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Genes within 1Mb (chr1:65786292:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 718538 sc-eQTL 2.16e-01 0.0696 0.0561 0.38 B L1
ENSG00000184588 PDE4B -6222 sc-eQTL 4.69e-01 0.0426 0.0587 0.38 B L1
ENSG00000213625 LEPROT 365705 sc-eQTL 9.40e-01 0.00541 0.0719 0.38 B L1
ENSG00000162434 JAK1 718538 sc-eQTL 7.42e-01 0.018 0.0545 0.38 CD4T L1
ENSG00000184588 PDE4B -6222 sc-eQTL 4.55e-01 -0.0487 0.065 0.38 CD4T L1
ENSG00000213625 LEPROT 365705 sc-eQTL 6.64e-01 0.0371 0.0853 0.38 CD4T L1
ENSG00000116678 LEPR 365640 sc-eQTL 1.73e-01 -0.126 0.0921 0.38 CD8T L1
ENSG00000162434 JAK1 718538 sc-eQTL 1.56e-01 0.102 0.0714 0.38 CD8T L1
ENSG00000184588 PDE4B -6222 sc-eQTL 7.12e-01 -0.0226 0.0612 0.38 CD8T L1
ENSG00000213625 LEPROT 365705 sc-eQTL 1.60e-01 0.134 0.0946 0.38 CD8T L1
ENSG00000116678 LEPR 365640 sc-eQTL 8.74e-01 0.0147 0.0922 0.387 DC L1
ENSG00000162433 AK4 638743 sc-eQTL 9.84e-01 0.00159 0.0775 0.387 DC L1
ENSG00000162434 JAK1 718538 sc-eQTL 1.04e-01 0.104 0.064 0.387 DC L1
ENSG00000184588 PDE4B -6222 sc-eQTL 6.03e-01 -0.026 0.0499 0.387 DC L1
ENSG00000213625 LEPROT 365705 sc-eQTL 5.72e-01 0.0516 0.0913 0.387 DC L1
ENSG00000285079 AL513493.1 82330 sc-eQTL 6.60e-01 -0.0217 0.0492 0.387 DC L1
ENSG00000116678 LEPR 365640 sc-eQTL 6.52e-01 0.0409 0.0908 0.38 Mono L1
ENSG00000162433 AK4 638743 sc-eQTL 7.00e-01 0.032 0.0831 0.38 Mono L1
ENSG00000162434 JAK1 718538 sc-eQTL 2.02e-01 0.0756 0.059 0.38 Mono L1
ENSG00000184588 PDE4B -6222 sc-eQTL 9.03e-01 0.00402 0.0328 0.38 Mono L1
ENSG00000213625 LEPROT 365705 sc-eQTL 7.61e-01 0.0179 0.0587 0.38 Mono L1
ENSG00000116678 LEPR 365640 sc-eQTL 2.15e-01 0.111 0.0891 0.382 NK L1
ENSG00000162434 JAK1 718538 sc-eQTL 8.64e-01 0.00725 0.0422 0.382 NK L1
ENSG00000184588 PDE4B -6222 sc-eQTL 9.07e-01 -0.00672 0.0576 0.382 NK L1
ENSG00000213625 LEPROT 365705 sc-eQTL 6.58e-01 0.0427 0.0963 0.382 NK L1
ENSG00000162434 JAK1 718538 sc-eQTL 5.08e-01 0.0401 0.0604 0.38 Other_T L1
ENSG00000184588 PDE4B -6222 sc-eQTL 3.97e-01 -0.0556 0.0656 0.38 Other_T L1
ENSG00000213625 LEPROT 365705 sc-eQTL 3.26e-01 -0.0932 0.0947 0.38 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 718538 sc-eQTL 5.64e-01 0.0579 0.1 0.367 B_Activated L2
ENSG00000184588 PDE4B -6222 sc-eQTL 3.21e-01 0.079 0.0794 0.367 B_Activated L2
ENSG00000213625 LEPROT 365705 sc-eQTL 4.16e-01 0.0853 0.105 0.367 B_Activated L2
ENSG00000162434 JAK1 718538 sc-eQTL 5.20e-02 0.157 0.0802 0.378 B_Intermediate L2
ENSG00000184588 PDE4B -6222 sc-eQTL 2.98e-01 0.0685 0.0657 0.378 B_Intermediate L2
ENSG00000213625 LEPROT 365705 sc-eQTL 5.62e-01 0.0551 0.0948 0.378 B_Intermediate L2
ENSG00000162434 JAK1 718538 sc-eQTL 1.78e-01 0.109 0.0804 0.384 B_Memory L2
ENSG00000184588 PDE4B -6222 sc-eQTL 9.66e-02 0.137 0.0819 0.384 B_Memory L2
ENSG00000213625 LEPROT 365705 sc-eQTL 6.31e-01 0.0451 0.0938 0.384 B_Memory L2
ENSG00000162434 JAK1 718538 sc-eQTL 3.58e-01 0.0672 0.073 0.38 B_Naive1 L2
ENSG00000184588 PDE4B -6222 sc-eQTL 6.77e-01 0.0294 0.0705 0.38 B_Naive1 L2
ENSG00000213625 LEPROT 365705 sc-eQTL 4.23e-01 -0.0765 0.0953 0.38 B_Naive1 L2
ENSG00000162434 JAK1 718538 sc-eQTL 9.71e-01 0.00278 0.0768 0.382 B_Naive2 L2
ENSG00000184588 PDE4B -6222 sc-eQTL 1.51e-02 0.147 0.0598 0.382 B_Naive2 L2
ENSG00000213625 LEPROT 365705 sc-eQTL 5.38e-01 0.057 0.0925 0.382 B_Naive2 L2
ENSG00000162434 JAK1 718538 sc-eQTL 2.90e-01 0.0925 0.0872 0.375 CD4_CTL L2
ENSG00000184588 PDE4B -6222 sc-eQTL 7.55e-01 -0.0242 0.0773 0.375 CD4_CTL L2
ENSG00000213625 LEPROT 365705 sc-eQTL 3.30e-01 0.0977 0.1 0.375 CD4_CTL L2
ENSG00000162434 JAK1 718538 sc-eQTL 7.55e-01 -0.0165 0.053 0.38 CD4_Naive L2
ENSG00000184588 PDE4B -6222 sc-eQTL 5.72e-01 -0.0375 0.0663 0.38 CD4_Naive L2
ENSG00000213625 LEPROT 365705 sc-eQTL 8.23e-01 0.0193 0.086 0.38 CD4_Naive L2
ENSG00000162434 JAK1 718538 sc-eQTL 3.64e-01 0.0551 0.0606 0.38 CD4_TCM L2
ENSG00000184588 PDE4B -6222 sc-eQTL 1.00e+00 -3.19e-05 0.0695 0.38 CD4_TCM L2
ENSG00000213625 LEPROT 365705 sc-eQTL 9.64e-01 -0.00401 0.088 0.38 CD4_TCM L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.17e-01 0.0662 0.0814 0.38 CD4_TEM L2
ENSG00000184588 PDE4B -6222 sc-eQTL 3.37e-01 0.0722 0.0751 0.38 CD4_TEM L2
ENSG00000213625 LEPROT 365705 sc-eQTL 3.69e-01 0.0869 0.0966 0.38 CD4_TEM L2
ENSG00000116678 LEPR 365640 sc-eQTL 1.43e-01 -0.134 0.0908 0.38 CD8_CTL L2
ENSG00000162434 JAK1 718538 sc-eQTL 3.56e-01 0.0708 0.0765 0.38 CD8_CTL L2
ENSG00000184588 PDE4B -6222 sc-eQTL 9.03e-01 0.00862 0.0709 0.38 CD8_CTL L2
ENSG00000213625 LEPROT 365705 sc-eQTL 7.83e-01 -0.0258 0.0936 0.38 CD8_CTL L2
ENSG00000116678 LEPR 365640 sc-eQTL 1.77e-01 -0.122 0.0897 0.38 CD8_Naive L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.58e-01 0.0558 0.075 0.38 CD8_Naive L2
ENSG00000184588 PDE4B -6222 sc-eQTL 6.86e-01 -0.0256 0.0631 0.38 CD8_Naive L2
ENSG00000213625 LEPROT 365705 sc-eQTL 2.64e-01 0.103 0.0918 0.38 CD8_Naive L2
ENSG00000116678 LEPR 365640 sc-eQTL 8.51e-01 0.0173 0.0917 0.384 CD8_TCM L2
ENSG00000162434 JAK1 718538 sc-eQTL 1.47e-01 0.115 0.0793 0.384 CD8_TCM L2
ENSG00000184588 PDE4B -6222 sc-eQTL 3.37e-01 0.0841 0.0875 0.384 CD8_TCM L2
ENSG00000213625 LEPROT 365705 sc-eQTL 2.62e-01 -0.111 0.0991 0.384 CD8_TCM L2
ENSG00000116678 LEPR 365640 sc-eQTL 8.25e-01 0.0188 0.0852 0.379 CD8_TEM L2
ENSG00000162434 JAK1 718538 sc-eQTL 2.40e-01 0.113 0.0961 0.379 CD8_TEM L2
ENSG00000184588 PDE4B -6222 sc-eQTL 4.90e-01 -0.0566 0.0819 0.379 CD8_TEM L2
ENSG00000213625 LEPROT 365705 sc-eQTL 7.75e-02 0.175 0.0986 0.379 CD8_TEM L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.12e-01 0.0686 0.0835 0.383 MAIT L2
ENSG00000184588 PDE4B -6222 sc-eQTL 1.13e-02 -0.18 0.0704 0.383 MAIT L2
ENSG00000213625 LEPROT 365705 sc-eQTL 2.20e-02 -0.219 0.0951 0.383 MAIT L2
ENSG00000116678 LEPR 365640 sc-eQTL 3.33e-01 -0.0882 0.0909 0.387 NK_CD56bright L2
ENSG00000162434 JAK1 718538 sc-eQTL 9.00e-01 0.00785 0.0624 0.387 NK_CD56bright L2
ENSG00000184588 PDE4B -6222 sc-eQTL 9.77e-01 0.00216 0.0749 0.387 NK_CD56bright L2
ENSG00000213625 LEPROT 365705 sc-eQTL 2.12e-01 0.128 0.102 0.387 NK_CD56bright L2
ENSG00000116678 LEPR 365640 sc-eQTL 3.18e-01 0.0936 0.0935 0.379 NK_CD56dim L2
ENSG00000162434 JAK1 718538 sc-eQTL 5.79e-01 0.0272 0.0489 0.379 NK_CD56dim L2
ENSG00000184588 PDE4B -6222 sc-eQTL 9.95e-01 -0.000408 0.0715 0.379 NK_CD56dim L2
ENSG00000213625 LEPROT 365705 sc-eQTL 9.99e-01 -9.92e-05 0.0991 0.379 NK_CD56dim L2
ENSG00000116678 LEPR 365640 sc-eQTL 7.44e-01 -0.0277 0.0847 0.372 NK_HLA L2
ENSG00000162434 JAK1 718538 sc-eQTL 2.67e-01 0.0732 0.0658 0.372 NK_HLA L2
ENSG00000184588 PDE4B -6222 sc-eQTL 2.85e-01 -0.0859 0.0801 0.372 NK_HLA L2
ENSG00000213625 LEPROT 365705 sc-eQTL 7.72e-01 0.0296 0.102 0.372 NK_HLA L2
ENSG00000116678 LEPR 365640 sc-eQTL 3.39e-01 0.088 0.0918 0.379 NK_cytokine L2
ENSG00000162434 JAK1 718538 sc-eQTL 7.86e-01 -0.0146 0.0535 0.379 NK_cytokine L2
ENSG00000184588 PDE4B -6222 sc-eQTL 2.78e-01 0.0911 0.0837 0.379 NK_cytokine L2
ENSG00000213625 LEPROT 365705 sc-eQTL 1.51e-01 0.14 0.0969 0.379 NK_cytokine L2
ENSG00000162434 JAK1 718538 sc-eQTL 7.15e-01 -0.0316 0.0863 0.393 PB L2
ENSG00000184588 PDE4B -6222 sc-eQTL 7.92e-01 -0.029 0.11 0.393 PB L2
ENSG00000213625 LEPROT 365705 sc-eQTL 6.25e-01 -0.0592 0.121 0.393 PB L2
ENSG00000162434 JAK1 718538 sc-eQTL 8.32e-01 -0.0132 0.062 0.376 Pro_T L2
ENSG00000184588 PDE4B -6222 sc-eQTL 2.30e-01 0.0913 0.0758 0.376 Pro_T L2
ENSG00000213625 LEPROT 365705 sc-eQTL 6.63e-01 0.0421 0.0965 0.376 Pro_T L2
ENSG00000162434 JAK1 718538 sc-eQTL 2.27e-01 0.0934 0.0771 0.38 Treg L2
ENSG00000184588 PDE4B -6222 sc-eQTL 4.31e-01 -0.0555 0.0705 0.38 Treg L2
ENSG00000213625 LEPROT 365705 sc-eQTL 9.67e-01 0.00419 0.1 0.38 Treg L2
ENSG00000116678 LEPR 365640 sc-eQTL 7.13e-01 0.035 0.0949 0.39 cDC L2
ENSG00000162433 AK4 638743 sc-eQTL 7.33e-01 0.0286 0.0838 0.39 cDC L2
ENSG00000162434 JAK1 718538 sc-eQTL 2.31e-01 0.0938 0.0779 0.39 cDC L2
ENSG00000184588 PDE4B -6222 sc-eQTL 9.68e-01 -0.0021 0.0525 0.39 cDC L2
ENSG00000213625 LEPROT 365705 sc-eQTL 9.43e-01 -0.0068 0.0954 0.39 cDC L2
ENSG00000285079 AL513493.1 82330 sc-eQTL 8.25e-01 -0.00759 0.0343 0.39 cDC L2
ENSG00000116678 LEPR 365640 sc-eQTL 6.97e-01 -0.0357 0.0915 0.38 cMono_IL1B L2
ENSG00000162433 AK4 638743 sc-eQTL 4.35e-01 0.0658 0.0842 0.38 cMono_IL1B L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.52e-02 0.153 0.0759 0.38 cMono_IL1B L2
ENSG00000184588 PDE4B -6222 sc-eQTL 4.76e-01 -0.0303 0.0424 0.38 cMono_IL1B L2
ENSG00000213625 LEPROT 365705 sc-eQTL 6.71e-01 -0.0263 0.0619 0.38 cMono_IL1B L2
ENSG00000116678 LEPR 365640 sc-eQTL 3.66e-01 0.0816 0.09 0.38 cMono_S100A L2
ENSG00000162433 AK4 638743 sc-eQTL 8.88e-01 0.0121 0.0855 0.38 cMono_S100A L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.47e-01 0.06 0.0788 0.38 cMono_S100A L2
ENSG00000184588 PDE4B -6222 sc-eQTL 1.52e-01 -0.0638 0.0444 0.38 cMono_S100A L2
ENSG00000213625 LEPROT 365705 sc-eQTL 3.67e-01 0.0666 0.0737 0.38 cMono_S100A L2
ENSG00000162434 JAK1 718538 sc-eQTL 4.70e-01 0.0811 0.112 0.397 gdT L2
ENSG00000184588 PDE4B -6222 sc-eQTL 1.46e-01 0.0948 0.0649 0.397 gdT L2
ENSG00000213625 LEPROT 365705 sc-eQTL 8.37e-01 0.0244 0.118 0.397 gdT L2
ENSG00000116678 LEPR 365640 sc-eQTL 3.06e-01 -0.0906 0.0883 0.384 intMono L2
ENSG00000162433 AK4 638743 sc-eQTL 2.30e-01 0.1 0.0831 0.384 intMono L2
ENSG00000162434 JAK1 718538 sc-eQTL 5.96e-01 -0.0409 0.077 0.384 intMono L2
ENSG00000184588 PDE4B -6222 sc-eQTL 6.68e-01 -0.0191 0.0445 0.384 intMono L2
ENSG00000213625 LEPROT 365705 sc-eQTL 4.83e-01 0.0522 0.0742 0.384 intMono L2
ENSG00000116678 LEPR 365640 sc-eQTL 6.34e-01 0.043 0.0901 0.371 ncMono L2
ENSG00000162433 AK4 638743 sc-eQTL 5.44e-01 0.0488 0.0803 0.371 ncMono L2
ENSG00000162434 JAK1 718538 sc-eQTL 1.51e-01 0.0932 0.0647 0.371 ncMono L2
ENSG00000184588 PDE4B -6222 sc-eQTL 6.08e-01 -0.0265 0.0516 0.371 ncMono L2
ENSG00000213625 LEPROT 365705 sc-eQTL 2.15e-01 0.114 0.0919 0.371 ncMono L2
ENSG00000116678 LEPR 365640 sc-eQTL 6.99e-01 -0.0371 0.096 0.387 pDC L2
ENSG00000162433 AK4 638743 sc-eQTL 8.24e-01 -0.014 0.0626 0.387 pDC L2
ENSG00000162434 JAK1 718538 sc-eQTL 5.05e-02 0.163 0.0826 0.387 pDC L2
ENSG00000184588 PDE4B -6222 sc-eQTL 7.47e-01 -0.0235 0.0729 0.387 pDC L2
ENSG00000213625 LEPROT 365705 sc-eQTL 4.89e-01 0.0718 0.104 0.387 pDC L2
ENSG00000285079 AL513493.1 82330 sc-eQTL 6.20e-01 -0.0388 0.0783 0.387 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 718538 sc-eQTL 7.83e-02 0.126 0.0713 0.38 B_Memory LOneK1K
ENSG00000184588 PDE4B -6222 sc-eQTL 4.37e-02 0.119 0.0585 0.38 B_Memory LOneK1K
ENSG00000213625 LEPROT 365705 sc-eQTL 2.93e-01 0.097 0.092 0.38 B_Memory LOneK1K
ENSG00000162434 JAK1 718538 sc-eQTL 4.43e-01 0.054 0.0704 0.38 B_Naive LOneK1K
ENSG00000184588 PDE4B -6222 sc-eQTL 3.52e-01 0.0589 0.0632 0.38 B_Naive LOneK1K
ENSG00000213625 LEPROT 365705 sc-eQTL 4.93e-01 -0.061 0.089 0.38 B_Naive LOneK1K
ENSG00000116678 LEPR 365640 sc-eQTL 6.48e-01 0.0409 0.0895 0.38 CD14_Mono LOneK1K
ENSG00000162433 AK4 638743 sc-eQTL 8.63e-01 0.0148 0.0857 0.38 CD14_Mono LOneK1K
ENSG00000162434 JAK1 718538 sc-eQTL 1.91e-01 0.0936 0.0714 0.38 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -6222 sc-eQTL 4.35e-01 -0.0286 0.0365 0.38 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 365705 sc-eQTL 9.65e-01 -0.00266 0.0601 0.38 CD14_Mono LOneK1K
ENSG00000116678 LEPR 365640 sc-eQTL 4.72e-01 -0.0648 0.09 0.381 CD16_Mono LOneK1K
ENSG00000162433 AK4 638743 sc-eQTL 5.14e-01 0.0533 0.0815 0.381 CD16_Mono LOneK1K
ENSG00000162434 JAK1 718538 sc-eQTL 6.85e-01 0.0223 0.0549 0.381 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -6222 sc-eQTL 8.89e-01 -0.00585 0.0419 0.381 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 365705 sc-eQTL 3.03e-01 0.0788 0.0763 0.381 CD16_Mono LOneK1K
ENSG00000116678 LEPR 365640 sc-eQTL 1.25e-01 0.143 0.0928 0.379 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 718538 sc-eQTL 8.27e-01 0.00956 0.0437 0.379 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -6222 sc-eQTL 9.42e-01 0.00492 0.0678 0.379 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 365705 sc-eQTL 5.03e-01 0.0648 0.0966 0.379 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162433 AK4 638743 eQTL 0.013 0.0545 0.0219 0.0 0.0 0.421

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162433 AK4 638743 4.68e-07 2.88e-07 8.02e-08 2.87e-07 1.08e-07 1.26e-07 3.57e-07 7.65e-08 2.6e-07 1.39e-07 3.25e-07 2.04e-07 4.34e-07 9.15e-08 9.12e-08 1.46e-07 9.3e-08 2.83e-07 9.19e-08 8.69e-08 1.48e-07 2.3e-07 2.33e-07 5.6e-08 4.11e-07 1.94e-07 1.78e-07 1.7e-07 1.76e-07 2.39e-07 1.88e-07 4.71e-08 4.74e-08 1.01e-07 1.39e-07 5.14e-08 6.39e-08 6.32e-08 4.74e-08 7.92e-08 4.73e-08 2.43e-07 3.2e-08 1.55e-08 4.91e-08 8.94e-09 9.07e-08 0.0 4.72e-08