logo

Genes within 1Mb (chr1:65660476:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 592722 sc-eQTL 7.47e-01 -0.0283 0.0874 0.891 B L1
ENSG00000184588 PDE4B -132038 sc-eQTL 2.28e-02 0.207 0.0901 0.891 B L1
ENSG00000213625 LEPROT 239889 sc-eQTL 4.42e-01 -0.0859 0.111 0.891 B L1
ENSG00000162434 JAK1 592722 sc-eQTL 9.17e-01 0.00899 0.0859 0.891 CD4T L1
ENSG00000184588 PDE4B -132038 sc-eQTL 2.61e-02 0.227 0.101 0.891 CD4T L1
ENSG00000213625 LEPROT 239889 sc-eQTL 3.13e-01 -0.135 0.134 0.891 CD4T L1
ENSG00000116678 LEPR 239824 sc-eQTL 3.11e-01 0.146 0.144 0.891 CD8T L1
ENSG00000162434 JAK1 592722 sc-eQTL 2.54e-01 -0.127 0.111 0.891 CD8T L1
ENSG00000184588 PDE4B -132038 sc-eQTL 9.04e-03 0.247 0.0939 0.891 CD8T L1
ENSG00000213625 LEPROT 239889 sc-eQTL 3.12e-01 -0.15 0.148 0.891 CD8T L1
ENSG00000116678 LEPR 239824 sc-eQTL 5.51e-01 -0.0857 0.143 0.892 DC L1
ENSG00000162433 AK4 512927 sc-eQTL 7.67e-01 -0.0358 0.121 0.892 DC L1
ENSG00000162434 JAK1 592722 sc-eQTL 1.80e-01 -0.134 0.0999 0.892 DC L1
ENSG00000162437 RAVER2 915381 sc-eQTL 1.53e-01 0.183 0.128 0.892 DC L1
ENSG00000184588 PDE4B -132038 sc-eQTL 1.02e-01 0.127 0.0772 0.892 DC L1
ENSG00000213625 LEPROT 239889 sc-eQTL 1.51e-01 -0.204 0.142 0.892 DC L1
ENSG00000285079 AL513493.1 -43486 sc-eQTL 9.93e-04 -0.249 0.0746 0.892 DC L1
ENSG00000116678 LEPR 239824 sc-eQTL 3.32e-01 -0.137 0.141 0.891 Mono L1
ENSG00000162433 AK4 512927 sc-eQTL 7.45e-01 0.0422 0.129 0.891 Mono L1
ENSG00000162434 JAK1 592722 sc-eQTL 5.56e-01 -0.0544 0.0922 0.891 Mono L1
ENSG00000184588 PDE4B -132038 sc-eQTL 3.25e-01 0.0502 0.051 0.891 Mono L1
ENSG00000213625 LEPROT 239889 sc-eQTL 1.04e-01 -0.148 0.0908 0.891 Mono L1
ENSG00000116678 LEPR 239824 sc-eQTL 8.58e-01 0.0248 0.138 0.891 NK L1
ENSG00000162434 JAK1 592722 sc-eQTL 6.97e-01 -0.0254 0.0652 0.891 NK L1
ENSG00000184588 PDE4B -132038 sc-eQTL 2.90e-04 0.318 0.0863 0.891 NK L1
ENSG00000213625 LEPROT 239889 sc-eQTL 1.01e-01 -0.243 0.148 0.891 NK L1
ENSG00000162434 JAK1 592722 sc-eQTL 2.32e-02 -0.211 0.0924 0.891 Other_T L1
ENSG00000162437 RAVER2 915381 sc-eQTL 7.46e-02 -0.242 0.135 0.891 Other_T L1
ENSG00000184588 PDE4B -132038 sc-eQTL 3.39e-01 0.0973 0.101 0.891 Other_T L1
ENSG00000213625 LEPROT 239889 sc-eQTL 7.85e-01 -0.0401 0.147 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 592722 sc-eQTL 2.95e-01 -0.168 0.16 0.898 B_Activated L2
ENSG00000184588 PDE4B -132038 sc-eQTL 2.77e-01 0.139 0.127 0.898 B_Activated L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.97e-01 0.216 0.167 0.898 B_Activated L2
ENSG00000162434 JAK1 592722 sc-eQTL 3.70e-01 0.113 0.126 0.893 B_Intermediate L2
ENSG00000184588 PDE4B -132038 sc-eQTL 6.17e-02 0.192 0.102 0.893 B_Intermediate L2
ENSG00000213625 LEPROT 239889 sc-eQTL 9.18e-01 -0.0153 0.148 0.893 B_Intermediate L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.00e-01 -0.0489 0.127 0.89 B_Memory L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.53e-01 0.185 0.129 0.89 B_Memory L2
ENSG00000213625 LEPROT 239889 sc-eQTL 8.56e-01 -0.0267 0.147 0.89 B_Memory L2
ENSG00000162434 JAK1 592722 sc-eQTL 9.46e-01 0.00743 0.111 0.891 B_Naive1 L2
ENSG00000184588 PDE4B -132038 sc-eQTL 3.75e-04 0.374 0.104 0.891 B_Naive1 L2
ENSG00000213625 LEPROT 239889 sc-eQTL 5.16e-01 0.0938 0.144 0.891 B_Naive1 L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.06e-01 0.0446 0.118 0.891 B_Naive2 L2
ENSG00000184588 PDE4B -132038 sc-eQTL 2.64e-02 0.207 0.0924 0.891 B_Naive2 L2
ENSG00000213625 LEPROT 239889 sc-eQTL 3.20e-01 -0.142 0.142 0.891 B_Naive2 L2
ENSG00000162434 JAK1 592722 sc-eQTL 6.64e-02 -0.246 0.133 0.891 CD4_CTL L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.63e-01 0.166 0.118 0.891 CD4_CTL L2
ENSG00000213625 LEPROT 239889 sc-eQTL 6.77e-01 0.0644 0.154 0.891 CD4_CTL L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.02e-01 0.032 0.0835 0.891 CD4_Naive L2
ENSG00000184588 PDE4B -132038 sc-eQTL 3.23e-02 0.223 0.103 0.891 CD4_Naive L2
ENSG00000213625 LEPROT 239889 sc-eQTL 5.22e-01 -0.0868 0.135 0.891 CD4_Naive L2
ENSG00000162434 JAK1 592722 sc-eQTL 5.59e-01 0.0559 0.0956 0.891 CD4_TCM L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.31e-03 0.348 0.107 0.891 CD4_TCM L2
ENSG00000213625 LEPROT 239889 sc-eQTL 2.32e-01 -0.166 0.138 0.891 CD4_TCM L2
ENSG00000162434 JAK1 592722 sc-eQTL 1.26e-01 -0.195 0.127 0.891 CD4_TEM L2
ENSG00000184588 PDE4B -132038 sc-eQTL 5.14e-02 0.229 0.117 0.891 CD4_TEM L2
ENSG00000213625 LEPROT 239889 sc-eQTL 4.75e-01 -0.108 0.151 0.891 CD4_TEM L2
ENSG00000116678 LEPR 239824 sc-eQTL 2.97e-02 0.309 0.141 0.891 CD8_CTL L2
ENSG00000162434 JAK1 592722 sc-eQTL 1.10e-01 -0.191 0.119 0.891 CD8_CTL L2
ENSG00000184588 PDE4B -132038 sc-eQTL 4.22e-02 0.224 0.11 0.891 CD8_CTL L2
ENSG00000213625 LEPROT 239889 sc-eQTL 7.01e-01 0.0562 0.146 0.891 CD8_CTL L2
ENSG00000116678 LEPR 239824 sc-eQTL 8.95e-01 -0.0187 0.142 0.891 CD8_Naive L2
ENSG00000162434 JAK1 592722 sc-eQTL 2.21e-01 -0.144 0.118 0.891 CD8_Naive L2
ENSG00000184588 PDE4B -132038 sc-eQTL 7.03e-02 0.179 0.0984 0.891 CD8_Naive L2
ENSG00000213625 LEPROT 239889 sc-eQTL 7.13e-02 -0.26 0.143 0.891 CD8_Naive L2
ENSG00000116678 LEPR 239824 sc-eQTL 6.72e-01 -0.0616 0.145 0.891 CD8_TCM L2
ENSG00000162434 JAK1 592722 sc-eQTL 8.72e-01 0.0205 0.126 0.891 CD8_TCM L2
ENSG00000184588 PDE4B -132038 sc-eQTL 4.43e-01 0.107 0.139 0.891 CD8_TCM L2
ENSG00000213625 LEPROT 239889 sc-eQTL 6.13e-01 0.0799 0.158 0.891 CD8_TCM L2
ENSG00000116678 LEPR 239824 sc-eQTL 7.52e-01 0.0412 0.13 0.89 CD8_TEM L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.97e-02 0.257 0.146 0.89 CD8_TEM L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.32e-01 0.188 0.124 0.89 CD8_TEM L2
ENSG00000213625 LEPROT 239889 sc-eQTL 9.51e-02 -0.252 0.15 0.89 CD8_TEM L2
ENSG00000162434 JAK1 592722 sc-eQTL 4.96e-01 -0.0864 0.127 0.89 MAIT L2
ENSG00000162437 RAVER2 915381 sc-eQTL 3.77e-01 -0.12 0.135 0.89 MAIT L2
ENSG00000184588 PDE4B -132038 sc-eQTL 2.14e-01 0.135 0.108 0.89 MAIT L2
ENSG00000213625 LEPROT 239889 sc-eQTL 8.99e-01 0.0186 0.146 0.89 MAIT L2
ENSG00000116678 LEPR 239824 sc-eQTL 2.87e-03 -0.407 0.135 0.891 NK_CD56bright L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.33e-01 -0.0322 0.0945 0.891 NK_CD56bright L2
ENSG00000184588 PDE4B -132038 sc-eQTL 6.85e-04 0.38 0.11 0.891 NK_CD56bright L2
ENSG00000213625 LEPROT 239889 sc-eQTL 2.86e-01 -0.166 0.155 0.891 NK_CD56bright L2
ENSG00000116678 LEPR 239824 sc-eQTL 4.08e-01 0.121 0.146 0.892 NK_CD56dim L2
ENSG00000162434 JAK1 592722 sc-eQTL 9.19e-01 0.00774 0.0763 0.892 NK_CD56dim L2
ENSG00000184588 PDE4B -132038 sc-eQTL 9.20e-03 0.288 0.11 0.892 NK_CD56dim L2
ENSG00000213625 LEPROT 239889 sc-eQTL 9.93e-01 -0.00129 0.154 0.892 NK_CD56dim L2
ENSG00000116678 LEPR 239824 sc-eQTL 6.37e-01 -0.0597 0.126 0.89 NK_HLA L2
ENSG00000162434 JAK1 592722 sc-eQTL 2.45e-01 -0.114 0.098 0.89 NK_HLA L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.73e-01 0.163 0.119 0.89 NK_HLA L2
ENSG00000213625 LEPROT 239889 sc-eQTL 2.42e-01 0.178 0.152 0.89 NK_HLA L2
ENSG00000116678 LEPR 239824 sc-eQTL 8.41e-01 0.0287 0.142 0.892 NK_cytokine L2
ENSG00000162434 JAK1 592722 sc-eQTL 6.80e-01 -0.0342 0.0829 0.892 NK_cytokine L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.10e-02 0.328 0.128 0.892 NK_cytokine L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.63e-04 -0.56 0.146 0.892 NK_cytokine L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.52e-01 -0.0416 0.131 0.878 PB L2
ENSG00000184588 PDE4B -132038 sc-eQTL 8.12e-01 -0.0398 0.167 0.878 PB L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.23e-01 -0.283 0.182 0.878 PB L2
ENSG00000162434 JAK1 592722 sc-eQTL 8.07e-01 0.0232 0.0948 0.891 Pro_T L2
ENSG00000162437 RAVER2 915381 sc-eQTL 7.65e-01 -0.0374 0.125 0.891 Pro_T L2
ENSG00000184588 PDE4B -132038 sc-eQTL 8.75e-01 0.0183 0.116 0.891 Pro_T L2
ENSG00000213625 LEPROT 239889 sc-eQTL 6.09e-01 0.0754 0.147 0.891 Pro_T L2
ENSG00000162434 JAK1 592722 sc-eQTL 2.05e-01 -0.151 0.119 0.891 Treg L2
ENSG00000184588 PDE4B -132038 sc-eQTL 8.15e-01 0.0255 0.109 0.891 Treg L2
ENSG00000213625 LEPROT 239889 sc-eQTL 7.97e-01 -0.0399 0.155 0.891 Treg L2
ENSG00000116678 LEPR 239824 sc-eQTL 4.73e-01 -0.108 0.151 0.895 cDC L2
ENSG00000162433 AK4 512927 sc-eQTL 4.79e-01 0.0943 0.133 0.895 cDC L2
ENSG00000162434 JAK1 592722 sc-eQTL 2.46e-01 -0.144 0.124 0.895 cDC L2
ENSG00000162437 RAVER2 915381 sc-eQTL 1.95e-01 0.177 0.136 0.895 cDC L2
ENSG00000184588 PDE4B -132038 sc-eQTL 3.12e-01 0.0843 0.0832 0.895 cDC L2
ENSG00000213625 LEPROT 239889 sc-eQTL 7.64e-01 0.0456 0.151 0.895 cDC L2
ENSG00000285079 AL513493.1 -43486 sc-eQTL 5.46e-01 -0.0329 0.0544 0.895 cDC L2
ENSG00000116678 LEPR 239824 sc-eQTL 4.63e-01 -0.105 0.143 0.891 cMono_IL1B L2
ENSG00000162433 AK4 512927 sc-eQTL 7.07e-01 0.0495 0.132 0.891 cMono_IL1B L2
ENSG00000162434 JAK1 592722 sc-eQTL 4.37e-01 -0.0932 0.12 0.891 cMono_IL1B L2
ENSG00000184588 PDE4B -132038 sc-eQTL 1.04e-01 0.108 0.066 0.891 cMono_IL1B L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.93e-01 -0.126 0.0964 0.891 cMono_IL1B L2
ENSG00000116678 LEPR 239824 sc-eQTL 8.71e-01 0.0228 0.141 0.891 cMono_S100A L2
ENSG00000162433 AK4 512927 sc-eQTL 4.82e-01 0.094 0.133 0.891 cMono_S100A L2
ENSG00000162434 JAK1 592722 sc-eQTL 7.41e-01 0.0409 0.123 0.891 cMono_S100A L2
ENSG00000184588 PDE4B -132038 sc-eQTL 7.50e-02 0.124 0.0693 0.891 cMono_S100A L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.57e-01 -0.163 0.115 0.891 cMono_S100A L2
ENSG00000162434 JAK1 592722 sc-eQTL 2.58e-01 -0.202 0.177 0.897 gdT L2
ENSG00000162437 RAVER2 915381 sc-eQTL 2.57e-01 -0.178 0.156 0.897 gdT L2
ENSG00000184588 PDE4B -132038 sc-eQTL 8.83e-02 0.176 0.103 0.897 gdT L2
ENSG00000213625 LEPROT 239889 sc-eQTL 9.85e-01 0.00353 0.188 0.897 gdT L2
ENSG00000116678 LEPR 239824 sc-eQTL 3.57e-01 0.133 0.144 0.898 intMono L2
ENSG00000162433 AK4 512927 sc-eQTL 2.14e-01 0.168 0.135 0.898 intMono L2
ENSG00000162434 JAK1 592722 sc-eQTL 6.32e-02 -0.232 0.124 0.898 intMono L2
ENSG00000184588 PDE4B -132038 sc-eQTL 9.61e-02 0.12 0.072 0.898 intMono L2
ENSG00000213625 LEPROT 239889 sc-eQTL 1.09e-01 -0.193 0.12 0.898 intMono L2
ENSG00000116678 LEPR 239824 sc-eQTL 3.23e-01 -0.139 0.14 0.896 ncMono L2
ENSG00000162433 AK4 512927 sc-eQTL 4.83e-01 -0.0881 0.125 0.896 ncMono L2
ENSG00000162434 JAK1 592722 sc-eQTL 4.89e-01 -0.0703 0.101 0.896 ncMono L2
ENSG00000184588 PDE4B -132038 sc-eQTL 3.56e-01 0.0746 0.0805 0.896 ncMono L2
ENSG00000213625 LEPROT 239889 sc-eQTL 7.86e-01 -0.0392 0.144 0.896 ncMono L2
ENSG00000116678 LEPR 239824 sc-eQTL 8.98e-02 -0.244 0.143 0.887 pDC L2
ENSG00000162433 AK4 512927 sc-eQTL 9.32e-01 -0.00804 0.0939 0.887 pDC L2
ENSG00000162434 JAK1 592722 sc-eQTL 5.87e-01 -0.0682 0.125 0.887 pDC L2
ENSG00000162437 RAVER2 915381 sc-eQTL 4.91e-01 0.0973 0.141 0.887 pDC L2
ENSG00000184588 PDE4B -132038 sc-eQTL 4.05e-01 0.0912 0.109 0.887 pDC L2
ENSG00000213625 LEPROT 239889 sc-eQTL 6.77e-01 0.065 0.155 0.887 pDC L2
ENSG00000285079 AL513493.1 -43486 sc-eQTL 6.75e-04 -0.393 0.113 0.887 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 592722 sc-eQTL 8.61e-01 0.0195 0.112 0.891 B_Memory LOneK1K
ENSG00000184588 PDE4B -132038 sc-eQTL 1.27e-01 0.14 0.0911 0.891 B_Memory LOneK1K
ENSG00000213625 LEPROT 239889 sc-eQTL 6.78e-01 -0.0594 0.143 0.891 B_Memory LOneK1K
ENSG00000162434 JAK1 592722 sc-eQTL 9.18e-01 -0.0109 0.107 0.891 B_Naive LOneK1K
ENSG00000184588 PDE4B -132038 sc-eQTL 8.56e-04 0.315 0.0932 0.891 B_Naive LOneK1K
ENSG00000213625 LEPROT 239889 sc-eQTL 7.90e-01 0.0359 0.135 0.891 B_Naive LOneK1K
ENSG00000116678 LEPR 239824 sc-eQTL 5.46e-01 -0.0838 0.139 0.891 CD14_Mono LOneK1K
ENSG00000162433 AK4 512927 sc-eQTL 6.73e-01 0.0562 0.133 0.891 CD14_Mono LOneK1K
ENSG00000162434 JAK1 592722 sc-eQTL 6.39e-01 -0.0522 0.111 0.891 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -132038 sc-eQTL 1.07e-01 0.0912 0.0564 0.891 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 239889 sc-eQTL 5.06e-02 -0.182 0.0924 0.891 CD14_Mono LOneK1K
ENSG00000116678 LEPR 239824 sc-eQTL 7.15e-01 -0.0528 0.144 0.892 CD16_Mono LOneK1K
ENSG00000162433 AK4 512927 sc-eQTL 2.50e-01 0.15 0.13 0.892 CD16_Mono LOneK1K
ENSG00000162434 JAK1 592722 sc-eQTL 1.35e-01 -0.131 0.0876 0.892 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -132038 sc-eQTL 3.31e-01 0.0654 0.0671 0.892 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 239889 sc-eQTL 7.72e-01 -0.0355 0.123 0.892 CD16_Mono LOneK1K
ENSG00000116678 LEPR 239824 sc-eQTL 4.15e-01 0.116 0.142 0.892 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 592722 sc-eQTL 5.87e-01 -0.0362 0.0666 0.892 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -132038 sc-eQTL 8.93e-03 0.268 0.102 0.892 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 239889 sc-eQTL 5.52e-02 -0.282 0.146 0.892 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116678 LEPR 239824 pQTL 0.000879 -0.142 0.0426 0.00704 0.00528 0.125

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina