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Genes within 1Mb (chr1:65654652:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 586898 sc-eQTL 9.42e-01 0.0061 0.0831 0.88 B L1
ENSG00000184588 PDE4B -137862 sc-eQTL 2.47e-02 0.194 0.0858 0.88 B L1
ENSG00000213625 LEPROT 234065 sc-eQTL 4.38e-01 -0.0824 0.106 0.88 B L1
ENSG00000162434 JAK1 586898 sc-eQTL 8.01e-01 -0.0206 0.0815 0.88 CD4T L1
ENSG00000184588 PDE4B -137862 sc-eQTL 5.07e-02 0.189 0.0963 0.88 CD4T L1
ENSG00000213625 LEPROT 234065 sc-eQTL 4.15e-01 -0.104 0.127 0.88 CD4T L1
ENSG00000116678 LEPR 234000 sc-eQTL 3.75e-01 0.122 0.137 0.88 CD8T L1
ENSG00000162434 JAK1 586898 sc-eQTL 2.62e-01 -0.119 0.106 0.88 CD8T L1
ENSG00000184588 PDE4B -137862 sc-eQTL 1.12e-02 0.229 0.0895 0.88 CD8T L1
ENSG00000213625 LEPROT 234065 sc-eQTL 5.49e-01 -0.0847 0.141 0.88 CD8T L1
ENSG00000116678 LEPR 234000 sc-eQTL 4.78e-01 -0.0965 0.136 0.881 DC L1
ENSG00000162433 AK4 507103 sc-eQTL 7.57e-01 -0.0354 0.114 0.881 DC L1
ENSG00000162434 JAK1 586898 sc-eQTL 3.66e-01 -0.0861 0.0949 0.881 DC L1
ENSG00000162437 RAVER2 909557 sc-eQTL 8.41e-02 0.21 0.121 0.881 DC L1
ENSG00000184588 PDE4B -137862 sc-eQTL 6.40e-02 0.136 0.0731 0.881 DC L1
ENSG00000213625 LEPROT 234065 sc-eQTL 2.27e-01 -0.163 0.134 0.881 DC L1
ENSG00000285079 AL513493.1 -49310 sc-eQTL 3.97e-04 -0.254 0.0704 0.881 DC L1
ENSG00000116678 LEPR 234000 sc-eQTL 1.67e-01 -0.186 0.134 0.88 Mono L1
ENSG00000162433 AK4 507103 sc-eQTL 9.88e-01 -0.00185 0.123 0.88 Mono L1
ENSG00000162434 JAK1 586898 sc-eQTL 5.22e-01 -0.0565 0.088 0.88 Mono L1
ENSG00000184588 PDE4B -137862 sc-eQTL 4.13e-01 0.04 0.0487 0.88 Mono L1
ENSG00000213625 LEPROT 234065 sc-eQTL 2.08e-01 -0.11 0.0869 0.88 Mono L1
ENSG00000116678 LEPR 234000 sc-eQTL 8.19e-01 -0.0299 0.131 0.88 NK L1
ENSG00000162434 JAK1 586898 sc-eQTL 3.51e-01 -0.0576 0.0616 0.88 NK L1
ENSG00000184588 PDE4B -137862 sc-eQTL 1.54e-03 0.264 0.0823 0.88 NK L1
ENSG00000213625 LEPROT 234065 sc-eQTL 5.88e-02 -0.266 0.14 0.88 NK L1
ENSG00000162434 JAK1 586898 sc-eQTL 2.41e-02 -0.199 0.0876 0.88 Other_T L1
ENSG00000162437 RAVER2 909557 sc-eQTL 4.82e-02 -0.254 0.128 0.88 Other_T L1
ENSG00000184588 PDE4B -137862 sc-eQTL 4.06e-01 0.0801 0.0962 0.88 Other_T L1
ENSG00000213625 LEPROT 234065 sc-eQTL 9.66e-01 0.00586 0.139 0.88 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 586898 sc-eQTL 2.42e-01 -0.174 0.148 0.888 B_Activated L2
ENSG00000184588 PDE4B -137862 sc-eQTL 7.40e-01 0.0394 0.118 0.888 B_Activated L2
ENSG00000213625 LEPROT 234065 sc-eQTL 2.50e-01 0.179 0.155 0.888 B_Activated L2
ENSG00000162434 JAK1 586898 sc-eQTL 2.99e-01 0.124 0.119 0.882 B_Intermediate L2
ENSG00000184588 PDE4B -137862 sc-eQTL 5.79e-02 0.184 0.0965 0.882 B_Intermediate L2
ENSG00000213625 LEPROT 234065 sc-eQTL 7.71e-01 -0.0409 0.14 0.882 B_Intermediate L2
ENSG00000162434 JAK1 586898 sc-eQTL 8.11e-01 -0.0288 0.12 0.879 B_Memory L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.40e-01 0.181 0.122 0.879 B_Memory L2
ENSG00000213625 LEPROT 234065 sc-eQTL 6.45e-01 -0.0644 0.139 0.879 B_Memory L2
ENSG00000162434 JAK1 586898 sc-eQTL 7.98e-01 -0.027 0.105 0.88 B_Naive1 L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.45e-03 0.32 0.0992 0.88 B_Naive1 L2
ENSG00000213625 LEPROT 234065 sc-eQTL 7.65e-01 0.0412 0.137 0.88 B_Naive1 L2
ENSG00000162434 JAK1 586898 sc-eQTL 6.67e-01 0.0481 0.112 0.88 B_Naive2 L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.80e-02 0.208 0.0871 0.88 B_Naive2 L2
ENSG00000213625 LEPROT 234065 sc-eQTL 4.42e-01 -0.104 0.134 0.88 B_Naive2 L2
ENSG00000162434 JAK1 586898 sc-eQTL 1.80e-01 -0.17 0.126 0.88 CD4_CTL L2
ENSG00000184588 PDE4B -137862 sc-eQTL 8.81e-02 0.191 0.111 0.88 CD4_CTL L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.72e-01 0.0236 0.146 0.88 CD4_CTL L2
ENSG00000162434 JAK1 586898 sc-eQTL 8.42e-01 0.0159 0.0795 0.88 CD4_Naive L2
ENSG00000184588 PDE4B -137862 sc-eQTL 3.80e-02 0.206 0.0985 0.88 CD4_Naive L2
ENSG00000213625 LEPROT 234065 sc-eQTL 4.78e-01 -0.0915 0.129 0.88 CD4_Naive L2
ENSG00000162434 JAK1 586898 sc-eQTL 8.89e-01 0.0127 0.0907 0.88 CD4_TCM L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.50e-03 0.293 0.102 0.88 CD4_TCM L2
ENSG00000213625 LEPROT 234065 sc-eQTL 5.36e-01 -0.0816 0.131 0.88 CD4_TCM L2
ENSG00000162434 JAK1 586898 sc-eQTL 7.96e-02 -0.211 0.12 0.88 CD4_TEM L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.34e-01 0.167 0.111 0.88 CD4_TEM L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.47e-01 -0.0277 0.143 0.88 CD4_TEM L2
ENSG00000116678 LEPR 234000 sc-eQTL 4.88e-02 0.268 0.135 0.88 CD8_CTL L2
ENSG00000162434 JAK1 586898 sc-eQTL 1.20e-01 -0.178 0.114 0.88 CD8_CTL L2
ENSG00000184588 PDE4B -137862 sc-eQTL 3.05e-02 0.228 0.105 0.88 CD8_CTL L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.25e-01 0.0309 0.14 0.88 CD8_CTL L2
ENSG00000116678 LEPR 234000 sc-eQTL 7.44e-01 0.0441 0.135 0.88 CD8_Naive L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.58e-01 -0.103 0.112 0.88 CD8_Naive L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.96e-02 0.185 0.0935 0.88 CD8_Naive L2
ENSG00000213625 LEPROT 234065 sc-eQTL 1.63e-01 -0.192 0.137 0.88 CD8_Naive L2
ENSG00000116678 LEPR 234000 sc-eQTL 4.32e-01 -0.107 0.136 0.88 CD8_TCM L2
ENSG00000162434 JAK1 586898 sc-eQTL 9.07e-01 0.0138 0.119 0.88 CD8_TCM L2
ENSG00000184588 PDE4B -137862 sc-eQTL 6.65e-01 0.0565 0.13 0.88 CD8_TCM L2
ENSG00000213625 LEPROT 234065 sc-eQTL 6.52e-01 0.0668 0.148 0.88 CD8_TCM L2
ENSG00000116678 LEPR 234000 sc-eQTL 9.97e-01 0.000433 0.123 0.879 CD8_TEM L2
ENSG00000162434 JAK1 586898 sc-eQTL 9.64e-02 0.23 0.138 0.879 CD8_TEM L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.78e-02 0.233 0.117 0.879 CD8_TEM L2
ENSG00000213625 LEPROT 234065 sc-eQTL 1.20e-01 -0.222 0.142 0.879 CD8_TEM L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.37e-01 -0.116 0.12 0.879 MAIT L2
ENSG00000162437 RAVER2 909557 sc-eQTL 3.42e-01 -0.122 0.128 0.879 MAIT L2
ENSG00000184588 PDE4B -137862 sc-eQTL 3.39e-01 0.0986 0.103 0.879 MAIT L2
ENSG00000213625 LEPROT 234065 sc-eQTL 6.33e-01 0.0663 0.139 0.879 MAIT L2
ENSG00000116678 LEPR 234000 sc-eQTL 2.35e-02 -0.294 0.129 0.88 NK_CD56bright L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.19e-01 -0.089 0.0891 0.88 NK_CD56bright L2
ENSG00000184588 PDE4B -137862 sc-eQTL 2.28e-03 0.324 0.105 0.88 NK_CD56bright L2
ENSG00000213625 LEPROT 234065 sc-eQTL 4.06e-01 -0.122 0.146 0.88 NK_CD56bright L2
ENSG00000116678 LEPR 234000 sc-eQTL 5.35e-01 0.0856 0.138 0.881 NK_CD56dim L2
ENSG00000162434 JAK1 586898 sc-eQTL 5.22e-01 -0.0461 0.072 0.881 NK_CD56dim L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.41e-02 0.257 0.104 0.881 NK_CD56dim L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.33e-01 -0.0307 0.146 0.881 NK_CD56dim L2
ENSG00000116678 LEPR 234000 sc-eQTL 7.82e-01 -0.0332 0.12 0.879 NK_HLA L2
ENSG00000162434 JAK1 586898 sc-eQTL 2.00e-01 -0.12 0.093 0.879 NK_HLA L2
ENSG00000184588 PDE4B -137862 sc-eQTL 2.51e-01 0.131 0.113 0.879 NK_HLA L2
ENSG00000213625 LEPROT 234065 sc-eQTL 3.89e-01 0.125 0.145 0.879 NK_HLA L2
ENSG00000116678 LEPR 234000 sc-eQTL 7.14e-01 -0.0491 0.134 0.881 NK_cytokine L2
ENSG00000162434 JAK1 586898 sc-eQTL 5.06e-01 -0.0519 0.0779 0.881 NK_cytokine L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.82e-02 0.287 0.121 0.881 NK_cytokine L2
ENSG00000213625 LEPROT 234065 sc-eQTL 7.93e-05 -0.55 0.137 0.881 NK_cytokine L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.84e-01 -0.108 0.123 0.867 PB L2
ENSG00000184588 PDE4B -137862 sc-eQTL 7.92e-01 -0.0414 0.157 0.867 PB L2
ENSG00000213625 LEPROT 234065 sc-eQTL 2.02e-01 -0.22 0.172 0.867 PB L2
ENSG00000162434 JAK1 586898 sc-eQTL 9.50e-01 -0.00568 0.0902 0.88 Pro_T L2
ENSG00000162437 RAVER2 909557 sc-eQTL 2.12e-01 -0.149 0.119 0.88 Pro_T L2
ENSG00000184588 PDE4B -137862 sc-eQTL 8.84e-01 0.0161 0.111 0.88 Pro_T L2
ENSG00000213625 LEPROT 234065 sc-eQTL 7.53e-01 0.0442 0.14 0.88 Pro_T L2
ENSG00000162434 JAK1 586898 sc-eQTL 6.15e-02 -0.212 0.113 0.88 Treg L2
ENSG00000184588 PDE4B -137862 sc-eQTL 8.72e-01 0.0167 0.104 0.88 Treg L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.37e-01 -0.0302 0.147 0.88 Treg L2
ENSG00000116678 LEPR 234000 sc-eQTL 4.21e-01 -0.114 0.142 0.883 cDC L2
ENSG00000162433 AK4 507103 sc-eQTL 3.92e-01 0.107 0.125 0.883 cDC L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.42e-01 -0.111 0.117 0.883 cDC L2
ENSG00000162437 RAVER2 909557 sc-eQTL 1.93e-01 0.167 0.128 0.883 cDC L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.14e-01 0.124 0.078 0.883 cDC L2
ENSG00000213625 LEPROT 234065 sc-eQTL 8.79e-01 -0.0217 0.143 0.883 cDC L2
ENSG00000285079 AL513493.1 -49310 sc-eQTL 6.49e-01 -0.0234 0.0512 0.883 cDC L2
ENSG00000116678 LEPR 234000 sc-eQTL 2.54e-01 -0.155 0.136 0.88 cMono_IL1B L2
ENSG00000162433 AK4 507103 sc-eQTL 9.69e-01 -0.00486 0.125 0.88 cMono_IL1B L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.78e-01 -0.1 0.114 0.88 cMono_IL1B L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.03e-01 0.103 0.0628 0.88 cMono_IL1B L2
ENSG00000213625 LEPROT 234065 sc-eQTL 1.79e-01 -0.124 0.0917 0.88 cMono_IL1B L2
ENSG00000116678 LEPR 234000 sc-eQTL 9.71e-01 0.00495 0.134 0.88 cMono_S100A L2
ENSG00000162433 AK4 507103 sc-eQTL 4.18e-01 0.103 0.127 0.88 cMono_S100A L2
ENSG00000162434 JAK1 586898 sc-eQTL 9.06e-01 0.0139 0.117 0.88 cMono_S100A L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.43e-02 0.133 0.0656 0.88 cMono_S100A L2
ENSG00000213625 LEPROT 234065 sc-eQTL 3.06e-01 -0.112 0.109 0.88 cMono_S100A L2
ENSG00000162434 JAK1 586898 sc-eQTL 9.46e-02 -0.274 0.163 0.885 gdT L2
ENSG00000162437 RAVER2 909557 sc-eQTL 2.47e-01 -0.168 0.144 0.885 gdT L2
ENSG00000184588 PDE4B -137862 sc-eQTL 6.57e-02 0.176 0.0948 0.885 gdT L2
ENSG00000213625 LEPROT 234065 sc-eQTL 9.49e-01 0.0112 0.174 0.885 gdT L2
ENSG00000116678 LEPR 234000 sc-eQTL 3.77e-01 0.121 0.136 0.887 intMono L2
ENSG00000162433 AK4 507103 sc-eQTL 6.61e-01 0.0566 0.129 0.887 intMono L2
ENSG00000162434 JAK1 586898 sc-eQTL 3.72e-02 -0.247 0.118 0.887 intMono L2
ENSG00000184588 PDE4B -137862 sc-eQTL 1.20e-01 0.107 0.0684 0.887 intMono L2
ENSG00000213625 LEPROT 234065 sc-eQTL 1.52e-01 -0.164 0.114 0.887 intMono L2
ENSG00000116678 LEPR 234000 sc-eQTL 4.40e-01 -0.102 0.133 0.885 ncMono L2
ENSG00000162433 AK4 507103 sc-eQTL 4.95e-01 -0.0808 0.118 0.885 ncMono L2
ENSG00000162434 JAK1 586898 sc-eQTL 5.52e-01 -0.057 0.0957 0.885 ncMono L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.68e-01 0.0553 0.076 0.885 ncMono L2
ENSG00000213625 LEPROT 234065 sc-eQTL 7.56e-01 0.0423 0.136 0.885 ncMono L2
ENSG00000116678 LEPR 234000 sc-eQTL 1.30e-01 -0.204 0.134 0.873 pDC L2
ENSG00000162433 AK4 507103 sc-eQTL 8.72e-01 0.0142 0.0879 0.873 pDC L2
ENSG00000162434 JAK1 586898 sc-eQTL 8.16e-01 -0.0274 0.117 0.873 pDC L2
ENSG00000162437 RAVER2 909557 sc-eQTL 2.45e-01 0.154 0.132 0.873 pDC L2
ENSG00000184588 PDE4B -137862 sc-eQTL 4.27e-01 0.0815 0.102 0.873 pDC L2
ENSG00000213625 LEPROT 234065 sc-eQTL 3.22e-01 0.144 0.145 0.873 pDC L2
ENSG00000285079 AL513493.1 -49310 sc-eQTL 2.43e-04 -0.396 0.105 0.873 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 586898 sc-eQTL 6.13e-01 0.0536 0.106 0.88 B_Memory LOneK1K
ENSG00000184588 PDE4B -137862 sc-eQTL 1.43e-01 0.127 0.0865 0.88 B_Memory LOneK1K
ENSG00000213625 LEPROT 234065 sc-eQTL 5.55e-01 -0.0803 0.136 0.88 B_Memory LOneK1K
ENSG00000162434 JAK1 586898 sc-eQTL 8.56e-01 -0.0185 0.102 0.88 B_Naive LOneK1K
ENSG00000184588 PDE4B -137862 sc-eQTL 1.43e-03 0.288 0.089 0.88 B_Naive LOneK1K
ENSG00000213625 LEPROT 234065 sc-eQTL 8.57e-01 0.0231 0.128 0.88 B_Naive LOneK1K
ENSG00000116678 LEPR 234000 sc-eQTL 3.24e-01 -0.13 0.132 0.88 CD14_Mono LOneK1K
ENSG00000162433 AK4 507103 sc-eQTL 7.96e-01 0.0326 0.126 0.88 CD14_Mono LOneK1K
ENSG00000162434 JAK1 586898 sc-eQTL 5.12e-01 -0.0695 0.106 0.88 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -137862 sc-eQTL 9.95e-02 0.0887 0.0536 0.88 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 234065 sc-eQTL 6.70e-02 -0.162 0.088 0.88 CD14_Mono LOneK1K
ENSG00000116678 LEPR 234000 sc-eQTL 7.83e-01 -0.0378 0.137 0.881 CD16_Mono LOneK1K
ENSG00000162433 AK4 507103 sc-eQTL 7.25e-01 0.0437 0.124 0.881 CD16_Mono LOneK1K
ENSG00000162434 JAK1 586898 sc-eQTL 1.22e-01 -0.129 0.0831 0.881 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -137862 sc-eQTL 4.64e-01 0.0468 0.0638 0.881 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 234065 sc-eQTL 8.01e-01 0.0294 0.117 0.881 CD16_Mono LOneK1K
ENSG00000116678 LEPR 234000 sc-eQTL 7.91e-01 0.0356 0.134 0.881 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 586898 sc-eQTL 3.35e-01 -0.0607 0.0629 0.881 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -137862 sc-eQTL 1.25e-02 0.243 0.0963 0.881 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 234065 sc-eQTL 2.60e-02 -0.309 0.138 0.881 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116678 LEPR 234000 pQTL 0.0138 -0.0993 0.0403 0.00155 0.0 0.142

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina