678 LEPR 368699 sc-eQTL 2.52e-01 -0.111 0.0967 0.74 NK L1
ENSG00000162434 JAK1 721597 sc-eQTL 7.30e-02 0.0819 0.0455 0.74 NK L1
ENSG00000184588 PDE4B -3163 sc-eQTL 1.26e-01 -0.0955 0.0622 0.74 NK L1
ENSG00000213625 LEPROT 368764 sc-eQTL 1.66e-01 0.145 0.104 0.74 NK L1
ENSG00000162434 JAK1 721597 sc-eQTL 3.79e-01 0.0585 0.0664 0.739 Other_T L1
ENSG00000184588 PDE4B -3163 sc-eQTL 6.70e-01 -0.0309 0.0723 0.739 Other_T L1
ENSG00000213625 LEPROT 368764 sc-eQTL 8.61e-01 -0.0183 0.104 0.739 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 721597 sc-eQTL 3.85e-01 0.0954 0.109 0.753 B_Activated L2
ENSG00000184588 PDE4B -3163 sc-eQTL 2.97e-01 0.0908 0.0868 0.753 B_Activated L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.05e-01 0.0955 0.114 0.753 B_Activated L2
ENSG00000162434 JAK1 721597 sc-eQTL 9.35e-01 -0.00708 0.0866 0.74 B_Intermediate L2
ENSG00000184588 PDE4B -3163 sc-eQTL 9.19e-01 -0.00721 0.0706 0.74 B_Intermediate L2
ENSG00000213625 LEPROT 368764 sc-eQTL 1.92e-01 0.132 0.101 0.74 B_Intermediate L2
ENSG00000162434 JAK1 721597 sc-eQTL 3.59e-01 0.0813 0.0885 0.737 B_Memory L2
ENSG00000184588 PDE4B -3163 sc-eQTL 9.86e-01 0.00154 0.0906 0.737 B_Memory L2
ENSG00000213625 LEPROT 368764 sc-eQTL 3.24e-01 -0.102 0.103 0.737 B_Memory L2
ENSG00000162434 JAK1 721597 sc-eQTL 8.41e-01 0.0161 0.0799 0.739 B_Naive1 L2
ENSG00000184588 PDE4B -3163 sc-eQTL 9.54e-01 0.00445 0.0771 0.739 B_Naive1 L2
ENSG00000213625 LEPROT 368764 sc-eQTL 7.20e-01 0.0374 0.104 0.739 B_Naive1 L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.58e-01 0.116 0.0819 0.738 B_Naive2 L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.11e-01 -0.0428 0.065 0.738 B_Naive2 L2
ENSG00000213625 LEPROT 368764 sc-eQTL 1.63e-01 0.138 0.0988 0.738 B_Naive2 L2
ENSG00000162434 JAK1 721597 sc-eQTL 9.17e-02 0.161 0.095 0.743 CD4_CTL L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.84e-01 0.0464 0.0846 0.743 CD4_CTL L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.00e-01 -0.0927 0.11 0.743 CD4_CTL L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.38e-01 0.0869 0.0583 0.739 CD4_Naive L2
ENSG00000184588 PDE4B -3163 sc-eQTL 9.05e-01 0.00874 0.0734 0.739 CD4_Naive L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.82e-01 0.067 0.095 0.739 CD4_Naive L2
ENSG00000162434 JAK1 721597 sc-eQTL 5.01e-01 0.0453 0.0673 0.739 CD4_TCM L2
ENSG00000184588 PDE4B -3163 sc-eQTL 7.12e-01 0.0285 0.0771 0.739 CD4_TCM L2
ENSG00000213625 LEPROT 368764 sc-eQTL 6.21e-01 0.0483 0.0976 0.739 CD4_TCM L2
ENSG00000162434 JAK1 721597 sc-eQTL 2.01e-01 0.113 0.0885 0.739 CD4_TEM L2
ENSG00000184588 PDE4B -3163 sc-eQTL 7.43e-01 -0.0269 0.0821 0.739 CD4_TEM L2
ENSG00000213625 LEPROT 368764 sc-eQTL 9.43e-01 -0.00757 0.105 0.739 CD4_TEM L2
ENSG00000116678 LEPR 368699 sc-eQTL 8.86e-01 -0.0144 0.1 0.739 CD8_CTL L2
ENSG00000162434 JAK1 721597 sc-eQTL 2.00e-01 0.108 0.0837 0.739 CD8_CTL L2
ENSG00000184588 PDE4B -3163 sc-eQTL 7.98e-01 -0.0199 0.0777 0.739 CD8_CTL L2
ENSG00000213625 LEPROT 368764 sc-eQTL 2.86e-01 0.11 0.102 0.739 CD8_CTL L2
ENSG00000116678 LEPR 368699 sc-eQTL 7.96e-01 0.0253 0.0978 0.739 CD8_Naive L2
ENSG00000162434 JAK1 721597 sc-eQTL 3.04e-01 0.0838 0.0813 0.739 CD8_Naive L2
ENSG00000184588 PDE4B -3163 sc-eQTL 4.82e-01 0.0482 0.0685 0.739 CD8_Naive L2
ENSG00000213625 LEPROT 368764 sc-eQTL 2.57e-01 0.113 0.0996 0.739 CD8_Naive L2
ENSG00000116678 LEPR 368699 sc-eQTL 1.31e-01 0.15 0.0993 0.731 CD8_TCM L2
ENSG00000162434 JAK1 721597 sc-eQTL 4.34e-01 0.0679 0.0866 0.731 CD8_TCM L2
ENSG00000184588 PDE4B -3163 sc-eQTL 8.82e-01 -0.0142 0.0954 0.731 CD8_TCM L2
ENSG00000213625 LEPROT 368764 sc-eQTL 5.69e-01 0.0617 0.108 0.731 CD8_TCM L2
ENSG00000116678 LEPR 368699 sc-eQTL 3.70e-01 -0.0828 0.0922 0.744 CD8_TEM L2
ENSG00000162434 JAK1 721597 sc-eQTL 5.78e-01 0.0582 0.104 0.744 CD8_TEM L2
ENSG00000184588 PDE4B -3163 sc-eQTL 1.80e-01 -0.119 0.0885 0.744 CD8_TEM L2
ENSG00000213625 LEPROT 368764 sc-eQTL 7.83e-01 -0.0298 0.108 0.744 CD8_TEM L2
ENSG00000162434 JAK1 721597 sc-eQTL 5.71e-01 0.052 0.0917 0.742 MAIT L2
ENSG00000184588 PDE4B -3163 sc-eQTL 3.11e-01 0.0794 0.0783 0.742 MAIT L2
ENSG00000213625 LEPROT 368764 sc-eQTL 7.65e-01 -0.0317 0.106 0.742 MAIT L2
ENSG00000116678 LEPR 368699 sc-eQTL 3.64e-01 0.086 0.0946 0.74 NK_CD56bright L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.22e-01 0.1 0.0645 0.74 NK_CD56bright L2
ENSG00000184588 PDE4B -3163 sc-eQTL 6.73e-01 -0.033 0.0779 0.74 NK_CD56bright L2
ENSG00000213625 LEPROT 368764 sc-eQTL 7.14e-01 0.0391 0.107 0.74 NK_CD56bright L2
ENSG00000116678 LEPR 368699 sc-eQTL 4.68e-02 -0.202 0.101 0.741 NK_CD56dim L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.10e-01 0.0851 0.0529 0.741 NK_CD56dim L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.27e-01 -0.0492 0.0777 0.741 NK_CD56dim L2
ENSG00000213625 LEPROT 368764 sc-eQTL 2.55e-01 0.123 0.107 0.741 NK_CD56dim L2
ENSG00000116678 LEPR 368699 sc-eQTL 3.70e-01 0.0801 0.0891 0.74 NK_HLA L2
ENSG00000162434 JAK1 721597 sc-eQTL 5.72e-01 -0.0394 0.0695 0.74 NK_HLA L2
ENSG00000184588 PDE4B -3163 sc-eQTL 6.76e-02 -0.154 0.0839 0.74 NK_HLA L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.51e-01 -0.0813 0.108 0.74 NK_HLA L2
ENSG00000116678 LEPR 368699 sc-eQTL 8.08e-01 0.0238 0.0976 0.741 NK_cytokine L2
ENSG00000162434 JAK1 721597 sc-eQTL 3.57e-02 0.119 0.0562 0.741 NK_cytokine L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.64e-02 -0.169 0.0883 0.741 NK_cytokine L2
ENSG00000213625 LEPROT 368764 sc-eQTL 1.21e-01 0.16 0.103 0.741 NK_cytokine L2
ENSG00000162434 JAK1 721597 sc-eQTL 6.41e-01 0.0465 0.0995 0.767 PB L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.86e-01 -0.069 0.126 0.767 PB L2
ENSG00000213625 LEPROT 368764 sc-eQTL 7.96e-01 -0.0361 0.139 0.767 PB L2
ENSG00000162434 JAK1 721597 sc-eQTL 8.16e-01 0.0158 0.0675 0.737 Pro_T L2
ENSG00000184588 PDE4B -3163 sc-eQTL 9.02e-01 -0.0103 0.0828 0.737 Pro_T L2
ENSG00000213625 LEPROT 368764 sc-eQTL 9.15e-01 0.0112 0.105 0.737 Pro_T L2
ENSG00000162434 JAK1 721597 sc-eQTL 3.85e-01 0.0726 0.0835 0.739 Treg L2
ENSG00000184588 PDE4B -3163 sc-eQTL 8.22e-01 0.0172 0.0763 0.739 Treg L2
ENSG00000213625 LEPROT 368764 sc-eQTL 8.09e-01 0.0263 0.108 0.739 Treg L2
ENSG00000116678 LEPR 368699 sc-eQTL 9.13e-01 0.0118 0.107 0.739 cDC L2
ENSG00000162433 AK4 641802 sc-eQTL 1.40e-01 -0.14 0.0943 0.739 cDC L2
ENSG00000162434 JAK1 721597 sc-eQTL 4.01e-01 0.0743 0.0884 0.739 cDC L2
ENSG00000184588 PDE4B -3163 sc-eQTL 4.36e-01 -0.0464 0.0594 0.739 cDC L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.98e-01 0.0732 0.108 0.739 cDC L2
ENSG00000285079 AL513493.1 85389 sc-eQTL 5.19e-01 -0.025 0.0387 0.739 cDC L2
ENSG00000116678 LEPR 368699 sc-eQTL 1.92e-01 0.134 0.102 0.739 cMono_IL1B L2
ENSG00000162433 AK4 641802 sc-eQTL 9.61e-01 -0.00465 0.0945 0.739 cMono_IL1B L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.50e-01 0.124 0.0855 0.739 cMono_IL1B L2
ENSG00000184588 PDE4B -3163 sc-eQTL 3.22e-01 0.0472 0.0475 0.739 cMono_IL1B L2
ENSG00000213625 LEPROT 368764 sc-eQTL 3.74e-01 0.0617 0.0693 0.739 cMono_IL1B L2
ENSG00000116678 LEPR 368699 sc-eQTL 6.20e-01 -0.0503 0.101 0.739 cMono_S100A L2
ENSG00000162433 AK4 641802 sc-eQTL 5.66e-01 0.0552 0.0961 0.739 cMono_S100A L2
ENSG00000162434 JAK1 721597 sc-eQTL 1.09e-01 0.142 0.0882 0.739 cMono_S100A L2
ENSG00000184588 PDE4B -3163 sc-eQTL 3.62e-01 0.0458 0.0501 0.739 cMono_S100A L2
ENSG00000213625 LEPROT 368764 sc-eQTL 1.53e-02 0.2 0.0819 0.739 cMono_S100A L2
ENSG00000162434 JAK1 721597 sc-eQTL 5.84e-01 -0.0653 0.119 0.736 gdT L2
ENSG00000184588 PDE4B -3163 sc-eQTL 6.93e-03 -0.185 0.0676 0.736 gdT L2
ENSG00000213625 LEPROT 368764 sc-eQTL 4.41e-01 -0.0968 0.125 0.736 gdT L2
ENSG00000116678 LEPR 368699 sc-eQTL 2.31e-01 0.118 0.0984 0.74 intMono L2
ENSG00000162433 AK4 641802 sc-eQTL 9.94e-02 -0.153 0.0924 0.74 intMono L2
ENSG00000162434 JAK1 721597 sc-eQTL 9.21e-02 0.145 0.0854 0.74 intMono L2
ENSG00000184588 PDE4B -3163 sc-eQTL 4.92e-01 0.0342 0.0496 0.74 intMono L2
ENSG00000213625 LEPROT 368764 sc-eQTL 3.84e-01 0.0722 0.0827 0.74 intMono L2
ENSG00000116678 LEPR 368699 sc-eQTL 5.54e-01 0.0569 0.0959 0.738 ncMono L2
ENSG00000162433 AK4 641802 sc-eQTL 8.56e-01 0.0156 0.0856 0.738 ncMono L2
ENSG00000162434 JAK1 721597 sc-eQTL 9.98e-01 0.000154 0.0692 0.738 ncMono L2
ENSG00000184588 PDE4B -3163 sc-eQTL 5.85e-01 -0.03 0.055 0.738 ncMono L2
ENSG00000213625 LEPROT 368764 sc-eQTL 6.29e-01 -0.0475 0.0982 0.738 ncMono L2
ENSG00000116678 LEPR 368699 sc-eQTL 5.96e-01 0.0554 0.104 0.726 pDC L2
ENSG00000162433 AK4 641802 sc-eQTL 6.36e-01 0.0322 0.0679 0.726 pDC L2
ENSG00000162434 JAK1 721597 sc-eQTL 7.70e-02 -0.16 0.0899 0.726 pDC L2
ENSG00000184588 PDE4B -3163 sc-eQTL 7.75e-01 0.0227 0.0792 0.726 pDC L2
ENSG00000213625 LEPROT 368764 sc-eQTL 9.34e-02 0.188 0.112 0.726 pDC L2
ENSG00000285079 AL513493.1 85389 sc-eQTL 6.30e-01 0.0411 0.085 0.726 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 721597 sc-eQTL 5.38e-01 0.0479 0.0777 0.739 B_Memory LOneK1K
ENSG00000184588 PDE4B -3163 sc-eQTL 7.41e-01 0.0212 0.0639 0.739 B_Memory LOneK1K
ENSG00000213625 LEPROT 368764 sc-eQTL 9.25e-01 -0.00938 0.0999 0.739 B_Memory LOneK1K
ENSG00000162434 JAK1 721597 sc-eQTL 2.13e-01 0.0955 0.0765 0.739 B_Naive LOneK1K
ENSG00000184588 PDE4B -3163 sc-eQTL 9.01e-01 -0.00858 0.0689 0.739 B_Naive LOneK1K
ENSG00000213625 LEPROT 368764 sc-eQTL 3.74e-01 0.0863 0.0968 0.739 B_Naive LOneK1K
ENSG00000116678 LEPR 368699 sc-eQTL 3.85e-01 0.0862 0.099 0.739 CD14_Mono LOneK1K
ENSG00000162433 AK4 641802 sc-eQTL 5.90e-01 0.0512 0.0949 0.739 CD14_Mono LOneK1K
ENSG00000162434 JAK1 721597 sc-eQTL 4.84e-02 0.156 0.0787 0.739 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -3163 sc-eQTL 2.12e-01 0.0506 0.0404 0.739 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 368764 sc-eQTL 2.06e-02 0.153 0.0657 0.739 CD14_Mono LOneK1K
ENSG00000116678 LEPR 368699 sc-eQTL 2.34e-01 0.118 0.0992 0.739 CD16_Mono LOneK1K
ENSG00000162433 AK4 641802 sc-eQTL 2.43e-01 -0.105 0.0898 0.739 CD16_Mono LOneK1K
ENSG00000162434 JAK1 721597 sc-eQTL 3.49e-01 0.0568 0.0605 0.739 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -3163 sc-eQTL 9.19e-01 -0.00471 0.0463 0.739 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 368764 sc-eQTL 6.25e-01 -0.0413 0.0845 0.739 CD16_Mono LOneK1K
ENSG00000116678 LEPR 368699 sc-eQTL 1.14e-01 -0.157 0.0991 0.741 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 721597 sc-eQTL 5.78e-02 0.0884 0.0463 0.741 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -3163 sc-eQTL 1.33e-01 -0.109 0.0721 0.741 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 368764 sc-eQTL 1.52e-01 0.148 0.103 0.741 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116675 DNAJC6 541132 pQTL 0.0288 -0.0317 0.0145 0.0 0.0 0.275
ENSG00000213625 LEPROT 368764 eQTL 0.024 0.048 0.0212 0.0 0.0 0.281

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina