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Genes within 1Mb (chr1:65768456:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 700702 sc-eQTL 2.58e-01 0.0633 0.0558 0.382 B L1
ENSG00000184588 PDE4B -24058 sc-eQTL 5.41e-01 0.0358 0.0584 0.382 B L1
ENSG00000213625 LEPROT 347869 sc-eQTL 9.96e-01 -0.000329 0.0715 0.382 B L1
ENSG00000162434 JAK1 700702 sc-eQTL 6.74e-01 0.0228 0.0542 0.382 CD4T L1
ENSG00000184588 PDE4B -24058 sc-eQTL 4.48e-01 -0.0491 0.0645 0.382 CD4T L1
ENSG00000213625 LEPROT 347869 sc-eQTL 6.33e-01 0.0405 0.0847 0.382 CD4T L1
ENSG00000116678 LEPR 347804 sc-eQTL 1.90e-01 -0.12 0.0916 0.382 CD8T L1
ENSG00000162434 JAK1 700702 sc-eQTL 1.56e-01 0.101 0.071 0.382 CD8T L1
ENSG00000184588 PDE4B -24058 sc-eQTL 6.83e-01 -0.0249 0.0609 0.382 CD8T L1
ENSG00000213625 LEPROT 347869 sc-eQTL 1.99e-01 0.121 0.0942 0.382 CD8T L1
ENSG00000116678 LEPR 347804 sc-eQTL 9.20e-01 0.00924 0.0916 0.39 DC L1
ENSG00000162433 AK4 620907 sc-eQTL 9.27e-01 0.00707 0.077 0.39 DC L1
ENSG00000162434 JAK1 700702 sc-eQTL 1.26e-01 0.0979 0.0637 0.39 DC L1
ENSG00000184588 PDE4B -24058 sc-eQTL 5.72e-01 -0.0281 0.0496 0.39 DC L1
ENSG00000213625 LEPROT 347869 sc-eQTL 6.08e-01 0.0467 0.0908 0.39 DC L1
ENSG00000285079 AL513493.1 64494 sc-eQTL 5.95e-01 -0.026 0.0489 0.39 DC L1
ENSG00000116678 LEPR 347804 sc-eQTL 6.37e-01 0.0426 0.0902 0.382 Mono L1
ENSG00000162433 AK4 620907 sc-eQTL 6.90e-01 0.0329 0.0825 0.382 Mono L1
ENSG00000162434 JAK1 700702 sc-eQTL 2.41e-01 0.069 0.0587 0.382 Mono L1
ENSG00000184588 PDE4B -24058 sc-eQTL 9.60e-01 0.00162 0.0326 0.382 Mono L1
ENSG00000213625 LEPROT 347869 sc-eQTL 7.26e-01 0.0205 0.0583 0.382 Mono L1
ENSG00000116678 LEPR 347804 sc-eQTL 2.34e-01 0.106 0.0885 0.384 NK L1
ENSG00000162434 JAK1 700702 sc-eQTL 6.41e-01 0.0196 0.0419 0.384 NK L1
ENSG00000184588 PDE4B -24058 sc-eQTL 8.50e-01 -0.0108 0.0573 0.384 NK L1
ENSG00000213625 LEPROT 347869 sc-eQTL 6.64e-01 0.0416 0.0957 0.384 NK L1
ENSG00000162434 JAK1 700702 sc-eQTL 5.06e-01 0.0399 0.06 0.382 Other_T L1
ENSG00000184588 PDE4B -24058 sc-eQTL 4.25e-01 -0.0521 0.0651 0.382 Other_T L1
ENSG00000213625 LEPROT 347869 sc-eQTL 3.24e-01 -0.0929 0.094 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 700702 sc-eQTL 5.62e-01 0.0578 0.0994 0.37 B_Activated L2
ENSG00000184588 PDE4B -24058 sc-eQTL 3.60e-01 0.0723 0.0788 0.37 B_Activated L2
ENSG00000213625 LEPROT 347869 sc-eQTL 4.30e-01 0.0822 0.104 0.37 B_Activated L2
ENSG00000162434 JAK1 700702 sc-eQTL 5.60e-02 0.153 0.0796 0.38 B_Intermediate L2
ENSG00000184588 PDE4B -24058 sc-eQTL 3.25e-01 0.0644 0.0652 0.38 B_Intermediate L2
ENSG00000213625 LEPROT 347869 sc-eQTL 6.24e-01 0.0461 0.094 0.38 B_Intermediate L2
ENSG00000162434 JAK1 700702 sc-eQTL 1.91e-01 0.105 0.0798 0.386 B_Memory L2
ENSG00000184588 PDE4B -24058 sc-eQTL 8.87e-02 0.139 0.0813 0.386 B_Memory L2
ENSG00000213625 LEPROT 347869 sc-eQTL 6.08e-01 0.0478 0.0931 0.386 B_Memory L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.12e-01 0.0596 0.0725 0.382 B_Naive1 L2
ENSG00000184588 PDE4B -24058 sc-eQTL 7.60e-01 0.0215 0.07 0.382 B_Naive1 L2
ENSG00000213625 LEPROT 347869 sc-eQTL 3.94e-01 -0.0807 0.0946 0.382 B_Naive1 L2
ENSG00000162434 JAK1 700702 sc-eQTL 8.93e-01 -0.0102 0.0763 0.384 B_Naive2 L2
ENSG00000184588 PDE4B -24058 sc-eQTL 1.64e-02 0.144 0.0595 0.384 B_Naive2 L2
ENSG00000213625 LEPROT 347869 sc-eQTL 5.65e-01 0.053 0.092 0.384 B_Naive2 L2
ENSG00000162434 JAK1 700702 sc-eQTL 1.86e-01 0.114 0.0862 0.377 CD4_CTL L2
ENSG00000184588 PDE4B -24058 sc-eQTL 6.50e-01 -0.0347 0.0765 0.377 CD4_CTL L2
ENSG00000213625 LEPROT 347869 sc-eQTL 3.33e-01 0.0963 0.0992 0.377 CD4_CTL L2
ENSG00000162434 JAK1 700702 sc-eQTL 8.30e-01 -0.0113 0.0526 0.382 CD4_Naive L2
ENSG00000184588 PDE4B -24058 sc-eQTL 5.70e-01 -0.0375 0.0658 0.382 CD4_Naive L2
ENSG00000213625 LEPROT 347869 sc-eQTL 8.16e-01 0.0198 0.0853 0.382 CD4_Naive L2
ENSG00000162434 JAK1 700702 sc-eQTL 3.51e-01 0.0562 0.0602 0.382 CD4_TCM L2
ENSG00000184588 PDE4B -24058 sc-eQTL 9.88e-01 -0.00103 0.069 0.382 CD4_TCM L2
ENSG00000213625 LEPROT 347869 sc-eQTL 9.17e-01 0.00909 0.0874 0.382 CD4_TCM L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.29e-01 0.0639 0.0808 0.382 CD4_TEM L2
ENSG00000184588 PDE4B -24058 sc-eQTL 3.53e-01 0.0694 0.0746 0.382 CD4_TEM L2
ENSG00000213625 LEPROT 347869 sc-eQTL 3.64e-01 0.0873 0.0959 0.382 CD4_TEM L2
ENSG00000116678 LEPR 347804 sc-eQTL 1.34e-01 -0.135 0.0902 0.382 CD8_CTL L2
ENSG00000162434 JAK1 700702 sc-eQTL 3.87e-01 0.0658 0.076 0.382 CD8_CTL L2
ENSG00000184588 PDE4B -24058 sc-eQTL 9.92e-01 0.000748 0.0704 0.382 CD8_CTL L2
ENSG00000213625 LEPROT 347869 sc-eQTL 7.89e-01 -0.025 0.093 0.382 CD8_CTL L2
ENSG00000116678 LEPR 347804 sc-eQTL 1.88e-01 -0.118 0.0892 0.382 CD8_Naive L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.47e-01 0.0568 0.0745 0.382 CD8_Naive L2
ENSG00000184588 PDE4B -24058 sc-eQTL 6.57e-01 -0.0279 0.0627 0.382 CD8_Naive L2
ENSG00000213625 LEPROT 347869 sc-eQTL 3.12e-01 0.0924 0.0912 0.382 CD8_Naive L2
ENSG00000116678 LEPR 347804 sc-eQTL 8.23e-01 0.0204 0.0911 0.387 CD8_TCM L2
ENSG00000162434 JAK1 700702 sc-eQTL 1.39e-01 0.117 0.0787 0.387 CD8_TCM L2
ENSG00000184588 PDE4B -24058 sc-eQTL 3.45e-01 0.0823 0.0869 0.387 CD8_TCM L2
ENSG00000213625 LEPROT 347869 sc-eQTL 2.36e-01 -0.117 0.0984 0.387 CD8_TCM L2
ENSG00000116678 LEPR 347804 sc-eQTL 7.84e-01 0.0233 0.0846 0.381 CD8_TEM L2
ENSG00000162434 JAK1 700702 sc-eQTL 2.60e-01 0.108 0.0954 0.381 CD8_TEM L2
ENSG00000184588 PDE4B -24058 sc-eQTL 4.20e-01 -0.0657 0.0812 0.381 CD8_TEM L2
ENSG00000213625 LEPROT 347869 sc-eQTL 8.32e-02 0.17 0.0979 0.381 CD8_TEM L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.24e-01 0.0663 0.0828 0.385 MAIT L2
ENSG00000184588 PDE4B -24058 sc-eQTL 1.30e-02 -0.175 0.0699 0.385 MAIT L2
ENSG00000213625 LEPROT 347869 sc-eQTL 2.24e-02 -0.217 0.0943 0.385 MAIT L2
ENSG00000116678 LEPR 347804 sc-eQTL 2.82e-01 -0.0973 0.0902 0.389 NK_CD56bright L2
ENSG00000162434 JAK1 700702 sc-eQTL 9.04e-01 0.0075 0.062 0.389 NK_CD56bright L2
ENSG00000184588 PDE4B -24058 sc-eQTL 9.65e-01 0.00329 0.0744 0.389 NK_CD56bright L2
ENSG00000213625 LEPROT 347869 sc-eQTL 2.02e-01 0.13 0.101 0.389 NK_CD56bright L2
ENSG00000116678 LEPR 347804 sc-eQTL 3.02e-01 0.0961 0.0929 0.381 NK_CD56dim L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.35e-01 0.038 0.0486 0.381 NK_CD56dim L2
ENSG00000184588 PDE4B -24058 sc-eQTL 9.15e-01 -0.00756 0.0711 0.381 NK_CD56dim L2
ENSG00000213625 LEPROT 347869 sc-eQTL 9.58e-01 0.00522 0.0984 0.381 NK_CD56dim L2
ENSG00000116678 LEPR 347804 sc-eQTL 6.47e-01 -0.0385 0.084 0.374 NK_HLA L2
ENSG00000162434 JAK1 700702 sc-eQTL 2.67e-01 0.0725 0.0652 0.374 NK_HLA L2
ENSG00000184588 PDE4B -24058 sc-eQTL 3.68e-01 -0.0717 0.0795 0.374 NK_HLA L2
ENSG00000213625 LEPROT 347869 sc-eQTL 6.89e-01 0.0406 0.101 0.374 NK_HLA L2
ENSG00000116678 LEPR 347804 sc-eQTL 3.65e-01 0.0828 0.0912 0.381 NK_cytokine L2
ENSG00000162434 JAK1 700702 sc-eQTL 9.54e-01 -0.00306 0.0532 0.381 NK_cytokine L2
ENSG00000184588 PDE4B -24058 sc-eQTL 2.64e-01 0.0931 0.0831 0.381 NK_cytokine L2
ENSG00000213625 LEPROT 347869 sc-eQTL 1.78e-01 0.13 0.0963 0.381 NK_cytokine L2
ENSG00000162434 JAK1 700702 sc-eQTL 7.35e-01 -0.0289 0.0852 0.396 PB L2
ENSG00000184588 PDE4B -24058 sc-eQTL 8.09e-01 -0.0263 0.108 0.396 PB L2
ENSG00000213625 LEPROT 347869 sc-eQTL 5.98e-01 -0.0631 0.119 0.396 PB L2
ENSG00000162434 JAK1 700702 sc-eQTL 8.83e-01 -0.00904 0.0615 0.378 Pro_T L2
ENSG00000184588 PDE4B -24058 sc-eQTL 1.91e-01 0.0987 0.0752 0.378 Pro_T L2
ENSG00000213625 LEPROT 347869 sc-eQTL 7.45e-01 0.0312 0.0957 0.378 Pro_T L2
ENSG00000162434 JAK1 700702 sc-eQTL 2.25e-01 0.0932 0.0765 0.382 Treg L2
ENSG00000184588 PDE4B -24058 sc-eQTL 4.07e-01 -0.0581 0.0699 0.382 Treg L2
ENSG00000213625 LEPROT 347869 sc-eQTL 9.77e-01 0.00293 0.0996 0.382 Treg L2
ENSG00000116678 LEPR 347804 sc-eQTL 8.23e-01 0.0212 0.0943 0.393 cDC L2
ENSG00000162433 AK4 620907 sc-eQTL 7.81e-01 0.0231 0.0833 0.393 cDC L2
ENSG00000162434 JAK1 700702 sc-eQTL 2.17e-01 0.0959 0.0774 0.393 cDC L2
ENSG00000184588 PDE4B -24058 sc-eQTL 9.45e-01 0.00358 0.0522 0.393 cDC L2
ENSG00000213625 LEPROT 347869 sc-eQTL 9.59e-01 -0.00483 0.0948 0.393 cDC L2
ENSG00000285079 AL513493.1 64494 sc-eQTL 8.30e-01 -0.00731 0.034 0.393 cDC L2
ENSG00000116678 LEPR 347804 sc-eQTL 7.71e-01 -0.0265 0.0909 0.382 cMono_IL1B L2
ENSG00000162433 AK4 620907 sc-eQTL 4.31e-01 0.0659 0.0836 0.382 cMono_IL1B L2
ENSG00000162434 JAK1 700702 sc-eQTL 5.69e-02 0.144 0.0754 0.382 cMono_IL1B L2
ENSG00000184588 PDE4B -24058 sc-eQTL 4.51e-01 -0.0319 0.0421 0.382 cMono_IL1B L2
ENSG00000213625 LEPROT 347869 sc-eQTL 6.90e-01 -0.0246 0.0615 0.382 cMono_IL1B L2
ENSG00000116678 LEPR 347804 sc-eQTL 3.75e-01 0.0795 0.0894 0.382 cMono_S100A L2
ENSG00000162433 AK4 620907 sc-eQTL 9.68e-01 0.00338 0.085 0.382 cMono_S100A L2
ENSG00000162434 JAK1 700702 sc-eQTL 5.29e-01 0.0494 0.0784 0.382 cMono_S100A L2
ENSG00000184588 PDE4B -24058 sc-eQTL 1.36e-01 -0.0661 0.0441 0.382 cMono_S100A L2
ENSG00000213625 LEPROT 347869 sc-eQTL 4.03e-01 0.0614 0.0732 0.382 cMono_S100A L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.70e-01 0.0811 0.112 0.397 gdT L2
ENSG00000184588 PDE4B -24058 sc-eQTL 1.46e-01 0.0948 0.0649 0.397 gdT L2
ENSG00000213625 LEPROT 347869 sc-eQTL 8.37e-01 0.0244 0.118 0.397 gdT L2
ENSG00000116678 LEPR 347804 sc-eQTL 2.89e-01 -0.0931 0.0877 0.387 intMono L2
ENSG00000162433 AK4 620907 sc-eQTL 2.06e-01 0.105 0.0825 0.387 intMono L2
ENSG00000162434 JAK1 700702 sc-eQTL 4.76e-01 -0.0546 0.0765 0.387 intMono L2
ENSG00000184588 PDE4B -24058 sc-eQTL 6.64e-01 -0.0193 0.0442 0.387 intMono L2
ENSG00000213625 LEPROT 347869 sc-eQTL 4.21e-01 0.0595 0.0737 0.387 intMono L2
ENSG00000116678 LEPR 347804 sc-eQTL 6.17e-01 0.0449 0.0896 0.373 ncMono L2
ENSG00000162433 AK4 620907 sc-eQTL 4.38e-01 0.062 0.0798 0.373 ncMono L2
ENSG00000162434 JAK1 700702 sc-eQTL 1.64e-01 0.0899 0.0643 0.373 ncMono L2
ENSG00000184588 PDE4B -24058 sc-eQTL 7.08e-01 -0.0193 0.0513 0.373 ncMono L2
ENSG00000213625 LEPROT 347869 sc-eQTL 2.29e-01 0.11 0.0914 0.373 ncMono L2
ENSG00000116678 LEPR 347804 sc-eQTL 7.40e-01 -0.0316 0.0952 0.39 pDC L2
ENSG00000162433 AK4 620907 sc-eQTL 9.75e-01 -0.00198 0.0621 0.39 pDC L2
ENSG00000162434 JAK1 700702 sc-eQTL 7.32e-02 0.148 0.0821 0.39 pDC L2
ENSG00000184588 PDE4B -24058 sc-eQTL 6.68e-01 -0.0311 0.0723 0.39 pDC L2
ENSG00000213625 LEPROT 347869 sc-eQTL 5.52e-01 0.0613 0.103 0.39 pDC L2
ENSG00000285079 AL513493.1 64494 sc-eQTL 5.74e-01 -0.0438 0.0776 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 700702 sc-eQTL 7.74e-02 0.125 0.0707 0.382 B_Memory LOneK1K
ENSG00000184588 PDE4B -24058 sc-eQTL 4.30e-02 0.118 0.0579 0.382 B_Memory LOneK1K
ENSG00000213625 LEPROT 347869 sc-eQTL 2.98e-01 0.0952 0.0912 0.382 B_Memory LOneK1K
ENSG00000162434 JAK1 700702 sc-eQTL 5.31e-01 0.044 0.07 0.382 B_Naive LOneK1K
ENSG00000184588 PDE4B -24058 sc-eQTL 4.04e-01 0.0525 0.0628 0.382 B_Naive LOneK1K
ENSG00000213625 LEPROT 347869 sc-eQTL 4.49e-01 -0.0671 0.0885 0.382 B_Naive LOneK1K
ENSG00000116678 LEPR 347804 sc-eQTL 6.05e-01 0.046 0.0889 0.382 CD14_Mono LOneK1K
ENSG00000162433 AK4 620907 sc-eQTL 8.96e-01 0.0111 0.0851 0.382 CD14_Mono LOneK1K
ENSG00000162434 JAK1 700702 sc-eQTL 2.34e-01 0.0847 0.071 0.382 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -24058 sc-eQTL 3.95e-01 -0.0309 0.0363 0.382 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 347869 sc-eQTL 9.67e-01 -0.0025 0.0597 0.382 CD14_Mono LOneK1K
ENSG00000116678 LEPR 347804 sc-eQTL 4.72e-01 -0.0645 0.0894 0.384 CD16_Mono LOneK1K
ENSG00000162433 AK4 620907 sc-eQTL 4.40e-01 0.0626 0.0809 0.384 CD16_Mono LOneK1K
ENSG00000162434 JAK1 700702 sc-eQTL 7.52e-01 0.0173 0.0545 0.384 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -24058 sc-eQTL 8.88e-01 -0.00589 0.0417 0.384 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 347869 sc-eQTL 2.85e-01 0.0812 0.0758 0.384 CD16_Mono LOneK1K
ENSG00000116678 LEPR 347804 sc-eQTL 1.29e-01 0.141 0.0922 0.381 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 700702 sc-eQTL 6.10e-01 0.0222 0.0434 0.381 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -24058 sc-eQTL 9.80e-01 0.00172 0.0674 0.381 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 347869 sc-eQTL 5.04e-01 0.0643 0.096 0.381 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162433 AK4 620907 eQTL 0.0129 0.0546 0.0219 0.0 0.0 0.421

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116675 \N 520237 5.14e-07 2.67e-07 7.97e-08 2.48e-07 1.05e-07 1.32e-07 3.44e-07 8.86e-08 2.6e-07 1.6e-07 3.21e-07 2.28e-07 4.11e-07 8.85e-08 1.12e-07 1.49e-07 1.18e-07 2.93e-07 9.97e-08 8.39e-08 1.65e-07 2.48e-07 2.33e-07 9.01e-08 3.55e-07 2.13e-07 1.74e-07 1.67e-07 2.03e-07 2.52e-07 1.76e-07 8.25e-08 5.64e-08 1.23e-07 1.33e-07 5.7e-08 6.87e-08 6.46e-08 5.25e-08 8.3e-08 3.43e-08 2.65e-07 2.94e-08 1.13e-08 8.01e-08 9.12e-09 9.52e-08 2.99e-09 5.69e-08
ENSG00000162433 AK4 620907 3.21e-07 1.7e-07 6.86e-08 2.27e-07 1.08e-07 8.4e-08 2.4e-07 6.57e-08 1.89e-07 1.11e-07 1.83e-07 1.52e-07 2.45e-07 8.15e-08 6.2e-08 9.35e-08 5.57e-08 2.15e-07 7.42e-08 6.29e-08 1.27e-07 1.89e-07 1.75e-07 4.15e-08 2.28e-07 1.65e-07 1.31e-07 1.36e-07 1.34e-07 1.39e-07 1.22e-07 4.51e-08 4.27e-08 9.5e-08 5.24e-08 3.5e-08 5.02e-08 6.98e-08 6.29e-08 6.19e-08 4.58e-08 1.6e-07 3.02e-08 1.09e-08 3.61e-08 6.83e-09 7.8e-08 0.0 4.68e-08