logo

Genes within 1Mb (chr1:65669015:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 601261 sc-eQTL 8.38e-01 0.0175 0.0856 0.882 B L1
ENSG00000184588 PDE4B -123499 sc-eQTL 2.32e-02 0.202 0.0883 0.882 B L1
ENSG00000213625 LEPROT 248428 sc-eQTL 4.75e-01 -0.0783 0.109 0.882 B L1
ENSG00000162434 JAK1 601261 sc-eQTL 9.99e-01 -8.29e-05 0.0842 0.882 CD4T L1
ENSG00000184588 PDE4B -123499 sc-eQTL 5.14e-02 0.195 0.0996 0.882 CD4T L1
ENSG00000213625 LEPROT 248428 sc-eQTL 3.02e-01 -0.136 0.131 0.882 CD4T L1
ENSG00000116678 LEPR 248363 sc-eQTL 4.62e-01 0.104 0.141 0.882 CD8T L1
ENSG00000162434 JAK1 601261 sc-eQTL 3.76e-01 -0.0971 0.11 0.882 CD8T L1
ENSG00000184588 PDE4B -123499 sc-eQTL 8.61e-03 0.244 0.0922 0.882 CD8T L1
ENSG00000213625 LEPROT 248428 sc-eQTL 4.78e-01 -0.103 0.145 0.882 CD8T L1
ENSG00000116678 LEPR 248363 sc-eQTL 4.28e-01 -0.111 0.14 0.883 DC L1
ENSG00000162433 AK4 521466 sc-eQTL 6.94e-01 -0.0464 0.118 0.883 DC L1
ENSG00000162434 JAK1 601261 sc-eQTL 2.48e-01 -0.113 0.0978 0.883 DC L1
ENSG00000162437 RAVER2 923920 sc-eQTL 9.41e-02 0.21 0.125 0.883 DC L1
ENSG00000184588 PDE4B -123499 sc-eQTL 6.81e-02 0.138 0.0754 0.883 DC L1
ENSG00000213625 LEPROT 248428 sc-eQTL 1.87e-01 -0.183 0.139 0.883 DC L1
ENSG00000285079 AL513493.1 -34947 sc-eQTL 5.89e-04 -0.254 0.0727 0.883 DC L1
ENSG00000116678 LEPR 248363 sc-eQTL 1.70e-01 -0.191 0.139 0.882 Mono L1
ENSG00000162433 AK4 521466 sc-eQTL 9.92e-01 0.00125 0.127 0.882 Mono L1
ENSG00000162434 JAK1 601261 sc-eQTL 6.67e-01 -0.0392 0.0909 0.882 Mono L1
ENSG00000184588 PDE4B -123499 sc-eQTL 3.84e-01 0.0438 0.0502 0.882 Mono L1
ENSG00000213625 LEPROT 248428 sc-eQTL 1.92e-01 -0.117 0.0897 0.882 Mono L1
ENSG00000116678 LEPR 248363 sc-eQTL 8.72e-01 -0.0217 0.135 0.882 NK L1
ENSG00000162434 JAK1 601261 sc-eQTL 3.15e-01 -0.0639 0.0635 0.882 NK L1
ENSG00000184588 PDE4B -123499 sc-eQTL 1.26e-03 0.277 0.0847 0.882 NK L1
ENSG00000213625 LEPROT 248428 sc-eQTL 4.06e-02 -0.296 0.144 0.882 NK L1
ENSG00000162434 JAK1 601261 sc-eQTL 1.81e-02 -0.215 0.0902 0.882 Other_T L1
ENSG00000162437 RAVER2 923920 sc-eQTL 5.62e-02 -0.253 0.132 0.882 Other_T L1
ENSG00000184588 PDE4B -123499 sc-eQTL 3.45e-01 0.0937 0.0991 0.882 Other_T L1
ENSG00000213625 LEPROT 248428 sc-eQTL 9.58e-01 -0.00754 0.144 0.882 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 601261 sc-eQTL 2.21e-01 -0.19 0.155 0.89 B_Activated L2
ENSG00000184588 PDE4B -123499 sc-eQTL 7.06e-01 0.0466 0.123 0.89 B_Activated L2
ENSG00000213625 LEPROT 248428 sc-eQTL 2.21e-01 0.199 0.162 0.89 B_Activated L2
ENSG00000162434 JAK1 601261 sc-eQTL 2.56e-01 0.14 0.123 0.884 B_Intermediate L2
ENSG00000184588 PDE4B -123499 sc-eQTL 5.95e-02 0.189 0.0995 0.884 B_Intermediate L2
ENSG00000213625 LEPROT 248428 sc-eQTL 8.12e-01 -0.0344 0.144 0.884 B_Intermediate L2
ENSG00000162434 JAK1 601261 sc-eQTL 8.40e-01 -0.025 0.124 0.881 B_Memory L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.46e-01 0.184 0.126 0.881 B_Memory L2
ENSG00000213625 LEPROT 248428 sc-eQTL 6.14e-01 -0.0727 0.144 0.881 B_Memory L2
ENSG00000162434 JAK1 601261 sc-eQTL 9.82e-01 -0.00251 0.109 0.882 B_Naive1 L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.05e-03 0.339 0.102 0.882 B_Naive1 L2
ENSG00000213625 LEPROT 248428 sc-eQTL 6.08e-01 0.0727 0.142 0.882 B_Naive1 L2
ENSG00000162434 JAK1 601261 sc-eQTL 7.23e-01 0.0408 0.115 0.882 B_Naive2 L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.74e-02 0.216 0.0899 0.882 B_Naive2 L2
ENSG00000213625 LEPROT 248428 sc-eQTL 3.35e-01 -0.134 0.139 0.882 B_Naive2 L2
ENSG00000162434 JAK1 601261 sc-eQTL 1.90e-01 -0.171 0.13 0.882 CD4_CTL L2
ENSG00000184588 PDE4B -123499 sc-eQTL 6.53e-02 0.213 0.115 0.882 CD4_CTL L2
ENSG00000213625 LEPROT 248428 sc-eQTL 8.81e-01 0.0225 0.15 0.882 CD4_CTL L2
ENSG00000162434 JAK1 601261 sc-eQTL 7.20e-01 0.0295 0.082 0.882 CD4_Naive L2
ENSG00000184588 PDE4B -123499 sc-eQTL 4.15e-02 0.208 0.102 0.882 CD4_Naive L2
ENSG00000213625 LEPROT 248428 sc-eQTL 4.10e-01 -0.11 0.133 0.882 CD4_Naive L2
ENSG00000162434 JAK1 601261 sc-eQTL 7.01e-01 0.036 0.0937 0.882 CD4_TCM L2
ENSG00000184588 PDE4B -123499 sc-eQTL 2.50e-03 0.321 0.105 0.882 CD4_TCM L2
ENSG00000213625 LEPROT 248428 sc-eQTL 3.50e-01 -0.127 0.136 0.882 CD4_TCM L2
ENSG00000162434 JAK1 601261 sc-eQTL 1.15e-01 -0.196 0.124 0.882 CD4_TEM L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.15e-01 0.181 0.115 0.882 CD4_TEM L2
ENSG00000213625 LEPROT 248428 sc-eQTL 7.41e-01 -0.049 0.148 0.882 CD4_TEM L2
ENSG00000116678 LEPR 248363 sc-eQTL 4.32e-02 0.283 0.139 0.882 CD8_CTL L2
ENSG00000162434 JAK1 601261 sc-eQTL 1.36e-01 -0.176 0.117 0.882 CD8_CTL L2
ENSG00000184588 PDE4B -123499 sc-eQTL 2.00e-02 0.253 0.108 0.882 CD8_CTL L2
ENSG00000213625 LEPROT 248428 sc-eQTL 8.81e-01 0.0216 0.144 0.882 CD8_CTL L2
ENSG00000116678 LEPR 248363 sc-eQTL 8.99e-01 0.0177 0.139 0.882 CD8_Naive L2
ENSG00000162434 JAK1 601261 sc-eQTL 4.41e-01 -0.0892 0.116 0.882 CD8_Naive L2
ENSG00000184588 PDE4B -123499 sc-eQTL 6.03e-02 0.182 0.0965 0.882 CD8_Naive L2
ENSG00000213625 LEPROT 248428 sc-eQTL 1.50e-01 -0.204 0.141 0.882 CD8_Naive L2
ENSG00000116678 LEPR 248363 sc-eQTL 4.77e-01 -0.1 0.141 0.882 CD8_TCM L2
ENSG00000162434 JAK1 601261 sc-eQTL 6.62e-01 0.0537 0.123 0.882 CD8_TCM L2
ENSG00000184588 PDE4B -123499 sc-eQTL 5.27e-01 0.0855 0.135 0.882 CD8_TCM L2
ENSG00000213625 LEPROT 248428 sc-eQTL 6.97e-01 0.0596 0.153 0.882 CD8_TCM L2
ENSG00000116678 LEPR 248363 sc-eQTL 8.64e-01 -0.0217 0.127 0.881 CD8_TEM L2
ENSG00000162434 JAK1 601261 sc-eQTL 6.27e-02 0.265 0.142 0.881 CD8_TEM L2
ENSG00000184588 PDE4B -123499 sc-eQTL 3.57e-02 0.254 0.12 0.881 CD8_TEM L2
ENSG00000213625 LEPROT 248428 sc-eQTL 9.70e-02 -0.244 0.146 0.881 CD8_TEM L2
ENSG00000162434 JAK1 601261 sc-eQTL 3.81e-01 -0.109 0.124 0.881 MAIT L2
ENSG00000162437 RAVER2 923920 sc-eQTL 3.04e-01 -0.136 0.132 0.881 MAIT L2
ENSG00000184588 PDE4B -123499 sc-eQTL 2.56e-01 0.12 0.106 0.881 MAIT L2
ENSG00000213625 LEPROT 248428 sc-eQTL 6.85e-01 0.0581 0.143 0.881 MAIT L2
ENSG00000116678 LEPR 248363 sc-eQTL 1.14e-02 -0.338 0.132 0.882 NK_CD56bright L2
ENSG00000162434 JAK1 601261 sc-eQTL 4.97e-01 -0.0626 0.092 0.882 NK_CD56bright L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.94e-03 0.339 0.108 0.882 NK_CD56bright L2
ENSG00000213625 LEPROT 248428 sc-eQTL 3.63e-01 -0.138 0.151 0.882 NK_CD56bright L2
ENSG00000116678 LEPR 248363 sc-eQTL 5.16e-01 0.0925 0.142 0.884 NK_CD56dim L2
ENSG00000162434 JAK1 601261 sc-eQTL 5.24e-01 -0.0474 0.0742 0.884 NK_CD56dim L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.20e-02 0.271 0.107 0.884 NK_CD56dim L2
ENSG00000213625 LEPROT 248428 sc-eQTL 6.32e-01 -0.0721 0.15 0.884 NK_CD56dim L2
ENSG00000116678 LEPR 248363 sc-eQTL 8.69e-01 -0.0205 0.124 0.881 NK_HLA L2
ENSG00000162434 JAK1 601261 sc-eQTL 1.60e-01 -0.135 0.0958 0.881 NK_HLA L2
ENSG00000184588 PDE4B -123499 sc-eQTL 3.00e-01 0.122 0.117 0.881 NK_HLA L2
ENSG00000213625 LEPROT 248428 sc-eQTL 5.49e-01 0.0895 0.149 0.881 NK_HLA L2
ENSG00000116678 LEPR 248363 sc-eQTL 7.97e-01 -0.0356 0.138 0.884 NK_cytokine L2
ENSG00000162434 JAK1 601261 sc-eQTL 4.44e-01 -0.0616 0.0804 0.884 NK_cytokine L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.26e-02 0.313 0.124 0.884 NK_cytokine L2
ENSG00000213625 LEPROT 248428 sc-eQTL 7.42e-05 -0.57 0.141 0.884 NK_cytokine L2
ENSG00000162434 JAK1 601261 sc-eQTL 6.06e-01 -0.0664 0.128 0.87 PB L2
ENSG00000184588 PDE4B -123499 sc-eQTL 8.12e-01 -0.039 0.163 0.87 PB L2
ENSG00000213625 LEPROT 248428 sc-eQTL 1.47e-01 -0.26 0.178 0.87 PB L2
ENSG00000162434 JAK1 601261 sc-eQTL 8.83e-01 -0.0137 0.0931 0.883 Pro_T L2
ENSG00000162437 RAVER2 923920 sc-eQTL 3.91e-01 -0.105 0.123 0.883 Pro_T L2
ENSG00000184588 PDE4B -123499 sc-eQTL 9.82e-01 0.0026 0.114 0.883 Pro_T L2
ENSG00000213625 LEPROT 248428 sc-eQTL 7.63e-01 0.0438 0.145 0.883 Pro_T L2
ENSG00000162434 JAK1 601261 sc-eQTL 8.01e-02 -0.204 0.116 0.882 Treg L2
ENSG00000184588 PDE4B -123499 sc-eQTL 8.70e-01 0.0175 0.107 0.882 Treg L2
ENSG00000213625 LEPROT 248428 sc-eQTL 7.58e-01 -0.0468 0.152 0.882 Treg L2
ENSG00000116678 LEPR 248363 sc-eQTL 4.05e-01 -0.123 0.147 0.885 cDC L2
ENSG00000162433 AK4 521466 sc-eQTL 4.40e-01 0.1 0.13 0.885 cDC L2
ENSG00000162434 JAK1 601261 sc-eQTL 3.04e-01 -0.125 0.121 0.885 cDC L2
ENSG00000162437 RAVER2 923920 sc-eQTL 1.89e-01 0.175 0.133 0.885 cDC L2
ENSG00000184588 PDE4B -123499 sc-eQTL 1.23e-01 0.125 0.0808 0.885 cDC L2
ENSG00000213625 LEPROT 248428 sc-eQTL 8.39e-01 -0.0301 0.148 0.885 cDC L2
ENSG00000285079 AL513493.1 -34947 sc-eQTL 6.13e-01 -0.0269 0.0531 0.885 cDC L2
ENSG00000116678 LEPR 248363 sc-eQTL 2.95e-01 -0.147 0.14 0.882 cMono_IL1B L2
ENSG00000162433 AK4 521466 sc-eQTL 9.81e-01 0.00312 0.129 0.882 cMono_IL1B L2
ENSG00000162434 JAK1 601261 sc-eQTL 4.25e-01 -0.0938 0.117 0.882 cMono_IL1B L2
ENSG00000184588 PDE4B -123499 sc-eQTL 9.78e-02 0.108 0.0647 0.882 cMono_IL1B L2
ENSG00000213625 LEPROT 248428 sc-eQTL 2.11e-01 -0.119 0.0946 0.882 cMono_IL1B L2
ENSG00000116678 LEPR 248363 sc-eQTL 9.65e-01 -0.00601 0.138 0.882 cMono_S100A L2
ENSG00000162433 AK4 521466 sc-eQTL 4.83e-01 0.0919 0.131 0.882 cMono_S100A L2
ENSG00000162434 JAK1 601261 sc-eQTL 7.32e-01 0.0414 0.121 0.882 cMono_S100A L2
ENSG00000184588 PDE4B -123499 sc-eQTL 3.37e-02 0.145 0.0676 0.882 cMono_S100A L2
ENSG00000213625 LEPROT 248428 sc-eQTL 2.82e-01 -0.121 0.113 0.882 cMono_S100A L2
ENSG00000162434 JAK1 601261 sc-eQTL 1.65e-01 -0.239 0.171 0.888 gdT L2
ENSG00000162437 RAVER2 923920 sc-eQTL 3.17e-01 -0.152 0.151 0.888 gdT L2
ENSG00000184588 PDE4B -123499 sc-eQTL 5.19e-02 0.194 0.099 0.888 gdT L2
ENSG00000213625 LEPROT 248428 sc-eQTL 8.87e-01 0.0259 0.182 0.888 gdT L2
ENSG00000116678 LEPR 248363 sc-eQTL 3.64e-01 0.128 0.141 0.889 intMono L2
ENSG00000162433 AK4 521466 sc-eQTL 5.39e-01 0.082 0.133 0.889 intMono L2
ENSG00000162434 JAK1 601261 sc-eQTL 5.47e-02 -0.236 0.122 0.889 intMono L2
ENSG00000184588 PDE4B -123499 sc-eQTL 6.88e-02 0.129 0.0706 0.889 intMono L2
ENSG00000213625 LEPROT 248428 sc-eQTL 1.21e-01 -0.184 0.118 0.889 intMono L2
ENSG00000116678 LEPR 248363 sc-eQTL 4.49e-01 -0.104 0.137 0.887 ncMono L2
ENSG00000162433 AK4 521466 sc-eQTL 4.35e-01 -0.0955 0.122 0.887 ncMono L2
ENSG00000162434 JAK1 601261 sc-eQTL 5.13e-01 -0.0648 0.0989 0.887 ncMono L2
ENSG00000184588 PDE4B -123499 sc-eQTL 3.88e-01 0.0679 0.0785 0.887 ncMono L2
ENSG00000213625 LEPROT 248428 sc-eQTL 9.75e-01 0.00449 0.14 0.887 ncMono L2
ENSG00000116678 LEPR 248363 sc-eQTL 7.99e-02 -0.244 0.138 0.876 pDC L2
ENSG00000162433 AK4 521466 sc-eQTL 8.78e-01 0.014 0.0912 0.876 pDC L2
ENSG00000162434 JAK1 601261 sc-eQTL 6.80e-01 -0.0502 0.122 0.876 pDC L2
ENSG00000162437 RAVER2 923920 sc-eQTL 3.05e-01 0.141 0.137 0.876 pDC L2
ENSG00000184588 PDE4B -123499 sc-eQTL 4.05e-01 0.0886 0.106 0.876 pDC L2
ENSG00000213625 LEPROT 248428 sc-eQTL 3.64e-01 0.137 0.151 0.876 pDC L2
ENSG00000285079 AL513493.1 -34947 sc-eQTL 3.55e-04 -0.4 0.109 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 601261 sc-eQTL 5.80e-01 0.0604 0.109 0.882 B_Memory LOneK1K
ENSG00000184588 PDE4B -123499 sc-eQTL 1.58e-01 0.127 0.0893 0.882 B_Memory LOneK1K
ENSG00000213625 LEPROT 248428 sc-eQTL 5.61e-01 -0.0816 0.14 0.882 B_Memory LOneK1K
ENSG00000162434 JAK1 601261 sc-eQTL 9.57e-01 -0.00568 0.105 0.882 B_Naive LOneK1K
ENSG00000184588 PDE4B -123499 sc-eQTL 1.20e-03 0.301 0.0916 0.882 B_Naive LOneK1K
ENSG00000213625 LEPROT 248428 sc-eQTL 7.71e-01 0.0384 0.132 0.882 B_Naive LOneK1K
ENSG00000116678 LEPR 248363 sc-eQTL 3.45e-01 -0.129 0.136 0.882 CD14_Mono LOneK1K
ENSG00000162433 AK4 521466 sc-eQTL 8.18e-01 0.03 0.13 0.882 CD14_Mono LOneK1K
ENSG00000162434 JAK1 601261 sc-eQTL 6.16e-01 -0.0547 0.109 0.882 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -123499 sc-eQTL 9.19e-02 0.0936 0.0553 0.882 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 248428 sc-eQTL 7.30e-02 -0.163 0.0907 0.882 CD14_Mono LOneK1K
ENSG00000116678 LEPR 248363 sc-eQTL 7.92e-01 -0.0374 0.142 0.884 CD16_Mono LOneK1K
ENSG00000162433 AK4 521466 sc-eQTL 6.22e-01 0.0632 0.128 0.884 CD16_Mono LOneK1K
ENSG00000162434 JAK1 601261 sc-eQTL 1.62e-01 -0.12 0.0858 0.884 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -123499 sc-eQTL 3.40e-01 0.0629 0.0658 0.884 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 248428 sc-eQTL 9.98e-01 -0.000269 0.12 0.884 CD16_Mono LOneK1K
ENSG00000116678 LEPR 248363 sc-eQTL 7.02e-01 0.0531 0.139 0.884 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 601261 sc-eQTL 2.85e-01 -0.0695 0.0648 0.884 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -123499 sc-eQTL 1.16e-02 0.253 0.0993 0.884 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 248428 sc-eQTL 1.58e-02 -0.345 0.142 0.884 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116678 LEPR 248363 pQTL 0.0127 -0.101 0.0403 0.00162 0.0 0.142

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina